Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003369.1

Orthogroup ID

OG0010320

Physical Location & Seq

Genomic Coordinates Forward (+)

72447 .. 80171

Gene Structure 7725 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003369.1_g000020.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2805 bp

atggcggccaaggaccacgacaccagactaaagaagcggaagcaagtttccggcggtactaagccggggacccaccatacctccacttccaagaaacccaagctcgtcggctcaaagcccaccaatcctcgaaacaatgactcctctaaacccttcaaacgcccccaaccggcggggcctgacaacgccgagaaaacgacgccgttgtcgaagaaagagcttcgcgtccgcgctaaggagcttgcagaagctaggaagaagaagcgaaagcgttattacaatttagagcatgagcttgcgcatctgtgggagaagatgaggagtcgagatatttccaaggaagatagatataagttggttagcgaagcacttgaaaaaatgaaggggaaaattcctgaaattgctagctcccatgtttcttcccgtgttctgcagacttgtgttaagtactgcacgaaagcagaaagggatgcaaaaaagaaaaaagcggacggggatgcaaacaagagaaaagcagaaaaggatgcagtatttgaggagcttaagccgcattttcttaccctttcacgcagtgcatatggtgttcatctggtgaaaaagatgttagataatgcctccaaacagcagcttgcggagtttatttcgtcacttcatggacatgttgcatcccttctgcgtcacatggttggatctgtagtcgtagagcatgcataccaattgggaaatgcaactcaaaaacaagaacttttggtggaactatattctacagaactacagttgtttaaggacttggtcttgaagaaagagggaaggttagtagatataatatcaaagttagatctgcagaaatcttcagtcctgaagcacatgacttcggtgattcaaccaattttagagaaaggaatagttgaccactctatattacatagggtgttgatagagtacttcaccatagctgaagagttctctgccacagatgtcattaaacagttgtcaggtcctcttcttgtccgaatgattcatacaagggatggatctagggctggaatgctctgtgtcaagcatggcagtgcaaaggaaagaaagaagataatcaaaggaatgaaaggccacatacgtaatatagctagtgatcaatgtggaagtatggtgcttgtttctcttgtttcagttgttgatgacacgaagcttattacaaaggttgtcattaatgagcttcaagaacatttaaaggatcttgtttttgataaggatggaaggcgtccgttgctacagctacttcatccaaattgttcacgctatttgactccctatgacctggcttctctcagtttgtctatcccttctttatccaacaaggttgagtcagacatcccttctgaagggatggaaactgaaactaatgatcctgatgagagtacccaattagttgatggtggaaaaaaagatccttcagttcgaaggcaagaattgttagtcaatagtgggcttgctgagaggctagttgatgtatgcattgcaagtgcaggggagttgcttagatcaaactttggcaaagaagtcatgtatgaggttgcaactgggggtgctgatggaatcctccacccaactttggatgacaagttgaatgaactatatgaagctatagcaactcttgtcgcagagcccaaatccgaagaaccaaaagaagaacacctccttgaaaatttccattctagtcggaccattagaagactaatcttggattgccctgcattcgcttccactctgtggaataaggcactgaaagggaaatgtgaattgtgggcccaaggtcacaggggggataattttcaacaccaattgtcttctttggtggctgaattatatgcaattaaggtgggtttggagttggtagttgaacaaagattgaggaacgtggtggtggaatgggctatacaactgatcaactccaaggatagatgttttgcagctgaaggaggtatggtagaggatattcaacgtattatggctctactcaatatcaacacaatacatcatgttcgtcgtgatgggaatatggctgctcatgcaattgcaaatcatgtagcccgagctaatgggcgaattgtttggttagaggatgggcctgattggctcatgtcacttatcgtcaatgataagactttagccgggtttgatttctgtgaagtgaatgctgtttttttcgcgagctctgaatctcggagcttcgatctgatggcggcggggacaatggcgaccgccgccggagctgctgtgattctgtactacatgtttggccggagagcgtcgtcgaaggacggcgttgaggacgacgacgacgacaatcggagcggagatttctccaagtcgagatcggctaggaggaggctttctcggcgaccggctcaggcgccggccacgtggatcgagtcaatgtccaccttgtccgatacgctgcgtttcacttactctgagactctagggaaatggccgatcggcgacttggccttcggcattaactacctcatgcgtaggcaggggaatttacaagtggcgagtgtgtatgctggtagtgatagtgtgcagctcaaaggcgctaagattattgaggaactaaattattacttgaagctgttgacgctttgttatctgttttccaagaagccctttccggtgtttttagagtccggcggtttctctatggaagatgtccttcttcagaagcccaaggctgcggttcgtaagctcttaacttcgttctatgtaactgcatttggttatgtgcttacattgcccttctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006417 GO:0007275 GO:0008150 GO:0009790 GO:0009791 GO:0009793 GO:0009889 GO:0010154 GO:0010468 GO:0010556 GO:0010608 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032268 GO:0032501 GO:0032502 GO:0034248 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051246 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0080090 GO:0097159 GO:1901363 GO:2000112

