Rh4CG427700

TIFY 6B-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
Physical Location & Seq
Forward (+)
66973485 .. 66976398
2914 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG427700.1

Sequence Viewer

Length: 1173 bp
ATGATGGAGAGAGATTTCATGGGTTTGAGCTCGAGAGAGTCGGTGGCTGTGATCAAGGAGGAGAATATTGACGATGCTTGCAGAGACTCTGGTGGGTTGACCAGAGGTGCTGGTTCGAATTGGCCCTTCTCAAACAAGGTCTCTGCAATTCCTCATCATTTGATGTCTTCCAAAGGTGCTCAAGAAGGTAAGACTCAAAAGATGGTACCTGAGTCCTTCTTGTCTTCCGGATTTATGCCCGTCTCAACTTCAGACGCATTTGATCCTTGTCAGAAACGACCTACATGTGATGCACAGAAGTACTTCAATCACGATAGGCAAGGTGGCACTCACTTTACCCTGACAGCTTATCCTATGCAACATGATGTGCACTCTGTACACCGTCCTTATGACATGAAGATGATTTCAGTTTCCAATCAAGGTATTTCTGTTCCTATGGGCAATCTATACTTGAAGAATCATTTTGCATCTATGGGTCAGAATTTTGCTGTTACTACCACCAAGCAACAATTATTTGGAGGAGTTCCTGTTACTACTCCATATTCAGTTCCTCCAAGTTCAGGGTCCATTGTTGGAACCACTGAACCATGGAACAACGTCAAGGCATCTGGGTCTCCTTCTCAGATGACAATCTTCTATGCTGGTAGTGTGAATGTCTATCATGATATCTCCCCTGAGAAGGCTCAGGCTATGATGATTTTAGCTCAGAATGGTTCTTCCATCCCTTCTAATGGTGCACACTCAAAAGCTGAAGCACCAAGAGCAAAGTTGGCCGCGGAAGATGGTGTTCCAGTGAATCAGACTATAAATACACCACCTTCTGCTTTTCCTAGTCCCTTATCTGTTTCTTCACATACTGGTACCCAATCAGTAAGTGGGTCCACAAGCACTGATGAACTGATGGCAGCTAAAACCACAGGGCTTCCAACGACTCCTGTTAGTAAAGTGGAGCCTCCAAAAACAGCAAATGCAGTTAAATCTGTTGCTGCAACATCTATGGTTAATTCTGCTATTCCACAAGCTCGCAAAGCATCCTTGGCTCGATTTTTAGGGAAACGCAAGGAAAGGGTAATAAATTCAGCACCATACAACTTGAGCAAGAAATCTGCAGAAGGCAGCAACCCAGAATCTAATGGAATGAATTCCTGTGCAAGCAAAGGAGAGCAACAATGA

Protein Analysis

390

Amino Acids

41.45

Weight (kDa)

9.12

Isoelectric Point (pI)

