Extension to Ser/Thr-type protein kinases
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G17850 |
| fragaria_vesca | FvH4_5g17560 FvH4_5g17560 FvH4_5g17560 FvH4_5g17560 |
| malus_domestica | MD06G1231400.v1.1 MD06G1231500.v1.1 MD14G1238200.v1.1 |
| prunus_persica | Prupe.5G235400_v2.0.a1 |
| pyrus_communis | pycom06g20530 pycom06g20540 pycom14g19930 pycom14g19940 |
| rosa_chinensis | RchiOBHm_Chr7g0178091 |
| rosa_laevigata | RLG00000005472 |
| rosa_multiflora | Rmu_co8223356.1_g000001 Rmu_sc0000425.1_g000008 |
| rosa_roxburghii | Rroxscaffold_3G00275190 |
| rosa_rugosa | Rorug06G0413400 Rorug06G0413500 Rorug06G0413500 |
| rosa_samantha | Rh7AG012700 Rh7BG012600 Rh7CG012600 Rh7DG012900 |
| rosa_wichuraiana | Rw7G001000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 2 cut(s) | 1201, 3140 |
| Acc16I | TGCGCA | 1 cut(s) | 3042 |
| Acc36I | ACCTGC | 1 cut(s) | 349 |
| Acc65I | GGTACC | 1 cut(s) | 1402 |
| AccB1I | GGYRCC | 1 cut(s) | 1402 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 3852 |
| AccBSI | CCGCTC | 1 cut(s) | 1376 |
| AccI | GTMKAC | 2 cut(s) | 1657, 2779 |
| AccII | CGCG | 2 cut(s) | 2068, 2620 |
| AccIII | TCCGGA | 2 cut(s) | 401, 2101 |
| AclI | AACGTT | 1 cut(s) | 2808 |
| AcsI | RAATTY | 7 cut(s) | 757, 781, 989, 2917, 3243, 3321, 3873 |
| AcvI | CACGTG | 1 cut(s) | 2850 |
| AcyI | GRCGYC | 4 cut(s) | 1198, 1218, 3137, 3821 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 161, 635, 674, 1370, 1737, 1783, 2869, 2977, 3852 |
| AflIII | ACRYGT | 1 cut(s) | 2849 |
| AjnI | CCWGG | 5 cut(s) | 160, 871, 1044, 1144, 1553 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 349, 381 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 135, 167 |
| Alw21I | GWGCWC | 1 cut(s) | 856 |
| Alw26I | GTCTC | 7 cut(s) | 294, 375, 630, 1943, 3095, 3144, 3460 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1925 |
| Ama87I | CYCGRG | 3 cut(s) | 496, 1213, 3700 |
| Aor13HI | TCCGGA | 2 cut(s) | 401, 2101 |
| AoxI | GGCC | 3 cut(s) | 745, 2249, 3389 |
| ApeKI | GCWGC | 9 cut(s) | 1037, 1228, 1394, 1435, 1976, 2348, 3485, 3499, 3551 |
| ApoI | RAATTY | 7 cut(s) | 757, 781, 989, 2917, 3243, 3321, 3873 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1549 |
| Asp718I | GGTACC | 1 cut(s) | 1402 |
| AspA2I | CCTAGG | 1 cut(s) | 2246 |
| AspLEI | GCGC | 4 cut(s) | 1600, 3043, 3198, 3238 |
| AspS9I | GGNCC | 8 cut(s) | 338, 404, 638, 746, 1042, 2174, 2601, 3119 |
| AsuC2I | CCSGG | 3 cut(s) | 1214, 1215, 2364 |
| AsuHPI | GGTGA | 7 cut(s) | 316, 497, 887, 2378, 2884, 2999, 3659 |
| AsuII | TTCGAA | 1 cut(s) | 32 |
| AvaI | CYCGRG | 3 cut(s) | 496, 1213, 3700 |
| AvaII | GGWCC | 7 cut(s) | 338, 404, 638, 1042, 2174, 2601, 3119 |
