Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000425.1

Orthogroup ID

OG0006892

Physical Location & Seq

Genomic Coordinates Reverse (-)

53924 .. 59664

Gene Structure 5741 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000425.1_g000008.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2583 bp

atgaagtcaagagtttatagtggaaactggaaaggaatatgtgtgttggataaaagaattcctccaagtttggtaaaggatacaaaaagttcaagtgttacaaagacatctaaagcagcttcagctaggaaatcttacagtcaggagcagcatagcttggattggaagagagatcatgcggttacacaacctgcaatcccccctcctgccgatctcccctcgaagagtttggaatctcctgctagtagggaccgaattacgtcatggaagaaattcccatctccagtcggaaaaagcatgaaagaagtttctaaagtaaagaatcagaaggatgttaaggctgagcagttgaaggcttcagaacacaggagagtgtcttctgatattgatcagactactgtgaaacctcccgagccttctgccaaggattctcatgaacccaagcatggacacaaagcttcttgggggtggggatatcctcctagtggatctgatgacacttctataatttgtcgcatttgtgaggatgaggttccaacttcaaatgtggaagaccattcaagaatttgtgcaattgctgatcgatgtgatcagaaaggtctaagtgtcaatgagcgtcttgtcagaatatccgaaactcttgaaaagatgatggagtccttcactcaaaaggacatccagcatggcataggaagtccagatgttgcaaaaatatcaaattcgagtgtgactgaagaatccgacggtctctctccaaaactcagtgattggtcccatagaggctctgaggaaatgcttgattgttttcctgaagctgataattcatctttcatggatgacctgaagggtttgccttccatgtcatgtagaactcgttttgggcccaagtctgatcaaggaatgacaacatcatctgcaggtagcatgacgccgaggtctcctttattgacaccaaaggccagtcagattgacttgctcctggcaggcaaggcttctttttctgagcaagatgatcttcctcagatgaatgaactttctgatattgcccgttgcttggcaaatacacctttggaggatgatcgttccattccatatttactatcttgtcttgaagacttgagagttgttattgaacgcagaaagttcgatgcacttacggtggaaacatttggggcacgcattgagaagctgatccgggagaagtatttgcagctttgtgagttagtggaagatgaaaaggttgatatatcaagtaccataattgatgaagatgctcctcttgatgatgatgtggttcgtacaagcccgatacattttaacaaggaccgaacatctatagacgactttgaaattattaaaccaataagtcgtggggcatttggacgagttttcctagctaaaaagagaacaacaggggatctttttgcaattaaggtccttaaaaaggcagatatgatccgtaaaaatgctgttgaaagtatattagcagaacgagacatcttgatatcagtccgcaatccttttgtggttcggttcttctattcttttacttgccgcgaaaacttgtatcttgtgatggagtatctaaatggaggagatttgtactcgttgttgagaaatttaggctgcttagatgaggatgttgctcgtgtatatatagctgaagtggtgcttgcattggaatatttacattcactttatgtggttcatcgtgatttgaagcctgacaatttgttaattgctcacgatggccatgttaagttgacagactttgggctttcaaaggttggtctcattaacagcactgatgatttatctggtccagcggttagcgagacgtccctacttggggaagatgaagccgaattatctctgtctgagcatcagcgagaaaggcgaaagaaacggtcggctgtgggtacacctgactatttggcaccggagatactgttgggaacaggacatgctgcaactgcagattggtggtctgttggggtcattttgtttgaattgattgttggcattccacccttcaatgcagaacatcctcagacaatttttgataatatactcaaccgaaatataccttggcctcgggtacctgaagaattgagtcctgaagccgcagatctgattgatcagttattgacagaagatcctactcagagacttggagccagaggagcatcagaggtaaagcagcatccattctttaaggatatcaactgggatacccttgccaggcagaaggctgcgtttgttccatcttcagacagtgcaatggacaccagttacttcaccagtcgttactcatggaatccttcagatgaacatgtttatccagctagcgatcttgacgattccagtgatgctgatagcttaagtggcagcagcagtttaagcaaccggcatgatgaagttgttgacgagtgtggaggccttgcagagtttgagtctggctcgtctatcaattactctttcagtaatttctcatttaagaatctctcccagcttgcatcaatcaactatgatctgctttcaaagggttttaaggatgatccatcatcgcatcgcagtgcatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0023052 GO:0035556 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

