Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0010320

Physical Location & Seq

Genomic Coordinates Reverse (-)

51815279 .. 51820057

Gene Structure 4779 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG263400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1605 bp

ATGGCGGCCAAGGACCACGACACCAGACTAAAGAAGCGAAAGCAAGTTTCCGGCGGTACTAAGCCGGAGACCCACCATACCTCCACTTCCAAGAAACCCAAGCTCGTCGGCTCAAAGCCCACCAATCCTCGAAACAATGACTCCTCTAAACCCTTCAAACGCCCCAAACCGGCGGGGCCTGACAGCGCCGAGAAAACGACGCCGTTGTCGAAGAAAGAGCTTCGCGTCCGCGCTAAGGAGCTTGCAGAAGCTAGGAAGAAGAAGCGAAAGCGTTATTACAATTTAGAGCATGAGCTTGCGCATCTGTGGGAGAAGATGAGGAGTCGAGATATTTCCAAGGAAGATAGATATAAGTTGGTTAGCGAAGCACTTGAAAAAATGAAGGGGAAAATTCCTGAAATTGCTAGCTCCCATGTTTCTTCCCGTGTTCTGCAGACTTGTGTTAAGTACTGCACGAAAGCAGAAAGGGATGCAAAAAAGAAAAAAGCGGACGGGGATGCAAAAAAGAGAAAAGCAGAAAAGGATGCAGTATTTGAGGAGCTTAAGCCGCATTTTCTTACCCTTTCACGCAGTGCATATGGTGTTCATCTGGTGAAAAAGATGTTAGATAATGCCTCCAAACAGCAGCTTGCGGAGTTTATTTCATCACTCCATGGACATGTTGCATCCCTTCTGCGTCACATGGTTGGATCTGTAGTCGTAGAGCATGCATACCAATTGGGAAATGCAACTCAAAAACAAGAACTTTTGGTGGAACTATATTCTACAGAACTACAGTTGTTTAAGGACTTGGTCTTGAAGAAAGAGGGAAGGTTAGTAGATATAATATCAAAGTTAGATCTGCAGAAATCTTCAGTCCTGAAGCACATGACTTCAGTGATTCAACCAATTTTAGAGAAAGGAATAGTTGACCACTCTATATTACATAGGGTGTTGATAGAGTACTTCACCATTGCTGAAGAGTTCTCTGCCACAGATGTCATTAAACAGTTGTCAGGTCCTCTTCTTGTCCGAATGATTCATACAAGGGATGGATCTAGGGTTGGAATGCTCTGTGTCAAGCATGGCAGTGCAAAGGAAAGAAAGAAGATAATCAAAGGAATGAAAGGCCACATACGTAATATAGCTAGTGATCAATGTGGAAGTATGGTGCTTGTTTCTCTTGTTTCAGTTGTTGATGACACGAAGCTTATTACAAAGGTTGTCATTAATGAGCTTCAAGAACATTTAAAGGATCTTGTTTTTGATAAGGATGGAAGGCGTCCGTTGCTACAGCTACTTCATCCAAATTGTTCACGCTATTTGACTCCCTATGACCTGGCTTCTCTCAGTTTGTCTATCCCTTCTTTATCCAACAAGGTTGAGTCAGACATCCCTTCTGAAGGGATGGAAACTGAAACTAATGATCCTGATGAGAGTACCCAATTAGTTGATGGTGGAAAAAAAGATCCTTCAGTTCGAAGGCAAGAATTGTTAGTCAAGAGTGGGCTTGCTGAGAGGCTAGTTGATGTATGCATTGCAAGTGCAGGGGAGTTGCTTAGATCAAACTTTGGCAAAGAAGTCATGTATGAGGTACTCAGTTTACTTCTTTTTGTTTCATTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006417 GO:0007275 GO:0008150 GO:0009790 GO:0009791 GO:0009793 GO:0009889 GO:0010154 GO:0010468 GO:0010556 GO:0010608 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032268 GO:0032501 GO:0032502 GO:0034248 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051246 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0080090 GO:0097159 GO:1901363 GO:2000112

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CPL zf-XS

Protein Analysis

534

Amino Acids

60.02

Weight (kDa)

9.57

Isoelectric Point (pI)

