Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0010320

Physical Location & Seq

Genomic Coordinates Reverse (-)

47623265 .. 47631833

Gene Structure 8569 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00365910.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2100 bp

ATGAATTCCATTGCCTCCATGATTGTTAGGCTGGCATCGACGTTGTCTTTGAAGGACAAGGAGGAATCCATTGATCTTGGCGATCTGAGGAAGAAAGGAAATGAGTTTGTGGCCAATTATTCCTATATGGTGGGACAGCTTAACACATGCAGAGCTTTCAATCACCATTCTTTCATGGGGGCTTTTCAATCAGTGTGGAGATTGAATGGGACTTTGCATGTGCAGGAAAGCTCGGAGGGGATATTTCTTTTCACATTCAGTAATGCAGTGTCTTTGATTGGCGAGACTATTGGCCGGGTCTTGGAGGTGGATAAACAAGGGTTGCATGAAGGAAGAGTTAAGGCTAAGACGAAGGTGGATACTCGAAAGGGAAAAGGAAGGCCTGGATTTCTGATACAACAATTATTATTTATGCTTTGGACAAAATCTCGTTATCTTGATAACCTAAGGAAGAAGAAGCGAAAGCGTTGGTTAGCGAAGCACTTGAAAAAAATGAAGGGGAAAATTCCTGAAATTGCTAGCTCCCATGTTTCTTCCCGTGTTCTGCAGACTTGTGTTAAGTACTGCACGAAAGCAGAAAGGGATGCAAAAAAGAAAAAAGCGGACGGGGATGCAAAAAAGAGAAAAGCAGAAAAGGATGCAGTATTTGAGGAGCTTAAGCCGCATTTTCTTACCCTTTCACGCAGTGCATATGGTGTTCATCTGGTGAAAAAGATGTTAGATAATGCCTCCAAACAGCAGCTTGCGGAGTTTATTTCGTCACTTCATGGACATGTTGCATCCCTTCTGCGTCACATGGTTGGATCTGTAGTCGTAGAGCATGCATACCAATTGGGAAATGCAACTCAAAAACAAGAACTTTTGGTGGAACTATATTCTACAGAACTACAGTTGTTTAAGGACTTGGTCTTGAAGAAAGAGGGAAGGTTAGTAGATATAATATCAAAGTTAGATCTGCAGAAATCTTCAGTCCTGAAGCACATGACTTCGGTGATTCAACCAATTTTAGAGAAAGGAATAGTTGACCACTCTATATTACATAGGGTGTTGATAGAGTACTTCACCATAGCTGAAGAGTTCTCTGCCACAGATGTCATTAAACAGTTGTCAGGTCCTCTTCTTGTCCGAATGATTCATACAAGGGATGGATCTAGGGTTGGAATGCTCTGTGTCAAGCATGGCAGTGCAAAGGAAAGAAAGAAGATAATCAAAGGAATGAAAGGCCACATACGTAATATAGCTGGTGATCAATGTGGAAGTATGGTGCTTGTTTCTCTTGTTTCAGTTGTTGATGACACGAAGCTTATTACAAAGGTTGTCATTAATGAGCTTCAAGAACATTTAAAGGATCTTGTTTTTGATAAGGATGGAAGGCGTCCGTTGCTACAGCTACTTCATCCAAATTGTTCACGCTATTTGACTCCCTATGACCTGGCTTCTCTCAGTTTGTCTATCCCTTCTTTATCCAACAAGGTTGAGTCAGACATCCCTTCTGAAGGGATGGAAACTGAAACTAATGATCCTGATGAGAGTACCCAATTAGTTGATGGTGGAAAAAAAGATCCTTCAGTTCGAAGGCAAGAACTGTTAGTCAAGAGTGGGCTTGCTGAGAGGCTAGTTGATGTATGCATTGCAAGTGCAGGGGAGTTGCTTAGATCAAACTTTGGCAAAGAAGTCATGTATGAGGTTGCAACTGGGGGTGCTGATGGAATCCTCCACCCAACTTTGGATGACAAGTTGAATGAACTATATGAAGCTGTAGCAACTCTTGTTGCAGAGCCCAAATCCGAAGAACCAAAAGAAGAACACCTCCTTGAAAATTTCCATTCTAGTCGGACCATTAGAAGACTAATCTTGGATTGCCCTGCATTCGCTTCCACTCTGTGGAATAAGGCACTGAAAGGGAAATGTGAATTGTGGGCGCAAGGTCACAGCTGTAGGGTAGTCTCTGCATTCTTAGCATCTTCAGACTCTAAGGTAAATAAGCTGGCAAAGAAGGAGTTGCAGCCACTGATAGATGCTGGTACCCTGAAAGTCCCGAGATGCGAGCAGCCATTGGAACCAAGGAATGAAGAAATAGAAATCCAGAATTTTGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006417 GO:0007275 GO:0008150 GO:0009790 GO:0009791 GO:0009793 GO:0009889 GO:0010154 GO:0010468 GO:0010556 GO:0010608 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032268 GO:0032501 GO:0032502 GO:0034248 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051246 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0080090 GO:0097159 GO:1901363 GO:2000112

