AT3G18000

phosphoethanolamine N-methyltransferase activity

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Forward (+)
6154363 .. 6157552
3190 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G18000.1

Sequence Viewer

Length: 1476 bp
ATGGCTGCATCGTACGAAGAAGAGCGTGATATTCAGAAGAATTACTGGATAGAGCATTCCGCTGATCTGACTGTTGAAGCTATGATGCTTGACTCGAGAGCTTCTGATCTCGACAAGGAAGAACGTCCTGAGGTACTCTCTTTGCTCCCTCCATATGAAGGCAAATCAGTGTTGGAACTTGGAGCTGGTATTGGTCGTTTCACTGGTGAATTAGCTCAAAAGGCTGGTGAACTCATTGCTCTTGACTTCATTGATAACGTTATCAAGAAGAATGAAAGTATCAATGGGCATTACAAGAATGTCAAGTTTATGTGTGCTGATGTTACATCCCCTGACCTCAAGATCACTGATGGATCTCTTGACTTGATTTTCTCCAACTGGCTGCTCATGTATCTTTCTGACAAAGAGGTGGAGCTTTTGGCAGAAAGGATGGTCGGTTGGATCAAGGTTGGAGGATACATTTTCTTCCGTGAATCTTGCTTCCACCAATCAGGGGACAGTAAGCGGAAATCCAACCCCACTCACTACCGTGAACCCCGTTTCTATTCCAAGGTCTTTCAAGAGTGTCAGACTCGGGATGCTGCTGGAAATTCATTTGAGCTCTCTATGATCGGATGCAAGTGCATTGGAGCTTATGTCAAGAACAAGAAGAATCAGAATCAGATTTGTTGGATATGGCAGAAGGTCAGCTCAGAAAATGACAGAGGCTTCCAACGTTTCTTGGACAATGTCCAATACAAATCCAGTGGAATCCTACGCTATGAGCGTGTCTTTGGCCAAGGGTTTGTGAGCACTGGTGGACTTGAGACAACCAAAGAATTTGTGGAGAAAATGAATCTGAAACCAGGACAGAAAGTCTTAGATGTTGGGTGTGGCATTGGTGGAGGTGACTTCTACATGGCTGAGAAGTTTGATGTTCACGTTGTTGGTATCGATCTTTCTGTCAACATGATCTCTTTCGCATTGGAACGTGCTATTGGACTCAGCTGCTCGGTTGAGTTTGAGGTTGCTGATTGCACCACAAAACACTACCCAGATAATTCGTTTGATGTCATTTACAGCCGTGACACTATTCTGCACATCCAAGACAAACCAGCCTTGTTTAGGACTTTCTTCAAATGGCTTAAACCGGGAGGTAAAGTTCTCATCAGCGACTACTGTAGAAGCCCCAAAACTCCATCTGCTGAGTTTTCAGAGTACATCAAACAGAGAGGATATGATCTCCATGACGTTCAAGCTTATGGACAGATGCTAAAAGACGCTGGCTTCACTGATGTGATCGCAGAGGACCGTACTGATCAGTTTATGCAAGTCCTGAAACGTGAATTAGACAGGGTGGAGAAAGAAAAGGAAAAATTCATCTCCGACTTCTCCAAAGAGGATTACGATGACATTGTTGGAGGATGGAAGTCAAAGCTGGAGAGGTGTGCATCGGATGAGCAGAAATGGGGACTTTTCATCGCCAACAAGAATTAA

Protein Analysis

491

Amino Acids

56.1

Weight (kDa)

5.39

Isoelectric Point (pI)