860

Amino Acids

95.69

Weight (kDa)

5.23

Isoelectric Point (pI)

41.87

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006892)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G17850
fragaria_vesca	FvH4_5g17560 FvH4_5g17560 FvH4_5g17560 FvH4_5g17560
malus_domestica	MD06G1231400.v1.1 MD06G1231500.v1.1 MD14G1238200.v1.1
prunus_persica	Prupe.5G235400_v2.0.a1
pyrus_communis	pycom06g20530 pycom06g20540 pycom14g19930 pycom14g19940
rosa_chinensis	RchiOBHm_Chr7g0178091
rosa_laevigata	RLG00000005472
rosa_multiflora	Rmu_co8223356.1_g000001 Rmu_sc0000425.1_g000008
rosa_roxburghii	Rroxscaffold_3G00275190
rosa_rugosa	Rorug06G0413400 Rorug06G0413500 Rorug06G0413500
rosa_samantha	Rh7AG012700 Rh7BG012600 Rh7CG012600 Rh7DG012900
rosa_wichuraiana	Rw7G001000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	934
AatII	GACGTC	1 cut(s)	1841
Acc36I	ACCTGC	2 cut(s)	199, 908
Acc65I	GGTACC	1 cut(s)	2098
AccB1I	GGYRCC	2 cut(s)	1936, 2098
AccII	CGCG	1 cut(s)	1557
AciI	CCGC	5 cut(s)	179, 1513, 1555, 1826, 2124
AclWI	GGATC	6 cut(s)	496, 1186, 1425, 1450, 2150, 2552
AcoI	YGGCCR	1 cut(s)	1750
AcsI	RAATTY	5 cut(s)	57, 272, 564, 718, 1618
AcyI	GRCGYC	2 cut(s)	929, 1838
AfaI	GTAC	5 cut(s)	1255, 1300, 1604, 1921, 2100
AfiI	CCNNNNNNNGG	7 cut(s)	446, 485, 1054, 1444, 1848, 1849, 2241
AflII	CTTAAG	1 cut(s)	2380
AflIII	ACRYGT	1 cut(s)	2332
AjnI	CCWGG	2 cut(s)	978, 2240
AjuI	GAANNNNNNNTTGG	4 cut(s)	2001, 2033, 2071, 2103
Alw26I	GTCTC	6 cut(s)	752, 942, 1488, 1796, 1829, 2161
AlwI	GGATC	6 cut(s)	496, 1186, 1425, 1450, 2150, 2552
Ama87I	CYCGRG	2 cut(s)	410, 2094
AoxI	GGCC	5 cut(s)	881, 957, 1750, 2090, 2437
ApaI	GGGCCC	1 cut(s)	885
ApeKI	GCWGC	9 cut(s)	116, 148, 1210, 1626, 1967, 2200, 2252, 2388, 2391
ApoI	RAATTY	5 cut(s)	57, 272, 564, 718, 1618
Asp700I	GAANNNNTTC	1 cut(s)	272
Asp718I	GGTACC	1 cut(s)	2098
AspS9I	GGNCC	7 cut(s)	250, 771, 881, 882, 1324, 1435, 1820
AsuC2I	CCSGG	1 cut(s)	1196
AsuHPI	GGTGA	1 cut(s)	2290
AsuNHI	GCTAGC	1 cut(s)	2345
AvaI	CYCGRG	2 cut(s)	410, 2094
AvaII	GGWCC	5 cut(s)	250, 771, 1324, 1435, 1820
BaeGI	GKGCMC	2 cut(s)	885, 1177
BalI	TGGCCA	1 cut(s)	1752
BanI	GGYRCC	2 cut(s)	1936, 2098
BanII	GRGCYC	1 cut(s)	885