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CPL zf-XS

Protein Analysis

699

Amino Acids

78.29

Weight (kDa)

9.2

Isoelectric Point (pI)

35.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PUF_NOP9	PF22493	221 - 458	1.2e-08	NOP9-like PUF repeat domain
CPL	PF08144	519 - 618	3.6e-08	CPL (NUC119) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010320)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16810
fragaria_vesca	FvH4_4g18900 FvH4_4g18900
malus_domestica	MD13G1162200.v1.1 MD16G1162000.v1.1
prunus_persica	Prupe.1G129500_v2.0.a1
pyrus_communis	pycom13g13840 pycom16g13730 pycom16g13740
rosa_chinensis	RchiOBHm_Chr4g0423801
rosa_laevigata	RLG00000007532
rosa_multiflora	Rmu_co8056970.1_g000001 Rmu_sc0003369.1_g000020
rosa_roxburghii	Rroxscaffold_5G00365910
rosa_rugosa	Rorug04G0190800
rosa_samantha	Rh4AG250200 Rh4BG255400 Rh4CG064700 Rh4CG263400 Rh4DG249700
rosa_wichuraiana	Rw4G021420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	2024
AccB1I	GGYRCC	1 cut(s)	2024
AccB7I	CCANNNNNTGG	1 cut(s)	1884
AciI	CCGC	3 cut(s)	602, 662, 746
AclWI	GGATC	5 cut(s)	811, 1156, 1356, 1514, 1556
AcoI	YGGCCR	2 cut(s)	111, 292
AcsI	RAATTY	4 cut(s)	4, 504, 1819, 2089
AcuI	CTGAAG	6 cut(s)	951, 995, 1092, 1515, 1551, 1950
AcyI	GRCGYC	1 cut(s)	1375
AdeI	CACNNNGTG	2 cut(s)	686, 1884
AfaI	GTAC	4 cut(s)	563, 1058, 1534, 2026
AfiI	CCNNNNNNNGG	4 cut(s)	301, 1496, 1726, 1884
AflII	CTTAAG	1 cut(s)	656
AflIII	ACRYGT	1 cut(s)	772
AjnI	CCWGG	2 cut(s)	382, 1431
Alw26I	GTCTC	2 cut(s)	278, 1951
AlwI	GGATC	5 cut(s)	811, 1156, 1356, 1514, 1556
AlwNI	CAGNNNCTG	1 cut(s)	2011
Ama87I	CYCGRG	1 cut(s)	2038
AoxI	GGCC	4 cut(s)	111, 292, 380, 1222
ApeKI	GCWGC	3 cut(s)	739, 2005, 2050
ApoI	RAATTY	4 cut(s)	4, 504, 1819, 2089
ArsI	GACNNNNNNTTYG	2 cut(s)	31, 63
AseI	ATTAAT	1 cut(s)	1323
Asp718I	GGTACC	1 cut(s)	2024
AspLEI	GCGC	1 cut(s)	1924
AspS9I	GGNCC	2 cut(s)	1112, 1836
AsuC2I	CCSGG	1 cut(s)	296
AsuHPI	GGTGA	5 cut(s)	155, 718, 1003, 1054, 1256
AsuII	TTCGAA	1 cut(s)	1573