43.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
tify PF06200 205 - 235 5.8e-14 tify domain
Jas_motif PF09425 339 - 363 1.5e-12 Jas motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 205, 860
AccB1I GGYRCC 2 cut(s) 205, 860
AccII CGCG 1 cut(s) 776
AccIII TCCGGA 1 cut(s) 227
AciI CCGC 2 cut(s) 774, 776
AclWI GGATC 1 cut(s) 257
AcoI YGGCCR 1 cut(s) 771
AcsI RAATTY 3 cut(s) 481, 1075, 1141
AcuI CTGAAG 2 cut(s) 234, 771
AfaI GTAC 4 cut(s) 207, 302, 378, 862
AfiI CCNNNNNNNGG 3 cut(s) 560, 679, 731
AflIII ACRYGT 1 cut(s) 284
AgsI TTSAA 2 cut(s) 307, 454
AluBI AGCT 6 cut(s) 30, 347, 704, 749, 908, 1022
AluI AGCT 6 cut(s) 30, 347, 704, 749, 908, 1022
Alw21I GWGCWC 4 cut(s) 32, 181, 372, 739
Alw26I GTCTC 4 cut(s) 78, 145, 247, 618
Alw44I GTGCAC 2 cut(s) 368, 735
AlwI GGATC 1 cut(s) 257
Ama87I CYCGRG 1 cut(s) 31
Aor13HI TCCGGA 1 cut(s) 227
AoxI GGCC 2 cut(s) 122, 771
ApaLI GTGCAC 2 cut(s) 368, 735
ApeKI GCWGC 3 cut(s) 905, 986, 1116
ApoI RAATTY 3 cut(s) 481, 1075, 1141
Asp700I GAANNNNTTC 2 cut(s) 302, 1141
Asp718I GGTACC 2 cut(s) 205, 860
AspS9I GGNCC 3 cut(s) 123, 564, 879
AsuII TTCGAA 1 cut(s) 116
AvaI CYCGRG 1 cut(s) 31
AvaII GGWCC 2 cut(s) 564, 879
BaeGI GKGCMC 2 cut(s) 372, 739
BaeI ACNNNNGTAYC 2 cut(s) 197, 230
BanI GGYRCC 2 cut(s) 205, 860
BanII GRGCYC 1 cut(s) 32
BbsI GAAGAC 2 cut(s) 159, 216
Bbv12I GWGCWC 4 cut(s) 32, 181, 372, 739
BbvI GCAGC 3 cut(s) 917, 973, 1128
BccI CCATC 4 cut(s) 196, 728, 776, 895
BclI TGATCA 1 cut(s) 51
BcoDI GTCTC 4 cut(s) 78, 145, 247, 618
BfaI CTAG 1 cut(s) 831
BfmI CTRYAG 1 cut(s) 1107
BisI GCNGC 4 cut(s) 774, 906, 987, 1117
BlsI GCNGC 4 cut(s) 775, 907, 988, 1118
BmcAI AGTACT 1 cut(s) 302
Bme18I GGWCC 2 cut(s) 564, 879
BmeT110I CYCGRG 1 cut(s) 31
BmgT120I GGNCC 3 cut(s) 123, 564, 879
BmiI GGNNCC 6 cut(s) 207, 565, 577, 862, 880, 951
BmsI GCATC 5 cut(s) 64, 280, 476, 614, 1040
BpiI GAAGAC 2 cut(s) 159, 216
Bpu10I CCTNAGC 1 cut(s) 684
Bpu14I TTCGAA 1 cut(s) 116
BpuEI CTTGAG 2 cut(s) 165, 1114
BsaBI GATNNNNATC 1 cut(s) 629
BsaI GGTCTC 2 cut(s) 145, 618
BsaJI CCNNGG 3 cut(s) 587, 774, 1035
BsaWI WCCGGW 1 cut(s) 227
BsaXI ACNNNNNCTCC 2 cut(s) 513, 543
Bsc4I CCNNNNNNNGG 3 cut(s) 560, 679, 731
Bse1I ACTGG 2 cut(s) 791, 862
Bse8I GATNNNNATC 1 cut(s) 629
BseAI TCCGGA 1 cut(s) 227
BseDI CCNNGG 3 cut(s) 587, 774, 1035
BseGI GGATG 2 cut(s) 720, 1031
BseJI GATNNNNATC 1 cut(s) 629
BseLI CCNNNNNNNGG 3 cut(s) 560, 679, 731
