Protein kinase domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G17850 |
| fragaria_vesca | FvH4_5g17560 FvH4_5g17560 FvH4_5g17560 FvH4_5g17560 |
| malus_domestica | MD06G1231400.v1.1 MD06G1231500.v1.1 MD14G1238200.v1.1 |
| prunus_persica | Prupe.5G235400_v2.0.a1 |
| pyrus_communis | pycom06g20530 pycom06g20540 pycom14g19930 pycom14g19940 |
| rosa_chinensis | RchiOBHm_Chr7g0178091 |
| rosa_laevigata | RLG00000005472 |
| rosa_multiflora | Rmu_co8223356.1_g000001 Rmu_sc0000425.1_g000008 |
| rosa_roxburghii | Rroxscaffold_3G00275190 |
| rosa_rugosa | Rorug06G0413400 Rorug06G0413500 Rorug06G0413500 |
| rosa_samantha | Rh7AG012700 Rh7BG012600 Rh7CG012600 Rh7DG012900 |
| rosa_wichuraiana | Rw7G001000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 2248 |
| AatII | GACGTC | 1 cut(s) | 1186 |
| Acc36I | ACCTGC | 2 cut(s) | 1513, 2222 |
| Acc65I | GGTACC | 1 cut(s) | 3412 |
| AccB1I | GGYRCC | 3 cut(s) | 500, 3250, 3412 |
| AccII | CGCG | 3 cut(s) | 347, 682, 2871 |
| AclWI | GGATC | 8 cut(s) | 102, 1644, 1810, 2500, 2739, 2764, 3464, 3866 |
| AcoI | YGGCCR | 2 cut(s) | 342, 3064 |
| AcsI | RAATTY | 8 cut(s) | 907, 974, 1333, 1371, 1586, 1878, 2032, 2932 |
| AcyI | GRCGYC | 5 cut(s) | 237, 359, 501, 1183, 2243 |
| AfaI | GTAC | 8 cut(s) | 1204, 1252, 1299, 2569, 2614, 2918, 3235, 3414 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 503, 1760, 1799, 2368, 2758, 3163, 3555 |
| AflII | CTTAAG | 2 cut(s) | 1208, 3694 |
| AflIII | ACRYGT | 1 cut(s) | 3646 |
| AgeI | ACCGGT | 1 cut(s) | 1300 |
| AjnI | CCWGG | 3 cut(s) | 1253, 2292, 3554 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 3315, 3347, 3385, 3417 |
| Alw21I | GWGCWC | 1 cut(s) | 859 |
| Alw26I | GTCTC | 9 cut(s) | 372, 450, 642, 2066, 2256, 2802, 3110, 3143, 3475 |
| Alw44I | GTGCAC | 1 cut(s) | 855 |
| AlwI | GGATC | 8 cut(s) | 102, 1644, 1810, 2500, 2739, 2764, 3464, 3866 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 785 |
| Ama87I | CYCGRG | 5 cut(s) | 389, 735, 945, 1724, 3408 |
| AoxI | GGCC | 9 cut(s) | 298, 342, 419, 494, 2195, 2271, 3064, 3404, 3751 |
| ApaI | GGGCCC | 1 cut(s) | 2199 |
| ApaLI | GTGCAC | 1 cut(s) | 855 |
| ApoI | RAATTY | 8 cut(s) | 907, 974, 1333, 1371, 1586, 1878, 2032, 2932 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 120, 152 |
| AsiGI | ACCGGT | 1 cut(s) | 1300 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1586 |