AsuNHI	GCTAGC	1 cut(s)	518
AvaI	CYCGRG	1 cut(s)	2038
AvaII	GGWCC	2 cut(s)	1112, 1836
AxyI	CCTNAGG	1 cut(s)	446
BalI	TGGCCA	1 cut(s)	113
BanI	GGYRCC	1 cut(s)	2024
BanII	GRGCYC	1 cut(s)	1782
BbsI	GAAGAC	1 cut(s)	1852
BbvI	GCAGC	3 cut(s)	751, 2017, 2062
BccI	CCATC	5 cut(s)	1139, 1361, 1495, 1541, 1700
BciT130I	CCWGG	2 cut(s)	384, 1433
BciVI	GTATCC	1 cut(s)	352
BclI	TGATCA	1 cut(s)	1246
BcnI	CCSGG	1 cut(s)	296
BcoDI	GTCTC	2 cut(s)	278, 1951
BfaI	CTAG	4 cut(s)	519, 1152, 1616, 1830
BfmI	CTRYAG	8 cut(s)	545, 807, 879, 887, 956, 1385, 1758, 1936
BfrI	CTTAAG	1 cut(s)	656
BfuI	GTATCC	1 cut(s)	352
BglII	AGATCT	1 cut(s)	952
BisI	GCNGC	4 cut(s)	662, 740, 2006, 2051
BlsI	GCNGC	4 cut(s)	663, 741, 2007, 2052
BmcAI	AGTACT	2 cut(s)	563, 1058
Bme1390I	CCNGG	3 cut(s)	296, 384, 1433
Bme18I	GGWCC	2 cut(s)	1112, 1836
BmeT110I	CYCGRG	1 cut(s)	2038
BmgT120I	GGNCC	2 cut(s)	1112, 1836
BmiI	GGNNCC	2 cut(s)	2026, 2061
BmrFI	CCNGG	3 cut(s)	296, 384, 1433
BmrI	ACTGGG	1 cut(s)	1704
BmsI	GCATC	8 cut(s)	44, 574, 601, 628, 788, 1970, 2008, 2033
BmtI	GCTAGC	1 cut(s)	522
BmuI	ACTGGG	1 cut(s)	1704
BpiI	GAAGAC	1 cut(s)	1852
Bpu14I	TTCGAA	1 cut(s)	1573
BpuMI	CCSGG	1 cut(s)	296
BsaAI	YACGTR	1 cut(s)	1232
BsaHI	GRCGYC	1 cut(s)	1375
BsaJI	CCNNGG	1 cut(s)	2063
Bsc4I	CCNNNNNNNGG	4 cut(s)	301, 1496, 1726, 1884
Bse1I	ACTGG	1 cut(s)	1699
Bse21I	CCTNAGG	1 cut(s)	446
Bse3DI	GCAATG	2 cut(s)	9, 1629
BseBI	CCWGG	2 cut(s)	384, 1433
BseDI	CCNNGG	1 cut(s)	2063
BseLI	CCNNNNNNNGG	4 cut(s)	301, 1496, 1726, 1884
BseMI	GCAATG	2 cut(s)	9, 1629
BseMII	CTCAG	3 cut(s)	77, 1456, 1599
BseNI	ACTGG	1 cut(s)	1699
BseRI	GAGGAG	1 cut(s)	665
BseXI	GCAGC	3 cut(s)	751, 2017, 2062
BsgI	GTGCAG	3 cut(s)	242, 550, 1659
BshFI	GGCC	4 cut(s)	113, 294, 382, 1224
BshNI	GGYRCC	1 cut(s)	2024
BsiHKCI	CYCGRG	1 cut(s)	2038
BsiSI	CCGG	1 cut(s)	295
BslFI	GGGAC	3 cut(s)	147, 223, 2021
BslI	CCNNNNNNNGG	4 cut(s)	301, 1496, 1726, 1884
BsmAI	GTCTC	2 cut(s)	278, 1951
BsmFI	GGGAC	3 cut(s)	147, 223, 2021
BsmI	GAATGC	3 cut(s)	1167, 1868, 1952
