TPR repeat-containing thioredoxin
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| 5_nucleotid | PF05761 | 48 - 536 | 9.4e-177 | 5' nucleotidase family |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 17 |
| Acc36I | ACCTGC | 2 cut(s) | 17, 678 |
| AccI | GTMKAC | 1 cut(s) | 1526 |
| AccII | CGCG | 2 cut(s) | 292, 294 |
| AciI | CCGC | 3 cut(s) | 290, 1243, 1399 |
| AclWI | GGATC | 4 cut(s) | 150, 387, 674, 1137 |
| AcsI | RAATTY | 2 cut(s) | 802, 1604 |
| AcuI | CTGAAG | 2 cut(s) | 546, 1337 |
| AcvI | CACGTG | 1 cut(s) | 92 |
| AfaI | GTAC | 3 cut(s) | 326, 823, 1556 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 113, 114, 1285 |
| AflIII | ACRYGT | 1 cut(s) | 91 |
| AhlI | ACTAGT | 1 cut(s) | 1529 |
| AjnI | CCWGG | 4 cut(s) | 571, 898, 993, 1056 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 426, 458 |
| AleI | CACNNNNGTG | 1 cut(s) | 94 |
| AluBI | AGCT | 4 cut(s) | 42, 524, 626, 1201 |
| AluI | AGCT | 4 cut(s) | 42, 524, 626, 1201 |
| Alw21I | GWGCWC | 2 cut(s) | 44, 1111 |
| Alw26I | GTCTC | 3 cut(s) | 11, 1317, 1386 |
| Alw44I | GTGCAC | 1 cut(s) | 1107 |
| AlwI | GGATC | 4 cut(s) | 150, 387, 674, 1137 |
| AoxI | GGCC | 1 cut(s) | 990 |
| ApaLI | GTGCAC | 1 cut(s) | 1107 |
| ApeKI | GCWGC | 1 cut(s) | 626 |
| ApoI | RAATTY | 2 cut(s) | 802, 1604 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 296, 328 |
| AseI | ATTAAT | 2 cut(s) | 696, 966 |
| AspLEI | GCGC | 1 cut(s) | 294 |
| AspS9I | GGNCC | 1 cut(s) | 991 |
| AsuC2I | CCSGG | 2 cut(s) | 108, 1562 |
| AsuHPI | GGTGA | 4 cut(s) | 41, 89, 343, 1154 |
| AsuII | TTCGAA | 1 cut(s) | 1541 |
| BaeGI | GKGCMC | 1 cut(s) | 1111 |
| BanII | GRGCYC | 2 cut(s) | 44, 1393 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 389, 421 |
| BauI | CACGAG | 1 cut(s) | 14 |
| BbrPI | CACGTG | 1 cut(s) | 92 |
| BbsI | GAAGAC | 1 cut(s) | 1475 |
| Bbv12I | GWGCWC | 2 cut(s) | 44, 1111 |
| BbvCI | CCTCAGC | 1 cut(s) | 1338 |
| BbvI | GCAGC | 1 cut(s) | 613 |
| BccI | CCATC | 4 cut(s) | 370, 644, 824, 908 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 5, 39 |
| BciT130I | CCWGG | 4 cut(s) | 573, 900, 995, 1058 |
| BciVI | GTATCC | 1 cut(s) | 278 |
| BclI | TGATCA | 1 cut(s) | 79 |
| BcnI | CCSGG | 2 cut(s) | 108, 1562 |
| BcoDI | GTCTC | 3 cut(s) | 11, 1317, 1386 |
| BcuI | ACTAGT | 1 cut(s) | 1529 |
| BfaI | CTAG | 5 cut(s) | 131, 521, 684, 1202, 1530 |
| BfmI | CTRYAG | 2 cut(s) | 627, 1573 |
| BfuAI | ACCTGC | 2 cut(s) | 17, 678 |
| BfuI | GTATCC | 1 cut(s) | 278 |
