MD06G1226700.v1.1

Phosphoethanolamine N-methyltransferase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
Physical Location & Seq
Reverse (-)
35723414 .. 35727104
3691 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1226700.v1.1.491

Sequence Viewer

Length: 1479 bp
ATGGCTGCTTTTGCTAATGGGGAAGAGCGGGAGGTGCAGAAGAACTACTGGGTGGAGCACTCCGCCGATTTGACCGTTGAGGCCATGATGCTCGACTCCAAGGCCTCAGATCTCGACAAGGAAGAACGACCTGAGGTGCTTTCGTTGCTCCCTCCCTATGAGGGCAAATCGGTTGTAGAACTCGGAGCTGGGATTGGTCGTTTCACTGGAGAATTAGCTGAAAAGGCCGGTCAGCTTTTCGCATTGGACTTCATTGACAGTGTGATAAAGAAGAATGAAAGCATTAATGGACACCATAAGAACGTCAAGTTCATGTGCGCTGATGTGACATCACCTGATCTGAAGATTTCTGAAAACTCGGTGGATTTGGTATTCTCAAATTGGCTTCTTATGTATCTGTCAGATACGGAGGTAGAGAATTTGGTGGAAAGGATGATGGGATGGTTGAAGGTCGGTGGACATATCTTTTTCAGAGAATCTTGTTTCCACCAATCTGGAGACTCCAAACGAAAATCCAACCCAACCCATTACAGGGAGCCAAGATTTTATACCAAGGTTTTCAAAGACTGCCACATGCGTGATGATTCCGGGAATTTCTTTGAACTCTCTCTTGTTAGTTGCAAATGTATTGGAGCTTATGTTCGGAACAAAAGGAATCAAAATCAGATCTGCTGGTTATGGCAGAAAGTCCCTTCAGAAAATGATAGAGGGTTCCAGCAGTTCTTAGATAATGTTCAGTATAAAAATACTGGCATACTACGATATGAGCGTGTGTTTGGGCGAGGTTTCGTGAGCACAGGAGGGATCGAAACTACTAAAGAATTTGTGGCAAAGTTGGATCTGAAGCCTGGCCAGAAAGTTCTCGATGTAGGCTGTGGCATCGGGGGAGGTGACTTTTATATGGCCTCAAACTTTGATGTTGAGGTTATTGGAATTGACCTCTCCGTGAATATGATTTCCTTTGCTCTCGAACAAGCTATTGGACTCAAATGCGCTGTCGAGTTTGAAGTTGCTGATTGCACAAAAAAGACTTATCCTGACAATACCTTTGATGTGATATACAGTCGCGACACCATTTTACACATTCAAGACAAGCCTGCATTGTTCCGATCCTTCTACAAGTGGTTGAAGCCAGGCGGCAAAGTTCTCATCAGTGATTACTGTAGGTGTGCTGGAACTCCATCAGAAAACTTTGCTGACTATATTAAGCAAAGAGGATATGATCTCCATGATGTAAAAGCTTATGGTCAGATGCTCAAGGATGCTGGCTTTGATGAGGTCATTGCTGAGGATCGTACTGATCAGTTCAAAGCTGTTTTGGAGCGGGAACTGGCTTCCGTTGAGAAGGATAAGGATTCATTCGTCCAGGACTTTTCTCAAGAGGATTATGATGACATCGTTGGTGGATGGAAGGCAAAGCTGATCAGGGTTGATTCCGGCGAGCAGAAGTGGGGCCTGTTCATTGCCAAGAAGAATTGA

Protein Analysis

493

Amino Acids

55.93

Weight (kDa)

5.3

Isoelectric Point (pI)