| Asp718I | GGTACC | 1 cut(s) | 3412 |
| AspA2I | CCTAGG | 1 cut(s) | 2246 |
| AspLEI | GCGC | 4 cut(s) | 208, 265, 503, 673 |
| AspS9I | GGNCC | 9 cut(s) | 419, 495, 1564, 2085, 2195, 2196, 2638, 2749, 3134 |
| AsuC2I | CCSGG | 3 cut(s) | 498, 1200, 2510 |
| AsuHPI | GGTGA | 2 cut(s) | 518, 3604 |
| AsuNHI | GCTAGC | 1 cut(s) | 3659 |
| AvaI | CYCGRG | 5 cut(s) | 389, 735, 945, 1724, 3408 |
| AvaII | GGWCC | 5 cut(s) | 1564, 2085, 2638, 2749, 3134 |
| AvrII | CCTAGG | 1 cut(s) | 2246 |
| BaeGI | GKGCMC | 3 cut(s) | 859, 2199, 2491 |
| BalI | TGGCCA | 1 cut(s) | 3066 |
| BanI | GGYRCC | 3 cut(s) | 500, 3250, 3412 |
| BanII | GRGCYC | 1 cut(s) | 2199 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 625, 657 |
| BauI | CACGAG | 1 cut(s) | 2961 |
| BbsI | GAAGAC | 3 cut(s) | 1683, 1872, 2433 |
| Bbv12I | GWGCWC | 1 cut(s) | 859 |
| BbvCI | CCTCAGC | 2 cut(s) | 706, 1290 |
| BccI | CCATC | 7 cut(s) | 53, 1600, 1960, 2884, 3056, 3586, 3883 |
| BceAI | ACGGC | 3 cut(s) | 119, 161, 661 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1715, 1749, 2440, 2474 |
| BciT130I | CCWGG | 3 cut(s) | 1255, 2294, 3556 |
| BciVI | GTATCC | 2 cut(s) | 1387, 3538 |
| BclI | TGATCA | 4 cut(s) | 1702, 1903, 2206, 3451 |
| BcnI | CCSGG | 3 cut(s) | 498, 1200, 2510 |
| BcoDI | GTCTC | 9 cut(s) | 372, 450, 642, 2066, 2256, 2802, 3110, 3143, 3475 |
| BfmI | CTRYAG | 4 cut(s) | 1359, 2229, 2649, 3288 |
| BfoI | RGCGCY | 1 cut(s) | 504 |
| BfrI | CTTAAG | 2 cut(s) | 1208, 3694 |
| BfuAI | ACCTGC | 2 cut(s) | 1513, 2222 |
| BfuI | GTATCC | 2 cut(s) | 1387, 3538 |
| BglII | AGATCT | 1 cut(s) | 3442 |
| BlnI | CCTAGG | 1 cut(s) | 2246 |
| BlpI | GCTNAGC | 1 cut(s) | 292 |
| Bme1390I | CCNGG | 6 cut(s) | 498, 1200, 1255, 2294, 2510, 3556 |
| Bme18I | GGWCC | 5 cut(s) | 1564, 2085, 2638, 2749, 3134 |
| BmeT110I | CYCGRG | 5 cut(s) | 389, 735, 945, 1724, 3408 |
| BmgT120I | GGNCC | 9 cut(s) | 419, 495, 1564, 2085, 2195, 2196, 2638, 2749, 3134 |
| BmrFI | CCNGG | 6 cut(s) | 498, 1200, 1255, 2294, 2510, 3556 |
| BmrI | ACTGGG | 1 cut(s) | 3550 |
| BmtI | GCTAGC | 1 cut(s) | 3663 |
| BmuI | ACTGGG | 1 cut(s) | 3550 |
| BpiI | GAAGAC | 3 cut(s) | 1683, 1872, 2433 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3758, 3790 |
| BpmI | CTGGAG | 3 cut(s) | 768, 1152, 1581 |