| BisI | GCNGC | 1 cut(s) | 627 |
| BlpI | GCTNAGC | 1 cut(s) | 1419 |
| BlsI | GCNGC | 1 cut(s) | 628 |
| Bme1390I | CCNGG | 6 cut(s) | 108, 573, 900, 995, 1058, 1562 |
| BmgT120I | GGNCC | 1 cut(s) | 991 |
| BmiI | GGNNCC | 1 cut(s) | 582 |
| BmrFI | CCNGG | 6 cut(s) | 108, 573, 900, 995, 1058, 1562 |
| BmrI | ACTGGG | 1 cut(s) | 1575 |
| BmsI | GCATC | 3 cut(s) | 948, 1306, 1405 |
| BmuI | ACTGGG | 1 cut(s) | 1575 |
| BpiI | GAAGAC | 1 cut(s) | 1475 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1338 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1419 |
| Bpu14I | TTCGAA | 1 cut(s) | 1541 |
| BpuEI | CTTGAG | 2 cut(s) | 1377, 1567 |
| BpuMI | CCSGG | 2 cut(s) | 108, 1562 |
| BsaAI | YACGTR | 2 cut(s) | 92, 821 |
| BsaBI | GATNNNNATC | 1 cut(s) | 918 |
| BsaI | GGTCTC | 1 cut(s) | 1317 |
| BsaJI | CCNNGG | 4 cut(s) | 409, 993, 1057, 1560 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1053, 1083 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 113, 114, 1285 |
| Bse118I | RCCGGY | 1 cut(s) | 1012 |
| Bse1I | ACTGG | 5 cut(s) | 311, 860, 889, 1477, 1581 |
| Bse8I | GATNNNNATC | 1 cut(s) | 918 |
| BseBI | CCWGG | 4 cut(s) | 573, 900, 995, 1058 |
| BseDI | CCNNGG | 4 cut(s) | 409, 993, 1057, 1560 |
| BseGI | GGATG | 2 cut(s) | 835, 963 |
| BseJI | GATNNNNATC | 1 cut(s) | 918 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 113, 114, 1285 |
| BseMII | CTCAG | 2 cut(s) | 1329, 1433 |
| BseNI | ACTGG | 5 cut(s) | 311, 860, 889, 1477, 1581 |
| BseRI | GAGGAG | 2 cut(s) | 126, 1355 |
| BseSI | GKGCMC | 1 cut(s) | 1111 |
| BseXI | GCAGC | 1 cut(s) | 613 |
| BsgI | GTGCAG | 1 cut(s) | 41 |
| Bsh1236I | CGCG | 2 cut(s) | 292, 294 |
| BshFI | GGCC | 1 cut(s) | 992 |
| BsiHKAI | GWGCWC | 2 cut(s) | 44, 1111 |
| BsiSI | CCGG | 3 cut(s) | 108, 1013, 1562 |
| BslFI | GGGAC | 2 cut(s) | 794, 1470 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 113, 114, 1285 |
| BsmAI | GTCTC | 3 cut(s) | 11, 1317, 1386 |
| BsmFI | GGGAC | 2 cut(s) | 794, 1470 |
| BsmI | GAATGC | 1 cut(s) | 1016 |
| BsnI | GGCC | 1 cut(s) | 992 |
| Bso31I | GGTCTC | 1 cut(s) | 1317 |
| Bsp119I | TTCGAA | 1 cut(s) | 1541 |
| Bsp1286I | GDGCHC | 3 cut(s) | 44, 1111, 1393 |
| Bsp143I | GATC | 7 cut(s) | 79, 127, 155, 379, 679, 749, 1129 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1419 |
| Bsp19I | CCATGG | 1 cut(s) | 409 |
| BspACI | CCGC | 3 cut(s) | 290, 1243, 1399 |
| BspANI | GGCC | 1 cut(s) | 992 |
| BspCNI | CTCAG | 2 cut(s) | 1330, 1432 |