29.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_31 PF13847 55 - 178 6e-09 Methyltransferase domain
Methyltransf_PK PF05891 56 - 192 5.1e-08 AdoMet dependent proline di-methyltransferase
Methyltransf_25 PF13649 58 - 153 2.2e-12 Methyltransferase domain
Methyltransf_12 PF08242 59 - 155 1.5e-07 Methyltransferase domain
Methyltransf_11 PF08241 60 - 157 1.2e-12 Methyltransferase domain
Ubie_methyltran PF01209 273 - 390 2.8e-10 ubiE/COQ5 methyltransferase family
CMAS PF02353 273 - 387 1.3e-13 Mycolic acid cyclopropane synthetase
Methyltransf_23 PF13489 277 - 425 3.1e-19 Methyltransferase domain
Methyltransf_31 PF13847 282 - 389 8.8e-22 Methyltransferase domain
Methyltransf_25 PF13649 287 - 380 3.7e-19 Methyltransferase domain
Methyltransf_11 PF08241 288 - 384 1.6e-19 Methyltransferase domain
Methyltransf_12 PF08242 288 - 381 3e-13 Methyltransferase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 2 cut(s) 28, 1324
AccII CGCG 1 cut(s) 1068
AciI CCGC 4 cut(s) 28, 63, 1137, 1324
AclWI GGATC 4 cut(s) 812, 846, 1104, 1299
AcoI YGGCCR 1 cut(s) 850
AcsI RAATTY 3 cut(s) 418, 592, 821
AcuI CTGAAG 3 cut(s) 362, 678, 863
AfaI GTAC 1 cut(s) 1297
AfiI CCNNNNNNNGG 3 cut(s) 161, 531, 532
AgsI TTSAA 7 cut(s) 448, 562, 602, 1007, 1088, 1129, 1309
AjnI CCWGG 3 cut(s) 847, 1132, 1365
AjuI GAANNNNNNNTTGG 2 cut(s) 963, 995
AleI CACNNNNGTG 1 cut(s) 576
AloI GAACNNNNNNTCC 2 cut(s) 624, 656
AluBI AGCT 8 cut(s) 188, 218, 235, 635, 977, 1241, 1313, 1420
AluI AGCT 8 cut(s) 188, 218, 235, 635, 977, 1241, 1313, 1420
Alw21I GWGCWC 2 cut(s) 60, 797
Alw26I GTCTC 1 cut(s) 492
AlwI GGATC 4 cut(s) 812, 846, 1104, 1299
AoxI GGCC 6 cut(s) 81, 102, 225, 850, 903, 1453
ApeKI GCWGC 1 cut(s) 5
ApoI RAATTY 3 cut(s) 418, 592, 821
ArsI GACNNNNNNTTYG 4 cut(s) 981, 1013, 1031, 1063
AseI ATTAAT 1 cut(s) 285
AspLEI GCGC 2 cut(s) 320, 995
AspS9I GGNCC 1 cut(s) 1453
AsuC2I CCSGG 1 cut(s) 589
AsuHPI GGTGA 2 cut(s) 324, 902
AxyI CCTNAGG 1 cut(s) 132
BaeI ACNNNNGTAYC 2 cut(s) 396, 429
BalI TGGCCA 1 cut(s) 852
Bbv12I GWGCWC 2 cut(s) 60, 797
BbvCI CCTCAGC 1 cut(s) 1287
BccI CCATC 4 cut(s) 430, 435, 1189, 1401
BciT130I CCWGG 3 cut(s) 849, 1134, 1367
BclI TGATCA 2 cut(s) 1300, 1422
BcnI CCSGG 1 cut(s) 589
BcoDI GTCTC 1 cut(s) 492
BfmI CTRYAG 1 cut(s) 1162
BglII AGATCT 2 cut(s) 109, 666
BisI GCNGC 2 cut(s) 6, 1138
BlsI GCNGC 2 cut(s) 7, 1139
Bme1390I CCNGG 4 cut(s) 589, 849, 1134, 1367
BmgT120I GGNCC 1 cut(s) 1453