| Bpu10I | CCTNAGC | 2 cut(s) | 706, 1290 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 292 |
| BpuEI | CTTGAG | 2 cut(s) | 775, 2452 |
| BpuMI | CCSGG | 3 cut(s) | 498, 1200, 2510 |
| Bsa29I | ATCGAT | 1 cut(s) | 1897 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1062, 1701 |
| BsaHI | GRCGYC | 5 cut(s) | 237, 359, 501, 1183, 2243 |
| BsaI | GGTCTC | 4 cut(s) | 642, 2066, 2256, 3110 |
| BsaJI | CCNNGG | 9 cut(s) | 240, 345, 736, 860, 944, 1737, 2246, 3401, 3407 |
| BsaWI | WCCGGW | 2 cut(s) | 1300, 3253 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 313, 343, 344, 374, 3248, 3278 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 503, 1760, 1799, 2368, 2758, 3163, 3555 |
| Bse118I | RCCGGY | 3 cut(s) | 355, 503, 1300 |
| Bse1I | ACTGG | 8 cut(s) | 634, 1076, 1598, 2274, 3545, 3603, 3615, 3678 |
| Bse3DI | GCAATG | 2 cut(s) | 1125, 3600 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1062, 1701 |
| BseBI | CCWGG | 3 cut(s) | 1255, 2294, 3556 |
| BseCI | ATCGAT | 1 cut(s) | 1897 |
| BseDI | CCNNGG | 9 cut(s) | 240, 345, 736, 860, 944, 1737, 2246, 3401, 3407 |
| BseJI | GATNNNNATC | 2 cut(s) | 1062, 1701 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 503, 1760, 1799, 2368, 2758, 3163, 3555 |
| BseMI | GCAATG | 2 cut(s) | 1125, 3600 |
| BseNI | ACTGG | 8 cut(s) | 634, 1076, 1598, 2274, 3545, 3603, 3615, 3678 |
| BseRI | GAGGAG | 5 cut(s) | 16, 34, 2580, 2922, 3510 |
| BseSI | GKGCMC | 3 cut(s) | 859, 2199, 2491 |
| BseX3I | CGGCCG | 1 cut(s) | 342 |
| BseYI | CCCAGC | 3 cut(s) | 591, 716, 3822 |
| BsgI | GTGCAG | 1 cut(s) | 537 |
| Bsh1236I | CGCG | 3 cut(s) | 347, 682, 2871 |
| Bsh1285I | CGRYCG | 3 cut(s) | 83, 345, 3224 |
| BshFI | GGCC | 9 cut(s) | 300, 344, 421, 496, 2197, 2273, 3066, 3406, 3753 |
| BshNI | GGYRCC | 3 cut(s) | 500, 3250, 3412 |
| BshTI | ACCGGT | 1 cut(s) | 1300 |
| BshVI | ATCGAT | 1 cut(s) | 1897 |
| BsiEI | CGRYCG | 3 cut(s) | 83, 345, 3224 |
| BsiHKAI | GWGCWC | 1 cut(s) | 859 |
| BsiHKCI | CYCGRG | 5 cut(s) | 389, 735, 945, 1724, 3408 |
| BsiSI | CCGG | 7 cut(s) | 356, 498, 504, 1199, 1301, 2509, 3254 |
| BslFI | GGGAC | 3 cut(s) | 235, 1577, 2071 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 503, 1760, 1799, 2368, 2758, 3163, 3555 |
| BsmAI | GTCTC | 9 cut(s) | 372, 450, 642, 2066, 2256, 2802, 3110, 3143, 3475 |
| BsmBI | CGTCTC | 1 cut(s) | 3143 |
| BsmFI | GGGAC | 3 cut(s) | 235, 1577, 2071 |
