Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0010320

Physical Location & Seq

Genomic Coordinates Forward (+)

9840795 .. 9845197

Gene Structure 4403 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom13g13840.7

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2052 bp

ATGGGCTACCCGAAATCCAAAACCCTGAAAAAACCCTTCAATAGAACGCAAGACACAGAAGAATTTGAGAGCTCCAGAGTACTCCAATGGCGGCCAAGAAGCAGGAGAAGAGCTCGCCGAAGAAGAGGAAGCAAATCCCAGGCAATAAGCTGGAGACCCACAGCTCCTCTTCCAAGAAGCCCAAGCTCCTCGACTCCAAGCGCTCAAATCCTCGAAGCACCGACTTCAAGAAACCCTCCAAACCTTTCAAGCCCCGAGAACCAGGACTCGATCGATGAGAAACAAGTTCCGCTGTCGAAGCGAGAGGGCCGCCTCCGTGCCAAGGAACTTGCGGAGGCTAGGAAGAAGAAGCGGAAGCGTCATTACAATTTAGAGCAAGAGCTTGCACATCTGTGGGAGAAGATGCGGCAACGAAATATATCCAAAGAAGATCGATCCAAGTTGGTGAGTGAAGCGTTAGAGAAAATGAAGGGGAAAATTCCTGAAATCGCAAGTTCCCATGTGTCTTCTCGTGTTCTGCAGACTTGCGTTAAGTACTGTTCACAAGCGGAAAAGGATGCAGTCTTTGAGGAGCTTCAGCCACATCTTCTTACTCTTGCATGCAACACATATGCTGTTCATCTGGTGACCAAAATGTTAGACAATGCCTCCAAAAAGCAGCTAGCGGCATTTATCTCCTCTCTCCGAGGACATGTTGCTTCCCTTCTTCGTCACATGGTTGGTTCTGTAGTCGTTGAGCACGCATACCAATTGGGAAATGCAACTCAAAAGCAAGAGCTTTTGGTGGAACTATATTCTACAGAGCTTCAGTTGTTTAAGGACTTGGTCTCGAAGAATGAGGGCAGGTTACTAGATATAATTTCAAAGCTAGATCTGCAGAAATCTTCTGTCTTCCGGCACATGACTTCGGTGATTCAACCAATTTTAGAGAAAGGAATAATTGATCACTCTATAGTACATAGGGTGTTAATAGAGTACTTCACAATAGCTGAGCAGTTCTCTGCCGCAGATGTAATTAAACAGTTGTCGGGTCCACTTCTTGTTCGGGTGATACACACAAGGGATGGATCCAAGGTTGGGATGCTCTGTGTCAAGCATGGTAGTTCAAAGGAAAGAAAGAAGATAATTAAAGGAATGAAAGGCCACGTTCATAAAATAGCTCTTGATCAAGGTGGAAGCATGGTGCTTGTTTGCCTTGTTTCAACTGTTGATGACACAAAGCTTACTACAAAGGTTGTCATTAATGAGCTTCAAGAAAACCTAAAGGATCTTGTTCTCGATAAGAATGGAAGGCGCCCATTACTGCAGCTACTTCATCCAAATTGTTCACGTTATTTGACTCCCGATGACCTGGCTTCCCTCAGTTTGTCTATCCCTTCTCTTTCCAGCAAGGTTGAACCAGACAATTCTGAAACAAAATCTTCAAAGGTTAACAAATCTGGTGAAGAGGCCAATAGTGATTTGGAATTGGATGAAGCTGATATGAATCCTGATGATGGCCTCCACTCAGTTGAGGGAGGAAAAAAGGATCCTGCCGTTCGAAGGCAAGAGTTGTTAGTCCAGAGTGGGTTGGCCGAGAAGCTAGTTGATGTATGCATTACAAGTGCAGGGGAATTACTTAGATCAAATTTTGGCAAAGAAGTCATATATGAGGTTGCAACTGGGGGTGCTGGCGGCATTCTCCACCCAACTTTGGATGACAAGTTGAATGAACTATATGAAGCTATAGCATCTCTTGTCGCAGAACCTAAATCCCAAGAATCCAAAGAGGACTCAAAAGAGGAACACATCCTTGAAAATTTCCATTCCAGTCGGACCATTAGAAAACTAATCTTGGACTGCCCCACATTTGCTTCCACTTTGTGGAACAAAGCACTTAAAGGAAAGTGTGATTTGTGGGCCCAAGGTCACAGTGGGAAGGTGATTGCTGCATTCTTAGAATCTTCGGACTCTAAGGTCAATCAACTGGCAAATAAAGAGTTGAAGAAGTTGATAGATGGTGGCATTCTCAAAGTTCCTGAGCCAAAAGCAGTTACCGGAAAGAAAGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006417 GO:0007275 GO:0008150 GO:0009790 GO:0009791 GO:0009793 GO:0009889 GO:0010154 GO:0010468 GO:0010556 GO:0010608 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032268 GO:0032501 GO:0032502 GO:0034248 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051246 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0080090 GO:0097159 GO:1901363 GO:2000112