BsnI	GGCC	4 cut(s)	113, 294, 382, 1224
BsoBI	CYCGRG	1 cut(s)	2038
Bsp119I	TTCGAA	1 cut(s)	1573
Bsp1286I	GDGCHC	1 cut(s)	1782
BspACI	CCGC	3 cut(s)	602, 662, 746
BspANI	GGCC	4 cut(s)	113, 294, 382, 1224
BspCNI	CTCAG	3 cut(s)	78, 1455, 1600
BspLI	GGNNCC	2 cut(s)	2026, 2061
BspMAI	CTGCAG	2 cut(s)	549, 960
BspOI	GCTAGC	1 cut(s)	522
BspPI	GGATC	5 cut(s)	811, 1156, 1356, 1514, 1556
BspT104I	TTCGAA	1 cut(s)	1573
BspT107I	GGYRCC	1 cut(s)	2024
BspTI	CTTAAG	1 cut(s)	656
BsrDI	GCAATG	2 cut(s)	9, 1629
BsrI	ACTGG	1 cut(s)	1699
BssECI	CCNNGG	1 cut(s)	2063
BssNI	GRCGYC	1 cut(s)	1375
BssT1I	CCWWGG	1 cut(s)	2063
Bst2UI	CCWGG	2 cut(s)	384, 1433
Bst4CI	ACNGT	3 cut(s)	891, 1104, 1587
Bst6I	CTCTTC	3 cut(s)	328, 1068, 1122
BstACI	GRCGYC	1 cut(s)	1375
BstAFI	CTTAAG	1 cut(s)	656
BstBAI	YACGTR	1 cut(s)	1232
BstBI	TTCGAA	1 cut(s)	1573
BstC8I	GCNNGC	7 cut(s)	33, 520, 744, 822, 1605, 1989, 2048
BstDEI	CTNAG	8 cut(s)	86, 345, 446, 1442, 1608, 1652, 1957, 1974
BstENI	CCTNNNNNAGG	1 cut(s)	1494
BstHHI	GCGC	1 cut(s)	1924
BstMAI	GTCTC	2 cut(s)	278, 1951
BstMWI	GCNNNNNNNGC	3 cut(s)	661, 1381, 1958
BstNI	CCWGG	2 cut(s)	384, 1433
BstNSI	RCATGY	4 cut(s)	150, 221, 776, 824
BstSCI	CCNGG	3 cut(s)	294, 382, 1431
BstSFI	CTRYAG	8 cut(s)	545, 807, 879, 887, 956, 1385, 1758, 1936
BstSNI	TACGTA	1 cut(s)	1232
BstV1I	GCAGC	3 cut(s)	751, 2017, 2062
BstV2I	GAAGAC	1 cut(s)	1852
BstX2I	RGATCY	5 cut(s)	803, 952, 1148, 1348, 1561
BstXI	CCANNNNNNTGG	1 cut(s)	2093
BstYI	RGATCY	5 cut(s)	803, 952, 1148, 1348, 1561
Bsu36I	CCTNAGG	1 cut(s)	446
BsuI	GTATCC	1 cut(s)	352
BsuRI	GGCC	4 cut(s)	113, 294, 382, 1224
BtsI	GCAGTG	3 cut(s)	273, 691, 1189
BtsIMutI	CAGTG	6 cut(s)	198, 273, 691, 1189, 1895, 2009
Cac8I	GCNNGC	7 cut(s)	33, 520, 744, 822, 1605, 1989, 2048
CaiI	CAGNNNCTG	1 cut(s)	2011
CfoI	GCGC	1 cut(s)	1924
Cfr13I	GGNCC	2 cut(s)	1112, 1836
CseI	GACGC	2 cut(s)	779, 1364
Csp6I	GTAC	4 cut(s)	562, 1057, 1533, 2025
CspCI	CAANNNNNGTGG	2 cut(s)	176, 211
CviQI	GTAC	4 cut(s)	562, 1057, 1533, 2025