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CPL zf-XS

Protein Analysis

934

Amino Acids

104.53

Weight (kDa)

9.17

Isoelectric Point (pI)

40.56

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010320)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16810
fragaria_vesca	FvH4_4g18900 FvH4_4g18900
malus_domestica	MD13G1162200.v1.1 MD16G1162000.v1.1
prunus_persica	Prupe.1G129500_v2.0.a1
pyrus_communis	pycom13g13840 pycom16g13730 pycom16g13740
rosa_chinensis	RchiOBHm_Chr4g0423801
rosa_laevigata	RLG00000007532
rosa_multiflora	Rmu_co8056970.1_g000001 Rmu_sc0003369.1_g000020
rosa_roxburghii	Rroxscaffold_5G00365910
rosa_rugosa	Rorug04G0190800
rosa_samantha	Rh4AG250200 Rh4BG255400 Rh4CG064700 Rh4CG263400 Rh4DG249700
rosa_wichuraiana	Rw4G021420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	205
Acc16I	TGCGCA	1 cut(s)	300
AccB1I	GGYRCC	1 cut(s)	2413
AccB7I	CCANNNNNTGG	1 cut(s)	1770
AccBSI	CCGCTC	1 cut(s)	2355
AccII	CGCG	3 cut(s)	225, 231, 2210
AclWI	GGATC	6 cut(s)	697, 1042, 1242, 1400, 1442, 2435
AcoI	YGGCCR	4 cut(s)	6, 2299, 2418, 2492
AcsI	RAATTY	3 cut(s)	390, 1705, 2545
AcuI	CTGAAG	7 cut(s)	837, 881, 978, 1401, 1437, 1995, 2705
AcvI	CACGTG	1 cut(s)	2424
AcyI	GRCGYC	3 cut(s)	200, 1261, 2414
AdeI	CACNNNGTG	2 cut(s)	572, 1770
AfaI	GTAC	5 cut(s)	58, 449, 944, 1420, 2288
AfiI	CCNNNNNNNGG	6 cut(s)	169, 172, 235, 1382, 1612, 1770
AflII	CTTAAG	1 cut(s)	542
AflIII	ACRYGT	2 cut(s)	658, 2292
AjnI	CCWGG	1 cut(s)	1317
Alw21I	GWGCWC	1 cut(s)	2216
Alw26I	GTCTC	1 cut(s)	2471
AlwI	GGATC	6 cut(s)	697, 1042, 1242, 1400, 1442, 2435
Ama87I	CYCGRG	1 cut(s)	2091
AoxI	GGCC	9 cut(s)	6, 176, 1108, 1806, 2126, 2299, 2418, 2492, 2508
ApaI	GGGCCC	1 cut(s)	1810
ApeKI	GCWGC	7 cut(s)	625, 1970, 2063, 2273, 2458, 2587, 2735
ApoI	RAATTY	3 cut(s)	390, 1705, 2545
ArsI	GACNNNNNNTTYG	2 cut(s)	2495, 2527
AseI	ATTAAT	1 cut(s)	1209
AspLEI	GCGC	4 cut(s)	233, 301, 2416, 2600
AspS9I	GGNCC	8 cut(s)	13, 69, 176, 998, 1722, 1806, 1807, 2126
AsuC2I	CCSGG	2 cut(s)	66, 2173
AsuHPI	GGTGA	3 cut(s)	604, 889, 940
AsuII	TTCGAA	1 cut(s)	1459
