FvH4_5g17300

Phosphoethanolamine N-methyltransferase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Reverse (-)
9876493 .. 9880887
4395 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g17300.t2

Sequence Viewer

Length: 1395 bp
ATGATGCTGGACTCCAAGGCCTCCGATCTTGACAAAGAAGAGCGGCCTGAGGTGCTTGCCATGCTCCCGCCCTATGAGGGTAAATCGGTCTTGGAACTGGGAGCTGGGATCGGTCGTTTCACTGGCGAATTAGCCCAGAAGGCTGGTCAGCTCATTGCGATGGACTTCATTGAAAATGTGATAAAGAAGAATGAAAGCATCAATGGAAACCACAAGAACGTCAAGTTCATGTGTGCTGATGTGACATCCCCTGACCTGAAGATATCTGAAGAATCAGTAGATTTGATTTTCTCAAACTGGCTTCTTATGTATCTATGTGATAAGGAGGTGGAGAATTTGGCAGCAAGGATGATGAAATGGTTGAAGGTCGGTGGGTACATTTTCTTCAGAGAATCTTGTTTCCACCAATCTGGGGACTGTAAGCGAAAATACAACCCAACCCATTACCGAGAACCCCGATTTTACAGCAAGGTGTTTAAGCAATGCCATATGCGTGACGAATCTGGGAATTACTTTGAACTCTCTCTTATAAGCTGCAAATGTATTGGAGCTTATGTTCGGAACAAAAAGAATCAAAATCAGATTTGCTGGATATGGCAGAAAGTCGCTTCCCACAATGATAGAGGGTTCCAGCAGTTCTTAGATAATGTCCAGTATAAGAGTAATGGAATATTACGATATGAGCGTGTCTTTGGGCCGGGATTTGTGAGCACAGGAGGCCTTGAGACAACTAAGGAATTTGTGGCAAAGTTGGAACTTAAGCCTGGCCAGAAAGTTTTAGATGTTGGCTGTGGAATTGGGGGAGGTGACTTTTACATGGCCAGTACCTTTGATGTTGAGGTTGTTGGCATTGACCTCTCTGTAAACATGATTTCCTTTGCCCTTGAACAATCCATTGGACTCAAATGCGCTGTCGAGTTTGAAGTTGCGGATTGCACCACAAAAACATATCCAGACAACAGCTTTGATGTGATATACAGCCGCGACACCATTTTACACATTCAAGACAAGCCTGCATTATTCCGATCCTTTTACAAGTGGTTGAAGCCTGGAGGTAAAGTTCTCATCACTGACTACTGTAGGAGTGCTGGAACTCCGTCTGCAGAATTTGCCGAGTACATAAAGCAAAGAGGATATGACCTCCATGATGTAAAAGCATATGGTCAGATGCTTACGGATGCTGGTTTTGTTGATGTCGTTGCTGAGGATCGTACTGATCAGTTCATAAGAGTTCTGCAGCGGGAATTAAATGCCGTTGAGAAGGACAAGGAGGCATTCATCAAGGACTTTTCTGAAGAGGACTACAATGACATCGTTGGTGGATGGAAGGCAAAGCTGGTCAGGACAAACTCAGGAGAGCAGAAGTGGGGCCTCTTCATTGCCAAGAAGAAATGA

Protein Analysis

465

Amino Acids

52.83

Weight (kDa)

6.25

Isoelectric Point (pI)