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CPL zf-XS

Protein Analysis

684

Amino Acids

76.18

Weight (kDa)

9.27

Isoelectric Point (pI)

49.28

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010320)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16810
fragaria_vesca	FvH4_4g18900 FvH4_4g18900
malus_domestica	MD13G1162200.v1.1 MD16G1162000.v1.1
prunus_persica	Prupe.1G129500_v2.0.a1
pyrus_communis	pycom13g13840 pycom16g13730 pycom16g13740
rosa_chinensis	RchiOBHm_Chr4g0423801
rosa_laevigata	RLG00000007532
rosa_multiflora	Rmu_co8056970.1_g000001 Rmu_sc0003369.1_g000020
rosa_roxburghii	Rroxscaffold_5G00365910
rosa_rugosa	Rorug04G0190800
rosa_samantha	Rh4AG250200 Rh4BG255400 Rh4CG064700 Rh4CG263400 Rh4DG249700
rosa_wichuraiana	Rw4G021420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1955
Acc36I	ACCTGC	1 cut(s)	834
AccB1I	GGYRCC	1 cut(s)	1293
AccB7I	CCANNNNNTGG	1 cut(s)	1863
AclWI	GGATC	6 cut(s)	429, 1062, 1075, 1275, 1523, 1536
AcoI	YGGCCR	2 cut(s)	92, 1572
AcsI	RAATTY	4 cut(s)	62, 477, 1627, 1798
AcuI	CTGAAG	2 cut(s)	560, 791
AcyI	GRCGYC	1 cut(s)	1294
AdeI	CACNNNGTG	1 cut(s)	1863
AfaI	GTAC	4 cut(s)	81, 536, 957, 977
AfeI	AGCGCT	1 cut(s)	202
AfiI	CCNNNNNNNGG	6 cut(s)	322, 1077, 1496, 1542, 1693, 1863
AflIII	ACRYGT	1 cut(s)	691
AjnI	CCWGG	3 cut(s)	138, 261, 1350
AleI	CACNNNNGTG	1 cut(s)	391
Alw21I	GWGCWC	3 cut(s)	74, 115, 741
Alw26I	GTCTC	2 cut(s)	148, 832
AlwI	GGATC	6 cut(s)	429, 1062, 1075, 1275, 1523, 1536
Ama87I	CYCGRG	1 cut(s)	254
Aor51HI	AGCGCT	1 cut(s)	202
AoxI	GGCC	7 cut(s)	92, 307, 1141, 1449, 1498, 1572, 1899
ApaI	GGGCCC	1 cut(s)	1903
ApeKI	GCWGC	3 cut(s)	658, 1306, 1928
ApoI	RAATTY	4 cut(s)	62, 477, 1627, 1798
AseI	ATTAAT	1 cut(s)	1242
AspLEI	GCGC	2 cut(s)	203, 1296
AspS9I	GGNCC	5 cut(s)	307, 1031, 1815, 1899, 1900
AsuHPI	GGTGA	6 cut(s)	457, 637, 922, 1060, 1454, 1933
AsuII	TTCGAA	1 cut(s)	1540
AsuNHI	GCTAGC	1 cut(s)	661
AvaI	CYCGRG	1 cut(s)	254
AvaII	GGWCC	2 cut(s)	1031, 1815