BmiI GGNNCC 3 cut(s) 537, 713, 1454
BmrFI CCNGG 4 cut(s) 589, 849, 1134, 1367
BmrI ACTGGG 1 cut(s) 58
BmsI GCATC 4 cut(s) 78, 888, 1242, 1252
BmuI ACTGGG 1 cut(s) 58
BpmI CTGGAG 2 cut(s) 228, 516
Bpu10I CCTNAGC 1 cut(s) 1287
BpuEI CTTGAG 2 cut(s) 1241, 1362
BpuMI CCSGG 1 cut(s) 589
BsaJI CCNNGG 2 cut(s) 99, 552
BsaXI ACNNNNNCTCC 2 cut(s) 624, 654
Bsc4I CCNNNNNNNGG 3 cut(s) 161, 531, 532
Bse118I RCCGGY 1 cut(s) 227
Bse1I ACTGG 4 cut(s) 53, 211, 754, 1335
Bse21I CCTNAGG 1 cut(s) 132
Bse3DI GCAATG 2 cut(s) 1281, 1461
BseBI CCWGG 3 cut(s) 849, 1134, 1367
BseDI CCNNGG 2 cut(s) 99, 552
BseGI GGATG 4 cut(s) 438, 446, 1267, 1412
BseLI CCNNNNNNNGG 3 cut(s) 161, 531, 532
BseMI GCAATG 2 cut(s) 1281, 1461
BseMII CTCAG 3 cut(s) 120, 123, 1278
BseNI ACTGG 4 cut(s) 53, 211, 754, 1335
BseYI CCCAGC 1 cut(s) 188
BsgI GTGCAG 1 cut(s) 56
Bsh1236I CGCG 1 cut(s) 1068
BshFI GGCC 6 cut(s) 83, 104, 227, 852, 905, 1455
BsiHKAI GWGCWC 2 cut(s) 60, 797
BsiSI CCGG 3 cut(s) 228, 588, 1437
BslFI GGGAC 1 cut(s) 674
BslI CCNNNNNNNGG 3 cut(s) 161, 531, 532
BsmAI GTCTC 1 cut(s) 492
BsmFI GGGAC 1 cut(s) 674
BsnI GGCC 6 cut(s) 83, 104, 227, 852, 905, 1455
Bsp1286I GDGCHC 2 cut(s) 60, 797
Bsp68I TCGCGA 1 cut(s) 1068
BspACI CCGC 4 cut(s) 28, 63, 1137, 1324
BspANI GGCC 6 cut(s) 83, 104, 227, 852, 905, 1455
BspCNI CTCAG 3 cut(s) 119, 124, 1279
BspFNI CGCG 1 cut(s) 1068
BspLI GGNNCC 3 cut(s) 537, 713, 1454
BspPI GGATC 4 cut(s) 812, 846, 1104, 1299
BspQI GCTCTTC 1 cut(s) 18
BsrBI CCGCTC 2 cut(s) 28, 1324
BsrDI GCAATG 2 cut(s) 1281, 1461
BsrFI RCCGGY 1 cut(s) 227
BsrI ACTGG 4 cut(s) 53, 211, 754, 1335
BssAI RCCGGY 1 cut(s) 227
BssECI CCNNGG 2 cut(s) 99, 552
BssT1I CCWWGG 2 cut(s) 99, 552
Bst2UI CCWGG 3 cut(s) 849, 1134, 1367
Bst4CI ACNGT 4 cut(s) 76, 260, 1064, 1163
Bst6I CTCTTC 1 cut(s) 18
BstC8I GCNNGC 3 cut(s) 1098, 1267, 1442
BstDEI CTNAG 4 cut(s) 106, 132, 724, 1287
BstF5I GGATG 4 cut(s) 438, 446, 1267, 1412
BstFNI CGCG 1 cut(s) 1068
BstHHI GCGC 2 cut(s) 320, 995
BstMAI GTCTC 1 cut(s) 492
BstMWI GCNNNNNNNGC 4 cut(s) 11, 34, 145, 224
BstNI CCWGG 3 cut(s) 849, 1134, 1367
BstNSI RCATGY 1 cut(s) 577
BstSCI CCNGG 4 cut(s) 587, 847, 1132, 1365
BstSFI CTRYAG 1 cut(s) 1162
BstUI CGCG 1 cut(s) 1068
BstX2I RGATCY 3 cut(s) 109, 666, 838
BstXI CCANNNNNNTGG 1 cut(s) 494
BstYI RGATCY 3 cut(s) 109, 666, 838
Bsu36I CCTNAGG 1 cut(s) 132
BsuRI GGCC 6 cut(s) 83, 104, 227, 852, 905, 1455