AsuNHI	GCTAGC	1 cut(s)	404
AvaI	CYCGRG	1 cut(s)	2091
AvaII	GGWCC	4 cut(s)	13, 69, 998, 1722
BaeGI	GKGCMC	1 cut(s)	1810
BanI	GGYRCC	1 cut(s)	2413
BanII	GRGCYC	3 cut(s)	1668, 1810, 2216
BbrPI	CACGTG	1 cut(s)	2424
BbsI	GAAGAC	2 cut(s)	1738, 1839
Bbv12I	GWGCWC	1 cut(s)	2216
BbvI	GCAGC	7 cut(s)	637, 1982, 2050, 2260, 2445, 2599, 2722
BccI	CCATC	8 cut(s)	1025, 1247, 1381, 1427, 1586, 2045, 2117, 2233
BceAI	ACGGC	2 cut(s)	187, 2338
BciT130I	CCWGG	1 cut(s)	1319
BclI	TGATCA	2 cut(s)	1132, 1944
BcnI	CCSGG	2 cut(s)	66, 2173
BcoDI	GTCTC	1 cut(s)	2471
BfaI	CTAG	8 cut(s)	252, 405, 1038, 1128, 1502, 1716, 2382, 2483
BfmI	CTRYAG	7 cut(s)	431, 693, 765, 773, 842, 1271, 1644
BfoI	RGCGCY	2 cut(s)	2417, 2601
BfrI	CTTAAG	1 cut(s)	542
BglI	GCCNNNNNGGC	1 cut(s)	2134
BglII	AGATCT	1 cut(s)	838
BmcAI	AGTACT	2 cut(s)	449, 944
Bme1390I	CCNGG	3 cut(s)	66, 1319, 2173
Bme18I	GGWCC	4 cut(s)	13, 69, 998, 1722
BmeT110I	CYCGRG	1 cut(s)	2091
BmgT120I	GGNCC	8 cut(s)	13, 69, 176, 998, 1722, 1806, 1807, 2126
BmiI	GGNNCC	5 cut(s)	70, 71, 177, 1808, 2415
BmrFI	CCNGG	3 cut(s)	66, 1319, 2173
BmrI	ACTGGG	1 cut(s)	1590
BmsI	GCATC	5 cut(s)	310, 460, 487, 514, 674
BmtI	GCTAGC	1 cut(s)	408
BmuI	ACTGGG	1 cut(s)	1590
BpiI	GAAGAC	2 cut(s)	1738, 1839
BplI	GAGNNNNNCTC	2 cut(s)	2380, 2412
Bpu10I	CCTNAGC	2 cut(s)	234, 2409
Bpu14I	TTCGAA	1 cut(s)	1459
BpuMI	CCSGG	2 cut(s)	66, 2173
BsaAI	YACGTR	2 cut(s)	1118, 2424
BsaHI	GRCGYC	3 cut(s)	200, 1261, 2414
BsaJI	CCNNGG	6 cut(s)	9, 65, 336, 1810, 1953, 2730
BsaWI	WCCGGW	1 cut(s)	2674
BsaXI	ACNNNNNCTCC	8 cut(s)	65, 95, 125, 155, 1971, 2001, 2262, 2292
Bsc4I	CCNNNNNNNGG	6 cut(s)	169, 172, 235, 1382, 1612, 1770
Bse118I	RCCGGY	3 cut(s)	169, 2404, 2416
Bse1I	ACTGG	1 cut(s)	1585
Bse3DI	GCAATG	2 cut(s)	1515, 2792
BseBI	CCWGG	1 cut(s)	1319
BseDI	CCNNGG	6 cut(s)	9, 65, 336, 1810, 1953, 2730
BseLI	CCNNNNNNNGG	6 cut(s)	169, 172, 235, 1382, 1612, 1770
BseMI	GCAATG	2 cut(s)	1515, 2792
BseMII	CTCAG	4 cut(s)	1342, 1485, 2423, 2466
BseNI	ACTGG	1 cut(s)	1585
BseRI	GAGGAG	4 cut(s)	133, 334, 551, 2401
BseSI	GKGCMC	1 cut(s)	1810