| BsmI | GAATGC | 2 cut(s) | 1233, 3336 |
| BsnI | GGCC | 9 cut(s) | 300, 344, 421, 496, 2197, 2273, 3066, 3406, 3753 |
| Bso31I | GGTCTC | 4 cut(s) | 642, 2066, 2256, 3110 |
| BsoBI | CYCGRG | 5 cut(s) | 389, 735, 945, 1724, 3408 |
| Bsp120I | GGGCCC | 1 cut(s) | 2195 |
| Bsp1286I | GDGCHC | 3 cut(s) | 859, 2199, 2491 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 292 |
| BspANI | GGCC | 9 cut(s) | 300, 344, 421, 496, 2197, 2273, 3066, 3406, 3753 |
| BspDI | ATCGAT | 1 cut(s) | 1897 |
| BspFNI | CGCG | 3 cut(s) | 347, 682, 2871 |
| BspHI | TCATGA | 2 cut(s) | 1747, 3724 |
| BspMAI | CTGCAG | 3 cut(s) | 1363, 2233, 3292 |
| BspMI | ACCTGC | 2 cut(s) | 1513, 2222 |
| BspOI | GCTAGC | 1 cut(s) | 3663 |
| BspPI | GGATC | 8 cut(s) | 102, 1644, 1810, 2500, 2739, 2764, 3464, 3866 |
| BspT107I | GGYRCC | 3 cut(s) | 500, 3250, 3412 |
| BspTI | CTTAAG | 2 cut(s) | 1208, 3694 |
| BspTNI | GGTCTC | 4 cut(s) | 642, 2066, 2256, 3110 |
| BsrDI | GCAATG | 2 cut(s) | 1125, 3600 |
| BsrFI | RCCGGY | 3 cut(s) | 355, 503, 1300 |
| BsrI | ACTGG | 8 cut(s) | 634, 1076, 1598, 2274, 3545, 3603, 3615, 3678 |
| BssAI | RCCGGY | 3 cut(s) | 355, 503, 1300 |
| BssECI | CCNNGG | 9 cut(s) | 240, 345, 736, 860, 944, 1737, 2246, 3401, 3407 |
| BssNI | GRCGYC | 5 cut(s) | 237, 359, 501, 1183, 2243 |
| BssSI | CACGAG | 1 cut(s) | 2961 |
| BssT1I | CCWWGG | 5 cut(s) | 240, 860, 1737, 2246, 3401 |
| Bst2BI | CACGAG | 1 cut(s) | 2961 |
| Bst2UI | CCWGG | 3 cut(s) | 1255, 2294, 3556 |
| Bst6I | CTCTTC | 3 cut(s) | 860, 1475, 1532 |
| BstACI | GRCGYC | 5 cut(s) | 237, 359, 501, 1183, 2243 |
| BstAFI | CTTAAG | 2 cut(s) | 1208, 3694 |
| BstDSI | CCRYGG | 1 cut(s) | 345 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2756 |
| BstFNI | CGCG | 3 cut(s) | 347, 682, 2871 |
| BstH2I | RGCGCY | 1 cut(s) | 504 |
| BstHHI | GCGC | 4 cut(s) | 208, 265, 503, 673 |
| BstMAI | GTCTC | 9 cut(s) | 372, 450, 642, 2066, 2256, 2802, 3110, 3143, 3475 |
| BstMCI | CGRYCG | 3 cut(s) | 83, 345, 3224 |
| BstNI | CCWGG | 3 cut(s) | 1255, 2294, 3556 |
| BstNSI | RCATGY | 3 cut(s) | 667, 3281, 3650 |
| BstSCI | CCNGG | 6 cut(s) | 496, 1198, 1253, 2292, 2508, 3554 |
| BstSFI | CTRYAG | 4 cut(s) | 1359, 2229, 2649, 3288 |
| BstSLI | GKGCMC | 3 cut(s) | 859, 2199, 2491 |
| BstUI | CGCG | 3 cut(s) | 347, 682, 2871 |
| BstV2I | GAAGAC | 3 cut(s) | 1683, 1872, 2433 |