| BspFNI | CGCG | 2 cut(s) | 292, 294 |
| BspHI | TCATGA | 1 cut(s) | 1464 |
| BspLI | GGNNCC | 1 cut(s) | 582 |
| BspMAI | CTGCAG | 1 cut(s) | 631 |
| BspMI | ACCTGC | 2 cut(s) | 17, 678 |
| BspPI | GGATC | 4 cut(s) | 150, 387, 674, 1137 |
| BspT104I | TTCGAA | 1 cut(s) | 1541 |
| BspTNI | GGTCTC | 1 cut(s) | 1317 |
| BsrFI | RCCGGY | 1 cut(s) | 1012 |
| BsrI | ACTGG | 5 cut(s) | 311, 860, 889, 1477, 1581 |
| BssAI | RCCGGY | 1 cut(s) | 1012 |
| BssECI | CCNNGG | 4 cut(s) | 409, 993, 1057, 1560 |
| BssMI | GATC | 7 cut(s) | 79, 127, 155, 379, 679, 749, 1129 |
| BssNAI | GTATAC | 1 cut(s) | 1527 |
| BssSI | CACGAG | 1 cut(s) | 14 |
| BssT1I | CCWWGG | 1 cut(s) | 409 |
| Bst1107I | GTATAC | 1 cut(s) | 1527 |
| Bst2BI | CACGAG | 1 cut(s) | 14 |
| Bst2UI | CCWGG | 4 cut(s) | 573, 900, 995, 1058 |
| Bst4CI | ACNGT | 5 cut(s) | 22, 259, 647, 773, 1353 |
| Bst6I | CTCTTC | 1 cut(s) | 350 |
| BstBAI | YACGTR | 2 cut(s) | 92, 821 |
| BstBI | TTCGAA | 1 cut(s) | 1541 |
| BstC8I | GCNNGC | 3 cut(s) | 1045, 1247, 1519 |
| BstDEI | CTNAG | 5 cut(s) | 429, 467, 734, 1338, 1419 |
| BstDSI | CCRYGG | 1 cut(s) | 409 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1283 |
| BstF5I | GGATG | 2 cut(s) | 835, 963 |
| BstFNI | CGCG | 2 cut(s) | 292, 294 |
| BstHHI | GCGC | 1 cut(s) | 294 |
| BstKTI | GATC | 7 cut(s) | 82, 130, 158, 382, 682, 752, 1132 |
| BstMAI | GTCTC | 3 cut(s) | 11, 1317, 1386 |
| BstMBI | GATC | 7 cut(s) | 79, 127, 155, 379, 679, 749, 1129 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 298, 730 |
| BstNI | CCWGG | 4 cut(s) | 573, 900, 995, 1058 |
| BstNSI | RCATGY | 1 cut(s) | 1597 |
| BstSCI | CCNGG | 6 cut(s) | 106, 571, 898, 993, 1056, 1560 |
| BstSFI | CTRYAG | 2 cut(s) | 627, 1573 |
| BstSLI | GKGCMC | 1 cut(s) | 1111 |
| BstUI | CGCG | 2 cut(s) | 292, 294 |
| BstV1I | GCAGC | 1 cut(s) | 613 |
| BstV2I | GAAGAC | 1 cut(s) | 1475 |
| BstX2I | RGATCY | 1 cut(s) | 679 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 96, 650 |
| BstYI | RGATCY | 1 cut(s) | 679 |
| BstZ17I | GTATAC | 1 cut(s) | 1527 |
| BsuI | GTATCC | 1 cut(s) | 278 |
| BsuRI | GGCC | 1 cut(s) | 992 |
| BtgI | CCRYGG | 1 cut(s) | 409 |
| BtsCI | GGATG | 2 cut(s) | 835, 963 |
| BtsI | GCAGTG | 3 cut(s) | 189, 895, 1072 |
| BtsIMutI | CAGTG | 7 cut(s) | 189, 255, 882, 895, 1072, 1339, 1588 |
| BveI | ACCTGC | 2 cut(s) | 17, 678 |
| Cac8I | GCNNGC | 3 cut(s) | 1045, 1247, 1519 |
| CciI | TCATGA | 1 cut(s) | 1464 |
| CfoI | GCGC | 1 cut(s) | 294 |