BseXI	GCAGC	7 cut(s)	637, 1982, 2050, 2260, 2445, 2599, 2722
BsgI	GTGCAG	3 cut(s)	436, 1545, 2606
Bsh1236I	CGCG	3 cut(s)	225, 231, 2210
Bsh1285I	CGRYCG	3 cut(s)	2262, 2405, 2499
BshFI	GGCC	9 cut(s)	8, 178, 1110, 1808, 2128, 2301, 2420, 2494, 2510
BshNI	GGYRCC	1 cut(s)	2413
BsiEI	CGRYCG	3 cut(s)	2262, 2405, 2499
BsiHKAI	GWGCWC	1 cut(s)	2216
BsiHKCI	CYCGRG	1 cut(s)	2091
BslFI	GGGAC	2 cut(s)	82, 2263
BslI	CCNNNNNNNGG	6 cut(s)	169, 172, 235, 1382, 1612, 1770
BsmAI	GTCTC	1 cut(s)	2471
BsmFI	GGGAC	2 cut(s)	82, 2263
BsmI	GAATGC	3 cut(s)	1053, 1754, 2200
BsnI	GGCC	9 cut(s)	8, 178, 1110, 1808, 2128, 2301, 2420, 2494, 2510
BsoBI	CYCGRG	1 cut(s)	2091
Bsp119I	TTCGAA	1 cut(s)	1459
Bsp120I	GGGCCC	1 cut(s)	1806
Bsp1286I	GDGCHC	3 cut(s)	1668, 1810, 2216
Bsp68I	TCGCGA	1 cut(s)	2210
BspANI	GGCC	9 cut(s)	8, 178, 1110, 1808, 2128, 2301, 2420, 2494, 2510
BspCNI	CTCAG	4 cut(s)	1341, 1486, 2422, 2467
BspFNI	CGCG	3 cut(s)	225, 231, 2210
BspLI	GGNNCC	5 cut(s)	70, 71, 177, 1808, 2415
BspMAI	CTGCAG	2 cut(s)	435, 846
BspOI	GCTAGC	1 cut(s)	408
BspPI	GGATC	6 cut(s)	697, 1042, 1242, 1400, 1442, 2435
BspT104I	TTCGAA	1 cut(s)	1459
BspT107I	GGYRCC	1 cut(s)	2413
BspTI	CTTAAG	1 cut(s)	542
BsrBI	CCGCTC	1 cut(s)	2355
BsrDI	GCAATG	2 cut(s)	1515, 2792
BsrFI	RCCGGY	3 cut(s)	169, 2404, 2416
BsrI	ACTGG	1 cut(s)	1585
BssAI	RCCGGY	3 cut(s)	169, 2404, 2416
BssECI	CCNNGG	6 cut(s)	9, 65, 336, 1810, 1953, 2730
BssNI	GRCGYC	3 cut(s)	200, 1261, 2414
BssT1I	CCWWGG	5 cut(s)	9, 336, 1810, 1953, 2730
Bst2UI	CCWGG	1 cut(s)	1319
Bst4CI	ACNGT	2 cut(s)	777, 990
Bst6I	CTCTTC	2 cut(s)	954, 1008
BstACI	GRCGYC	3 cut(s)	200, 1261, 2414
BstAFI	CTTAAG	1 cut(s)	542
BstBAI	YACGTR	2 cut(s)	1118, 2424
BstBI	TTCGAA	1 cut(s)	1459
BstC8I	GCNNGC	8 cut(s)	243, 297, 406, 630, 708, 1491, 2212, 2418
BstDEI	CTNAG	8 cut(s)	60, 234, 1328, 1494, 1538, 2409, 2475, 2601
BstENI	CCTNNNNNAGG	1 cut(s)	1380
BstFNI	CGCG	3 cut(s)	225, 231, 2210
BstH2I	RGCGCY	2 cut(s)	2417, 2601
BstHHI	GCGC	4 cut(s)	233, 301, 2416, 2600
BstMAI	GTCTC	1 cut(s)	2471
BstMCI	CGRYCG	3 cut(s)	2262, 2405, 2499