BaeGI	GKGCMC	1 cut(s)	1903
BamHI	GGATCC	2 cut(s)	1067, 1528
BanI	GGYRCC	1 cut(s)	1293
BanII	GRGCYC	3 cut(s)	74, 115, 1903
BarI	GAAGNNNNNNTAC	2 cut(s)	347, 379
BauI	CACGAG	1 cut(s)	510
BbsI	GAAGAC	2 cut(s)	498, 883
Bbv12I	GWGCWC	3 cut(s)	74, 115, 741
BbvI	GCAGC	3 cut(s)	670, 1318, 1915
BccI	CCATC	3 cut(s)	1058, 1490, 1991
BceAI	ACGGC	1 cut(s)	1520
BciT130I	CCWGG	3 cut(s)	140, 263, 1352
BclI	TGATCA	2 cut(s)	943, 1165
BcoDI	GTCTC	2 cut(s)	148, 832
BfaI	CTAG	5 cut(s)	339, 662, 851, 869, 1583
BfmI	CTRYAG	7 cut(s)	518, 726, 798, 875, 951, 1304, 1725
BfoI	RGCGCY	2 cut(s)	204, 1297
BfuAI	ACCTGC	1 cut(s)	834
BglII	AGATCT	1 cut(s)	871
BisI	GCNGC	9 cut(s)	92, 310, 407, 659, 666, 1005, 1307, 1675, 1929
BlpI	GCTNAGC	1 cut(s)	990
BlsI	GCNGC	9 cut(s)	93, 311, 408, 660, 667, 1006, 1308, 1676, 1930
BmcAI	AGTACT	3 cut(s)	81, 536, 977
Bme1390I	CCNGG	3 cut(s)	140, 263, 1352
Bme18I	GGWCC	2 cut(s)	1031, 1815
BmeT110I	CYCGRG	1 cut(s)	254
BmgT120I	GGNCC	5 cut(s)	307, 1031, 1815, 1899, 1900
BmiI	GGNNCC	5 cut(s)	1032, 1069, 1295, 1530, 1901
BmrFI	CCNGG	3 cut(s)	140, 263, 1352
BmrI	ACTGGG	1 cut(s)	1671
BmsI	GCATC	4 cut(s)	393, 547, 1071, 1739
BmtI	GCTAGC	1 cut(s)	665
BmuI	ACTGGG	1 cut(s)	1671
BpiI	GAAGAC	2 cut(s)	498, 883
BplI	GAGNNNNNCTC	4 cut(s)	97, 129, 983, 1015
BpmI	CTGGAG	2 cut(s)	58, 172
Bpu10I	CCTNAGC	1 cut(s)	2019
Bpu1102I	GCTNAGC	1 cut(s)	990
Bpu14I	TTCGAA	1 cut(s)	1540
Bsa29I	ATCGAT	2 cut(s)	273, 433
BsaBI	GATNNNNATC	1 cut(s)	1485
BsaHI	GRCGYC	1 cut(s)	1294
BsaI	GGTCTC	2 cut(s)	148, 832
BsaJI	CCNNGG	5 cut(s)	138, 321, 685, 1071, 1903
BsaWI	WCCGGW	1 cut(s)	2036
BsaXI	ACNNNNNCTCC	2 cut(s)	632, 662
Bsc4I	CCNNNNNNNGG	6 cut(s)	322, 1077, 1496, 1542, 1693, 1863
Bse1I	ACTGG	3 cut(s)	1666, 1809, 1971
Bse8I	GATNNNNATC	1 cut(s)	1485
BseBI	CCWGG	3 cut(s)	140, 263, 1352
BseCI	ATCGAT	2 cut(s)	273, 433
BseDI	CCNNGG	5 cut(s)	138, 321, 685, 1071, 1903
BseGI	GGATG	7 cut(s)	562, 1069, 1086, 1315, 1477, 1702, 1788
BseJI	GATNNNNATC	1 cut(s)	1485