BauI	CACGAG	1 cut(s)	1647
BbsI	GAAGAC	3 cut(s)	369, 558, 1119
BbvI	GCAGC	9 cut(s)	128, 160, 1222, 1613, 1954, 2212, 2239, 2400, 2403
BccI	CCATC	6 cut(s)	286, 646, 1570, 1742, 2272, 2569
BcgI	CGANNNNNNTGC	4 cut(s)	401, 435, 1126, 1160
BciT130I	CCWGG	2 cut(s)	980, 2242
BciVI	GTATCC	2 cut(s)	73, 2224
BclI	TGATCA	4 cut(s)	388, 589, 892, 2137
BcnI	CCSGG	1 cut(s)	1196
BcoDI	GTCTC	6 cut(s)	752, 942, 1488, 1796, 1829, 2161
BfaI	CTAG	5 cut(s)	126, 243, 483, 1394, 2346
BfmI	CTRYAG	3 cut(s)	915, 1335, 1974
BfrI	CTTAAG	1 cut(s)	2380
BfuAI	ACCTGC	2 cut(s)	199, 908
BfuI	GTATCC	2 cut(s)	73, 2224
BglII	AGATCT	1 cut(s)	2128
BlpI	GCTNAGC	1 cut(s)	342
Bme1390I	CCNGG	3 cut(s)	980, 1196, 2242
Bme18I	GGWCC	5 cut(s)	250, 771, 1324, 1435, 1820
BmeT110I	CYCGRG	2 cut(s)	410, 2094
BmgT120I	GGNCC	7 cut(s)	250, 771, 881, 882, 1324, 1435, 1820
BmiI	GGNNCC	7 cut(s)	251, 534, 773, 883, 1938, 2100, 2176
BmrFI	CCNGG	3 cut(s)	980, 1196, 2242
BmrI	ACTGGG	1 cut(s)	2236
BmsI	GCATC	8 cut(s)	1138, 1261, 1891, 2195, 2212, 2359, 2525, 2578
BmtI	GCTAGC	1 cut(s)	2349
BmuI	ACTGGG	1 cut(s)	2236
BpiI	GAAGAC	3 cut(s)	369, 558, 1119
BplI	GAGNNNNNCTC	2 cut(s)	2444, 2476
BpmI	CTGGAG	1 cut(s)	267
Bpu1102I	GCTNAGC	1 cut(s)	342
BpuEI	CTTGAG	1 cut(s)	1138
BpuMI	CCSGG	1 cut(s)	1196
Bsa29I	ATCGAT	1 cut(s)	583
BsaBI	GATNNNNATC	1 cut(s)	387
BsaHI	GRCGYC	2 cut(s)	929, 1838
BsaI	GGTCTC	3 cut(s)	752, 942, 1796
BsaJI	CCNNGG	4 cut(s)	423, 932, 2087, 2093
BsaWI	WCCGGW	1 cut(s)	1939
BsaXI	ACNNNNNCTCC	2 cut(s)	1934, 1964
Bsc4I	CCNNNNNNNGG	7 cut(s)	446, 485, 1054, 1444, 1848, 1849, 2241
Bse118I	RCCGGY	1 cut(s)	2406
Bse1I	ACTGG	7 cut(s)	32, 284, 960, 2231, 2289, 2301, 2364
Bse3DI	GCAATG	1 cut(s)	2286
Bse8I	GATNNNNATC	1 cut(s)	387
BseBI	CCWGG	2 cut(s)	980, 2242
BseCI	ATCGAT	1 cut(s)	583
BseDI	CCNNGG	4 cut(s)	423, 932, 2087, 2093
BseGI	GGATG	9 cut(s)	337, 532, 675, 841, 1081, 1645, 2044, 2203, 2560
BseJI	GATNNNNATC	1 cut(s)	387
BseLI	CCNNNNNNNGG	7 cut(s)	446, 485, 1054, 1444, 1848, 1849, 2241
BseMI	GCAATG	1 cut(s)	2286
BseMII	CTCAG	8 cut(s)	333, 775, 777, 993, 1034, 1869, 2063, 2177
BseNI	ACTGG	7 cut(s)	32, 284, 960, 2231, 2289, 2301, 2364
BseRI	GAGGAG	3 cut(s)	1266, 1608, 2196