33.33

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010320)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16810
fragaria_vesca	FvH4_4g18900 FvH4_4g18900
malus_domestica	MD13G1162200.v1.1 MD16G1162000.v1.1
prunus_persica	Prupe.1G129500_v2.0.a1
pyrus_communis	pycom13g13840 pycom16g13730 pycom16g13740
rosa_chinensis	RchiOBHm_Chr4g0423801
rosa_laevigata	RLG00000007532
rosa_multiflora	Rmu_co8056970.1_g000001 Rmu_sc0003369.1_g000020
rosa_roxburghii	Rroxscaffold_5G00365910
rosa_rugosa	Rorug04G0190800
rosa_samantha	Rh4AG250200 Rh4BG255400 Rh4CG064700 Rh4CG263400 Rh4DG249700
rosa_wichuraiana	Rw4G021420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	205
Acc16I	TGCGCA	1 cut(s)	300
AccII	CGCG	2 cut(s)	225, 231
AciI	CCGC	7 cut(s)	5, 54, 173, 229, 488, 548, 632
AclWI	GGATC	5 cut(s)	697, 1042, 1242, 1400, 1442
AcoI	YGGCCR	1 cut(s)	6
AcsI	RAATTY	1 cut(s)	390
AcuI	CTGAAG	6 cut(s)	837, 858, 881, 978, 1401, 1437
AcyI	GRCGYC	2 cut(s)	200, 1261
AdeI	CACNNNGTG	1 cut(s)	572
AfaI	GTAC	5 cut(s)	58, 449, 944, 1420, 1575
AfiI	CCNNNNNNNGG	3 cut(s)	169, 235, 1382
AflII	CTTAAG	1 cut(s)	542
AflIII	ACRYGT	1 cut(s)	658
AgsI	TTSAA	5 cut(s)	157, 374, 799, 884, 1220
AjnI	CCWGG	1 cut(s)	1317
Alw26I	GTCTC	1 cut(s)	62
AlwI	GGATC	5 cut(s)	697, 1042, 1242, 1400, 1442
AoxI	GGCC	3 cut(s)	6, 176, 1108
ApeKI	GCWGC	1 cut(s)	625
ApoI	RAATTY	1 cut(s)	390
AseI	ATTAAT	1 cut(s)	1209
AspLEI	GCGC	3 cut(s)	188, 233, 301
AspS9I	GGNCC	3 cut(s)	13, 176, 998
AsuHPI	GGTGA	2 cut(s)	604, 940
AsuII	TTCGAA	1 cut(s)	1459
AsuNHI	GCTAGC	1 cut(s)	404
AvaII	GGWCC	2 cut(s)	13, 998
BbvI	GCAGC	1 cut(s)	637
BccI	CCATC	4 cut(s)	1025, 1247, 1381, 1427
BceAI	ACGGC	1 cut(s)	187
BciT130I	CCWGG	1 cut(s)	1319
BclI	TGATCA	1 cut(s)	1132
BcoDI	GTCTC	1 cut(s)	62
BfaI	CTAG	5 cut(s)	252, 405, 1038, 1128, 1502
BfmI	CTRYAG	6 cut(s)	431, 693, 765, 773, 842, 1271
BfoI	RGCGCY	1 cut(s)	189
BfrI	CTTAAG	1 cut(s)	542
BglII	AGATCT	1 cut(s)	838
BisI	GCNGC	3 cut(s)	6, 548, 626
BlsI	GCNGC	3 cut(s)	7, 549, 627
BmcAI	AGTACT	2 cut(s)	449, 944
Bme1390I	CCNGG	1 cut(s)	1319
Bme18I	GGWCC	2 cut(s)	13, 998
BmgT120I	GGNCC	3 cut(s)	13, 176, 998
BmiI	GGNNCC	1 cut(s)	177
BmrFI	CCNGG	1 cut(s)	1319
BmsI	GCATC	5 cut(s)	310, 460, 487, 514, 674
BmtI	GCTAGC	1 cut(s)	408
Bpu10I	CCTNAGC	1 cut(s)	234
Bpu14I	TTCGAA	1 cut(s)	1459
BsaAI	YACGTR	1 cut(s)	1118
BsaHI	GRCGYC	2 cut(s)	200, 1261
BsaI	GGTCTC	1 cut(s)	62