BstNI	CCWGG	1 cut(s)	1319
BstNSI	RCATGY	3 cut(s)	662, 710, 2296
BstSCI	CCNGG	3 cut(s)	64, 1317, 2171
BstSFI	CTRYAG	7 cut(s)	431, 693, 765, 773, 842, 1271, 1644
BstSLI	GKGCMC	1 cut(s)	1810
BstSNI	TACGTA	1 cut(s)	1118
BstUI	CGCG	3 cut(s)	225, 231, 2210
BstV1I	GCAGC	7 cut(s)	637, 1982, 2050, 2260, 2445, 2599, 2722
BstV2I	GAAGAC	2 cut(s)	1738, 1839
BstX2I	RGATCY	5 cut(s)	689, 838, 1034, 1234, 1447
BstYI	RGATCY	5 cut(s)	689, 838, 1034, 1234, 1447
BsuRI	GGCC	9 cut(s)	8, 178, 1110, 1808, 2128, 2301, 2420, 2494, 2510
BtsI	GCAGTG	2 cut(s)	577, 1075
BtsIMutI	CAGTG	3 cut(s)	577, 1075, 1781
BtuMI	TCGCGA	1 cut(s)	2210
Cac8I	GCNNGC	8 cut(s)	243, 297, 406, 630, 708, 1491, 2212, 2418
CfoI	GCGC	4 cut(s)	233, 301, 2416, 2600
Cfr10I	RCCGGY	3 cut(s)	169, 2404, 2416
Cfr13I	GGNCC	8 cut(s)	13, 69, 176, 998, 1722, 1806, 1807, 2126
CseI	GACGC	6 cut(s)	208, 214, 665, 1250, 2298, 2650
Csp6I	GTAC	5 cut(s)	57, 448, 943, 1419, 2287
CspCI	CAANNNNNGTGG	2 cut(s)	1860, 1895
CviQI	GTAC	5 cut(s)	57, 448, 943, 1419, 2287
DdeI	CTNAG	8 cut(s)	60, 234, 1328, 1494, 1538, 2409, 2475, 2601
DinI	GGCGCC	1 cut(s)	2415
DraI	TTTAAA	1 cut(s)	1230
DraIII	CACNNNGTG	2 cut(s)	572, 1770
DrdI	GACNNNNNNGTC	1 cut(s)	205
DseDI	GACNNNNNNGTC	1 cut(s)	205
EaeI	YGGCCR	4 cut(s)	6, 2299, 2418, 2492
Eam1104I	CTCTTC	2 cut(s)	954, 1008
EarI	CTCTTC	2 cut(s)	954, 1008
Ecl136II	GAGCTC	1 cut(s)	2214
Eco105I	TACGTA	1 cut(s)	1118
Eco130I	CCWWGG	5 cut(s)	9, 336, 1810, 1953, 2730
Eco24I	GRGCYC	3 cut(s)	1668, 1810, 2216
Eco47I	GGWCC	4 cut(s)	13, 69, 998, 1722
Eco53kI	GAGCTC	1 cut(s)	2214
Eco57I	CTGAAG	7 cut(s)	837, 881, 978, 1401, 1437, 1995, 2705
Eco72I	CACGTG	1 cut(s)	2424
Eco88I	CYCGRG	1 cut(s)	2091
EcoICRI	GAGCTC	1 cut(s)	2214
EcoNI	CCTNNNNNAGG	1 cut(s)	1380
EcoO109I	RGGNCCY	3 cut(s)	69, 176, 998
EcoRII	CCWGG	1 cut(s)	1317
EcoT14I	CCWWGG	5 cut(s)	9, 336, 1810, 1953, 2730
EcoT22I	ATGCAT	2 cut(s)	712, 1517
EcoT38I	GRGCYC	3 cut(s)	1668, 1810, 2216
EgeI	GGCGCC	1 cut(s)	2415
EheI	GGCGCC	1 cut(s)	2415
ErhI	CCWWGG	5 cut(s)	9, 336, 1810, 1953, 2730
FalI	AAGNNNNNCTT	4 cut(s)	2654, 2686, 2700, 2732