| Cfr10I | RCCGGY | 1 cut(s) | 1012 |
| Cfr13I | GGNCC | 1 cut(s) | 991 |
| Csp6I | GTAC | 3 cut(s) | 325, 822, 1555 |
| CviQI | GTAC | 3 cut(s) | 325, 822, 1555 |
| DdeI | CTNAG | 5 cut(s) | 429, 467, 734, 1338, 1419 |
| DpnI | GATC | 7 cut(s) | 81, 129, 157, 381, 681, 751, 1131 |
| DpnII | GATC | 7 cut(s) | 79, 127, 155, 379, 679, 749, 1129 |
| DraI | TTTAAA | 2 cut(s) | 559, 660 |
| Eam1104I | CTCTTC | 1 cut(s) | 350 |
| EarI | CTCTTC | 1 cut(s) | 350 |
| Ecl136II | GAGCTC | 1 cut(s) | 42 |
| Eco130I | CCWWGG | 1 cut(s) | 409 |
| Eco24I | GRGCYC | 2 cut(s) | 44, 1393 |
| Eco31I | GGTCTC | 1 cut(s) | 1317 |
| Eco32I | GATATC | 1 cut(s) | 1330 |
| Eco53kI | GAGCTC | 1 cut(s) | 42 |
| Eco57I | CTGAAG | 2 cut(s) | 546, 1337 |
| Eco72I | CACGTG | 1 cut(s) | 92 |
| EcoICRI | GAGCTC | 1 cut(s) | 42 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1283 |
| EcoRII | CCWGG | 4 cut(s) | 571, 898, 993, 1056 |
| EcoRV | GATATC | 1 cut(s) | 1330 |
| EcoT14I | CCWWGG | 1 cut(s) | 409 |
| EcoT22I | ATGCAT | 1 cut(s) | 1299 |
| EcoT38I | GRGCYC | 2 cut(s) | 44, 1393 |
| ErhI | CCWWGG | 1 cut(s) | 409 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 128, 160, 887, 919 |
| FaqI | GGGAC | 2 cut(s) | 794, 1470 |
| FauI | CCCGC | 2 cut(s) | 297, 1250 |
| FauNDI | CATATG | 1 cut(s) | 247 |
| FbaI | TGATCA | 1 cut(s) | 79 |
| FblI | GTMKAC | 1 cut(s) | 1526 |
| Fnu4HI | GCNGC | 1 cut(s) | 627 |
| FokI | GGATG | 2 cut(s) | 842, 970 |
| FriOI | GRGCYC | 2 cut(s) | 44, 1393 |
| Fsp4HI | GCNGC | 1 cut(s) | 627 |
| FspBI | CTAG | 5 cut(s) | 131, 521, 684, 1202, 1530 |
| GlaI | GCGC | 1 cut(s) | 293 |
| GluI | GCNGC | 1 cut(s) | 627 |
| HaeIII | GGCC | 1 cut(s) | 992 |
| HapII | CCGG | 3 cut(s) | 108, 1013, 1562 |
| HhaI | GCGC | 1 cut(s) | 294 |
| Hin6I | GCGC | 1 cut(s) | 292 |
| HinP1I | GCGC | 1 cut(s) | 292 |
| HincII | GTYRAC | 1 cut(s) | 553 |
| HindII | GTYRAC | 1 cut(s) | 553 |
| HinfI | GANTC | 8 cut(s) | 236, 414, 473, 740, 815, 950, 1100, 1379 |
| HpaII | CCGG | 3 cut(s) | 108, 1013, 1562 |
| HphI | GGTGA | 4 cut(s) | 41, 89, 343, 1154 |
| Hpy166II | GTNNAC | 3 cut(s) | 553, 1109, 1527 |
| Hpy188I | TCNGA | 3 cut(s) | 1317, 1363, 1482 |
| Hpy188III | TCNNGA | 7 cut(s) | 83, 262, 347, 370, 1196, 1412, 1465 |
| Hpy8I | GTNNAC | 3 cut(s) | 553, 1109, 1527 |
| HpyAV | CCTTC | 3 cut(s) | 245, 391, 1021 |
| HpyCH4III | ACNGT | 5 cut(s) | 22, 259, 647, 773, 1353 |
| HpyCH4IV | ACGT | 3 cut(s) | 91, 820, 1273 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 298, 730 |