BsaJI	CCNNGG	3 cut(s)	9, 336, 652
BsaXI	ACNNNNNCTCC	4 cut(s)	65, 95, 125, 155
Bsc4I	CCNNNNNNNGG	3 cut(s)	169, 235, 1382
Bse118I	RCCGGY	1 cut(s)	169
Bse3DI	GCAATG	2 cut(s)	951, 1515
BseBI	CCWGG	1 cut(s)	1319
BseDI	CCNNGG	3 cut(s)	9, 336, 652
BseGI	GGATG	9 cut(s)	475, 502, 529, 665, 1036, 1258, 1282, 1371, 1392
BseLI	CCNNNNNNNGG	3 cut(s)	169, 235, 1382
BseMI	GCAATG	2 cut(s)	951, 1515
BseMII	CTCAG	3 cut(s)	1342, 1485, 1591
BseRI	GAGGAG	3 cut(s)	133, 334, 551
BseXI	GCAGC	1 cut(s)	637
BsgI	GTGCAG	2 cut(s)	436, 1545
Bsh1236I	CGCG	2 cut(s)	225, 231
BshFI	GGCC	3 cut(s)	8, 178, 1110
BsiSI	CCGG	3 cut(s)	51, 65, 170
BslI	CCNNNNNNNGG	3 cut(s)	169, 235, 1382
BsmAI	GTCTC	1 cut(s)	62
BsmI	GAATGC	1 cut(s)	1053
BsnI	GGCC	3 cut(s)	8, 178, 1110
Bso31I	GGTCTC	1 cut(s)	62
Bsp119I	TTCGAA	1 cut(s)	1459
Bsp143I	GATC	8 cut(s)	689, 838, 1034, 1132, 1234, 1405, 1447, 1541
Bsp19I	CCATGG	1 cut(s)	652
BspACI	CCGC	7 cut(s)	5, 54, 173, 229, 488, 548, 632
BspANI	GGCC	3 cut(s)	8, 178, 1110
BspCNI	CTCAG	3 cut(s)	1341, 1486, 1590
BspFNI	CGCG	2 cut(s)	225, 231
BspLI	GGNNCC	1 cut(s)	177
BspMAI	CTGCAG	2 cut(s)	435, 846
BspOI	GCTAGC	1 cut(s)	408
BspPI	GGATC	5 cut(s)	697, 1042, 1242, 1400, 1442
BspT104I	TTCGAA	1 cut(s)	1459
BspTI	CTTAAG	1 cut(s)	542
BspTNI	GGTCTC	1 cut(s)	62
BsrDI	GCAATG	2 cut(s)	951, 1515
BsrFI	RCCGGY	1 cut(s)	169
BssAI	RCCGGY	1 cut(s)	169
BssECI	CCNNGG	3 cut(s)	9, 336, 652
BssMI	GATC	8 cut(s)	689, 838, 1034, 1132, 1234, 1405, 1447, 1541
BssNI	GRCGYC	2 cut(s)	200, 1261
BssT1I	CCWWGG	3 cut(s)	9, 336, 652
Bst2UI	CCWGG	1 cut(s)	1319
Bst4CI	ACNGT	2 cut(s)	777, 990
Bst6I	CTCTTC	2 cut(s)	954, 1008
BstACI	GRCGYC	2 cut(s)	200, 1261
BstAFI	CTTAAG	1 cut(s)	542
BstBAI	YACGTR	1 cut(s)	1118
BstBI	TTCGAA	1 cut(s)	1459
BstC8I	GCNNGC	6 cut(s)	243, 297, 406, 630, 708, 1491
BstDEI	CTNAG	6 cut(s)	60, 234, 1328, 1494, 1538, 1577
BstDSI	CCRYGG	1 cut(s)	652
BstENI	CCTNNNNNAGG	1 cut(s)	1380
BstF5I	GGATG	9 cut(s)	475, 502, 529, 665, 1036, 1258, 1282, 1371, 1392
BstFNI	CGCG	2 cut(s)	225, 231
BstH2I	RGCGCY	1 cut(s)	189
BstHHI	GCGC	3 cut(s)	188, 233, 301
BstKTI	GATC	8 cut(s)	692, 841, 1037, 1135, 1237, 1408, 1450, 1544
BstMAI	GTCTC	1 cut(s)	62
BstMBI	GATC	8 cut(s)	689, 838, 1034, 1132, 1234, 1405, 1447, 1541
BstMWI	GCNNNNNNNGC	2 cut(s)	547, 1267
BstNI	CCWGG	1 cut(s)	1319
BstNSI	RCATGY	2 cut(s)	662, 710
BstSCI	CCNGG	1 cut(s)	1317