| BstX2I | RGATCY | 5 cut(s) | 107, 1802, 2731, 3442, 3469 |
| BstYI | RGATCY | 5 cut(s) | 107, 1802, 2731, 3442, 3469 |
| BstZI | CGGCCG | 1 cut(s) | 342 |
| Bsu15I | ATCGAT | 1 cut(s) | 1897 |
| BsuI | GTATCC | 2 cut(s) | 1387, 3538 |
| BsuRI | GGCC | 9 cut(s) | 300, 344, 421, 496, 2197, 2273, 3066, 3406, 3753 |
| BsuTUI | ATCGAT | 1 cut(s) | 1897 |
| BtgI | CCRYGG | 1 cut(s) | 345 |
| BtgZI | GCGATG | 2 cut(s) | 3864, 3869 |
| BtsI | GCAGTG | 1 cut(s) | 3895 |
| BtsIMutI | CAGTG | 6 cut(s) | 1154, 2083, 3117, 3595, 3685, 3895 |
| BveI | ACCTGC | 2 cut(s) | 1513, 2222 |
| CaiI | CAGNNNCTG | 1 cut(s) | 785 |
| CciI | TCATGA | 2 cut(s) | 1747, 3724 |
| CciNI | GCGGCCGC | 1 cut(s) | 342 |
| CfoI | GCGC | 4 cut(s) | 208, 265, 503, 673 |
| Cfr10I | RCCGGY | 3 cut(s) | 355, 503, 1300 |
| Cfr13I | GGNCC | 9 cut(s) | 419, 495, 1564, 2085, 2195, 2196, 2638, 2749, 3134 |
| Cfr42I | CCGCGG | 1 cut(s) | 348 |
| ClaI | ATCGAT | 1 cut(s) | 1897 |
| CseI | GACGC | 4 cut(s) | 245, 348, 1919, 2251 |
| CsiI | ACCWGGT | 1 cut(s) | 1253 |
| Csp6I | GTAC | 8 cut(s) | 1203, 1251, 1298, 2568, 2613, 2917, 3234, 3413 |
| CspAI | ACCGGT | 1 cut(s) | 1300 |
| CviQI | GTAC | 8 cut(s) | 1203, 1251, 1298, 2568, 2613, 2917, 3234, 3413 |
| DinI | GGCGCC | 1 cut(s) | 502 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2248 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2248 |
| EaeI | YGGCCR | 2 cut(s) | 342, 3064 |
| EagI | CGGCCG | 1 cut(s) | 342 |
| Eam1104I | CTCTTC | 3 cut(s) | 860, 1475, 1532 |
| EarI | CTCTTC | 3 cut(s) | 860, 1475, 1532 |
| EciI | GGCGGA | 2 cut(s) | 121, 160 |
| EclXI | CGGCCG | 1 cut(s) | 342 |
| Eco130I | CCWWGG | 5 cut(s) | 240, 860, 1737, 2246, 3401 |
| Eco147I | AGGCCT | 1 cut(s) | 3753 |
| Eco24I | GRGCYC | 1 cut(s) | 2199 |
| Eco31I | GGTCTC | 4 cut(s) | 642, 2066, 2256, 3110 |
| Eco32I | GATATC | 4 cut(s) | 729, 1790, 2820, 3535 |
| Eco47I | GGWCC | 5 cut(s) | 1564, 2085, 2638, 2749, 3134 |
| Eco52I | CGGCCG | 1 cut(s) | 342 |
| Eco88I | CYCGRG | 5 cut(s) | 389, 735, 945, 1724, 3408 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2756 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2749 |
| EcoRI | GAATTC | 2 cut(s) | 1333, 1371 |
| EcoRII | CCWGG | 3 cut(s) | 1253, 2292, 3554 |
| EcoRV | GATATC | 4 cut(s) | 729, 1790, 2820, 3535 |
| EcoT14I | CCWWGG | 5 cut(s) | 240, 860, 1737, 2246, 3401 |