30.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_31 PF13847 54 - 177 2.9e-10 Methyltransferase domain
Methyltransf_PK PF05891 55 - 190 7.1e-07 AdoMet dependent proline di-methyltransferase
Methyltransf_25 PF13649 57 - 152 1.7e-11 Methyltransferase domain
Methyltransf_11 PF08241 58 - 156 1.5e-11 Methyltransferase domain
Methyltransf_12 PF08242 58 - 153 7.6e-07 Methyltransferase domain
Ubie_methyltran PF01209 272 - 388 3.5e-11 ubiE/COQ5 methyltransferase family
CMAS PF02353 272 - 477 3.7e-16 Mycolic acid cyclopropane synthetase
Methyltransf_23 PF13489 277 - 426 1.3e-20 Methyltransferase domain
MetW PF07021 280 - 362 2.6e-07 Methionine biosynthesis protein MetW
Methyltransf_31 PF13847 281 - 400 5.4e-23 Methyltransferase domain
Methyltransf_25 PF13649 286 - 379 9.2e-20 Methyltransferase domain
Methyltransf_11 PF08241 287 - 383 2.1e-19 Methyltransferase domain
Methyltransf_12 PF08242 287 - 380 1.4e-13 Methyltransferase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 60, 505
AclI AACGTT 2 cut(s) 258, 715
AclWI GGATC 2 cut(s) 361, 449
AcoI YGGCCR 1 cut(s) 775
AcsI RAATTY 3 cut(s) 589, 818, 1355
AfaI GTAC 4 cut(s) 14, 135, 1199, 1294
AfiI CCNNNNNNNGG 3 cut(s) 158, 493, 1104
AgsI TTSAA 4 cut(s) 77, 560, 1117, 1235
AhdI GACNNNNNGTC 1 cut(s) 854
AjnI CCWGG 1 cut(s) 844
AjuI GAANNNNNNNTTGG 2 cut(s) 960, 992
AleI CACNNNNGTG 2 cut(s) 528, 1274
AloI GAACNNNNNNTCC 2 cut(s) 1125, 1157
Alw21I GWGCWC 2 cut(s) 603, 794
Alw26I GTCTC 1 cut(s) 800
AlwI GGATC 2 cut(s) 361, 449
Ama87I CYCGRG 2 cut(s) 94, 573
AoxI GGCC 1 cut(s) 775
ApeKI GCWGC 4 cut(s) 5, 382, 581, 987
ApoI RAATTY 3 cut(s) 589, 818, 1355
AspS9I GGNCC 1 cut(s) 1288
AsuC2I CCSGG 1 cut(s) 1131
AsuHPI GGTGA 3 cut(s) 218, 239, 899
AvaI CYCGRG 2 cut(s) 94, 573
AvaII GGWCC 1 cut(s) 1288
AxyI CCTNAGG 1 cut(s) 129
BalI TGGCCA 1 cut(s) 777
BanII GRGCYC 1 cut(s) 603
Bbv12I GWGCWC 2 cut(s) 603, 794
BbvI GCAGC 3 cut(s) 369, 568, 974
BccI CCATC 4 cut(s) 344, 424, 1186, 1398
BceAI ACGGC 1 cut(s) 1047
BciT130I CCWGG 1 cut(s) 846
BciVI GTATCC 1 cut(s) 449
BclI TGATCA 1 cut(s) 1297
BcnI CCSGG 1 cut(s) 1131
BcoDI GTCTC 1 cut(s) 800
BfmI CTRYAG 1 cut(s) 1159
BfuI GTATCC 1 cut(s) 449
BisI GCNGC 4 cut(s) 6, 383, 582, 988
BlsI GCNGC 4 cut(s) 7, 384, 583, 989
Bme1390I CCNGG 2 cut(s) 846, 1131
Bme18I GGWCC 1 cut(s) 1288
BmeRI GACNNNNNGTC 1 cut(s) 854
BmeT110I CYCGRG 2 cut(s) 94, 573
BmgT120I GGNCC 1 cut(s) 1288
BmrFI CCNGG 2 cut(s) 846, 1131
BmsI GCATC 6 cut(s) 17, 75, 568, 605, 1239, 1439
BplI GAGNNNNNCTC 2 cut(s) 122, 154