BstSFI	CTRYAG	6 cut(s)	431, 693, 765, 773, 842, 1271
BstSNI	TACGTA	1 cut(s)	1118
BstUI	CGCG	2 cut(s)	225, 231
BstV1I	GCAGC	1 cut(s)	637
BstX2I	RGATCY	5 cut(s)	689, 838, 1034, 1234, 1447
BstYI	RGATCY	5 cut(s)	689, 838, 1034, 1234, 1447
BsuRI	GGCC	3 cut(s)	8, 178, 1110
BtgI	CCRYGG	1 cut(s)	652
BtsCI	GGATG	9 cut(s)	475, 502, 529, 665, 1036, 1258, 1282, 1371, 1392
BtsI	GCAGTG	2 cut(s)	577, 1075
BtsIMutI	CAGTG	3 cut(s)	577, 882, 1075
Cac8I	GCNNGC	6 cut(s)	243, 297, 406, 630, 708, 1491
CfoI	GCGC	3 cut(s)	188, 233, 301
Cfr10I	RCCGGY	1 cut(s)	169
Cfr13I	GGNCC	3 cut(s)	13, 176, 998
CseI	GACGC	4 cut(s)	208, 214, 665, 1250
Csp6I	GTAC	5 cut(s)	57, 448, 943, 1419, 1574
CviAII	CATG	9 cut(s)	290, 413, 653, 659, 682, 707, 868, 1064, 1564
CviQI	GTAC	5 cut(s)	57, 448, 943, 1419, 1574
DdeI	CTNAG	6 cut(s)	60, 234, 1328, 1494, 1538, 1577
DpnI	GATC	8 cut(s)	691, 840, 1036, 1134, 1236, 1407, 1449, 1543
DpnII	GATC	8 cut(s)	689, 838, 1034, 1132, 1234, 1405, 1447, 1541
DraI	TTTAAA	1 cut(s)	1230
DraIII	CACNNNGTG	1 cut(s)	572
DrdI	GACNNNNNNGTC	1 cut(s)	205
DseDI	GACNNNNNNGTC	1 cut(s)	205
EaeI	YGGCCR	1 cut(s)	6
Eam1104I	CTCTTC	2 cut(s)	954, 1008
EarI	CTCTTC	2 cut(s)	954, 1008
Eco105I	TACGTA	1 cut(s)	1118
Eco130I	CCWWGG	3 cut(s)	9, 336, 652
Eco31I	GGTCTC	1 cut(s)	62
Eco47I	GGWCC	2 cut(s)	13, 998
Eco57I	CTGAAG	6 cut(s)	837, 858, 881, 978, 1401, 1437
EcoNI	CCTNNNNNAGG	1 cut(s)	1380
EcoO109I	RGGNCCY	2 cut(s)	176, 998
EcoRII	CCWGG	1 cut(s)	1317
EcoT14I	CCWWGG	3 cut(s)	9, 336, 652
EcoT22I	ATGCAT	2 cut(s)	712, 1517
ErhI	CCWWGG	3 cut(s)	9, 336, 652
FaeI	CATG	9 cut(s)	293, 416, 656, 662, 685, 710, 871, 1067, 1567
FatI	CATG	9 cut(s)	289, 412, 652, 658, 681, 706, 867, 1063, 1563
FauI	CCCGC	1 cut(s)	166
FauNDI	CATATG	1 cut(s)	577
FbaI	TGATCA	1 cut(s)	1132
Fnu4HI	GCNGC	3 cut(s)	6, 548, 626
FokI	GGATG	9 cut(s)	482, 509, 536, 652, 1043, 1265, 1269, 1358, 1399
Fsp4HI	GCNGC	3 cut(s)	6, 548, 626
FspBI	CTAG	5 cut(s)	252, 405, 1038, 1128, 1502
FspI	TGCGCA	1 cut(s)	300
GlaI	GCGC	3 cut(s)	187, 232, 300
GluI	GCNGC	3 cut(s)	6, 548, 626
HaeII	RGCGCY	1 cut(s)	189
HaeIII	GGCC	3 cut(s)	8, 178, 1110
HapII	CCGG	3 cut(s)	51, 65, 170
HgaI	GACGC	4 cut(s)	208, 214, 665, 1250
HhaI	GCGC	3 cut(s)	188, 233, 301
Hin1I	GRCGYC	2 cut(s)	200, 1261
Hin1II	CATG	9 cut(s)	293, 416, 656, 662, 685, 710, 871, 1067, 1567
Hin6I	GCGC	3 cut(s)	186, 231, 299
HinP1I	GCGC	3 cut(s)	186, 231, 299