BseLI	CCNNNNNNNGG	6 cut(s)	322, 1077, 1496, 1542, 1693, 1863
BseMII	CTCAG	4 cut(s)	981, 1375, 1521, 2010
BseNI	ACTGG	3 cut(s)	1666, 1809, 1971
BseRI	GAGGAG	4 cut(s)	156, 178, 584, 667
BseSI	GKGCMC	1 cut(s)	1903
BseXI	GCAGC	3 cut(s)	670, 1318, 1915
BsgI	GTGCAG	1 cut(s)	1626
Bsh1285I	CGRYCG	1 cut(s)	273
BshFI	GGCC	7 cut(s)	94, 309, 1143, 1451, 1500, 1574, 1901
BshNI	GGYRCC	1 cut(s)	1293
BshVI	ATCGAT	2 cut(s)	273, 433
BsiEI	CGRYCG	1 cut(s)	273
BsiHKAI	GWGCWC	3 cut(s)	74, 115, 741
BsiHKCI	CYCGRG	1 cut(s)	254
BsiSI	CCGG	2 cut(s)	895, 2037
BslI	CCNNNNNNNGG	6 cut(s)	322, 1077, 1496, 1542, 1693, 1863
BsmAI	GTCTC	2 cut(s)	148, 832
BsmI	GAATGC	3 cut(s)	1677, 1931, 2004
BsnI	GGCC	7 cut(s)	94, 309, 1143, 1451, 1500, 1574, 1901
Bso31I	GGTCTC	2 cut(s)	148, 832
BsoBI	CYCGRG	1 cut(s)	254
Bsp119I	TTCGAA	1 cut(s)	1540
Bsp120I	GGGCCC	1 cut(s)	1899
Bsp1286I	GDGCHC	4 cut(s)	74, 115, 741, 1903
Bsp1720I	GCTNAGC	1 cut(s)	990
BspANI	GGCC	7 cut(s)	94, 309, 1143, 1451, 1500, 1574, 1901
BspCNI	CTCAG	4 cut(s)	982, 1374, 1520, 2011
BspDI	ATCGAT	2 cut(s)	273, 433
BspLI	GGNNCC	5 cut(s)	1032, 1069, 1295, 1530, 1901
BspMAI	CTGCAG	3 cut(s)	522, 879, 1308
BspMI	ACCTGC	1 cut(s)	834
BspOI	GCTAGC	1 cut(s)	665
BspPI	GGATC	6 cut(s)	429, 1062, 1075, 1275, 1523, 1536
BspQI	GCTCTTC	1 cut(s)	103
BspT104I	TTCGAA	1 cut(s)	1540
BspT107I	GGYRCC	1 cut(s)	1293
BspTNI	GGTCTC	2 cut(s)	148, 832
BsrI	ACTGG	3 cut(s)	1666, 1809, 1971
BssECI	CCNNGG	5 cut(s)	138, 321, 685, 1071, 1903
BssNI	GRCGYC	1 cut(s)	1294
BssSI	CACGAG	1 cut(s)	510
BssT1I	CCWWGG	3 cut(s)	321, 1071, 1903
Bst2BI	CACGAG	1 cut(s)	510
Bst2UI	CCWGG	3 cut(s)	140, 263, 1352
Bst4CI	ACNGT	4 cut(s)	539, 1023, 1207, 1913
Bst6I	CTCTTC	4 cut(s)	103, 118, 174, 1440
BstACI	GRCGYC	1 cut(s)	1294
BstBI	TTCGAA	1 cut(s)	1540
BstC8I	GCNNGC	6 cut(s)	115, 384, 601, 663, 741, 1672
BstDEI	CTNAG	7 cut(s)	990, 1361, 1507, 1619, 1936, 1953, 2019
BstEII	GGTNACC	1 cut(s)	625
BstF5I	GGATG	7 cut(s)	562, 1069, 1086, 1315, 1477, 1702, 1788
BstH2I	RGCGCY	2 cut(s)	204, 1297