| AvrII | CCTAGG | 1 cut(s) | 2246 |
| BanI | GGYRCC | 1 cut(s) | 1402 |
| BanII | GRGCYC | 3 cut(s) | 497, 1991, 3078 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2185, 2217 |
| BauI | CACGAG | 1 cut(s) | 3610 |
| BbrPI | CACGTG | 1 cut(s) | 2850 |
| BbsI | GAAGAC | 4 cut(s) | 1110, 1464, 1542, 2088 |
| Bbv12I | GWGCWC | 1 cut(s) | 856 |
| BbvCI | CCTCAGC | 3 cut(s) | 653, 3348, 3489 |
| BbvI | GCAGC | 9 cut(s) | 1049, 1240, 1381, 1447, 1988, 2360, 3497, 3511, 3538 |
| BceAI | ACGGC | 1 cut(s) | 1791 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 687, 721, 3728, 3762 |
| BciT130I | CCWGG | 5 cut(s) | 162, 873, 1046, 1146, 1555 |
| BciVI | GTATCC | 1 cut(s) | 2017 |
| BclI | TGATCA | 3 cut(s) | 2185, 2371, 2802 |
| BcnI | CCSGG | 3 cut(s) | 1214, 1215, 2364 |
| BcoDI | GTCTC | 7 cut(s) | 294, 375, 630, 1943, 3095, 3144, 3460 |
| BfmI | CTRYAG | 2 cut(s) | 1350, 3771 |
| BfoI | RGCGCY | 2 cut(s) | 1601, 3239 |
| BfuAI | ACCTGC | 1 cut(s) | 349 |
| BfuI | GTATCC | 1 cut(s) | 2017 |
| BglII | AGATCT | 3 cut(s) | 77, 2407, 2716 |
| BlnI | CCTAGG | 1 cut(s) | 2246 |
| Bme1390I | CCNGG | 8 cut(s) | 162, 873, 1046, 1146, 1214, 1215, 1555, 2364 |
| Bme18I | GGWCC | 7 cut(s) | 338, 404, 638, 1042, 2174, 2601, 3119 |
| BmeT110I | CYCGRG | 3 cut(s) | 496, 1213, 3700 |
| BmgT120I | GGNCC | 8 cut(s) | 338, 404, 638, 746, 1042, 2174, 2601, 3119 |
| BmiI | GGNNCC | 5 cut(s) | 88, 650, 1404, 2176, 3654 |
| BmrFI | CCNGG | 8 cut(s) | 162, 873, 1046, 1146, 1214, 1215, 1555, 2364 |
| BmrI | ACTGGG | 3 cut(s) | 1771, 2603, 3535 |
| BmuI | ACTGGG | 3 cut(s) | 1771, 2603, 3535 |
| BpiI | GAAGAC | 4 cut(s) | 1110, 1464, 1542, 2088 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 890, 922 |
| BpmI | CTGGAG | 3 cut(s) | 1167, 1557, 1686 |
| Bpu10I | CCTNAGC | 3 cut(s) | 653, 3348, 3489 |
| Bpu14I | TTCGAA | 1 cut(s) | 32 |
| BpuEI | CTTGAG | 3 cut(s) | 1079, 1208, 2617 |
| BpuMI | CCSGG | 3 cut(s) | 1214, 1215, 2364 |
| BsaAI | YACGTR | 1 cut(s) | 2850 |
| BsaBI | GATNNNNATC | 1 cut(s) | 3459 |
| BsaHI | GRCGYC | 4 cut(s) | 1198, 1218, 3137, 3821 |
| BsaI | GGTCTC | 2 cut(s) | 1943, 3095 |
| BsaJI | CCNNGG | 8 cut(s) | 135, 300, 644, 1212, 1213, 2048, 2246, 3386 |
| BsaWI | WCCGGW | 4 cut(s) | 384, 401, 734, 2101 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 838, 868, 1375, 1405 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 161, 635, 674, 1370, 1737, 1783, 2869, 2977, 3852 |
| Bse1I | ACTGG | 7 cut(s) | 718, 849, 1454, 1766, 2211, 2609, 3530 |
| Bse3DI | GCAATG | 1 cut(s) | 2334 |
| Bse8I | GATNNNNATC | 1 cut(s) | 3459 |
| BseAI | TCCGGA | 2 cut(s) | 401, 2101 |