30.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_23 PF13489 53 - 169 7.1e-06 Methyltransferase domain
Methyltransf_31 PF13847 63 - 171 6.6e-11 Methyltransferase domain
Methyltransf_PK PF05891 64 - 200 1.1e-08 AdoMet dependent proline di-methyltransferase
TehB PF03848 65 - 164 4.4e-06 Tellurite resistance protein TehB
Methyltransf_25 PF13649 66 - 161 1.9e-13 Methyltransferase domain
Methyltransf_11 PF08241 67 - 165 6.4e-14 Methyltransferase domain
Methyltransf_12 PF08242 67 - 163 3.3e-08 Methyltransferase domain
Ubie_methyltran PF01209 281 - 398 6.4e-10 ubiE/COQ5 methyltransferase family
CMAS PF02353 281 - 469 1.2e-13 Mycolic acid cyclopropane synthetase
Methyltransf_23 PF13489 284 - 434 2e-19 Methyltransferase domain
Methyltransf_31 PF13847 290 - 399 3.4e-21 Methyltransferase domain
Methyltransf_25 PF13649 295 - 388 1.1e-18 Methyltransferase domain
Methyltransf_11 PF08241 296 - 392 1.5e-19 Methyltransferase domain
Methyltransf_12 PF08242 296 - 389 2.1e-13 Methyltransferase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 530
AccBSI CCGCTC 1 cut(s) 43
AccII CGCG 1 cut(s) 984
AciI CCGC 5 cut(s) 43, 68, 929, 982, 1240
AclWI GGATC 3 cut(s) 116, 1020, 1215
AcoI YGGCCR 2 cut(s) 766, 819
AcsI RAATTY 3 cut(s) 334, 737, 1106
AcuI CTGAAG 4 cut(s) 278, 288, 370, 1314
AfaI GTAC 4 cut(s) 377, 826, 1118, 1213
AfiI CCNNNNNNNGG 2 cut(s) 77, 412
AflII CTTAAG 1 cut(s) 758
AgsI TTSAA 7 cut(s) 173, 364, 518, 887, 923, 1004, 1045
AjnI CCWGG 2 cut(s) 763, 1048
AjuI GAANNNNNNNTTGG 2 cut(s) 879, 911
AloI GAACNNNNNNTCC 4 cut(s) 540, 572, 1044, 1076
AluBI AGCT 6 cut(s) 104, 151, 534, 551, 963, 1336
AluI AGCT 6 cut(s) 104, 151, 534, 551, 963, 1336
Alw21I GWGCWC 1 cut(s) 713
Alw26I GTCTC 1 cut(s) 719
AlwI GGATC 3 cut(s) 116, 1020, 1215
AoxI GGCC 7 cut(s) 18, 44, 695, 718, 766, 819, 1369
ApeKI GCWGC 3 cut(s) 341, 534, 1237
ApoI RAATTY 3 cut(s) 334, 737, 1106
ArsI GACNNNNNNTTYG 4 cut(s) 897, 929, 947, 979
AspLEI GCGC 1 cut(s) 911
AspS9I GGNCC 2 cut(s) 695, 1369
AsuC2I CCSGG 1 cut(s) 699
AsuHPI GGTGA 1 cut(s) 818
AxyI CCTNAGG 1 cut(s) 48
BalI TGGCCA 2 cut(s) 768, 821
BarI GAAGNNNNNNTAC 2 cut(s) 368, 400
Bbv12I GWGCWC 1 cut(s) 713
BbvCI CCTCAGC 1 cut(s) 1203
BbvI GCAGC 3 cut(s) 353, 521, 1249
BccI CCATC 2 cut(s) 154, 1317
BceAI ACGGC 1 cut(s) 1238
BciT130I CCWGG 2 cut(s) 765, 1050
BclI TGATCA 1 cut(s) 1216
BcnI CCSGG 1 cut(s) 699
BcoDI GTCTC 1 cut(s) 719
BfmI CTRYAG 3 cut(s) 1078, 1101, 1235
BfrI CTTAAG 1 cut(s) 758
BglI GCCNNNNNGGC 1 cut(s) 140
BisI GCNGC 5 cut(s) 44, 342, 535, 982, 1238
BlsI GCNGC 5 cut(s) 45, 343, 536, 983, 1239
Bme1390I CCNGG 3 cut(s) 699, 765, 1050
BmgT120I GGNCC 2 cut(s) 695, 1369