HincII	GTYRAC	1 cut(s)	910
HindII	GTYRAC	1 cut(s)	910
HindIII	AAGCTT	1 cut(s)	1187
HinfI	GANTC	6 cut(s)	140, 322, 880, 1018, 1306, 1364
HpaII	CCGG	3 cut(s)	51, 65, 170
HphI	GGTGA	2 cut(s)	604, 940
Hpy166II	GTNNAC	3 cut(s)	910, 1295, 1583
Hpy188I	TCNGA	3 cut(s)	1013, 1369, 1381
Hpy188III	TCNNGA	7 cut(s)	326, 395, 796, 859, 1220, 1409, 1480
Hpy8I	GTNNAC	3 cut(s)	910, 1295, 1583
Hpy99I	CGWCG	2 cut(s)	110, 202
HpyCH4III	ACNGT	2 cut(s)	777, 990
HpyCH4IV	ACGT	1 cut(s)	1117
HpyF10VI	GCNNNNNNNGC	2 cut(s)	547, 1267
HpyF3I	CTNAG	6 cut(s)	60, 234, 1328, 1494, 1538, 1577
HpySE526I	ACGT	1 cut(s)	1117
Hsp92I	GRCGYC	2 cut(s)	200, 1261
Hsp92II	CATG	9 cut(s)	293, 416, 656, 662, 685, 710, 871, 1067, 1567
HspAI	GCGC	3 cut(s)	186, 231, 299
Ksp22I	TGATCA	1 cut(s)	1132
Kzo9I	GATC	8 cut(s)	689, 838, 1034, 1132, 1234, 1405, 1447, 1541
LmnI	GCTCC	3 cut(s)	238, 413, 538
Lsp1109I	GCAGC	1 cut(s)	637
LweI	GCATC	5 cut(s)	310, 460, 487, 514, 674
MaeI	CTAG	5 cut(s)	252, 405, 1038, 1128, 1502
MaeII	ACGT	1 cut(s)	1117
MaeIII	GTNAC	1 cut(s)	677
MalI	GATC	8 cut(s)	691, 840, 1036, 1134, 1236, 1407, 1449, 1543
MboI	GATC	8 cut(s)	689, 838, 1034, 1132, 1234, 1405, 1447, 1541
MfeI	CAATTG	1 cut(s)	716
MflI	RGATCY	5 cut(s)	689, 838, 1034, 1234, 1447
MluCI	AATT	8 cut(s)	280, 390, 399, 716, 888, 1288, 1424, 1469
MlyI	GAGTC	4 cut(s)	134, 331, 1300, 1373
MmeI	TCCRAC	3 cut(s)	667, 1024, 1377
Mph1103I	ATGCAT	2 cut(s)	712, 1517
MseI	TTAA	6 cut(s)	444, 543, 783, 984, 1209, 1229
MslI	CAYNNNNRTG	2 cut(s)	657, 1068
MspCI	CTTAAG	1 cut(s)	542
MspI	CCGG	3 cut(s)	51, 65, 170
MspR9I	CCNGG	1 cut(s)	1319
MunI	CAATTG	1 cut(s)	716
Mva1269I	GAATGC	1 cut(s)	1053
MvaI	CCWGG	1 cut(s)	1319
MvnI	CGCG	2 cut(s)	225, 231
MwoI	GCNNNNNNNGC	2 cut(s)	547, 1267
NcoI	CCATGG	1 cut(s)	652
NdeI	CATATG	1 cut(s)	577
NdeII	GATC	8 cut(s)	689, 838, 1034, 1132, 1234, 1405, 1447, 1541
NheI	GCTAGC	1 cut(s)	404
NlaIII	CATG	9 cut(s)	293, 416, 656, 662, 685, 710, 871, 1067, 1567
NlaIV	GGNNCC	1 cut(s)	177
NmeAIII	GCCGAG	1 cut(s)	214
NmuCI	GTSAC	1 cut(s)	677
NsbI	TGCGCA	1 cut(s)	300
NsiI	ATGCAT	2 cut(s)	712, 1517
NspI	RCATGY	2 cut(s)	662, 710
NspV	TTCGAA	1 cut(s)	1459
PaeI	GCATGC	1 cut(s)	710
PciI	ACATGT	1 cut(s)	658
PcsI	WCGNNNNNNNCGW	1 cut(s)	206
PctI	GAATGC	1 cut(s)	1053
PfeI	GAWTC	2 cut(s)	880, 1018
PflFI	GACNNNGTC	1 cut(s)	791
PkrI	GCNGC	3 cut(s)	7, 549, 627
PleI	GAGTC	4 cut(s)	134, 330, 1300, 1372