| BseBI | CCWGG | 5 cut(s) | 162, 873, 1046, 1146, 1555 |
| BseDI | CCNNGG | 8 cut(s) | 135, 300, 644, 1212, 1213, 2048, 2246, 3386 |
| BseJI | GATNNNNATC | 1 cut(s) | 3459 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 161, 635, 674, 1370, 1737, 1783, 2869, 2977, 3852 |
| BseMI | GCAATG | 1 cut(s) | 2334 |
| BseNI | ACTGG | 7 cut(s) | 718, 849, 1454, 1766, 2211, 2609, 3530 |
| BseRI | GAGGAG | 6 cut(s) | 661, 1319, 1482, 1717, 1832, 3167 |
| BseXI | GCAGC | 9 cut(s) | 1049, 1240, 1381, 1447, 1988, 2360, 3497, 3511, 3538 |
| BseYI | CCCAGC | 2 cut(s) | 545, 1296 |
| BsgI | GTGCAG | 1 cut(s) | 2367 |
| Bsh1236I | CGCG | 2 cut(s) | 2068, 2620 |
| Bsh1285I | CGRYCG | 1 cut(s) | 739 |
| BshFI | GGCC | 3 cut(s) | 747, 2251, 3391 |
| BshNI | GGYRCC | 1 cut(s) | 1402 |
| BsiEI | CGRYCG | 1 cut(s) | 739 |
| BsiHKAI | GWGCWC | 1 cut(s) | 856 |
| BsiHKCI | CYCGRG | 3 cut(s) | 496, 1213, 3700 |
| BslFI | GGGAC | 8 cut(s) | 39, 57, 906, 2160, 2479, 3148, 3268, 3542 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 161, 635, 674, 1370, 1737, 1783, 2869, 2977, 3852 |
| BsmAI | GTCTC | 7 cut(s) | 294, 375, 630, 1943, 3095, 3144, 3460 |
| BsmBI | CGTCTC | 2 cut(s) | 375, 3144 |
| BsmFI | GGGAC | 8 cut(s) | 39, 57, 906, 2160, 2479, 3148, 3268, 3542 |
| BsmI | GAATGC | 4 cut(s) | 1345, 2770, 2989, 3740 |
| BsnI | GGCC | 3 cut(s) | 747, 2251, 3391 |
| Bso31I | GGTCTC | 2 cut(s) | 1943, 3095 |
| BsoBI | CYCGRG | 3 cut(s) | 496, 1213, 3700 |
| Bsp119I | TTCGAA | 1 cut(s) | 32 |
| Bsp1286I | GDGCHC | 4 cut(s) | 497, 856, 1991, 3078 |
| Bsp13I | TCCGGA | 2 cut(s) | 401, 2101 |
| Bsp1407I | TGTACA | 2 cut(s) | 1318, 1862 |
| Bsp19I | CCATGG | 1 cut(s) | 3386 |
| Bsp68I | TCGCGA | 1 cut(s) | 2068 |
| BspANI | GGCC | 3 cut(s) | 747, 2251, 3391 |
| BspEI | TCCGGA | 2 cut(s) | 401, 2101 |
| BspFNI | CGCG | 2 cut(s) | 2068, 2620 |
| BspHI | TCATGA | 3 cut(s) | 895, 1717, 3712 |
| BspLI | GGNNCC | 5 cut(s) | 88, 650, 1404, 2176, 3654 |
| BspMI | ACCTGC | 1 cut(s) | 349 |
| BspQI | GCTCTTC | 1 cut(s) | 1605 |
| BspT104I | TTCGAA | 1 cut(s) | 32 |
| BspT107I | GGYRCC | 1 cut(s) | 1402 |
| BspTNI | GGTCTC | 2 cut(s) | 1943, 3095 |
| BsrBI | CCGCTC | 1 cut(s) | 1376 |
| BsrDI | GCAATG | 1 cut(s) | 2334 |
| BsrGI | TGTACA | 2 cut(s) | 1318, 1862 |
| BsrI | ACTGG | 7 cut(s) | 718, 849, 1454, 1766, 2211, 2609, 3530 |
| BssECI | CCNNGG | 8 cut(s) | 135, 300, 644, 1212, 1213, 2048, 2246, 3386 |
| BssNAI | GTATAC | 1 cut(s) | 2780 |
| BssNI | GRCGYC | 4 cut(s) | 1198, 1218, 3137, 3821 |
| BssSI | CACGAG | 1 cut(s) | 3610 |
| BssT1I | CCWWGG | 4 cut(s) | 135, 2048, 2246, 3386 |
| Bst1107I | GTATAC | 1 cut(s) | 2780 |
| Bst2BI | CACGAG | 1 cut(s) | 3610 |