BmiI GGNNCC 2 cut(s) 629, 1370
BmrFI CCNGG 3 cut(s) 699, 765, 1050
BmrI ACTGGG 1 cut(s) 107
BmsI GCATC 3 cut(s) 207, 1158, 1168
BmuI ACTGGG 1 cut(s) 107
BpmI CTGGAG 1 cut(s) 1071
Bpu10I CCTNAGC 1 cut(s) 1203
BpuEI CTTGAG 1 cut(s) 743
BpuMI CCSGG 1 cut(s) 699
BsaJI CCNNGG 1 cut(s) 15
BsaXI ACNNNNNCTCC 4 cut(s) 540, 570, 1044, 1074
Bsc4I CCNNNNNNNGG 2 cut(s) 77, 412
Bse1I ACTGG 5 cut(s) 102, 127, 302, 652, 822
Bse21I CCTNAGG 1 cut(s) 48
Bse3DI GCAATG 3 cut(s) 153, 488, 1377
BseBI CCWGG 2 cut(s) 765, 1050
BseDI CCNNGG 1 cut(s) 15
BseGI GGATG 4 cut(s) 245, 354, 1183, 1328
BseLI CCNNNNNNNGG 2 cut(s) 77, 412
BseMI GCAATG 3 cut(s) 153, 488, 1377
BseMII CTCAG 3 cut(s) 39, 1194, 1365
BseNI ACTGG 5 cut(s) 102, 127, 302, 652, 822
BseXI GCAGC 3 cut(s) 353, 521, 1249
BseYI CCCAGC 1 cut(s) 104
Bsh1236I CGCG 1 cut(s) 984
Bsh1285I CGRYCG 1 cut(s) 115
BshFI GGCC 7 cut(s) 20, 46, 697, 720, 768, 821, 1371
BsiEI CGRYCG 1 cut(s) 115
BsiHKAI GWGCWC 1 cut(s) 713
BsiSI CCGG 1 cut(s) 698
BslFI GGGAC 1 cut(s) 428
BslI CCNNNNNNNGG 2 cut(s) 77, 412
BsmAI GTCTC 1 cut(s) 719
BsmFI GGGAC 1 cut(s) 428
BsmI GAATGC 1 cut(s) 1274
BsnI GGCC 7 cut(s) 20, 46, 697, 720, 768, 821, 1371
Bsp1286I GDGCHC 1 cut(s) 713
Bsp143I GATC 5 cut(s) 25, 108, 1025, 1207, 1216
BspACI CCGC 5 cut(s) 43, 68, 929, 982, 1240
BspANI GGCC 7 cut(s) 20, 46, 697, 720, 768, 821, 1371
BspCNI CTCAG 3 cut(s) 40, 1195, 1364
BspFNI CGCG 1 cut(s) 984
BspLI GGNNCC 2 cut(s) 629, 1370
BspMAI CTGCAG 2 cut(s) 1105, 1239
BspPI GGATC 3 cut(s) 116, 1020, 1215
BspQI GCTCTTC 1 cut(s) 33
BspTI CTTAAG 1 cut(s) 758
BsrBI CCGCTC 1 cut(s) 43
BsrDI GCAATG 3 cut(s) 153, 488, 1377
BsrI ACTGG 5 cut(s) 102, 127, 302, 652, 822
BssECI CCNNGG 1 cut(s) 15
BssMI GATC 5 cut(s) 25, 108, 1025, 1207, 1216
BssT1I CCWWGG 1 cut(s) 15
Bst2UI CCWGG 2 cut(s) 765, 1050
Bst4CI ACNGT 2 cut(s) 419, 1079
Bst6I CTCTTC 3 cut(s) 33, 1290, 1379
BstAFI CTTAAG 1 cut(s) 758
BstAPI GCANNNNNTGC 1 cut(s) 1109
BstC8I GCNNGC 2 cut(s) 57, 1014
BstDEI CTNAG 5 cut(s) 48, 640, 732, 1203, 1351
BstF5I GGATG 4 cut(s) 245, 354, 1183, 1328
BstFNI CGCG 1 cut(s) 984
BstHHI GCGC 1 cut(s) 911
BstKTI GATC 5 cut(s) 28, 111, 1028, 1210, 1219
BstMAI GTCTC 1 cut(s) 719
BstMBI GATC 5 cut(s) 25, 108, 1025, 1207, 1216
BstMCI CGRYCG 1 cut(s) 115
BstMWI GCNNNNNNNGC 5 cut(s) 52, 61, 140, 717, 1109
BstNI CCWGG 2 cut(s) 765, 1050
BstSCI CCNGG 3 cut(s) 697, 763, 1048
BstSFI CTRYAG 3 cut(s) 1078, 1101, 1235
BstUI CGCG 1 cut(s) 984
BstV1I GCAGC 3 cut(s) 353, 521, 1249
BstXI CCANNNNNNTGG 2 cut(s) 143, 410
Bsu36I CCTNAGG 1 cut(s) 48
BsuRI GGCC 7 cut(s) 20, 46, 697, 720, 768, 821, 1371
BtgZI GCGATG 1 cut(s) 173
BtsCI GGATG 4 cut(s) 245, 354, 1183, 1328