BstHHI	GCGC	2 cut(s)	203, 1296
BstMAI	GTCTC	2 cut(s)	148, 832
BstMCI	CGRYCG	1 cut(s)	273
BstMWI	GCNNNNNNNGC	2 cut(s)	298, 874
BstNI	CCWGG	3 cut(s)	140, 263, 1352
BstNSI	RCATGY	2 cut(s)	603, 695
BstPI	GGTNACC	1 cut(s)	625
BstSCI	CCNGG	3 cut(s)	138, 261, 1350
BstSFI	CTRYAG	7 cut(s)	518, 726, 798, 875, 951, 1304, 1725
BstSLI	GKGCMC	1 cut(s)	1903
BstV1I	GCAGC	3 cut(s)	670, 1318, 1915
BstV2I	GAAGAC	2 cut(s)	498, 883
BstX2I	RGATCY	4 cut(s)	871, 1067, 1267, 1528
BstYI	RGATCY	4 cut(s)	871, 1067, 1267, 1528
Bsu15I	ATCGAT	2 cut(s)	273, 433
BsuRI	GGCC	7 cut(s)	94, 309, 1143, 1451, 1500, 1574, 1901
BsuTUI	ATCGAT	2 cut(s)	273, 433
BtsCI	GGATG	7 cut(s)	562, 1069, 1086, 1315, 1477, 1702, 1788
BtsIMutI	CAGTG	1 cut(s)	1918
BveI	ACCTGC	1 cut(s)	834
Cac8I	GCNNGC	6 cut(s)	115, 384, 601, 663, 741, 1672
CfoI	GCGC	2 cut(s)	203, 1296
Cfr13I	GGNCC	5 cut(s)	307, 1031, 1815, 1899, 1900
ClaI	ATCGAT	2 cut(s)	273, 433
CseI	GACGC	1 cut(s)	347
Csp6I	GTAC	4 cut(s)	80, 535, 956, 976
CviAII	CATG	7 cut(s)	500, 600, 692, 715, 901, 1097, 1180
CviQI	GTAC	4 cut(s)	80, 535, 956, 976
DdeI	CTNAG	7 cut(s)	990, 1361, 1507, 1619, 1936, 1953, 2019
DinI	GGCGCC	1 cut(s)	1295
DraIII	CACNNNGTG	1 cut(s)	1863
DrdI	GACNNNNNNGTC	1 cut(s)	1955
DseDI	GACNNNNNNGTC	1 cut(s)	1955
EaeI	YGGCCR	2 cut(s)	92, 1572
Eam1104I	CTCTTC	4 cut(s)	103, 118, 174, 1440
EarI	CTCTTC	4 cut(s)	103, 118, 174, 1440
Ecl136II	GAGCTC	2 cut(s)	72, 113
Eco130I	CCWWGG	3 cut(s)	321, 1071, 1903
Eco24I	GRGCYC	3 cut(s)	74, 115, 1903
Eco31I	GGTCTC	2 cut(s)	148, 832
Eco47I	GGWCC	2 cut(s)	1031, 1815
Eco47III	AGCGCT	1 cut(s)	202
Eco53kI	GAGCTC	2 cut(s)	72, 113
Eco57I	CTGAAG	2 cut(s)	560, 791
Eco88I	CYCGRG	1 cut(s)	254
Eco91I	GGTNACC	1 cut(s)	625
EcoICRI	GAGCTC	2 cut(s)	72, 113
EcoO65I	GGTNACC	1 cut(s)	625
EcoRII	CCWGG	3 cut(s)	138, 261, 1350
EcoT14I	CCWWGG	3 cut(s)	321, 1071, 1903
EcoT22I	ATGCAT	1 cut(s)	1598
EcoT38I	GRGCYC	3 cut(s)	74, 115, 1903
EgeI	GGCGCC	1 cut(s)	1295
EheI	GGCGCC	1 cut(s)	1295