BseSI	GKGCMC	2 cut(s)	885, 1177
BseXI	GCAGC	9 cut(s)	128, 160, 1222, 1613, 1954, 2212, 2239, 2400, 2403
BseYI	CCCAGC	1 cut(s)	2508
Bsh1236I	CGCG	1 cut(s)	1557
Bsh1285I	CGRYCG	1 cut(s)	1910
BshFI	GGCC	5 cut(s)	883, 959, 1752, 2092, 2439
BshNI	GGYRCC	2 cut(s)	1936, 2098
BshVI	ATCGAT	1 cut(s)	583
BsiEI	CGRYCG	1 cut(s)	1910
BsiHKCI	CYCGRG	2 cut(s)	410, 2094
BsiSI	CCGG	3 cut(s)	1195, 1940, 2407
BslFI	GGGAC	3 cut(s)	263, 757, 1825
BslI	CCNNNNNNNGG	7 cut(s)	446, 485, 1054, 1444, 1848, 1849, 2241
BsmAI	GTCTC	6 cut(s)	752, 942, 1488, 1796, 1829, 2161
BsmBI	CGTCTC	1 cut(s)	1829
BsmFI	GGGAC	3 cut(s)	263, 757, 1825
BsmI	GAATGC	1 cut(s)	2022
BsnI	GGCC	5 cut(s)	883, 959, 1752, 2092, 2439
Bso31I	GGTCTC	3 cut(s)	752, 942, 1796
BsoBI	CYCGRG	2 cut(s)	410, 2094
Bsp120I	GGGCCC	1 cut(s)	881
Bsp1286I	GDGCHC	2 cut(s)	885, 1177
Bsp1720I	GCTNAGC	1 cut(s)	342
BspACI	CCGC	5 cut(s)	179, 1513, 1555, 1826, 2124
BspANI	GGCC	5 cut(s)	883, 959, 1752, 2092, 2439
BspCNI	CTCAG	8 cut(s)	334, 774, 778, 994, 1033, 1870, 2062, 2176
BspDI	ATCGAT	1 cut(s)	583
BspFNI	CGCG	1 cut(s)	1557
BspHI	TCATGA	1 cut(s)	433
BspLI	GGNNCC	7 cut(s)	251, 534, 773, 883, 1938, 2100, 2176
BspMAI	CTGCAG	2 cut(s)	919, 1978
BspMI	ACCTGC	2 cut(s)	199, 908
BspOI	GCTAGC	1 cut(s)	2349
BspPI	GGATC	6 cut(s)	496, 1186, 1425, 1450, 2150, 2552
BspT107I	GGYRCC	2 cut(s)	1936, 2098
BspTI	CTTAAG	1 cut(s)	2380
BspTNI	GGTCTC	3 cut(s)	752, 942, 1796
BsrDI	GCAATG	1 cut(s)	2286
BsrFI	RCCGGY	1 cut(s)	2406
BsrI	ACTGG	7 cut(s)	32, 284, 960, 2231, 2289, 2301, 2364
BssAI	RCCGGY	1 cut(s)	2406
BssECI	CCNNGG	4 cut(s)	423, 932, 2087, 2093
BssNI	GRCGYC	2 cut(s)	929, 1838
BssSI	CACGAG	1 cut(s)	1647
BssT1I	CCWWGG	2 cut(s)	423, 2087
Bst2BI	CACGAG	1 cut(s)	1647
Bst2UI	CCWGG	2 cut(s)	980, 2242
Bst4CI	ACNGT	7 cut(s)	140, 400, 746, 1159, 1908, 1950, 2276
Bst6I	CTCTTC	2 cut(s)	161, 218
BstACI	GRCGYC	2 cut(s)	929, 1838
BstAFI	CTTAAG	1 cut(s)	2380
BstC8I	GCNNGC	5 cut(s)	985, 1177, 1674, 2347, 2514
BstENI	CCTNNNNNAGG	1 cut(s)	1442
BstF5I	GGATG	9 cut(s)	337, 532, 675, 841, 1081, 1645, 2044, 2203, 2560
BstFNI	CGCG	1 cut(s)	1557
BstMAI	GTCTC	6 cut(s)	752, 942, 1488, 1796, 1829, 2161
BstMCI	CGRYCG	1 cut(s)	1910