BtsCI GGATG 4 cut(s) 438, 446, 1267, 1412
BtsIMutI CAGTG 3 cut(s) 204, 265, 1159
BtuMI TCGCGA 1 cut(s) 1068
Cac8I GCNNGC 3 cut(s) 1098, 1267, 1442
CfoI GCGC 2 cut(s) 320, 995
Cfr10I RCCGGY 1 cut(s) 227
Cfr13I GGNCC 1 cut(s) 1453
Csp6I GTAC 1 cut(s) 1296
CviAII CATG 4 cut(s) 85, 313, 574, 1229
CviQI GTAC 1 cut(s) 1296
DdeI CTNAG 4 cut(s) 106, 132, 724, 1287
EaeI YGGCCR 1 cut(s) 850
Eam1104I CTCTTC 1 cut(s) 18
EarI CTCTTC 1 cut(s) 18
EciI GGCGGA 1 cut(s) 52
Eco130I CCWWGG 2 cut(s) 99, 552
Eco147I AGGCCT 1 cut(s) 104
Eco57I CTGAAG 3 cut(s) 362, 678, 863
Eco81I CCTNAGG 1 cut(s) 132
EcoO109I RGGNCCY 1 cut(s) 1453
EcoRII CCWGG 3 cut(s) 847, 1132, 1365
EcoT14I CCWWGG 2 cut(s) 99, 552
ErhI CCWWGG 2 cut(s) 99, 552
FaeI CATG 4 cut(s) 88, 316, 577, 1232
FaqI GGGAC 1 cut(s) 674
FatI CATG 4 cut(s) 84, 312, 573, 1228
FauI CCCGC 2 cut(s) 21, 1317
FbaI TGATCA 2 cut(s) 1300, 1422
Fnu4HI GCNGC 2 cut(s) 6, 1138
FokI GGATG 4 cut(s) 445, 453, 1274, 1419
Fsp4HI GCNGC 2 cut(s) 6, 1138
GlaI GCGC 2 cut(s) 319, 994
GluI GCNGC 2 cut(s) 6, 1138
GsaI CCCAGC 1 cut(s) 192
GsuI CTGGAG 2 cut(s) 228, 516
HaeIII GGCC 6 cut(s) 83, 104, 227, 852, 905, 1455
HapII CCGG 3 cut(s) 228, 588, 1437
HhaI GCGC 2 cut(s) 320, 995
Hin1II CATG 4 cut(s) 88, 316, 577, 1232
Hin6I GCGC 2 cut(s) 318, 993
HinP1I GCGC 2 cut(s) 318, 993
HindIII AAGCTT 1 cut(s) 1239
HinfI GANTC 8 cut(s) 95, 476, 500, 584, 655, 984, 1355, 1433
HpaII CCGG 3 cut(s) 228, 588, 1437
HphI GGTGA 2 cut(s) 324, 902
Hpy166II GTNNAC 1 cut(s) 458
Hpy188III TCNNGA 9 cut(s) 113, 495, 790, 863, 968, 1037, 1067, 1088, 1379
Hpy8I GTNNAC 1 cut(s) 458
HpyAV CCTTC 5 cut(s) 442, 702, 1123, 1339, 1405
HpyCH4III ACNGT 4 cut(s) 76, 260, 1064, 1163
HpyCH4IV ACGT 1 cut(s) 303
HpyCH4V TGCA 4 cut(s) 37, 621, 1020, 1100
HpyF10VI GCNNNNNNNGC 4 cut(s) 11, 34, 145, 224
HpyF3I CTNAG 4 cut(s) 106, 132, 724, 1287
HpySE526I ACGT 1 cut(s) 303
Hsp92II CATG 4 cut(s) 88, 316, 577, 1232
HspAI GCGC 2 cut(s) 318, 993
Ksp22I TGATCA 2 cut(s) 1300, 1422
LguI GCTCTTC 1 cut(s) 18
LmnI GCTCC 6 cut(s) 55, 153, 185, 535, 632, 1321
LweI GCATC 4 cut(s) 78, 888, 1242, 1252
MaeII ACGT 1 cut(s) 303
MaeIII GTNAC 2 cut(s) 325, 890
MbiI CCGCTC 2 cut(s) 28, 1324
MboII GAAGA 5 cut(s) 35, 52, 134, 283, 355
MflI RGATCY 3 cut(s) 109, 666, 838
MhlI GDGCHC 2 cut(s) 60, 797
MlsI TGGCCA 1 cut(s) 852
MluCI AATT 7 cut(s) 212, 379, 418, 592, 821, 933, 1474
MluNI TGGCCA 1 cut(s) 852
MlyI GAGTC 3 cut(s) 89, 494, 978