FaqI	GGGAC	2 cut(s)	82, 2263
FauI	CCCGC	2 cut(s)	166, 2239
FauNDI	CATATG	1 cut(s)	577
FbaI	TGATCA	2 cut(s)	1132, 1944
FriOI	GRGCYC	3 cut(s)	1668, 1810, 2216
FspBI	CTAG	8 cut(s)	252, 405, 1038, 1128, 1502, 1716, 2382, 2483
FspI	TGCGCA	1 cut(s)	300
GlaI	GCGC	4 cut(s)	232, 300, 2415, 2599
HaeII	RGCGCY	2 cut(s)	2417, 2601
HaeIII	GGCC	9 cut(s)	8, 178, 1110, 1808, 2128, 2301, 2420, 2494, 2510
HgaI	GACGC	6 cut(s)	208, 214, 665, 1250, 2298, 2650
HhaI	GCGC	4 cut(s)	233, 301, 2416, 2600
Hin1I	GRCGYC	3 cut(s)	200, 1261, 2414
Hin6I	GCGC	4 cut(s)	231, 299, 2414, 2598
HinP1I	GCGC	4 cut(s)	231, 299, 2414, 2598
HincII	GTYRAC	2 cut(s)	910, 2640
HindII	GTYRAC	2 cut(s)	910, 2640
HindIII	AAGCTT	1 cut(s)	1187
HphI	GGTGA	3 cut(s)	604, 889, 940
Hpy166II	GTNNAC	4 cut(s)	910, 1295, 2442, 2640
Hpy188III	TCNNGA	9 cut(s)	326, 395, 796, 859, 1220, 1409, 2048, 2209, 2373
Hpy8I	GTNNAC	4 cut(s)	910, 1295, 2442, 2640
Hpy99I	CGWCG	8 cut(s)	110, 202, 2049, 2314, 2317, 2339, 2342, 2345
HpyCH4III	ACNGT	2 cut(s)	777, 990
HpyCH4IV	ACGT	4 cut(s)	1117, 1917, 2002, 2423
HpyF3I	CTNAG	8 cut(s)	60, 234, 1328, 1494, 1538, 2409, 2475, 2601
HpySE526I	ACGT	4 cut(s)	1117, 1917, 2002, 2423
Hsp92I	GRCGYC	3 cut(s)	200, 1261, 2414
HspAI	GCGC	4 cut(s)	231, 299, 2414, 2598
KasI	GGCGCC	1 cut(s)	2413
KflI	GGGWCCC	1 cut(s)	69
KroI	GCCGGC	1 cut(s)	2416
KroNI	GCCGGC	1 cut(s)	2418
Ksp22I	TGATCA	2 cut(s)	1132, 1944
LmnI	GCTCC	6 cut(s)	238, 413, 538, 2226, 2270, 2352
Lsp1109I	GCAGC	7 cut(s)	637, 1982, 2050, 2260, 2445, 2599, 2722
LweI	GCATC	5 cut(s)	310, 460, 487, 514, 674
MaeI	CTAG	8 cut(s)	252, 405, 1038, 1128, 1502, 1716, 2382, 2483
MaeII	ACGT	4 cut(s)	1117, 1917, 2002, 2423
MaeIII	GTNAC	5 cut(s)	645, 677, 1814, 2142, 2767
MbiI	CCGCTC	1 cut(s)	2355
MfeI	CAATTG	3 cut(s)	716, 1841, 2073
MflI	RGATCY	5 cut(s)	689, 838, 1034, 1234, 1447
MhlI	GDGCHC	3 cut(s)	1668, 1810, 2216
Mly113I	GGCGCC	1 cut(s)	2414
MlyI	GAGTC	7 cut(s)	134, 331, 1300, 1373, 2441, 2473, 2696
MmeI	TCCRAC	3 cut(s)	667, 1377, 1700
Mph1103I	ATGCAT	2 cut(s)	712, 1517