| HpyF3I | CTNAG | 5 cut(s) | 429, 467, 734, 1338, 1419 |
| HpySE526I | ACGT | 3 cut(s) | 91, 820, 1273 |
| HspAI | GCGC | 1 cut(s) | 292 |
| Ksp22I | TGATCA | 1 cut(s) | 79 |
| Kzo9I | GATC | 7 cut(s) | 79, 127, 155, 379, 679, 749, 1129 |
| Lsp1109I | GCAGC | 1 cut(s) | 613 |
| LweI | GCATC | 3 cut(s) | 948, 1306, 1405 |
| MaeI | CTAG | 5 cut(s) | 131, 521, 684, 1202, 1530 |
| MaeII | ACGT | 3 cut(s) | 91, 820, 1273 |
| MaeIII | GTNAC | 4 cut(s) | 29, 763, 816, 1274 |
| MalI | GATC | 7 cut(s) | 81, 129, 157, 381, 681, 751, 1131 |
| MboI | GATC | 7 cut(s) | 79, 127, 155, 379, 679, 749, 1129 |
| MfeI | CAATTG | 2 cut(s) | 545, 1095 |
| MflI | RGATCY | 1 cut(s) | 679 |
| MhlI | GDGCHC | 3 cut(s) | 44, 1111, 1393 |
| MluCI | AATT | 9 cut(s) | 123, 266, 545, 802, 847, 963, 1095, 1229, 1604 |
| MlyI | GAGTC | 4 cut(s) | 824, 959, 1109, 1388 |
| MmeI | TCCRAC | 1 cut(s) | 979 |
| Mph1103I | ATGCAT | 1 cut(s) | 1299 |
| MseI | TTAA | 5 cut(s) | 558, 659, 696, 966, 1232 |
| MslI | CAYNNNNRTG | 6 cut(s) | 94, 390, 648, 797, 1137, 1413 |
| MspI | CCGG | 3 cut(s) | 108, 1013, 1562 |
| MspR9I | CCNGG | 6 cut(s) | 108, 573, 900, 995, 1058, 1562 |
| MunI | CAATTG | 2 cut(s) | 545, 1095 |
| Mva1269I | GAATGC | 1 cut(s) | 1016 |
| MvaI | CCWGG | 4 cut(s) | 573, 900, 995, 1058 |
| MvnI | CGCG | 2 cut(s) | 292, 294 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 298, 730 |
| NciI | CCSGG | 2 cut(s) | 108, 1562 |
| NcoI | CCATGG | 1 cut(s) | 409 |
| NdeI | CATATG | 1 cut(s) | 247 |
| NdeII | GATC | 7 cut(s) | 79, 127, 155, 379, 679, 749, 1129 |
| NlaIV | GGNNCC | 1 cut(s) | 582 |
| NmuCI | GTSAC | 3 cut(s) | 29, 816, 1274 |
| NsiI | ATGCAT | 1 cut(s) | 1299 |
| NspI | RCATGY | 1 cut(s) | 1597 |
| NspV | TTCGAA | 1 cut(s) | 1541 |
| OliI | CACNNNNGTG | 1 cut(s) | 94 |
| PagI | TCATGA | 1 cut(s) | 1464 |
| PaqCI | CACCTGC | 1 cut(s) | 17 |
| PctI | GAATGC | 1 cut(s) | 1016 |
| PfeI | GAWTC | 4 cut(s) | 236, 414, 473, 740 |
| PfoI | TCCNGGA | 2 cut(s) | 106, 571 |
| PkrI | GCNGC | 1 cut(s) | 628 |
| PleI | GAGTC | 4 cut(s) | 823, 958, 1108, 1387 |
| PmaCI | CACGTG | 1 cut(s) | 92 |
| PmlI | CACGTG | 1 cut(s) | 92 |
| PpsI | GAGTC | 4 cut(s) | 823, 958, 1108, 1387 |
| Ppu21I | YACGTR | 2 cut(s) | 92, 821 |
| PshBI | ATTAAT | 2 cut(s) | 696, 966 |
| Psp124BI | GAGCTC | 1 cut(s) | 44 |
| Psp6I | CCWGG | 4 cut(s) | 571, 898, 993, 1056 |
| PspCI | CACGTG | 1 cut(s) | 92 |
| PspGI | CCWGG | 4 cut(s) | 571, 898, 993, 1056 |