| EcoT38I | GRGCYC | 1 cut(s) | 2199 |
| EgeI | GGCGCC | 1 cut(s) | 502 |
| EheI | GGCGCC | 1 cut(s) | 502 |
| ErhI | CCWWGG | 5 cut(s) | 240, 860, 1737, 2246, 3401 |
| Esp3I | CGTCTC | 1 cut(s) | 3143 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 275, 307, 2313, 2345, 2970, 3002 |
| FaqI | GGGAC | 3 cut(s) | 235, 1577, 2071 |
| FauNDI | CATATG | 1 cut(s) | 790 |
| FbaI | TGATCA | 4 cut(s) | 1702, 1903, 2206, 3451 |
| FriOI | GRGCYC | 1 cut(s) | 2199 |
| GlaI | GCGC | 4 cut(s) | 207, 264, 502, 672 |
| GsaI | CCCAGC | 3 cut(s) | 595, 720, 3826 |
| GsuI | CTGGAG | 3 cut(s) | 768, 1152, 1581 |
| HaeII | RGCGCY | 1 cut(s) | 504 |
| HaeIII | GGCC | 9 cut(s) | 300, 344, 421, 496, 2197, 2273, 3066, 3406, 3753 |
| HapII | CCGG | 7 cut(s) | 356, 498, 504, 1199, 1301, 2509, 3254 |
| HgaI | GACGC | 4 cut(s) | 245, 348, 1919, 2251 |
| HhaI | GCGC | 4 cut(s) | 208, 265, 503, 673 |
| Hin1I | GRCGYC | 5 cut(s) | 237, 359, 501, 1183, 2243 |
| Hin6I | GCGC | 4 cut(s) | 206, 263, 501, 671 |
| HinP1I | GCGC | 4 cut(s) | 206, 263, 501, 671 |
| HincII | GTYRAC | 4 cut(s) | 257, 627, 3078, 3739 |
| HindII | GTYRAC | 4 cut(s) | 257, 627, 3078, 3739 |
| HindIII | AAGCTT | 1 cut(s) | 1770 |
| HpaII | CCGG | 7 cut(s) | 356, 498, 504, 1199, 1301, 2509, 3254 |
| HphI | GGTGA | 2 cut(s) | 518, 3604 |
| Hpy166II | GTNNAC | 8 cut(s) | 257, 627, 857, 1000, 1205, 3078, 3236, 3739 |
| Hpy8I | GTNNAC | 8 cut(s) | 257, 627, 857, 1000, 1205, 3078, 3236, 3739 |
| Hpy99I | CGWCG | 8 cut(s) | 319, 322, 325, 328, 364, 388, 682, 2060 |
| HpyCH4IV | ACGT | 3 cut(s) | 1183, 1296, 3152 |
| HpySE526I | ACGT | 3 cut(s) | 1183, 1296, 3152 |
| Hsp92I | GRCGYC | 5 cut(s) | 237, 359, 501, 1183, 2243 |
| HspAI | GCGC | 4 cut(s) | 206, 263, 501, 671 |
| KasI | GGCGCC | 1 cut(s) | 500 |
| KpnI | GGTACC | 1 cut(s) | 3416 |
| KroI | GCCGGC | 1 cut(s) | 355 |
| KroNI | GCCGGC | 1 cut(s) | 357 |
| Ksp22I | TGATCA | 4 cut(s) | 1702, 1903, 2206, 3451 |
| KspI | CCGCGG | 1 cut(s) | 348 |
| MabI | ACCWGGT | 1 cut(s) | 1253 |
| MaeII | ACGT | 3 cut(s) | 1183, 1296, 3152 |
| MaeIII | GTNAC | 7 cut(s) | 506, 577, 1411, 1495, 2041, 3605, 3620 |
| MfeI | CAATTG | 1 cut(s) | 1887 |
| MflI | RGATCY | 5 cut(s) | 107, 1802, 2731, 3442, 3469 |
| MhlI | GDGCHC | 3 cut(s) | 859, 2199, 2491 |
| MlsI | TGGCCA | 1 cut(s) | 3066 |
| MluNI | TGGCCA | 1 cut(s) | 3066 |