| Bst2UI | CCWGG | 5 cut(s) | 162, 873, 1046, 1146, 1555 |
| Bst4CI | ACNGT | 9 cut(s) | 1391, 1588, 2096, 2394, 2452, 2551, 3011, 3207, 3377 |
| Bst6I | CTCTTC | 4 cut(s) | 26, 34, 564, 1605 |
| BstACI | GRCGYC | 4 cut(s) | 1198, 1218, 3137, 3821 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 1034, 2345, 2354, 3696 |
| BstAUI | TGTACA | 2 cut(s) | 1318, 1862 |
| BstBAI | YACGTR | 1 cut(s) | 2850 |
| BstBI | TTCGAA | 1 cut(s) | 32 |
| BstC8I | GCNNGC | 3 cut(s) | 185, 557, 1602 |
| BstDSI | CCRYGG | 1 cut(s) | 3386 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 633 |
| BstFNI | CGCG | 2 cut(s) | 2068, 2620 |
| BstH2I | RGCGCY | 2 cut(s) | 1601, 3239 |
| BstHHI | GCGC | 4 cut(s) | 1600, 3043, 3198, 3238 |
| BstMAI | GTCTC | 7 cut(s) | 294, 375, 630, 1943, 3095, 3144, 3460 |
| BstMCI | CGRYCG | 1 cut(s) | 739 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 1034, 1682, 2336, 2345, 2354, 3122, 3482, 3696 |
| BstNI | CCWGG | 5 cut(s) | 162, 873, 1046, 1146, 1555 |
| BstNSI | RCATGY | 1 cut(s) | 2089 |
| BstSCI | CCNGG | 8 cut(s) | 160, 871, 1044, 1144, 1212, 1213, 1553, 2362 |
| BstSFI | CTRYAG | 2 cut(s) | 1350, 3771 |
| BstUI | CGCG | 2 cut(s) | 2068, 2620 |
| BstV1I | GCAGC | 9 cut(s) | 1049, 1240, 1381, 1447, 1988, 2360, 3497, 3511, 3538 |
| BstV2I | GAAGAC | 4 cut(s) | 1110, 1464, 1542, 2088 |
| BstX2I | RGATCY | 9 cut(s) | 44, 77, 398, 677, 2228, 2407, 2716, 2896, 3454 |
| BstYI | RGATCY | 9 cut(s) | 44, 77, 398, 677, 2228, 2407, 2716, 2896, 3454 |
| BstZ17I | GTATAC | 1 cut(s) | 2780 |
| BsuI | GTATCC | 1 cut(s) | 2017 |
| BsuRI | GGCC | 3 cut(s) | 747, 2251, 3391 |
| BtgI | CCRYGG | 1 cut(s) | 3386 |
| BtsI | GCAGTG | 1 cut(s) | 3697 |
| BtsIMutI | CAGTG | 6 cut(s) | 856, 1169, 1396, 1577, 2547, 3697 |
| BtuMI | TCGCGA | 1 cut(s) | 2068 |
| BveI | ACCTGC | 1 cut(s) | 349 |
| Cac8I | GCNNGC | 3 cut(s) | 185, 557, 1602 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1925 |
| CciI | TCATGA | 3 cut(s) | 895, 1717, 3712 |
| CfoI | GCGC | 4 cut(s) | 1600, 3043, 3198, 3238 |
| Cfr13I | GGNCC | 8 cut(s) | 338, 404, 638, 746, 1042, 2174, 2601, 3119 |
| Cfr9I | CCCGGG | 1 cut(s) | 1213 |
| CseI | GACGC | 5 cut(s) | 199, 1207, 1469, 1593, 3810 |
| CsiI | ACCWGGT | 1 cut(s) | 1044 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1821, 1856 |
| DraI | TTTAAA | 1 cut(s) | 3514 |
| Eam1104I | CTCTTC | 4 cut(s) | 26, 34, 564, 1605 |
| EarI | CTCTTC | 4 cut(s) | 26, 34, 564, 1605 |
| EciI | GGCGGA | 1 cut(s) | 309 |
| Eco130I | CCWWGG | 4 cut(s) | 135, 2048, 2246, 3386 |
| Eco147I | AGGCCT | 1 cut(s) | 2251 |
| Eco24I | GRGCYC | 3 cut(s) | 497, 1991, 3078 |
| Eco31I | GGTCTC | 2 cut(s) | 1943, 3095 |