BstMWI	GCNNNNNNNGC	7 cut(s)	122, 989, 1894, 1973, 2183, 2385, 2400
BstNI	CCWGG	2 cut(s)	980, 2242
BstNSI	RCATGY	2 cut(s)	1967, 2336
BstSCI	CCNGG	3 cut(s)	978, 1194, 2240
BstSFI	CTRYAG	3 cut(s)	915, 1335, 1974
BstSLI	GKGCMC	2 cut(s)	885, 1177
BstUI	CGCG	1 cut(s)	1557
BstV1I	GCAGC	9 cut(s)	128, 160, 1222, 1613, 1954, 2212, 2239, 2400, 2403
BstV2I	GAAGAC	3 cut(s)	369, 558, 1119
BstX2I	RGATCY	4 cut(s)	488, 1417, 2128, 2155
BstYI	RGATCY	4 cut(s)	488, 1417, 2128, 2155
Bsu15I	ATCGAT	1 cut(s)	583
BsuI	GTATCC	2 cut(s)	73, 2224
BsuRI	GGCC	5 cut(s)	883, 959, 1752, 2092, 2439
BsuTUI	ATCGAT	1 cut(s)	583
BtgZI	GCGATG	2 cut(s)	2550, 2555
BtsCI	GGATG	9 cut(s)	337, 532, 675, 841, 1081, 1645, 2044, 2203, 2560
BtsI	GCAGTG	1 cut(s)	2581
BtsIMutI	CAGTG	5 cut(s)	769, 1803, 2281, 2371, 2581
BveI	ACCTGC	2 cut(s)	199, 908
Cac8I	GCNNGC	5 cut(s)	985, 1177, 1674, 2347, 2514
CciI	TCATGA	1 cut(s)	433
Cfr10I	RCCGGY	1 cut(s)	2406
Cfr13I	GGNCC	7 cut(s)	250, 771, 881, 882, 1324, 1435, 1820
ClaI	ATCGAT	1 cut(s)	583
CseI	GACGC	2 cut(s)	605, 937
Csp6I	GTAC	5 cut(s)	1254, 1299, 1603, 1920, 2099
CviQI	GTAC	5 cut(s)	1254, 1299, 1603, 1920, 2099
DrdI	GACNNNNNNGTC	1 cut(s)	934
DseDI	GACNNNNNNGTC	1 cut(s)	934
EaeI	YGGCCR	1 cut(s)	1750
Eam1104I	CTCTTC	2 cut(s)	161, 218
EarI	CTCTTC	2 cut(s)	161, 218
Eco130I	CCWWGG	2 cut(s)	423, 2087
Eco147I	AGGCCT	1 cut(s)	2439
Eco24I	GRGCYC	1 cut(s)	885
Eco31I	GGTCTC	3 cut(s)	752, 942, 1796
Eco32I	GATATC	3 cut(s)	476, 1506, 2221
Eco47I	GGWCC	5 cut(s)	250, 771, 1324, 1435, 1820
Eco88I	CYCGRG	2 cut(s)	410, 2094
EcoNI	CCTNNNNNAGG	1 cut(s)	1442
EcoO109I	RGGNCCY	1 cut(s)	1435
EcoRI	GAATTC	1 cut(s)	57
EcoRII	CCWGG	2 cut(s)	978, 2240
EcoRV	GATATC	3 cut(s)	476, 1506, 2221
EcoT14I	CCWWGG	2 cut(s)	423, 2087
EcoT38I	GRGCYC	1 cut(s)	885
ErhI	CCWWGG	2 cut(s)	423, 2087
Esp3I	CGTCTC	1 cut(s)	1829
FalI	AAGNNNNNCTT	4 cut(s)	999, 1031, 1656, 1688
FaqI	GGGAC	3 cut(s)	263, 757, 1825
FbaI	TGATCA	4 cut(s)	388, 589, 892, 2137
FokI	GGATG	9 cut(s)	344, 539, 662, 848, 1088, 1652, 2031, 2190, 2567
FriOI	GRGCYC	1 cut(s)	885
FspBI	CTAG	5 cut(s)	126, 243, 483, 1394, 2346
GsaI	CCCAGC	1 cut(s)	2512
GsuI	CTGGAG	1 cut(s)	267