ErhI	CCWWGG	3 cut(s)	321, 1071, 1903
FaeI	CATG	7 cut(s)	503, 603, 695, 718, 904, 1100, 1183
FatI	CATG	7 cut(s)	499, 599, 691, 714, 900, 1096, 1179
FauNDI	CATATG	1 cut(s)	610
FbaI	TGATCA	2 cut(s)	943, 1165
Fnu4HI	GCNGC	9 cut(s)	92, 310, 407, 659, 666, 1005, 1307, 1675, 1929
FokI	GGATG	7 cut(s)	569, 1076, 1093, 1302, 1484, 1709, 1775
FriOI	GRGCYC	3 cut(s)	74, 115, 1903
Fsp4HI	GCNGC	9 cut(s)	92, 310, 407, 659, 666, 1005, 1307, 1675, 1929
FspBI	CTAG	5 cut(s)	339, 662, 851, 869, 1583
GlaI	GCGC	2 cut(s)	202, 1295
GluI	GCNGC	9 cut(s)	92, 310, 407, 659, 666, 1005, 1307, 1675, 1929
GsuI	CTGGAG	2 cut(s)	58, 172
HaeII	RGCGCY	2 cut(s)	204, 1297
HaeIII	GGCC	7 cut(s)	94, 309, 1143, 1451, 1500, 1574, 1901
HapII	CCGG	2 cut(s)	895, 2037
HgaI	GACGC	1 cut(s)	347
HhaI	GCGC	2 cut(s)	203, 1296
Hin1I	GRCGYC	1 cut(s)	1294
Hin1II	CATG	7 cut(s)	503, 603, 695, 718, 904, 1100, 1183
Hin6I	GCGC	2 cut(s)	201, 1294
HinP1I	GCGC	2 cut(s)	201, 1294
HincII	GTYRAC	1 cut(s)	1432
HindII	GTYRAC	1 cut(s)	1432
HindIII	AAGCTT	1 cut(s)	1220
HinfI	GANTC	9 cut(s)	193, 266, 913, 1339, 1486, 1760, 1772, 1940, 1949
HpaI	GTTAAC	1 cut(s)	1432
HpaII	CCGG	2 cut(s)	895, 2037
HphI	GGTGA	6 cut(s)	457, 637, 922, 1060, 1454, 1933
Hpy166II	GTNNAC	4 cut(s)	542, 1034, 1328, 1432
Hpy188I	TCNGA	4 cut(s)	686, 1411, 1815, 1948
Hpy8I	GTNNAC	4 cut(s)	542, 1034, 1328, 1432
HpyAV	CCTTC	7 cut(s)	46, 463, 713, 1284, 1386, 1536, 1912
HpyCH4III	ACNGT	4 cut(s)	539, 1023, 1207, 1913
HpyCH4IV	ACGT	2 cut(s)	1146, 1330
HpyF10VI	GCNNNNNNNGC	2 cut(s)	298, 874
HpyF3I	CTNAG	7 cut(s)	990, 1361, 1507, 1619, 1936, 1953, 2019
HpySE526I	ACGT	2 cut(s)	1146, 1330
Hsp92I	GRCGYC	1 cut(s)	1294
Hsp92II	CATG	7 cut(s)	503, 603, 695, 718, 904, 1100, 1183
HspAI	GCGC	2 cut(s)	201, 1294
KasI	GGCGCC	1 cut(s)	1293
Ksp22I	TGATCA	2 cut(s)	943, 1165
KspAI	GTTAAC	1 cut(s)	1432
LguI	GCTCTTC	1 cut(s)	103
LmnI	GCTCC	4 cut(s)	77, 169, 191, 571
Lsp1109I	GCAGC	3 cut(s)	670, 1318, 1915
LweI	GCATC	4 cut(s)	393, 547, 1071, 1739