MroNI	GCCGGC	1 cut(s)	2416
MseI	TTAA	9 cut(s)	444, 543, 783, 984, 1209, 1229, 1875, 2520, 2753
MslI	CAYNNNNRTG	2 cut(s)	657, 1068
MspA1I	CMGCKG	1 cut(s)	1973
MspCI	CTTAAG	1 cut(s)	542
MspR9I	CCNGG	3 cut(s)	66, 1319, 2173
MunI	CAATTG	3 cut(s)	716, 1841, 2073
Mva1269I	GAATGC	3 cut(s)	1053, 1754, 2200
MvaI	CCWGG	1 cut(s)	1319
MvnI	CGCG	3 cut(s)	225, 231, 2210
NaeI	GCCGGC	1 cut(s)	2418
NarI	GGCGCC	1 cut(s)	2414
NciI	CCSGG	2 cut(s)	66, 2173
NdeI	CATATG	1 cut(s)	577
NgoMIV	GCCGGC	1 cut(s)	2416
NheI	GCTAGC	1 cut(s)	404
NlaIV	GGNNCC	5 cut(s)	70, 71, 177, 1808, 2415
NmeAIII	GCCGAG	2 cut(s)	214, 2377
NmuCI	GTSAC	4 cut(s)	645, 677, 1814, 2142
NruI	TCGCGA	1 cut(s)	2210
NsbI	TGCGCA	1 cut(s)	300
NsiI	ATGCAT	2 cut(s)	712, 1517
NspI	RCATGY	3 cut(s)	662, 710, 2296
NspV	TTCGAA	1 cut(s)	1459
PaeI	GCATGC	1 cut(s)	710
PciI	ACATGT	2 cut(s)	658, 2292
PcsI	WCGNNNNNNNCGW	2 cut(s)	206, 2340
PctI	GAATGC	3 cut(s)	1053, 1754, 2200
PdiI	GCCGGC	1 cut(s)	2418
PfeI	GAWTC	5 cut(s)	880, 1018, 1596, 2219, 2281
PflFI	GACNNNGTC	1 cut(s)	791
PflMI	CCANNNNNTGG	1 cut(s)	1770
Ple19I	CGATCG	1 cut(s)	2499
PleI	GAGTC	7 cut(s)	134, 330, 1300, 1372, 2440, 2473, 2695
PluTI	GGCGCC	1 cut(s)	2417
PmaCI	CACGTG	1 cut(s)	2424
PmlI	CACGTG	1 cut(s)	2424
PpsI	GAGTC	7 cut(s)	134, 330, 1300, 1372, 2440, 2473, 2695
Ppu21I	YACGTR	2 cut(s)	1118, 2424
PpuMI	RGGWCCY	2 cut(s)	69, 998
PscI	ACATGT	2 cut(s)	658, 2292
PshBI	ATTAAT	1 cut(s)	1209
Psp124BI	GAGCTC	1 cut(s)	2216
Psp5II	RGGWCCY	2 cut(s)	69, 998
Psp6I	CCWGG	1 cut(s)	1317
PspCI	CACGTG	1 cut(s)	2424
PspGI	CCWGG	1 cut(s)	1317
PspN4I	GGNNCC	5 cut(s)	70, 71, 177, 1808, 2415
PspOMI	GGGCCC	1 cut(s)	1806
PspPI	GGNCC	8 cut(s)	13, 69, 176, 998, 1722, 1806, 1807, 2126
PspPPI	RGGWCCY	2 cut(s)	69, 998
PstI	CTGCAG	2 cut(s)	435, 846
PsuI	RGATCY	5 cut(s)	689, 838, 1034, 1234, 1447
PsyI	GACNNNGTC	1 cut(s)	791
PvuI	CGATCG	1 cut(s)	2499
PvuII	CAGCTG	1 cut(s)	1973
RruI	TCGCGA	1 cut(s)	2210
RsaI	GTAC	5 cut(s)	58, 449, 944, 1420, 2288
RsaNI	GTAC	5 cut(s)	57, 448, 943, 1419, 2287
RseI	CAYNNNNRTG	2 cut(s)	657, 1068
SacI	GAGCTC	1 cut(s)	2216