BseMII CTCAG 5 cut(s) 201, 635, 666, 698, 719
BseNI ACTGG 2 cut(s) 791, 862
BseRI GAGGAG 2 cut(s) 74, 534
BseSI GKGCMC 2 cut(s) 372, 739
BseXI GCAGC 3 cut(s) 917, 973, 1128
Bsh1236I CGCG 1 cut(s) 776
BshFI GGCC 2 cut(s) 124, 773
BshNI GGYRCC 2 cut(s) 205, 860
BsiHKAI GWGCWC 4 cut(s) 32, 181, 372, 739
BsiHKCI CYCGRG 1 cut(s) 31
BsiSI CCGG 1 cut(s) 228
BslFI GGGAC 1 cut(s) 819
BslI CCNNNNNNNGG 3 cut(s) 560, 679, 731
BsmAI GTCTC 4 cut(s) 78, 145, 247, 618
BsmBI CGTCTC 1 cut(s) 247
BsmFI GGGAC 1 cut(s) 819
BsnI GGCC 2 cut(s) 124, 773
Bso31I GGTCTC 2 cut(s) 145, 618
BsoBI CYCGRG 1 cut(s) 31
Bsp119I TTCGAA 1 cut(s) 116
Bsp1286I GDGCHC 4 cut(s) 32, 181, 372, 739
Bsp13I TCCGGA 1 cut(s) 227
Bsp1407I TGTACA 1 cut(s) 376
Bsp143I GATC 2 cut(s) 51, 262
Bsp19I CCATGG 1 cut(s) 587
BspACI CCGC 2 cut(s) 774, 776
BspANI GGCC 2 cut(s) 124, 773
BspCNI CTCAG 5 cut(s) 202, 634, 667, 697, 718
BspEI TCCGGA 1 cut(s) 227
BspFNI CGCG 1 cut(s) 776
BspHI TCATGA 1 cut(s) 661
BspLI GGNNCC 6 cut(s) 207, 565, 577, 862, 880, 951
BspMAI CTGCAG 1 cut(s) 1111
BspPI GGATC 1 cut(s) 257
BspT104I TTCGAA 1 cut(s) 116
BspT107I GGYRCC 2 cut(s) 205, 860
BspTNI GGTCTC 2 cut(s) 145, 618
BsrGI TGTACA 1 cut(s) 376
BsrI ACTGG 2 cut(s) 791, 862
BssECI CCNNGG 3 cut(s) 587, 774, 1035
BssMI GATC 2 cut(s) 51, 262
BssT1I CCWWGG 2 cut(s) 587, 1035
Bst4CI ACNGT 1 cut(s) 383
BstAUI TGTACA 1 cut(s) 376
BstBI TTCGAA 1 cut(s) 116
BstC8I GCNNGC 3 cut(s) 79, 1024, 1153
BstDEI CTNAG 5 cut(s) 210, 621, 675, 684, 705
BstDSI CCRYGG 2 cut(s) 587, 774
BstF5I GGATG 2 cut(s) 720, 1031
BstFNI CGCG 1 cut(s) 776
BstKTI GATC 2 cut(s) 54, 265
BstMAI GTCTC 4 cut(s) 78, 145, 247, 618
BstMBI GATC 2 cut(s) 51, 262
BstMWI GCNNNNNNNGC 4 cut(s) 761, 770, 1028, 1037
BstNSI RCATGY 1 cut(s) 288
BstSFI CTRYAG 1 cut(s) 1107
BstSLI GKGCMC 2 cut(s) 372, 739
BstUI CGCG 1 cut(s) 776
BstV1I GCAGC 3 cut(s) 917, 973, 1128
BstV2I GAAGAC 2 cut(s) 159, 216
BsuRI GGCC 2 cut(s) 124, 773
BtgI CCRYGG 2 cut(s) 587, 774
BtsCI GGATG 2 cut(s) 720, 1031
BtsIMutI CAGTG 3 cut(s) 579, 798, 888
Cac8I GCNNGC 3 cut(s) 79, 1024, 1153
CciI TCATGA 1 cut(s) 661
Cfr13I GGNCC 3 cut(s) 123, 564, 879
Cfr42I CCGCGG 1 cut(s) 777
CseI GACGC 1 cut(s) 263
Csp6I GTAC 4 cut(s) 206, 301, 377, 861
CviAII CATG 6 cut(s) 19, 285, 362, 394, 588, 662
CviQI GTAC 4 cut(s) 206, 301, 377, 861
DdeI CTNAG 5 cut(s) 210, 621, 675, 684, 705
DpnI GATC 2 cut(s) 53, 264
DpnII GATC 2 cut(s) 51, 262