BpmI CTGGAG 1 cut(s) 1439
BpuEI CTTGAG 2 cut(s) 323, 824
BpuMI CCSGG 1 cut(s) 1131
Bsa29I ATCGAT 1 cut(s) 933
BsaJI CCNNGG 2 cut(s) 549, 778
BsaXI ACNNNNNCTCC 4 cut(s) 621, 651, 1125, 1155
Bsc4I CCNNNNNNNGG 3 cut(s) 158, 493, 1104
Bse1I ACTGG 5 cut(s) 50, 208, 383, 744, 799
Bse21I CCTNAGG 1 cut(s) 129
Bse3DI GCAATG 1 cut(s) 234
BseBI CCWGG 1 cut(s) 846
BseCI ATCGAT 1 cut(s) 933
BseDI CCNNGG 2 cut(s) 549, 778
BseGI GGATG 7 cut(s) 326, 435, 583, 620, 1080, 1409, 1441
BseLI CCNNNNNNNGG 3 cut(s) 158, 493, 1104
BseMI GCAATG 1 cut(s) 234
BseMII CTCAG 5 cut(s) 120, 705, 894, 997, 1176
BseNI ACTGG 5 cut(s) 50, 208, 383, 744, 799
BseXI GCAGC 3 cut(s) 369, 568, 974
BsgI GTGCAG 1 cut(s) 1061
BshFI GGCC 1 cut(s) 777
BshVI ATCGAT 1 cut(s) 933
BsiHKAI GWGCWC 2 cut(s) 603, 794
BsiHKCI CYCGRG 2 cut(s) 94, 573
BsiSI CCGG 1 cut(s) 1130
BsiWI CGTACG 1 cut(s) 12
BslFI GGGAC 2 cut(s) 509, 1464
BslI CCNNNNNNNGG 3 cut(s) 158, 493, 1104
BsmAI GTCTC 1 cut(s) 800
BsmFI GGGAC 2 cut(s) 509, 1464
BsmI GAATGC 1 cut(s) 55
BsnI GGCC 1 cut(s) 777
BsoBI CYCGRG 2 cut(s) 94, 573
Bsp1286I GDGCHC 2 cut(s) 603, 794
BspACI CCGC 2 cut(s) 60, 505
BspANI GGCC 1 cut(s) 777
BspCNI CTCAG 5 cut(s) 121, 704, 895, 996, 1177
BspDI ATCGAT 1 cut(s) 933
BspPI GGATC 2 cut(s) 361, 449
BspQI GCTCTTC 1 cut(s) 15
BsrDI GCAATG 1 cut(s) 234
BsrI ACTGG 5 cut(s) 50, 208, 383, 744, 799
BssECI CCNNGG 2 cut(s) 549, 778
BssT1I CCWWGG 2 cut(s) 549, 778
Bst2UI CCWGG 1 cut(s) 846
Bst4CI ACNGT 5 cut(s) 73, 500, 530, 1160, 1292
Bst6I CTCTTC 1 cut(s) 15
BstC8I GCNNGC 1 cut(s) 1264
BstDEI CTNAG 6 cut(s) 129, 691, 859, 903, 983, 1185
BstENI CCTNNNNNAGG 1 cut(s) 1102
BstF5I GGATG 7 cut(s) 326, 435, 583, 620, 1080, 1409, 1441
BstMAI GTCTC 1 cut(s) 800
BstMWI GCNNNNNNNGC 1 cut(s) 221
BstNI CCWGG 1 cut(s) 846
BstSCI CCNGG 2 cut(s) 844, 1129
BstSFI CTRYAG 1 cut(s) 1159
BstV1I GCAGC 3 cut(s) 369, 568, 974
BstX2I RGATCY 1 cut(s) 353
BstYI RGATCY 1 cut(s) 353
Bsu15I ATCGAT 1 cut(s) 933
Bsu36I CCTNAGG 1 cut(s) 129
BsuI GTATCC 1 cut(s) 449
BsuRI GGCC 1 cut(s) 777
BsuTUI ATCGAT 1 cut(s) 933
BtgZI GCGATG 1 cut(s) 1444
BtsCI GGATG 7 cut(s) 326, 435, 583, 620, 1080, 1409, 1441
BtsIMutI CAGTG 6 cut(s) 174, 201, 345, 751, 792, 1269
Cac8I GCNNGC 1 cut(s) 1264
Cfr13I GGNCC 1 cut(s) 1288
ClaI ATCGAT 1 cut(s) 933
CseI GACGC 1 cut(s) 1268
Csp6I GTAC 4 cut(s) 13, 134, 1198, 1293
CspCI CAANNNNNGTGG 2 cut(s) 727, 762
CviAII CATG 4 cut(s) 388, 898, 949, 1226
CviQI GTAC 4 cut(s) 13, 134, 1198, 1293
DdeI CTNAG 6 cut(s) 129, 691, 859, 903, 983, 1185