SaqAI	TTAA	9 cut(s)	444, 543, 783, 984, 1209, 1229, 1875, 2520, 2753
Sau96I	GGNCC	8 cut(s)	13, 69, 176, 998, 1722, 1806, 1807, 2126
ScaI	AGTACT	2 cut(s)	449, 944
SchI	GAGTC	7 cut(s)	134, 331, 1300, 1373, 2441, 2473, 2696
ScrFI	CCNGG	3 cut(s)	66, 1319, 2173
SduI	GDGCHC	3 cut(s)	1668, 1810, 2216
SfaNI	GCATC	5 cut(s)	310, 460, 487, 514, 674
SfcI	CTRYAG	7 cut(s)	431, 693, 765, 773, 842, 1271, 1644
SfoI	GGCGCC	1 cut(s)	2415
SfuI	TTCGAA	1 cut(s)	1459
SinI	GGWCC	4 cut(s)	13, 69, 998, 1722
SmiMI	CAYNNNNRTG	2 cut(s)	657, 1068
SmlI	CTYRAG	1 cut(s)	542
SmoI	CTYRAG	1 cut(s)	542
SnaBI	TACGTA	1 cut(s)	1118
SphI	GCATGC	1 cut(s)	710
SspDI	GGCGCC	1 cut(s)	2413
SspMI	CTAG	8 cut(s)	252, 405, 1038, 1128, 1502, 1716, 2382, 2483
SstI	GAGCTC	1 cut(s)	2216
StyD4I	CCNGG	3 cut(s)	64, 1317, 2171
StyI	CCWWGG	5 cut(s)	9, 336, 1810, 1953, 2730
TaaI	ACNGT	2 cut(s)	777, 990
TaiI	ACGT	4 cut(s)	1120, 1920, 2005, 2426
TaqI	TCGA	8 cut(s)	130, 209, 325, 1459, 2232, 2315, 2372, 2430
TatI	WGTACW	3 cut(s)	447, 942, 2286
TauI	GCSGC	4 cut(s)	8, 550, 2246, 2267
TfiI	GAWTC	5 cut(s)	880, 1018, 1596, 2219, 2281
Tru1I	TTAA	9 cut(s)	444, 543, 783, 984, 1209, 1229, 1875, 2520, 2753
Tru9I	TTAA	9 cut(s)	444, 543, 783, 984, 1209, 1229, 1875, 2520, 2753
TscAI	CASTG	3 cut(s)	577, 1075, 1788
TseFI	GTSAC	4 cut(s)	645, 677, 1814, 2142
TseI	GCWGC	7 cut(s)	625, 1970, 2063, 2273, 2458, 2587, 2735
Tsp45I	GTSAC	4 cut(s)	645, 677, 1814, 2142
TspDTI	ATGAA	8 cut(s)	395, 575, 641, 1010, 1118, 1271, 1644, 1653
TspGWI	ACGGA	1 cut(s)	1254
TspRI	CASTG	3 cut(s)	577, 1075, 1788
Tth111I	GACNNNGTC	1 cut(s)	791
Van91I	CCANNNNNTGG	1 cut(s)	1770
Vha464I	CTTAAG	1 cut(s)	542
VpaK11BI	GGWCC	4 cut(s)	13, 69, 998, 1722
VspI	ATTAAT	1 cut(s)	1209
XagI	CCTNNNNNAGG	1 cut(s)	1380
XapI	RAATTY	3 cut(s)	390, 1705, 2545
XceI	RCATGY	3 cut(s)	662, 710, 2296
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1430
XspI	CTAG	8 cut(s)	252, 405, 1038, 1128, 1502, 1716, 2382, 2483
ZrmI	AGTACT	2 cut(s)	449, 944
Zsp2I	ATGCAT	2 cut(s)	712, 1517

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.