DdeI	CTNAG	8 cut(s)	86, 345, 446, 1442, 1608, 1652, 1957, 1974
DraI	TTTAAA	1 cut(s)	1344
DraIII	CACNNNGTG	2 cut(s)	686, 1884
EaeI	YGGCCR	2 cut(s)	111, 292
Eam1104I	CTCTTC	3 cut(s)	328, 1068, 1122
EarI	CTCTTC	3 cut(s)	328, 1068, 1122
Eco105I	TACGTA	1 cut(s)	1232
Eco130I	CCWWGG	1 cut(s)	2063
Eco147I	AGGCCT	1 cut(s)	382
Eco24I	GRGCYC	1 cut(s)	1782
Eco47I	GGWCC	2 cut(s)	1112, 1836
Eco57I	CTGAAG	6 cut(s)	951, 995, 1092, 1515, 1551, 1950
Eco81I	CCTNAGG	1 cut(s)	446
Eco88I	CYCGRG	1 cut(s)	2038
EcoNI	CCTNNNNNAGG	1 cut(s)	1494
EcoO109I	RGGNCCY	1 cut(s)	1112
EcoRI	GAATTC	1 cut(s)	4
EcoRII	CCWGG	2 cut(s)	382, 1431
EcoT14I	CCWWGG	1 cut(s)	2063
EcoT22I	ATGCAT	2 cut(s)	826, 1631
EcoT38I	GRGCYC	1 cut(s)	1782
ErhI	CCWWGG	1 cut(s)	2063
FaqI	GGGAC	3 cut(s)	147, 223, 2021
FauNDI	CATATG	1 cut(s)	691
FbaI	TGATCA	1 cut(s)	1246
Fnu4HI	GCNGC	4 cut(s)	662, 740, 2006, 2051
FriOI	GRGCYC	1 cut(s)	1782
Fsp4HI	GCNGC	4 cut(s)	662, 740, 2006, 2051
FspBI	CTAG	4 cut(s)	519, 1152, 1616, 1830
GlaI	GCGC	1 cut(s)	1923
GluI	GCNGC	4 cut(s)	662, 740, 2006, 2051
HaeIII	GGCC	4 cut(s)	113, 294, 382, 1224
HapII	CCGG	1 cut(s)	295
HgaI	GACGC	2 cut(s)	779, 1364
HhaI	GCGC	1 cut(s)	1924
Hin1I	GRCGYC	1 cut(s)	1375
Hin6I	GCGC	1 cut(s)	1922
HinP1I	GCGC	1 cut(s)	1922
HincII	GTYRAC	1 cut(s)	1024
HindII	GTYRAC	1 cut(s)	1024
HindIII	AAGCTT	1 cut(s)	1301
HinfI	GANTC	7 cut(s)	65, 994, 1132, 1420, 1478, 1710, 1970
HpaII	CCGG	1 cut(s)	295
HphI	GGTGA	5 cut(s)	155, 718, 1003, 1054, 1256
Hpy166II	GTNNAC	2 cut(s)	1024, 1409
Hpy188I	TCNGA	9 cut(s)	87, 235, 393, 1127, 1483, 1495, 1789, 1836, 1969
Hpy188III	TCNNGA	9 cut(s)	437, 509, 910, 973, 1334, 1523, 1594, 2038, 2086
Hpy8I	GTNNAC	2 cut(s)	1024, 1409
Hpy99I	CGWCG	1 cut(s)	43
HpyCH4III	ACNGT	3 cut(s)	891, 1104, 1587
HpyCH4IV	ACGT	2 cut(s)	41, 1231
HpyF10VI	GCNNNNNNNGC	3 cut(s)	661, 1381, 1958
HpyF3I	CTNAG	8 cut(s)	86, 345, 446, 1442, 1608, 1652, 1957, 1974
HpySE526I	ACGT	2 cut(s)	41, 1231
Hsp92I	GRCGYC	1 cut(s)	1375
HspAI	GCGC	1 cut(s)	1922