| PspN4I | GGNNCC | 1 cut(s) | 582 |
| PspPI | GGNCC | 1 cut(s) | 991 |
| PstI | CTGCAG | 1 cut(s) | 631 |
| PsuI | RGATCY | 1 cut(s) | 679 |
| RsaI | GTAC | 3 cut(s) | 326, 823, 1556 |
| RsaNI | GTAC | 3 cut(s) | 325, 822, 1555 |
| RseI | CAYNNNNRTG | 6 cut(s) | 94, 390, 648, 797, 1137, 1413 |
| SacI | GAGCTC | 1 cut(s) | 44 |
| SaqAI | TTAA | 5 cut(s) | 558, 659, 696, 966, 1232 |
| SatI | GCNGC | 1 cut(s) | 627 |
| Sau3AI | GATC | 7 cut(s) | 79, 127, 155, 379, 679, 749, 1129 |
| Sau96I | GGNCC | 1 cut(s) | 991 |
| SchI | GAGTC | 4 cut(s) | 824, 959, 1109, 1388 |
| ScrFI | CCNGG | 6 cut(s) | 108, 573, 900, 995, 1058, 1562 |
| SduI | GDGCHC | 3 cut(s) | 44, 1111, 1393 |
| SfaNI | GCATC | 3 cut(s) | 948, 1306, 1405 |
| SfcI | CTRYAG | 2 cut(s) | 627, 1573 |
| SfuI | TTCGAA | 1 cut(s) | 1541 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 94, 390, 648, 797, 1137, 1413 |
| SmlI | CTYRAG | 2 cut(s) | 1392, 1546 |
| SmoI | CTYRAG | 2 cut(s) | 1392, 1546 |
| SpeI | ACTAGT | 1 cut(s) | 1529 |
| Sse9I | AATT | 9 cut(s) | 123, 266, 545, 802, 847, 963, 1095, 1229, 1604 |
| SsiI | CCGC | 3 cut(s) | 290, 1243, 1399 |
| SspI | AATATT | 1 cut(s) | 175 |
| SspMI | CTAG | 5 cut(s) | 131, 521, 684, 1202, 1530 |
| SstI | GAGCTC | 1 cut(s) | 44 |
| StyD4I | CCNGG | 6 cut(s) | 106, 571, 898, 993, 1056, 1560 |
| StyI | CCWWGG | 1 cut(s) | 409 |
| TaaI | ACNGT | 5 cut(s) | 22, 259, 647, 773, 1353 |
| TaiI | ACGT | 3 cut(s) | 94, 823, 1276 |
| TaqI | TCGA | 7 cut(s) | 44, 276, 594, 622, 852, 1255, 1541 |
| TasI | AATT | 9 cut(s) | 123, 266, 545, 802, 847, 963, 1095, 1229, 1604 |
| TatI | WGTACW | 2 cut(s) | 324, 1554 |
| TfiI | GAWTC | 4 cut(s) | 236, 414, 473, 740 |
| Tru1I | TTAA | 5 cut(s) | 558, 659, 696, 966, 1232 |
| Tru9I | TTAA | 5 cut(s) | 558, 659, 696, 966, 1232 |
| TscAI | CASTG | 7 cut(s) | 189, 262, 889, 895, 1072, 1339, 1588 |
| TseFI | GTSAC | 3 cut(s) | 29, 816, 1274 |
| TseI | GCWGC | 1 cut(s) | 626 |
| Tsp45I | GTSAC | 3 cut(s) | 29, 816, 1274 |
| TspDTI | ATGAA | 8 cut(s) | 182, 264, 714, 815, 1070, 1284, 1481, 1617 |
| TspRI | CASTG | 7 cut(s) | 189, 262, 889, 895, 1072, 1339, 1588 |
| VneI | GTGCAC | 1 cut(s) | 1107 |
| VspI | ATTAAT | 2 cut(s) | 696, 966 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1283 |
| XapI | RAATTY | 2 cut(s) | 802, 1604 |
| XceI | RCATGY | 1 cut(s) | 1597 |
| XmiI | GTMKAC | 1 cut(s) | 1526 |
| XspI | CTAG | 5 cut(s) | 131, 521, 684, 1202, 1530 |
| Zsp2I | ATGCAT | 1 cut(s) | 1299 |