DriI GACNNNNNGTC 1 cut(s) 854
EaeI YGGCCR 1 cut(s) 775
Eam1104I CTCTTC 1 cut(s) 15
Eam1105I GACNNNNNGTC 1 cut(s) 854
EarI CTCTTC 1 cut(s) 15
Ecl136II GAGCTC 1 cut(s) 601
Eco130I CCWWGG 2 cut(s) 549, 778
Eco24I GRGCYC 1 cut(s) 603
Eco47I GGWCC 1 cut(s) 1288
Eco53kI GAGCTC 1 cut(s) 601
Eco81I CCTNAGG 1 cut(s) 129
Eco88I CYCGRG 2 cut(s) 94, 573
EcoICRI GAGCTC 1 cut(s) 601
EcoNI CCTNNNNNAGG 1 cut(s) 1102
EcoRII CCWGG 1 cut(s) 844
EcoT14I CCWWGG 2 cut(s) 549, 778
EcoT38I GRGCYC 1 cut(s) 603
ErhI CCWWGG 2 cut(s) 549, 778
FaeI CATG 4 cut(s) 391, 901, 952, 1229
FaqI GGGAC 2 cut(s) 509, 1464
FatI CATG 4 cut(s) 387, 897, 948, 1225
FauNDI CATATG 1 cut(s) 154
FbaI TGATCA 1 cut(s) 1297
Fnu4HI GCNGC 4 cut(s) 6, 383, 582, 988
FokI GGATG 7 cut(s) 313, 442, 590, 627, 1067, 1416, 1448
FriOI GRGCYC 1 cut(s) 603
Fsp4HI GCNGC 4 cut(s) 6, 383, 582, 988
GluI GCNGC 4 cut(s) 6, 383, 582, 988
GsuI CTGGAG 1 cut(s) 1439
HaeIII GGCC 1 cut(s) 777
HapII CCGG 1 cut(s) 1130
HgaI GACGC 1 cut(s) 1268
Hin1II CATG 4 cut(s) 391, 901, 952, 1229
HincII GTYRAC 1 cut(s) 946
HindII GTYRAC 1 cut(s) 946
HindIII AAGCTT 1 cut(s) 1236
HinfI GANTC 8 cut(s) 92, 473, 571, 652, 658, 750, 835, 981
HpaII CCGG 1 cut(s) 1130
HphI GGTGA 3 cut(s) 218, 239, 899
Hpy166II GTNNAC 5 cut(s) 230, 533, 800, 919, 946
Hpy8I GTNNAC 5 cut(s) 230, 533, 800, 919, 946
HpyAV CCTTC 2 cut(s) 152, 676
HpyCH4III ACNGT 5 cut(s) 73, 500, 530, 1160, 1292
HpyCH4IV ACGT 7 cut(s) 124, 258, 715, 921, 970, 1230, 1321
HpyCH4V TGCA 7 cut(s) 8, 618, 624, 1017, 1078, 1309, 1430
HpyF10VI GCNNNNNNNGC 1 cut(s) 221
HpyF3I CTNAG 6 cut(s) 129, 691, 859, 903, 983, 1185
HpySE526I ACGT 7 cut(s) 124, 258, 715, 921, 970, 1230, 1321
Hsp92II CATG 4 cut(s) 391, 901, 952, 1229
Ksp22I TGATCA 1 cut(s) 1297
LguI GCTCTTC 1 cut(s) 15
LmnI GCTCC 4 cut(s) 150, 182, 412, 629
Lsp1109I GCAGC 3 cut(s) 369, 568, 974
LweI GCATC 6 cut(s) 17, 75, 568, 605, 1239, 1439
MaeII ACGT 7 cut(s) 124, 258, 715, 921, 970, 1230, 1321
MaeIII GTNAC 3 cut(s) 322, 887, 1064
MboII GAAGA 8 cut(s) 29, 32, 49, 131, 280, 457, 661, 1105
MflI RGATCY 1 cut(s) 353
MhlI GDGCHC 2 cut(s) 603, 794
MlsI TGGCCA 1 cut(s) 777
MluCI AATT 8 cut(s) 40, 209, 589, 818, 1039, 1325, 1355, 1471
MluNI TGGCCA 1 cut(s) 777
MlyI GAGTC 3 cut(s) 86, 565, 975
MmeI TCCRAC 9 cut(s) 153, 399, 419, 430, 537, 650, 736, 1378, 1389
Mox20I TGGCCA 1 cut(s) 777
MscI TGGCCA 1 cut(s) 777
MseI TTAA 2 cut(s) 1125, 1474
MslI CAYNNNNRTG 2 cut(s) 528, 1274
Msp20I TGGCCA 1 cut(s) 777
MspA1I CMGCKG 2 cut(s) 62, 987