KpnI	GGTACC	1 cut(s)	2028
Ksp22I	TGATCA	1 cut(s)	1246
LmnI	GCTCC	2 cut(s)	527, 652
Lsp1109I	GCAGC	3 cut(s)	751, 2017, 2062
LweI	GCATC	8 cut(s)	44, 574, 601, 628, 788, 1970, 2008, 2033
MaeI	CTAG	4 cut(s)	519, 1152, 1616, 1830
MaeII	ACGT	2 cut(s)	41, 1231
MaeIII	GTNAC	3 cut(s)	759, 791, 1928
MfeI	CAATTG	1 cut(s)	830
MflI	RGATCY	5 cut(s)	803, 952, 1148, 1348, 1561
MhlI	GDGCHC	1 cut(s)	1782
MlsI	TGGCCA	1 cut(s)	113
MluNI	TGGCCA	1 cut(s)	113
MlyI	GAGTC	3 cut(s)	1414, 1487, 1964
MmeI	TCCRAC	4 cut(s)	781, 1138, 1491, 1814
Mox20I	TGGCCA	1 cut(s)	113
Mph1103I	ATGCAT	2 cut(s)	826, 1631
MscI	TGGCCA	1 cut(s)	113
MseI	TTAA	8 cut(s)	141, 339, 558, 657, 897, 1098, 1323, 1343
MslI	CAYNNNNRTG	2 cut(s)	771, 1182
Msp20I	TGGCCA	1 cut(s)	113
MspA1I	CMGCKG	1 cut(s)	1935
MspCI	CTTAAG	1 cut(s)	656
MspI	CCGG	1 cut(s)	295
MspR9I	CCNGG	3 cut(s)	296, 384, 1433
MunI	CAATTG	1 cut(s)	830
Mva1269I	GAATGC	3 cut(s)	1167, 1868, 1952
MvaI	CCWGG	2 cut(s)	384, 1433
MwoI	GCNNNNNNNGC	3 cut(s)	661, 1381, 1958
NciI	CCSGG	1 cut(s)	296
NdeI	CATATG	1 cut(s)	691
NheI	GCTAGC	1 cut(s)	518
NlaIV	GGNNCC	2 cut(s)	2026, 2061
NmuCI	GTSAC	3 cut(s)	759, 791, 1928
NsiI	ATGCAT	2 cut(s)	826, 1631
NspI	RCATGY	4 cut(s)	150, 221, 776, 824
NspV	TTCGAA	1 cut(s)	1573
PaeI	GCATGC	1 cut(s)	824
PceI	AGGCCT	1 cut(s)	382
PciI	ACATGT	1 cut(s)	772
PctI	GAATGC	3 cut(s)	1167, 1868, 1952
PfeI	GAWTC	4 cut(s)	65, 994, 1132, 1710
PflFI	GACNNNGTC	2 cut(s)	43, 905
PflMI	CCANNNNNTGG	1 cut(s)	1884
PkrI	GCNGC	4 cut(s)	663, 741, 2007, 2052
PleI	GAGTC	3 cut(s)	1414, 1486, 1964
PpsI	GAGTC	3 cut(s)	1414, 1486, 1964
Ppu21I	YACGTR	1 cut(s)	1232
PpuMI	RGGWCCY	1 cut(s)	1112
PscI	ACATGT	1 cut(s)	772
PshBI	ATTAAT	1 cut(s)	1323
Psp5II	RGGWCCY	1 cut(s)	1112
Psp6I	CCWGG	2 cut(s)	382, 1431
PspGI	CCWGG	2 cut(s)	382, 1431
PspN4I	GGNNCC	2 cut(s)	2026, 2061
PspPI	GGNCC	2 cut(s)	1112, 1836
PspPPI	RGGWCCY	1 cut(s)	1112
PstI	CTGCAG	2 cut(s)	549, 960
PstNI	CAGNNNCTG	1 cut(s)	2011
PsuI	RGATCY	5 cut(s)	803, 952, 1148, 1348, 1561
PsyI	GACNNNGTC	2 cut(s)	43, 905