BtsIMutI CAGTG 2 cut(s) 120, 1068
Cac8I GCNNGC 2 cut(s) 57, 1014
CfoI GCGC 1 cut(s) 911
Cfr13I GGNCC 2 cut(s) 695, 1369
Csp6I GTAC 4 cut(s) 376, 825, 1117, 1212
CviAII CATG 5 cut(s) 61, 229, 817, 868, 1145
CviQI GTAC 4 cut(s) 376, 825, 1117, 1212
DdeI CTNAG 5 cut(s) 48, 640, 732, 1203, 1351
DpnI GATC 5 cut(s) 27, 110, 1027, 1209, 1218
DpnII GATC 5 cut(s) 25, 108, 1025, 1207, 1216
EaeI YGGCCR 2 cut(s) 766, 819
Eam1104I CTCTTC 3 cut(s) 33, 1290, 1379
EarI CTCTTC 3 cut(s) 33, 1290, 1379
Eco130I CCWWGG 1 cut(s) 15
Eco147I AGGCCT 2 cut(s) 20, 720
Eco32I GATATC 1 cut(s) 264
Eco57I CTGAAG 4 cut(s) 278, 288, 370, 1314
Eco81I CCTNAGG 1 cut(s) 48
EcoO109I RGGNCCY 1 cut(s) 1369
EcoRII CCWGG 2 cut(s) 763, 1048
EcoRV GATATC 1 cut(s) 264
EcoT14I CCWWGG 1 cut(s) 15
ErhI CCWWGG 1 cut(s) 15
FaeI CATG 5 cut(s) 64, 232, 820, 871, 1148
FaqI GGGAC 1 cut(s) 428
FatI CATG 5 cut(s) 60, 228, 816, 867, 1144
FauI CCCGC 2 cut(s) 75, 1233
FauNDI CATATG 2 cut(s) 489, 1159
FbaI TGATCA 1 cut(s) 1216
Fnu4HI GCNGC 5 cut(s) 44, 342, 535, 982, 1238
FokI GGATG 4 cut(s) 232, 361, 1190, 1335
Fsp4HI GCNGC 5 cut(s) 44, 342, 535, 982, 1238
GlaI GCGC 1 cut(s) 910
GluI GCNGC 5 cut(s) 44, 342, 535, 982, 1238
GsaI CCCAGC 1 cut(s) 108
GsuI CTGGAG 1 cut(s) 1071
HaeIII GGCC 7 cut(s) 20, 46, 697, 720, 768, 821, 1371
HapII CCGG 1 cut(s) 698
HhaI GCGC 1 cut(s) 911
Hin1II CATG 5 cut(s) 64, 232, 820, 871, 1148
Hin6I GCGC 1 cut(s) 909
HinP1I GCGC 1 cut(s) 909
HinfI GANTC 6 cut(s) 11, 272, 392, 500, 571, 900
HpaII CCGG 1 cut(s) 698
HphI GGTGA 1 cut(s) 818
Hpy166II GTNNAC 1 cut(s) 865
Hpy188I TCNGA 8 cut(s) 25, 268, 389, 561, 582, 1025, 1167, 1294
Hpy188III TCNNGA 5 cut(s) 29, 953, 1004, 1342, 1353
Hpy8I GTNNAC 1 cut(s) 865
HpyAV CCTTC 4 cut(s) 133, 358, 1255, 1321
HpyCH4III ACNGT 2 cut(s) 419, 1079
HpyCH4IV ACGT 1 cut(s) 219
HpyCH4V TGCA 5 cut(s) 537, 936, 1016, 1103, 1237
HpyF10VI GCNNNNNNNGC 5 cut(s) 52, 61, 140, 717, 1109
HpyF3I CTNAG 5 cut(s) 48, 640, 732, 1203, 1351
HpySE526I ACGT 1 cut(s) 219
Hsp92II CATG 5 cut(s) 64, 232, 820, 871, 1148
HspAI GCGC 1 cut(s) 909
Ksp22I TGATCA 1 cut(s) 1216
Kzo9I GATC 5 cut(s) 25, 108, 1025, 1207, 1216
LguI GCTCTTC 1 cut(s) 33
LmnI GCTCC 3 cut(s) 69, 101, 548
Lsp1109I GCAGC 3 cut(s) 353, 521, 1249
LweI GCATC 3 cut(s) 207, 1158, 1168
MaeII ACGT 1 cut(s) 219
MaeIII GTNAC 3 cut(s) 241, 494, 806
MalI GATC 5 cut(s) 27, 110, 1027, 1209, 1218
MbiI CCGCTC 1 cut(s) 43
MboI GATC 5 cut(s) 25, 108, 1025, 1207, 1216
MboII GAAGA 7 cut(s) 50, 199, 271, 281, 376, 1307, 1366
MhlI GDGCHC 1 cut(s) 713
MlsI TGGCCA 2 cut(s) 768, 821
MluCI AATT 7 cut(s) 128, 334, 508, 737, 795, 1106, 1244
MluNI TGGCCA 2 cut(s) 768, 821
MlyI GAGTC 2 cut(s) 5, 894