MmeI TCCRAC 2 cut(s) 540, 816
Mox20I TGGCCA 1 cut(s) 852
MscI TGGCCA 1 cut(s) 852
MseI TTAA 2 cut(s) 285, 1206
MslI CAYNNNNRTG 1 cut(s) 576
Msp20I TGGCCA 1 cut(s) 852
MspI CCGG 3 cut(s) 228, 588, 1437
MspR9I CCNGG 4 cut(s) 589, 849, 1134, 1367
MvaI CCWGG 3 cut(s) 849, 1134, 1367
MvnI CGCG 1 cut(s) 1068
MwoI GCNNNNNNNGC 4 cut(s) 11, 34, 145, 224
NciI CCSGG 1 cut(s) 589
NlaIII CATG 4 cut(s) 88, 316, 577, 1232
NlaIV GGNNCC 3 cut(s) 537, 713, 1454
NmuCI GTSAC 2 cut(s) 325, 890
NruI TCGCGA 1 cut(s) 1068
NspI RCATGY 1 cut(s) 577
OliI CACNNNNGTG 1 cut(s) 576
PceI AGGCCT 1 cut(s) 104
PciSI GCTCTTC 1 cut(s) 18
PcsI WCGNNNNNNNCGW 1 cut(s) 766
PfeI GAWTC 5 cut(s) 476, 584, 655, 1355, 1433
PfoI TCCNGGA 2 cut(s) 587, 1365
PkrI GCNGC 2 cut(s) 7, 1139
PleI GAGTC 3 cut(s) 89, 494, 978
PpsI GAGTC 3 cut(s) 89, 494, 978
PshBI ATTAAT 1 cut(s) 285
Psp6I CCWGG 3 cut(s) 847, 1132, 1365
PspFI CCCAGC 1 cut(s) 188
PspGI CCWGG 3 cut(s) 847, 1132, 1365
PspN4I GGNNCC 3 cut(s) 537, 713, 1454
PspPI GGNCC 1 cut(s) 1453
PsuI RGATCY 3 cut(s) 109, 666, 838
RruI TCGCGA 1 cut(s) 1068
RsaI GTAC 1 cut(s) 1297
RsaNI GTAC 1 cut(s) 1296
RseI CAYNNNNRTG 1 cut(s) 576
SapI GCTCTTC 1 cut(s) 18
SaqAI TTAA 2 cut(s) 285, 1206
SatI GCNGC 2 cut(s) 6, 1138
Sau96I GGNCC 1 cut(s) 1453
SchI GAGTC 3 cut(s) 89, 494, 978
ScrFI CCNGG 4 cut(s) 589, 849, 1134, 1367
SduI GDGCHC 2 cut(s) 60, 797
SfaNI GCATC 4 cut(s) 78, 888, 1242, 1252
SfcI CTRYAG 1 cut(s) 1162
SmiMI CAYNNNNRTG 1 cut(s) 576
SmlI CTYRAG 2 cut(s) 1256, 1377
SmoI CTYRAG 2 cut(s) 1256, 1377
Sse9I AATT 7 cut(s) 212, 379, 418, 592, 821, 933, 1474
SseBI AGGCCT 1 cut(s) 104
SsiI CCGC 4 cut(s) 28, 63, 1137, 1324
StuI AGGCCT 1 cut(s) 104
StyD4I CCNGG 4 cut(s) 587, 847, 1132, 1365
StyI CCWWGG 2 cut(s) 99, 552
TaaI ACNGT 4 cut(s) 76, 260, 1064, 1163
TaiI ACGT 1 cut(s) 306
TaqI TCGA 6 cut(s) 93, 114, 807, 864, 969, 999
TasI AATT 7 cut(s) 212, 379, 418, 592, 821, 933, 1474
TauI GCSGC 1 cut(s) 1140
TfiI GAWTC 5 cut(s) 476, 584, 655, 1355, 1433
Tru1I TTAA 2 cut(s) 285, 1206
Tru9I TTAA 2 cut(s) 285, 1206
TscAI CASTG 3 cut(s) 211, 265, 1159
TseFI GTSAC 2 cut(s) 325, 890
TseI GCWGC 1 cut(s) 5
Tsp45I GTSAC 2 cut(s) 325, 890
TspDTI ATGAA 5 cut(s) 241, 291, 301, 1347, 1450
TspGWI ACGGA 3 cut(s) 422, 934, 1327
TspRI CASTG 3 cut(s) 211, 265, 1159
VspI ATTAAT 1 cut(s) 285
XapI RAATTY 3 cut(s) 418, 592, 821
XceI RCATGY 1 cut(s) 577
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.