EaeI YGGCCR 1 cut(s) 771
Ecl136II GAGCTC 1 cut(s) 30
Eco130I CCWWGG 2 cut(s) 587, 1035
Eco24I GRGCYC 1 cut(s) 32
Eco31I GGTCTC 2 cut(s) 145, 618
Eco32I GATATC 1 cut(s) 667
Eco47I GGWCC 2 cut(s) 564, 879
Eco53kI GAGCTC 1 cut(s) 30
Eco57I CTGAAG 2 cut(s) 234, 771
Eco88I CYCGRG 1 cut(s) 31
EcoICRI GAGCTC 1 cut(s) 30
EcoRI GAATTC 1 cut(s) 1141
EcoRV GATATC 1 cut(s) 667
EcoT14I CCWWGG 2 cut(s) 587, 1035
EcoT38I GRGCYC 1 cut(s) 32
ErhI CCWWGG 2 cut(s) 587, 1035
Esp3I CGTCTC 1 cut(s) 247
FaeI CATG 6 cut(s) 22, 288, 365, 397, 591, 665
FaqI GGGAC 1 cut(s) 819
FatI CATG 6 cut(s) 18, 284, 361, 393, 587, 661
FbaI TGATCA 1 cut(s) 51
Fnu4HI GCNGC 4 cut(s) 774, 906, 987, 1117
FokI GGATG 2 cut(s) 707, 1018
FriOI GRGCYC 1 cut(s) 32
Fsp4HI GCNGC 4 cut(s) 774, 906, 987, 1117
FspBI CTAG 1 cut(s) 831
GluI GCNGC 4 cut(s) 774, 906, 987, 1117
HaeIII GGCC 2 cut(s) 124, 773
HapII CCGG 1 cut(s) 228
HgaI GACGC 1 cut(s) 263
Hin1II CATG 6 cut(s) 22, 288, 365, 397, 591, 665
HincII GTYRAC 1 cut(s) 99
HindII GTYRAC 1 cut(s) 99
HinfI GANTC 8 cut(s) 38, 86, 193, 212, 457, 796, 931, 1127
HpaII CCGG 1 cut(s) 228
Hpy166II GTNNAC 5 cut(s) 99, 370, 379, 737, 882
Hpy188I TCNGA 6 cut(s) 253, 273, 480, 624, 708, 801
Hpy188III TCNNGA 5 cut(s) 33, 182, 228, 311, 662
Hpy8I GTNNAC 5 cut(s) 99, 370, 379, 737, 882
HpyAV CCTTC 8 cut(s) 136, 179, 226, 627, 673, 735, 828, 1106
HpyCH4III ACNGT 1 cut(s) 383
HpyCH4IV ACGT 1 cut(s) 597
HpyF10VI GCNNNNNNNGC 4 cut(s) 761, 770, 1028, 1037
HpyF3I CTNAG 5 cut(s) 210, 621, 675, 684, 705
HpySE526I ACGT 1 cut(s) 597
Hsp92II CATG 6 cut(s) 22, 288, 365, 397, 591, 665
Kpn2I TCCGGA 1 cut(s) 227
KpnI GGTACC 2 cut(s) 209, 864
Ksp22I TGATCA 1 cut(s) 51
KspI CCGCGG 1 cut(s) 777
Kzo9I GATC 2 cut(s) 51, 262
LmnI GCTCC 1 cut(s) 949
Lsp1109I GCAGC 3 cut(s) 917, 973, 1128
LweI GCATC 5 cut(s) 64, 280, 476, 614, 1040
MaeI CTAG 1 cut(s) 831
MaeII ACGT 1 cut(s) 597
MaeIII GTNAC 2 cut(s) 490, 529
MalI GATC 2 cut(s) 53, 264
MboI GATC 2 cut(s) 51, 262
MboII GAAGA 8 cut(s) 159, 216, 409, 466, 625, 708, 791, 840
MhlI GDGCHC 4 cut(s) 32, 181, 372, 739
MluCI AATT 7 cut(s) 118, 147, 481, 509, 1003, 1075, 1141
MlyI GAGTC 5 cut(s) 47, 80, 187, 221, 925
MmeI TCCRAC 2 cut(s) 553, 950
MnlI CCTC 6 cut(s) 52, 98, 162, 512, 561, 963
MroI TCCGGA 1 cut(s) 227
MroXI GAANNNNTTC 2 cut(s) 302, 1141
MseI TTAA 2 cut(s) 975, 1002
MslI CAYNNNNRTG 1 cut(s) 398
MspA1I CMGCKG 1 cut(s) 776