| Eco47I | GGWCC | 7 cut(s) | 338, 404, 638, 1042, 2174, 2601, 3119 |
| Eco72I | CACGTG | 1 cut(s) | 2850 |
| Eco88I | CYCGRG | 3 cut(s) | 496, 1213, 3700 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 633 |
| EcoO109I | RGGNCCY | 1 cut(s) | 338 |
| EcoRI | GAATTC | 2 cut(s) | 781, 3321 |
| EcoRII | CCWGG | 5 cut(s) | 160, 871, 1044, 1144, 1553 |
| EcoT14I | CCWWGG | 4 cut(s) | 135, 2048, 2246, 3386 |
| EcoT38I | GRGCYC | 3 cut(s) | 497, 1991, 3078 |
| ErhI | CCWWGG | 4 cut(s) | 135, 2048, 2246, 3386 |
| Esp3I | CGTCTC | 2 cut(s) | 375, 3144 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 822, 854, 2073, 2105, 2955, 2987 |
| FaqI | GGGAC | 8 cut(s) | 39, 57, 906, 2160, 2479, 3148, 3268, 3542 |
| FauI | CCCGC | 1 cut(s) | 1369 |
| FauNDI | CATATG | 2 cut(s) | 787, 2505 |
| FbaI | TGATCA | 3 cut(s) | 2185, 2371, 2802 |
| FblI | GTMKAC | 2 cut(s) | 1657, 2779 |
| FriOI | GRGCYC | 3 cut(s) | 497, 1991, 3078 |
| FspI | TGCGCA | 1 cut(s) | 3042 |
| GlaI | GCGC | 4 cut(s) | 1599, 3042, 3197, 3237 |
| GsaI | CCCAGC | 2 cut(s) | 549, 1300 |
| GsuI | CTGGAG | 3 cut(s) | 1167, 1557, 1686 |
| HaeII | RGCGCY | 2 cut(s) | 1601, 3239 |
| HaeIII | GGCC | 3 cut(s) | 747, 2251, 3391 |
| HgaI | GACGC | 5 cut(s) | 199, 1207, 1469, 1593, 3810 |
| HhaI | GCGC | 4 cut(s) | 1600, 3043, 3198, 3238 |
| Hin1I | GRCGYC | 4 cut(s) | 1198, 1218, 3137, 3821 |
| Hin6I | GCGC | 4 cut(s) | 1598, 3041, 3196, 3236 |
| HinP1I | GCGC | 4 cut(s) | 1598, 3041, 3196, 3236 |
| HincII | GTYRAC | 2 cut(s) | 1658, 3063 |
| HindII | GTYRAC | 2 cut(s) | 1658, 3063 |
| HindIII | AAGCTT | 2 cut(s) | 886, 1419 |
| HpaI | GTTAAC | 1 cut(s) | 3063 |
| HphI | GGTGA | 7 cut(s) | 316, 497, 887, 2378, 2884, 2999, 3659 |
| HpyCH4III | ACNGT | 9 cut(s) | 1391, 1588, 2096, 2394, 2452, 2551, 3011, 3207, 3377 |
| HpyCH4IV | ACGT | 7 cut(s) | 919, 1198, 1327, 2791, 2808, 2849, 3137 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 1034, 1682, 2336, 2345, 2354, 3122, 3482, 3696 |
| HpySE526I | ACGT | 7 cut(s) | 919, 1198, 1327, 2791, 2808, 2849, 3137 |
| Hsp92I | GRCGYC | 4 cut(s) | 1198, 1218, 3137, 3821 |
| HspAI | GCGC | 4 cut(s) | 1598, 3041, 3196, 3236 |
| Kpn2I | TCCGGA | 2 cut(s) | 401, 2101 |
| KpnI | GGTACC | 1 cut(s) | 1406 |
| Ksp22I | TGATCA | 3 cut(s) | 2185, 2371, 2802 |
| KspAI | GTTAAC | 1 cut(s) | 3063 |
| LguI | GCTCTTC | 1 cut(s) | 1605 |
| Lsp1109I | GCAGC | 9 cut(s) | 1049, 1240, 1381, 1447, 1988, 2360, 3497, 3511, 3538 |
| MabI | ACCWGGT | 1 cut(s) | 1044 |
| MaeII | ACGT | 7 cut(s) | 919, 1198, 1327, 2791, 2808, 2849, 3137 |
| MaeIII | GTNAC | 7 cut(s) | 485, 596, 875, 1385, 1757, 2855, 3590 |
| MbiI | CCGCTC | 1 cut(s) | 1376 |
| MfeI | CAATTG | 2 cut(s) | 2259, 3579 |