MaeI	CTAG	5 cut(s)	339, 662, 851, 869, 1583
MaeII	ACGT	2 cut(s)	1146, 1330
MaeIII	GTNAC	5 cut(s)	625, 710, 846, 1907, 2032
MfeI	CAATTG	1 cut(s)	749
MflI	RGATCY	4 cut(s)	871, 1067, 1267, 1528
MhlI	GDGCHC	4 cut(s)	74, 115, 741, 1903
Mly113I	GGCGCC	1 cut(s)	1294
MlyI	GAGTC	5 cut(s)	187, 260, 1333, 1766, 1943
MmeI	TCCRAC	1 cut(s)	1793
Mph1103I	ATGCAT	1 cut(s)	1598
MseI	TTAA	8 cut(s)	531, 816, 968, 1017, 1128, 1242, 1431, 1878
MslI	CAYNNNNRTG	1 cut(s)	391
MspA1I	CMGCKG	1 cut(s)	292
MspI	CCGG	2 cut(s)	895, 2037
MspR9I	CCNGG	3 cut(s)	140, 263, 1352
MunI	CAATTG	1 cut(s)	749
Mva1269I	GAATGC	3 cut(s)	1677, 1931, 2004
MvaI	CCWGG	3 cut(s)	140, 263, 1352
MwoI	GCNNNNNNNGC	2 cut(s)	298, 874
NarI	GGCGCC	1 cut(s)	1294
NdeI	CATATG	1 cut(s)	610
NheI	GCTAGC	1 cut(s)	661
NlaIII	CATG	7 cut(s)	503, 603, 695, 718, 904, 1100, 1183
NlaIV	GGNNCC	5 cut(s)	1032, 1069, 1295, 1530, 1901
NmeAIII	GCCGAG	1 cut(s)	1600
NmuCI	GTSAC	3 cut(s)	625, 710, 1907
NsiI	ATGCAT	1 cut(s)	1598
NspI	RCATGY	2 cut(s)	603, 695
NspV	TTCGAA	1 cut(s)	1540
OliI	CACNNNNGTG	1 cut(s)	391
PaeI	GCATGC	1 cut(s)	603
PciI	ACATGT	1 cut(s)	691
PciSI	GCTCTTC	1 cut(s)	103
PctI	GAATGC	3 cut(s)	1677, 1931, 2004
PfeI	GAWTC	4 cut(s)	913, 1486, 1760, 1940
PflFI	GACNNNGTC	1 cut(s)	824
PflMI	CCANNNNNTGG	1 cut(s)	1863
PkrI	GCNGC	9 cut(s)	93, 311, 408, 660, 667, 1006, 1308, 1676, 1930
Ple19I	CGATCG	1 cut(s)	273
PleI	GAGTC	5 cut(s)	187, 260, 1333, 1766, 1943
PluTI	GGCGCC	1 cut(s)	1297
PpsI	GAGTC	5 cut(s)	187, 260, 1333, 1766, 1943
PscI	ACATGT	1 cut(s)	691
PshBI	ATTAAT	1 cut(s)	1242
Psp124BI	GAGCTC	2 cut(s)	74, 115
Psp6I	CCWGG	3 cut(s)	138, 261, 1350
PspEI	GGTNACC	1 cut(s)	625
PspGI	CCWGG	3 cut(s)	138, 261, 1350
PspN4I	GGNNCC	5 cut(s)	1032, 1069, 1295, 1530, 1901
PspOMI	GGGCCC	1 cut(s)	1899
PspPI	GGNCC	5 cut(s)	307, 1031, 1815, 1899, 1900
PstI	CTGCAG	3 cut(s)	522, 879, 1308
PsuI	RGATCY	4 cut(s)	871, 1067, 1267, 1528
PsyI	GACNNNGTC	1 cut(s)	824
PvuI	CGATCG	1 cut(s)	273
RsaI	GTAC	4 cut(s)	81, 536, 957, 977