HaeIII	GGCC	5 cut(s)	883, 959, 1752, 2092, 2439
HapII	CCGG	3 cut(s)	1195, 1940, 2407
HgaI	GACGC	2 cut(s)	605, 937
Hin1I	GRCGYC	2 cut(s)	929, 1838
HincII	GTYRAC	2 cut(s)	1764, 2425
HindII	GTYRAC	2 cut(s)	1764, 2425
HindIII	AAGCTT	1 cut(s)	456
HpaII	CCGG	3 cut(s)	1195, 1940, 2407
HphI	GGTGA	1 cut(s)	2290
Hpy166II	GTNNAC	3 cut(s)	1764, 1922, 2425
Hpy8I	GTNNAC	3 cut(s)	1764, 1922, 2425
Hpy99I	CGWCG	1 cut(s)	746
HpyAV	CCTTC	9 cut(s)	322, 346, 426, 670, 838, 864, 2041, 2242, 2331
HpyCH4III	ACNGT	7 cut(s)	140, 400, 746, 1159, 1908, 1950, 2276
HpyCH4IV	ACGT	2 cut(s)	260, 1838
HpyF10VI	GCNNNNNNNGC	7 cut(s)	122, 989, 1894, 1973, 2183, 2385, 2400
HpySE526I	ACGT	2 cut(s)	260, 1838
Hsp92I	GRCGYC	2 cut(s)	929, 1838
KpnI	GGTACC	1 cut(s)	2102
Ksp22I	TGATCA	4 cut(s)	388, 589, 892, 2137
LmnI	GCTCC	5 cut(s)	145, 981, 1279, 2174, 2183
Lsp1109I	GCAGC	9 cut(s)	128, 160, 1222, 1613, 1954, 2212, 2239, 2400, 2403
LweI	GCATC	8 cut(s)	1138, 1261, 1891, 2195, 2212, 2359, 2525, 2578
MaeI	CTAG	5 cut(s)	126, 243, 483, 1394, 2346
MaeII	ACGT	2 cut(s)	260, 1838
MaeIII	GTNAC	5 cut(s)	97, 181, 727, 2291, 2306
MfeI	CAATTG	1 cut(s)	573
MflI	RGATCY	4 cut(s)	488, 1417, 2128, 2155
MhlI	GDGCHC	2 cut(s)	885, 1177
MlsI	TGGCCA	1 cut(s)	1752
MluNI	TGGCCA	1 cut(s)	1752
MlyI	GAGTC	3 cut(s)	665, 2122, 2462
MmeI	TCCRAC	4 cut(s)	27, 268, 560, 765
Mox20I	TGGCCA	1 cut(s)	1752
MroXI	GAANNNNTTC	1 cut(s)	272
MscI	TGGCCA	1 cut(s)	1752
MslI	CAYNNNNRTG	1 cut(s)	2574
Msp20I	TGGCCA	1 cut(s)	1752
MspA1I	CMGCKG	1 cut(s)	1826
MspCI	CTTAAG	1 cut(s)	2380
MspI	CCGG	3 cut(s)	1195, 1940, 2407
MspR9I	CCNGG	3 cut(s)	980, 1196, 2242
MunI	CAATTG	1 cut(s)	573
Mva1269I	GAATGC	1 cut(s)	2022
MvaI	CCWGG	2 cut(s)	980, 2242
MvnI	CGCG	1 cut(s)	1557
MwoI	GCNNNNNNNGC	7 cut(s)	122, 989, 1894, 1973, 2183, 2385, 2400
NciI	CCSGG	1 cut(s)	1196
NheI	GCTAGC	1 cut(s)	2345
NlaIV	GGNNCC	7 cut(s)	251, 534, 773, 883, 1938, 2100, 2176
NmeAIII	GCCGAG	1 cut(s)	957
NmuCI	GTSAC	1 cut(s)	727
NspI	RCATGY	2 cut(s)	1967, 2336
PagI	TCATGA	1 cut(s)	433
PceI	AGGCCT	1 cut(s)	2439
PciI	ACATGT	1 cut(s)	2332
PctI	GAATGC	1 cut(s)	2022
PdmI	GAANNNNTTC	1 cut(s)	272
PfeI	GAWTC	7 cut(s)	233, 322, 428, 737, 2317, 2360, 2500
PfoI	TCCNGGA	1 cut(s)	1194