MspI CCGG 1 cut(s) 1130
MspR9I CCNGG 2 cut(s) 846, 1131
Mva1269I GAATGC 1 cut(s) 55
MvaI CCWGG 1 cut(s) 846
MwoI GCNNNNNNNGC 1 cut(s) 221
NciI CCSGG 1 cut(s) 1131
NdeI CATATG 1 cut(s) 154
NlaIII CATG 4 cut(s) 391, 901, 952, 1229
NmuCI GTSAC 2 cut(s) 887, 1064
OliI CACNNNNGTG 2 cut(s) 528, 1274
PaeR7I CTCGAG 1 cut(s) 94
PciSI GCTCTTC 1 cut(s) 15
PcsI WCGNNNNNNNCGW 1 cut(s) 763
PctI GAATGC 1 cut(s) 55
PfeI GAWTC 5 cut(s) 473, 652, 658, 750, 835
Pfl23II CGTACG 1 cut(s) 12
PflFI GACNNNGTC 1 cut(s) 728
PkrI GCNGC 4 cut(s) 7, 384, 583, 989
PleI GAGTC 3 cut(s) 86, 565, 975
PpsI GAGTC 3 cut(s) 86, 565, 975
Psp124BI GAGCTC 1 cut(s) 603
Psp1406I AACGTT 2 cut(s) 258, 715
Psp6I CCWGG 1 cut(s) 844
PspGI CCWGG 1 cut(s) 844
PspLI CGTACG 1 cut(s) 12
PspPI GGNCC 1 cut(s) 1288
PsuI RGATCY 1 cut(s) 353
PsyI GACNNNGTC 1 cut(s) 728
PvuII CAGCTG 1 cut(s) 987
RsaI GTAC 4 cut(s) 14, 135, 1199, 1294
RsaNI GTAC 4 cut(s) 13, 134, 1198, 1293
RseI CAYNNNNRTG 2 cut(s) 528, 1274
SacI GAGCTC 1 cut(s) 603
SapI GCTCTTC 1 cut(s) 15
SaqAI TTAA 2 cut(s) 1125, 1474
SatI GCNGC 4 cut(s) 6, 383, 582, 988
Sau96I GGNCC 1 cut(s) 1288
SchI GAGTC 3 cut(s) 86, 565, 975
ScrFI CCNGG 2 cut(s) 846, 1131
SduI GDGCHC 2 cut(s) 603, 794
SfaNI GCATC 6 cut(s) 17, 75, 568, 605, 1239, 1439
SfcI CTRYAG 1 cut(s) 1159
Sfr274I CTCGAG 1 cut(s) 94
SinI GGWCC 1 cut(s) 1288
SlaI CTCGAG 1 cut(s) 94
SmiMI CAYNNNNRTG 2 cut(s) 528, 1274
SmlI CTYRAG 3 cut(s) 94, 338, 803
SmoI CTYRAG 3 cut(s) 94, 338, 803
Sse9I AATT 8 cut(s) 40, 209, 589, 818, 1039, 1325, 1355, 1471
SsiI CCGC 2 cut(s) 60, 505
SstI GAGCTC 1 cut(s) 603
StyD4I CCNGG 2 cut(s) 844, 1129
StyI CCWWGG 2 cut(s) 549, 778
TaaI ACNGT 5 cut(s) 73, 500, 530, 1160, 1292
TaiI ACGT 7 cut(s) 127, 261, 718, 924, 973, 1233, 1324
TaqI TCGA 3 cut(s) 95, 111, 933
TasI AATT 8 cut(s) 40, 209, 589, 818, 1039, 1325, 1355, 1471
TatI WGTACW 1 cut(s) 1197
TfiI GAWTC 5 cut(s) 473, 652, 658, 750, 835
Tru1I TTAA 2 cut(s) 1125, 1474
Tru9I TTAA 2 cut(s) 1125, 1474
TscAI CASTG 6 cut(s) 174, 208, 352, 751, 799, 1276
TseFI GTSAC 2 cut(s) 887, 1064
TseI GCWGC 4 cut(s) 5, 382, 581, 987
Tsp45I GTSAC 2 cut(s) 887, 1064
TspDTI ATGAA 7 cut(s) 171, 238, 288, 582, 848, 1348, 1447
TspGWI ACGGA 1 cut(s) 458
TspRI CASTG 6 cut(s) 174, 208, 352, 751, 799, 1276
Tth111I GACNNNGTC 1 cut(s) 728
VpaK11BI GGWCC 1 cut(s) 1288
XagI CCTNNNNNAGG 1 cut(s) 1102
XapI RAATTY 3 cut(s) 589, 818, 1355
XcmI CCANNNNNNNNNTGG 1 cut(s) 820
XhoI CTCGAG 1 cut(s) 94
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.