| MflI | RGATCY | 9 cut(s) | 44, 77, 398, 677, 2228, 2407, 2716, 2896, 3454 |
| MhlI | GDGCHC | 4 cut(s) | 497, 856, 1991, 3078 |
| MlyI | GAGTC | 6 cut(s) | 818, 1347, 1663, 2215, 2461, 3767 |
| MmeI | TCCRAC | 4 cut(s) | 114, 151, 1853, 2264 |
| MroI | TCCGGA | 2 cut(s) | 401, 2101 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1549 |
| MseI | TTAA | 6 cut(s) | 198, 390, 3062, 3446, 3513, 3801 |
| MslI | CAYNNNNRTG | 2 cut(s) | 790, 2508 |
| MspA1I | CMGCKG | 3 cut(s) | 1040, 1679, 3488 |
| MspR9I | CCNGG | 8 cut(s) | 162, 873, 1046, 1146, 1214, 1215, 1555, 2364 |
| MunI | CAATTG | 2 cut(s) | 2259, 3579 |
| Mva1269I | GAATGC | 4 cut(s) | 1345, 2770, 2989, 3740 |
| MvaI | CCWGG | 5 cut(s) | 162, 873, 1046, 1146, 1555 |
| MvnI | CGCG | 2 cut(s) | 2068, 2620 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 1034, 1682, 2336, 2345, 2354, 3122, 3482, 3696 |
| NciI | CCSGG | 3 cut(s) | 1214, 1215, 2364 |
| NcoI | CCATGG | 1 cut(s) | 3386 |
| NdeI | CATATG | 2 cut(s) | 787, 2505 |
| NlaIV | GGNNCC | 5 cut(s) | 88, 650, 1404, 2176, 3654 |
| NmeAIII | GCCGAG | 1 cut(s) | 1392 |
| NmuCI | GTSAC | 4 cut(s) | 485, 596, 875, 2855 |
| NruI | TCGCGA | 1 cut(s) | 2068 |
| NsbI | TGCGCA | 1 cut(s) | 3042 |
| NspI | RCATGY | 1 cut(s) | 2089 |
| NspV | TTCGAA | 1 cut(s) | 32 |
| PaeR7I | CTCGAG | 1 cut(s) | 3700 |
| PagI | TCATGA | 3 cut(s) | 895, 1717, 3712 |
| PceI | AGGCCT | 1 cut(s) | 2251 |
| PciSI | GCTCTTC | 1 cut(s) | 1605 |
| PctI | GAATGC | 4 cut(s) | 1345, 2770, 2989, 3740 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1549 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 3852 |
| PfoI | TCCNGGA | 3 cut(s) | 160, 1144, 1553 |
| PleI | GAGTC | 6 cut(s) | 817, 1346, 1662, 2215, 2461, 3766 |
| PmaCI | CACGTG | 1 cut(s) | 2850 |
| PmlI | CACGTG | 1 cut(s) | 2850 |
| PpsI | GAGTC | 6 cut(s) | 817, 1346, 1662, 2215, 2461, 3766 |
| Ppu21I | YACGTR | 1 cut(s) | 2850 |
| PpuMI | RGGWCCY | 1 cut(s) | 338 |
| Psp1406I | AACGTT | 1 cut(s) | 2808 |
| Psp5II | RGGWCCY | 1 cut(s) | 338 |
| Psp6I | CCWGG | 5 cut(s) | 160, 871, 1044, 1144, 1553 |
| PspCI | CACGTG | 1 cut(s) | 2850 |
| PspFI | CCCAGC | 2 cut(s) | 545, 1296 |
| PspGI | CCWGG | 5 cut(s) | 160, 871, 1044, 1144, 1553 |
| PspN4I | GGNNCC | 5 cut(s) | 88, 650, 1404, 2176, 3654 |
| PspPI | GGNCC | 8 cut(s) | 338, 404, 638, 746, 1042, 2174, 2601, 3119 |
| PspPPI | RGGWCCY | 1 cut(s) | 338 |
| PspXI | VCTCGAGB | 1 cut(s) | 3700 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 1302, 1334, 1461, 1493 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1925 |
| PsuI | RGATCY | 9 cut(s) | 44, 77, 398, 677, 2228, 2407, 2716, 2896, 3454 |