RsaNI	GTAC	4 cut(s)	80, 535, 956, 976
RseI	CAYNNNNRTG	1 cut(s)	391
SacI	GAGCTC	2 cut(s)	74, 115
SapI	GCTCTTC	1 cut(s)	103
SaqAI	TTAA	8 cut(s)	531, 816, 968, 1017, 1128, 1242, 1431, 1878
SatI	GCNGC	9 cut(s)	92, 310, 407, 659, 666, 1005, 1307, 1675, 1929
Sau96I	GGNCC	5 cut(s)	307, 1031, 1815, 1899, 1900
ScaI	AGTACT	3 cut(s)	81, 536, 977
SchI	GAGTC	5 cut(s)	187, 260, 1333, 1766, 1943
ScrFI	CCNGG	3 cut(s)	140, 263, 1352
SduI	GDGCHC	4 cut(s)	74, 115, 741, 1903
SfaNI	GCATC	4 cut(s)	393, 547, 1071, 1739
SfcI	CTRYAG	7 cut(s)	518, 726, 798, 875, 951, 1304, 1725
SfoI	GGCGCC	1 cut(s)	1295
SfuI	TTCGAA	1 cut(s)	1540
SinI	GGWCC	2 cut(s)	1031, 1815
SmiMI	CAYNNNNRTG	1 cut(s)	391
SphI	GCATGC	1 cut(s)	603
SspDI	GGCGCC	1 cut(s)	1293
SspMI	CTAG	5 cut(s)	339, 662, 851, 869, 1583
SstI	GAGCTC	2 cut(s)	74, 115
StyD4I	CCNGG	3 cut(s)	138, 261, 1350
StyI	CCWWGG	3 cut(s)	321, 1071, 1903
TaaI	ACNGT	4 cut(s)	539, 1023, 1207, 1913
TaiI	ACGT	2 cut(s)	1149, 1333
TaqI	TCGA	9 cut(s)	191, 213, 269, 273, 296, 433, 830, 1278, 1540
TatI	WGTACW	4 cut(s)	79, 534, 955, 975
TauI	GCSGC	6 cut(s)	94, 312, 409, 668, 1007, 1677
TfiI	GAWTC	4 cut(s)	913, 1486, 1760, 1940
Tru1I	TTAA	8 cut(s)	531, 816, 968, 1017, 1128, 1242, 1431, 1878
Tru9I	TTAA	8 cut(s)	531, 816, 968, 1017, 1128, 1242, 1431, 1878
TscAI	CASTG	1 cut(s)	1918
TseFI	GTSAC	3 cut(s)	625, 710, 1907
TseI	GCWGC	3 cut(s)	658, 1306, 1928
Tsp45I	GTSAC	3 cut(s)	625, 710, 1907
TspDTI	ATGAA	9 cut(s)	482, 608, 1139, 1151, 1304, 1488, 1499, 1725, 1734
TspGWI	ACGGA	1 cut(s)	305
TspRI	CASTG	1 cut(s)	1918
Tth111I	GACNNNGTC	1 cut(s)	824
Van91I	CCANNNNNTGG	1 cut(s)	1863
VpaK11BI	GGWCC	2 cut(s)	1031, 1815
VspI	ATTAAT	1 cut(s)	1242
XapI	RAATTY	4 cut(s)	62, 477, 1627, 1798
XceI	RCATGY	2 cut(s)	603, 695
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1459, 1910
XspI	CTAG	5 cut(s)	339, 662, 851, 869, 1583
ZrmI	AGTACT	3 cut(s)	81, 536, 977
Zsp2I	ATGCAT	1 cut(s)	1598

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.