| Mly113I | GGCGCC | 1 cut(s) | 501 |
| MlyI | GAGTC | 9 cut(s) | 35, 140, 322, 556, 759, 821, 1979, 3436, 3776 |
| MmeI | TCCRAC | 5 cut(s) | 72, 117, 1582, 1874, 2079 |
| Mox20I | TGGCCA | 1 cut(s) | 3066 |
| MroNI | GCCGGC | 1 cut(s) | 355 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1586 |
| MscI | TGGCCA | 1 cut(s) | 3066 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1226, 3888 |
| Msp20I | TGGCCA | 1 cut(s) | 3066 |
| MspA1I | CMGCKG | 4 cut(s) | 347, 424, 710, 3140 |
| MspCI | CTTAAG | 2 cut(s) | 1208, 3694 |
| MspI | CCGG | 7 cut(s) | 356, 498, 504, 1199, 1301, 2509, 3254 |
| MspR9I | CCNGG | 6 cut(s) | 498, 1200, 1255, 2294, 2510, 3556 |
| MunI | CAATTG | 1 cut(s) | 1887 |
| Mva1269I | GAATGC | 2 cut(s) | 1233, 3336 |
| MvaI | CCWGG | 3 cut(s) | 1255, 2294, 3556 |
| MvnI | CGCG | 3 cut(s) | 347, 682, 2871 |
| NaeI | GCCGGC | 1 cut(s) | 357 |
| NarI | GGCGCC | 1 cut(s) | 501 |
| NciI | CCSGG | 3 cut(s) | 498, 1200, 2510 |
| NdeI | CATATG | 1 cut(s) | 790 |
| NgoMIV | GCCGGC | 1 cut(s) | 355 |
| NheI | GCTAGC | 1 cut(s) | 3659 |
| NmeAIII | GCCGAG | 2 cut(s) | 66, 446 |
| NmuCI | GTSAC | 3 cut(s) | 506, 577, 2041 |
| NotI | GCGGCCGC | 1 cut(s) | 342 |
| NspI | RCATGY | 3 cut(s) | 667, 3281, 3650 |
| PagI | TCATGA | 2 cut(s) | 1747, 3724 |
| PceI | AGGCCT | 1 cut(s) | 3753 |
| PciI | ACATGT | 1 cut(s) | 3646 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 314, 320, 323, 329 |
| PctI | GAATGC | 2 cut(s) | 1233, 3336 |
| PdiI | GCCGGC | 1 cut(s) | 357 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1586 |
| PfoI | TCCNGGA | 1 cut(s) | 2508 |
| PinAI | ACCGGT | 1 cut(s) | 1300 |
| Ple19I | CGATCG | 1 cut(s) | 83 |
| PleI | GAGTC | 9 cut(s) | 35, 140, 322, 555, 758, 820, 1978, 3435, 3775 |
| PluTI | GGCGCC | 1 cut(s) | 504 |
| PpsI | GAGTC | 9 cut(s) | 35, 140, 322, 555, 758, 820, 1978, 3435, 3775 |
| PpuMI | RGGWCCY | 1 cut(s) | 2749 |
| PscI | ACATGT | 1 cut(s) | 3646 |
| Psp5II | RGGWCCY | 1 cut(s) | 2749 |
| Psp6I | CCWGG | 3 cut(s) | 1253, 2292, 3554 |
| PspFI | CCCAGC | 3 cut(s) | 591, 716, 3822 |
| PspGI | CCWGG | 3 cut(s) | 1253, 2292, 3554 |
| PspOMI | GGGCCC | 1 cut(s) | 2195 |
| PspPI | GGNCC | 9 cut(s) | 419, 495, 1564, 2085, 2195, 2196, 2638, 2749, 3134 |
| PspPPI | RGGWCCY | 1 cut(s) | 2749 |
| PstI | CTGCAG | 3 cut(s) | 1363, 2233, 3292 |
| PstNI | CAGNNNCTG | 1 cut(s) | 785 |