| PvuII | CAGCTG | 1 cut(s) | 3488 |
| RruI | TCGCGA | 1 cut(s) | 2068 |
| RseI | CAYNNNNRTG | 2 cut(s) | 790, 2508 |
| SalI | GTCGAC | 1 cut(s) | 1656 |
| SapI | GCTCTTC | 1 cut(s) | 1605 |
| SaqAI | TTAA | 6 cut(s) | 198, 390, 3062, 3446, 3513, 3801 |
| Sau96I | GGNCC | 8 cut(s) | 338, 404, 638, 746, 1042, 2174, 2601, 3119 |
| SchI | GAGTC | 6 cut(s) | 818, 1347, 1663, 2215, 2461, 3767 |
| ScrFI | CCNGG | 8 cut(s) | 162, 873, 1046, 1146, 1214, 1215, 1555, 2364 |
| SduI | GDGCHC | 4 cut(s) | 497, 856, 1991, 3078 |
| SexAI | ACCWGGT | 1 cut(s) | 1044 |
| SfcI | CTRYAG | 2 cut(s) | 1350, 3771 |
| Sfr274I | CTCGAG | 1 cut(s) | 3700 |
| SfuI | TTCGAA | 1 cut(s) | 32 |
| SinI | GGWCC | 7 cut(s) | 338, 404, 638, 1042, 2174, 2601, 3119 |
| SlaI | CTCGAG | 1 cut(s) | 3700 |
| SmaI | CCCGGG | 1 cut(s) | 1215 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 790, 2508 |
| SmlI | CTYRAG | 4 cut(s) | 1058, 1223, 2596, 3700 |
| SmoI | CTYRAG | 4 cut(s) | 1058, 1223, 2596, 3700 |
| SseBI | AGGCCT | 1 cut(s) | 2251 |
| SspI | AATATT | 4 cut(s) | 1747, 2984, 3357, 3367 |
| StuI | AGGCCT | 1 cut(s) | 2251 |
| StyD4I | CCNGG | 8 cut(s) | 160, 871, 1044, 1144, 1212, 1213, 1553, 2362 |
| StyI | CCWWGG | 4 cut(s) | 135, 2048, 2246, 3386 |
| TaaI | ACNGT | 9 cut(s) | 1391, 1588, 2096, 2394, 2452, 2551, 3011, 3207, 3377 |
| TaiI | ACGT | 7 cut(s) | 922, 1201, 1330, 2794, 2811, 2852, 3140 |
| TaqI | TCGA | 9 cut(s) | 32, 281, 464, 589, 682, 950, 1123, 1657, 3701 |
| TaqII | GACCGA | 1 cut(s) | 3453 |
| TatI | WGTACW | 4 cut(s) | 1265, 1318, 1862, 2611 |
| TauI | GCSGC | 4 cut(s) | 670, 1679, 1982, 3173 |
| Tru1I | TTAA | 6 cut(s) | 198, 390, 3062, 3446, 3513, 3801 |
| Tru9I | TTAA | 6 cut(s) | 198, 390, 3062, 3446, 3513, 3801 |
| TscAI | CASTG | 6 cut(s) | 856, 1169, 1396, 1584, 2554, 3697 |
| TseFI | GTSAC | 4 cut(s) | 485, 596, 875, 2855 |
| TseI | GCWGC | 9 cut(s) | 1037, 1228, 1394, 1435, 1976, 2348, 3485, 3499, 3551 |
| Tsp45I | GTSAC | 4 cut(s) | 485, 596, 875, 2855 |
| TspGWI | ACGGA | 2 cut(s) | 2477, 2936 |
| TspMI | CCCGGG | 1 cut(s) | 1213 |
| TspRI | CASTG | 6 cut(s) | 856, 1169, 1396, 1584, 2554, 3697 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 3852 |
| VpaK11BI | GGWCC | 7 cut(s) | 338, 404, 638, 1042, 2174, 2601, 3119 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 633 |
| XapI | RAATTY | 7 cut(s) | 757, 781, 989, 2917, 3243, 3321, 3873 |
| XceI | RCATGY | 1 cut(s) | 2089 |
| XhoI | CTCGAG | 1 cut(s) | 3700 |
| XmaI | CCCGGG | 1 cut(s) | 1213 |
| XmaJI | CCTAGG | 1 cut(s) | 2246 |
| XmiI | GTMKAC | 2 cut(s) | 1657, 2779 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1549 |
| ZraI | GACGTC | 2 cut(s) | 1199, 3138 |