MmeI TCCRAC 1 cut(s) 732
Mox20I TGGCCA 2 cut(s) 768, 821
MscI TGGCCA 2 cut(s) 768, 821
MseI TTAA 3 cut(s) 477, 759, 1247
MslI CAYNNNNRTG 2 cut(s) 158, 492
Msp20I TGGCCA 2 cut(s) 768, 821
MspA1I CMGCKG 1 cut(s) 1240
MspCI CTTAAG 1 cut(s) 758
MspI CCGG 1 cut(s) 698
MspR9I CCNGG 3 cut(s) 699, 765, 1050
Mva1269I GAATGC 1 cut(s) 1274
MvaI CCWGG 2 cut(s) 765, 1050
MvnI CGCG 1 cut(s) 984
MwoI GCNNNNNNNGC 5 cut(s) 52, 61, 140, 717, 1109
NciI CCSGG 1 cut(s) 699
NdeI CATATG 2 cut(s) 489, 1159
NdeII GATC 5 cut(s) 25, 108, 1025, 1207, 1216
NlaIII CATG 5 cut(s) 64, 232, 820, 871, 1148
NlaIV GGNNCC 2 cut(s) 629, 1370
NmeAIII GCCGAG 1 cut(s) 1138
NmuCI GTSAC 3 cut(s) 241, 494, 806
PceI AGGCCT 2 cut(s) 20, 720
PciSI GCTCTTC 1 cut(s) 33
PcsI WCGNNNNNNNCGW 1 cut(s) 682
PctI GAATGC 1 cut(s) 1274
PfeI GAWTC 4 cut(s) 272, 392, 500, 571
PkrI GCNGC 5 cut(s) 45, 343, 536, 983, 1239
PleI GAGTC 2 cut(s) 5, 894
PpsI GAGTC 2 cut(s) 5, 894
PsiI TTATAA 1 cut(s) 530
Psp6I CCWGG 2 cut(s) 763, 1048
PspFI CCCAGC 1 cut(s) 104
PspGI CCWGG 2 cut(s) 763, 1048
PspN4I GGNNCC 2 cut(s) 629, 1370
PspPI GGNCC 2 cut(s) 695, 1369
PstI CTGCAG 2 cut(s) 1105, 1239
RsaI GTAC 4 cut(s) 377, 826, 1118, 1213
RsaNI GTAC 4 cut(s) 376, 825, 1117, 1212
RseI CAYNNNNRTG 2 cut(s) 158, 492
SapI GCTCTTC 1 cut(s) 33
SaqAI TTAA 3 cut(s) 477, 759, 1247
SatI GCNGC 5 cut(s) 44, 342, 535, 982, 1238
Sau3AI GATC 5 cut(s) 25, 108, 1025, 1207, 1216
Sau96I GGNCC 2 cut(s) 695, 1369
SchI GAGTC 2 cut(s) 5, 894
ScrFI CCNGG 3 cut(s) 699, 765, 1050
SduI GDGCHC 1 cut(s) 713
SfaNI GCATC 3 cut(s) 207, 1158, 1168
SfcI CTRYAG 3 cut(s) 1078, 1101, 1235
SmiMI CAYNNNNRTG 2 cut(s) 158, 492
SmlI CTYRAG 2 cut(s) 722, 758
SmoI CTYRAG 2 cut(s) 722, 758
Sse9I AATT 7 cut(s) 128, 334, 508, 737, 795, 1106, 1244
SseBI AGGCCT 2 cut(s) 20, 720
SsiI CCGC 5 cut(s) 43, 68, 929, 982, 1240
SspI AATATT 1 cut(s) 672
StuI AGGCCT 2 cut(s) 20, 720
StyD4I CCNGG 3 cut(s) 697, 763, 1048
StyI CCWWGG 1 cut(s) 15
TaaI ACNGT 2 cut(s) 419, 1079
TaiI ACGT 1 cut(s) 222
TaqI TCGA 1 cut(s) 915
TaqII GACCGA 2 cut(s) 76, 101
TasI AATT 7 cut(s) 128, 334, 508, 737, 795, 1106, 1244
TatI WGTACW 1 cut(s) 1116
TauI GCSGC 2 cut(s) 46, 984
TfiI GAWTC 4 cut(s) 272, 392, 500, 571
Tru1I TTAA 3 cut(s) 477, 759, 1247
Tru9I TTAA 3 cut(s) 477, 759, 1247
TscAI CASTG 2 cut(s) 127, 1075
TseFI GTSAC 3 cut(s) 241, 494, 806
TseI GCWGC 3 cut(s) 341, 534, 1237
Tsp45I GTSAC 3 cut(s) 241, 494, 806
TspDTI ATGAA 7 cut(s) 157, 207, 217, 368, 1213, 1267, 1366
TspGWI ACGGA 2 cut(s) 1086, 1190
TspRI CASTG 2 cut(s) 127, 1075
Vha464I CTTAAG 1 cut(s) 758
XapI RAATTY 3 cut(s) 334, 737, 1106
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.