| PsuI | RGATCY | 5 cut(s) | 107, 1802, 2731, 3442, 3469 |
| PvuI | CGATCG | 1 cut(s) | 83 |
| PvuII | CAGCTG | 1 cut(s) | 710 |
| RsaI | GTAC | 8 cut(s) | 1204, 1252, 1299, 2569, 2614, 2918, 3235, 3414 |
| RsaNI | GTAC | 8 cut(s) | 1203, 1251, 1298, 2568, 2613, 2917, 3234, 3413 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1226, 3888 |
| SacII | CCGCGG | 1 cut(s) | 348 |
| Sau96I | GGNCC | 9 cut(s) | 419, 495, 1564, 2085, 2195, 2196, 2638, 2749, 3134 |
| SchI | GAGTC | 9 cut(s) | 35, 140, 322, 556, 759, 821, 1979, 3436, 3776 |
| ScrFI | CCNGG | 6 cut(s) | 498, 1200, 1255, 2294, 2510, 3556 |
| SduI | GDGCHC | 3 cut(s) | 859, 2199, 2491 |
| SexAI | ACCWGGT | 1 cut(s) | 1253 |
| SfcI | CTRYAG | 4 cut(s) | 1359, 2229, 2649, 3288 |
| SfoI | GGCGCC | 1 cut(s) | 502 |
| Sfr303I | CCGCGG | 1 cut(s) | 348 |
| SgrAI | CRCCGGYG | 1 cut(s) | 503 |
| SgrBI | CCGCGG | 1 cut(s) | 348 |
| SinI | GGWCC | 5 cut(s) | 1564, 2085, 2638, 2749, 3134 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1226, 3888 |
| SmlI | CTYRAG | 4 cut(s) | 754, 1208, 2431, 3694 |
| SmoI | CTYRAG | 4 cut(s) | 754, 1208, 2431, 3694 |
| SseBI | AGGCCT | 1 cut(s) | 3753 |
| SspDI | GGCGCC | 1 cut(s) | 500 |
| SspI | AATATT | 2 cut(s) | 954, 2999 |
| StuI | AGGCCT | 1 cut(s) | 3753 |
| StyD4I | CCNGG | 6 cut(s) | 496, 1198, 1253, 2292, 2508, 3554 |
| StyI | CCWWGG | 5 cut(s) | 240, 860, 1737, 2246, 3401 |
| TaiI | ACGT | 3 cut(s) | 1186, 1299, 3155 |
| TaqI | TCGA | 7 cut(s) | 308, 922, 1108, 1535, 1897, 2036, 2460 |
| TaqII | GACCGA | 2 cut(s) | 1581, 2655 |
| TatI | WGTACW | 1 cut(s) | 2916 |
| TscAI | CASTG | 6 cut(s) | 1154, 2083, 3124, 3595, 3685, 3895 |
| TseFI | GTSAC | 3 cut(s) | 506, 577, 2041 |
| Tsp45I | GTSAC | 3 cut(s) | 506, 577, 2041 |
| TspGWI | ACGGA | 2 cut(s) | 1327, 2762 |
| TspRI | CASTG | 6 cut(s) | 1154, 2083, 3124, 3595, 3685, 3895 |
| Vha464I | CTTAAG | 2 cut(s) | 1208, 3694 |
| VneI | GTGCAC | 1 cut(s) | 855 |
| VpaK11BI | GGWCC | 5 cut(s) | 1564, 2085, 2638, 2749, 3134 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2756 |
| XapI | RAATTY | 8 cut(s) | 907, 974, 1333, 1371, 1586, 1878, 2032, 2932 |
| XceI | RCATGY | 3 cut(s) | 667, 3281, 3650 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1277 |
| XmaJI | CCTAGG | 1 cut(s) | 2246 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1586 |
| ZraI | GACGTC | 1 cut(s) | 1184 |