MspI CCGG 1 cut(s) 228
MvnI CGCG 1 cut(s) 776
MwoI GCNNNNNNNGC 4 cut(s) 761, 770, 1028, 1037
NcoI CCATGG 1 cut(s) 587
NdeII GATC 2 cut(s) 51, 262
NlaIII CATG 6 cut(s) 22, 288, 365, 397, 591, 665
NlaIV GGNNCC 6 cut(s) 207, 565, 577, 862, 880, 951
NspI RCATGY 1 cut(s) 288
NspV TTCGAA 1 cut(s) 116
PaeR7I CTCGAG 1 cut(s) 31
PagI TCATGA 1 cut(s) 661
PciI ACATGT 1 cut(s) 284
PdmI GAANNNNTTC 2 cut(s) 302, 1141
PfeI GAWTC 3 cut(s) 457, 796, 1127
PkrI GCNGC 4 cut(s) 775, 907, 988, 1118
PleI GAGTC 5 cut(s) 46, 80, 187, 220, 925
PpsI GAGTC 5 cut(s) 46, 80, 187, 220, 925
PscI ACATGT 1 cut(s) 284
Psp124BI GAGCTC 1 cut(s) 32
PspN4I GGNNCC 6 cut(s) 207, 565, 577, 862, 880, 951
PspPI GGNCC 3 cut(s) 123, 564, 879
PstI CTGCAG 1 cut(s) 1111
RsaI GTAC 4 cut(s) 207, 302, 378, 862
RsaNI GTAC 4 cut(s) 206, 301, 377, 861
RseI CAYNNNNRTG 1 cut(s) 398
SacI GAGCTC 1 cut(s) 32
SacII CCGCGG 1 cut(s) 777
SaqAI TTAA 2 cut(s) 975, 1002
SatI GCNGC 4 cut(s) 774, 906, 987, 1117
Sau3AI GATC 2 cut(s) 51, 262
Sau96I GGNCC 3 cut(s) 123, 564, 879
ScaI AGTACT 1 cut(s) 302
SchI GAGTC 5 cut(s) 47, 80, 187, 221, 925
SduI GDGCHC 4 cut(s) 32, 181, 372, 739
SfaNI GCATC 5 cut(s) 64, 280, 476, 614, 1040
SfcI CTRYAG 1 cut(s) 1107
Sfr274I CTCGAG 1 cut(s) 31
Sfr303I CCGCGG 1 cut(s) 777
SfuI TTCGAA 1 cut(s) 116
SgrBI CCGCGG 1 cut(s) 777
SinI GGWCC 2 cut(s) 564, 879
SlaI CTCGAG 1 cut(s) 31
SmiMI CAYNNNNRTG 1 cut(s) 398
SmlI CTYRAG 3 cut(s) 31, 180, 1093
SmoI CTYRAG 3 cut(s) 31, 180, 1093
Sse9I AATT 7 cut(s) 118, 147, 481, 509, 1003, 1075, 1141
SsiI CCGC 2 cut(s) 774, 776
SspI AATATT 1 cut(s) 67
SspMI CTAG 1 cut(s) 831
SstI GAGCTC 1 cut(s) 32
StyI CCWWGG 2 cut(s) 587, 1035
TaaI ACNGT 1 cut(s) 383
TaiI ACGT 1 cut(s) 600
TaqI TCGA 3 cut(s) 32, 116, 1042
TasI AATT 7 cut(s) 118, 147, 481, 509, 1003, 1075, 1141
TatI WGTACW 2 cut(s) 300, 376
TauI GCSGC 1 cut(s) 776
TfiI GAWTC 3 cut(s) 457, 796, 1127
Tru1I TTAA 2 cut(s) 975, 1002
Tru9I TTAA 2 cut(s) 975, 1002
TscAI CASTG 3 cut(s) 586, 798, 895
TseI GCWGC 3 cut(s) 905, 986, 1116
TspDTI ATGAA 4 cut(s) 7, 410, 909, 1154
TspRI CASTG 3 cut(s) 586, 798, 895
VneI GTGCAC 2 cut(s) 368, 735
VpaK11BI GGWCC 2 cut(s) 564, 879
XapI RAATTY 3 cut(s) 481, 1075, 1141
XceI RCATGY 1 cut(s) 288
XcmI CCANNNNNNNNNTGG 1 cut(s) 872
XhoI CTCGAG 1 cut(s) 31
XmnI GAANNNNTTC 2 cut(s) 302, 1141
XspI CTAG 1 cut(s) 831
ZrmI AGTACT 1 cut(s) 302
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.