PvuII	CAGCTG	1 cut(s)	1935
RsaI	GTAC	4 cut(s)	563, 1058, 1534, 2026
RsaNI	GTAC	4 cut(s)	562, 1057, 1533, 2025
RseI	CAYNNNNRTG	2 cut(s)	771, 1182
SaqAI	TTAA	8 cut(s)	141, 339, 558, 657, 897, 1098, 1323, 1343
SatI	GCNGC	4 cut(s)	662, 740, 2006, 2051
Sau96I	GGNCC	2 cut(s)	1112, 1836
ScaI	AGTACT	2 cut(s)	563, 1058
SchI	GAGTC	3 cut(s)	1414, 1487, 1964
ScrFI	CCNGG	3 cut(s)	296, 384, 1433
SduI	GDGCHC	1 cut(s)	1782
SfaNI	GCATC	8 cut(s)	44, 574, 601, 628, 788, 1970, 2008, 2033
SfcI	CTRYAG	8 cut(s)	545, 807, 879, 887, 956, 1385, 1758, 1936
SfuI	TTCGAA	1 cut(s)	1573
SinI	GGWCC	2 cut(s)	1112, 1836
SmiMI	CAYNNNNRTG	2 cut(s)	771, 1182
SmlI	CTYRAG	1 cut(s)	656
SmoI	CTYRAG	1 cut(s)	656
SnaBI	TACGTA	1 cut(s)	1232
SphI	GCATGC	1 cut(s)	824
SseBI	AGGCCT	1 cut(s)	382
SsiI	CCGC	3 cut(s)	602, 662, 746
SspMI	CTAG	4 cut(s)	519, 1152, 1616, 1830
StuI	AGGCCT	1 cut(s)	382
StyD4I	CCNGG	3 cut(s)	294, 382, 1431
StyI	CCWWGG	1 cut(s)	2063
TaaI	ACNGT	3 cut(s)	891, 1104, 1587
TaiI	ACGT	2 cut(s)	44, 1234
TaqI	TCGA	3 cut(s)	38, 364, 1573
TatI	WGTACW	2 cut(s)	561, 1056
TauI	GCSGC	1 cut(s)	664
TfiI	GAWTC	4 cut(s)	65, 994, 1132, 1710
Tru1I	TTAA	8 cut(s)	141, 339, 558, 657, 897, 1098, 1323, 1343
Tru9I	TTAA	8 cut(s)	141, 339, 558, 657, 897, 1098, 1323, 1343
TscAI	CASTG	6 cut(s)	198, 273, 691, 1189, 1902, 2016
TseFI	GTSAC	3 cut(s)	759, 791, 1928
TseI	GCWGC	3 cut(s)	739, 2005, 2050
Tsp45I	GTSAC	3 cut(s)	759, 791, 1928
TspGWI	ACGGA	1 cut(s)	1368
TspRI	CASTG	6 cut(s)	198, 273, 691, 1189, 1902, 2016
Tth111I	GACNNNGTC	2 cut(s)	43, 905
Van91I	CCANNNNNTGG	1 cut(s)	1884
Vha464I	CTTAAG	1 cut(s)	656
VpaK11BI	GGWCC	2 cut(s)	1112, 1836
VspI	ATTAAT	1 cut(s)	1323
XagI	CCTNNNNNAGG	1 cut(s)	1494
XapI	RAATTY	4 cut(s)	4, 504, 1819, 2089
XceI	RCATGY	4 cut(s)	150, 221, 776, 824
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1544
XspI	CTAG	4 cut(s)	519, 1152, 1616, 1830
ZrmI	AGTACT	2 cut(s)	563, 1058
Zsp2I	ATGCAT	2 cut(s)	826, 1631

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.