PpsI	GAGTC	4 cut(s)	134, 330, 1300, 1372
Ppu21I	YACGTR	1 cut(s)	1118
PpuMI	RGGWCCY	1 cut(s)	998
PscI	ACATGT	1 cut(s)	658
PshBI	ATTAAT	1 cut(s)	1209
Psp5II	RGGWCCY	1 cut(s)	998
Psp6I	CCWGG	1 cut(s)	1317
PspGI	CCWGG	1 cut(s)	1317
PspN4I	GGNNCC	1 cut(s)	177
PspPI	GGNCC	3 cut(s)	13, 176, 998
PspPPI	RGGWCCY	1 cut(s)	998
PstI	CTGCAG	2 cut(s)	435, 846
PsuI	RGATCY	5 cut(s)	689, 838, 1034, 1234, 1447
PsyI	GACNNNGTC	1 cut(s)	791
RsaI	GTAC	5 cut(s)	58, 449, 944, 1420, 1575
RsaNI	GTAC	5 cut(s)	57, 448, 943, 1419, 1574
RseI	CAYNNNNRTG	2 cut(s)	657, 1068
SaqAI	TTAA	6 cut(s)	444, 543, 783, 984, 1209, 1229
SatI	GCNGC	3 cut(s)	6, 548, 626
Sau3AI	GATC	8 cut(s)	689, 838, 1034, 1132, 1234, 1405, 1447, 1541
Sau96I	GGNCC	3 cut(s)	13, 176, 998
ScaI	AGTACT	2 cut(s)	449, 944
SchI	GAGTC	4 cut(s)	134, 331, 1300, 1373
ScrFI	CCNGG	1 cut(s)	1319
SfaNI	GCATC	5 cut(s)	310, 460, 487, 514, 674
SfcI	CTRYAG	6 cut(s)	431, 693, 765, 773, 842, 1271
SfuI	TTCGAA	1 cut(s)	1459
SinI	GGWCC	2 cut(s)	13, 998
SmiMI	CAYNNNNRTG	2 cut(s)	657, 1068
SmlI	CTYRAG	1 cut(s)	542
SmoI	CTYRAG	1 cut(s)	542
SnaBI	TACGTA	1 cut(s)	1118
SphI	GCATGC	1 cut(s)	710
Sse9I	AATT	8 cut(s)	280, 390, 399, 716, 888, 1288, 1424, 1469
SsiI	CCGC	7 cut(s)	5, 54, 173, 229, 488, 548, 632
SspMI	CTAG	5 cut(s)	252, 405, 1038, 1128, 1502
StyD4I	CCNGG	1 cut(s)	1317
StyI	CCWWGG	3 cut(s)	9, 336, 652
TaaI	ACNGT	2 cut(s)	777, 990
TaiI	ACGT	1 cut(s)	1120
TaqI	TCGA	4 cut(s)	130, 209, 325, 1459
TasI	AATT	8 cut(s)	280, 390, 399, 716, 888, 1288, 1424, 1469
TatI	WGTACW	2 cut(s)	447, 942
TauI	GCSGC	2 cut(s)	8, 550
TfiI	GAWTC	2 cut(s)	880, 1018
Tru1I	TTAA	6 cut(s)	444, 543, 783, 984, 1209, 1229
Tru9I	TTAA	6 cut(s)	444, 543, 783, 984, 1209, 1229
TscAI	CASTG	3 cut(s)	577, 882, 1075
TseFI	GTSAC	1 cut(s)	677
TseI	GCWGC	1 cut(s)	625
Tsp45I	GTSAC	1 cut(s)	677
TspDTI	ATGAA	7 cut(s)	395, 575, 633, 1010, 1118, 1271, 1587
TspGWI	ACGGA	1 cut(s)	1254
TspRI	CASTG	3 cut(s)	577, 882, 1075
Tth111I	GACNNNGTC	1 cut(s)	791
Vha464I	CTTAAG	1 cut(s)	542
VpaK11BI	GGWCC	2 cut(s)	13, 998
VspI	ATTAAT	1 cut(s)	1209
XagI	CCTNNNNNAGG	1 cut(s)	1380
XapI	RAATTY	1 cut(s)	390
XceI	RCATGY	2 cut(s)	662, 710
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1430
XspI	CTAG	5 cut(s)	252, 405, 1038, 1128, 1502
ZrmI	AGTACT	2 cut(s)	449, 944
Zsp2I	ATGCAT	2 cut(s)	712, 1517

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.