PleI	GAGTC	3 cut(s)	664, 2121, 2461
PpsI	GAGTC	3 cut(s)	664, 2121, 2461
PpuMI	RGGWCCY	1 cut(s)	1435
PscI	ACATGT	1 cut(s)	2332
Psp5II	RGGWCCY	1 cut(s)	1435
Psp6I	CCWGG	2 cut(s)	978, 2240
PspFI	CCCAGC	1 cut(s)	2508
PspGI	CCWGG	2 cut(s)	978, 2240
PspN4I	GGNNCC	7 cut(s)	251, 534, 773, 883, 1938, 2100, 2176
PspOMI	GGGCCC	1 cut(s)	881
PspPI	GGNCC	7 cut(s)	250, 771, 881, 882, 1324, 1435, 1820
PspPPI	RGGWCCY	1 cut(s)	1435
PstI	CTGCAG	2 cut(s)	919, 1978
PsuI	RGATCY	4 cut(s)	488, 1417, 2128, 2155
RsaI	GTAC	5 cut(s)	1255, 1300, 1604, 1921, 2100
RsaNI	GTAC	5 cut(s)	1254, 1299, 1603, 1920, 2099
RseI	CAYNNNNRTG	1 cut(s)	2574
Sau96I	GGNCC	7 cut(s)	250, 771, 881, 882, 1324, 1435, 1820
SchI	GAGTC	3 cut(s)	665, 2122, 2462
ScrFI	CCNGG	3 cut(s)	980, 1196, 2242
SduI	GDGCHC	2 cut(s)	885, 1177
SfaNI	GCATC	8 cut(s)	1138, 1261, 1891, 2195, 2212, 2359, 2525, 2578
SfcI	CTRYAG	3 cut(s)	915, 1335, 1974
SinI	GGWCC	5 cut(s)	250, 771, 1324, 1435, 1820
SmiMI	CAYNNNNRTG	1 cut(s)	2574
SmlI	CTYRAG	2 cut(s)	1117, 2380
SmoI	CTYRAG	2 cut(s)	1117, 2380
SseBI	AGGCCT	1 cut(s)	2439
SsiI	CCGC	5 cut(s)	179, 1513, 1555, 1826, 2124
SspI	AATATT	1 cut(s)	1685
SspMI	CTAG	5 cut(s)	126, 243, 483, 1394, 2346
StuI	AGGCCT	1 cut(s)	2439
StyD4I	CCNGG	3 cut(s)	978, 1194, 2240
StyI	CCWWGG	2 cut(s)	423, 2087
TaaI	ACNGT	7 cut(s)	140, 400, 746, 1159, 1908, 1950, 2276
TaiI	ACGT	2 cut(s)	263, 1841
TaqI	TCGA	4 cut(s)	221, 583, 722, 1146
TaqII	GACCGA	2 cut(s)	267, 1341
TatI	WGTACW	1 cut(s)	1602
TauI	GCSGC	2 cut(s)	1557, 2126
TfiI	GAWTC	7 cut(s)	233, 322, 428, 737, 2317, 2360, 2500
TscAI	CASTG	5 cut(s)	769, 1810, 2281, 2371, 2581
TseFI	GTSAC	1 cut(s)	727
TseI	GCWGC	9 cut(s)	116, 148, 1210, 1626, 1967, 2200, 2252, 2388, 2391
Tsp45I	GTSAC	1 cut(s)	727
TspGWI	ACGGA	1 cut(s)	1448
TspRI	CASTG	5 cut(s)	769, 1810, 2281, 2371, 2581
Vha464I	CTTAAG	1 cut(s)	2380
VpaK11BI	GGWCC	5 cut(s)	250, 771, 1324, 1435, 1820
XagI	CCTNNNNNAGG	1 cut(s)	1442
XapI	RAATTY	5 cut(s)	57, 272, 564, 718, 1618
XceI	RCATGY	2 cut(s)	1967, 2336
XmnI	GAANNNNTTC	1 cut(s)	272
XspI	CTAG	5 cut(s)	126, 243, 483, 1394, 2346
ZraI	GACGTC	1 cut(s)	1839

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.