Protein ALWAYS EARLY
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G21430 AT3G21430 AT3G21430 |
| fragaria_vesca | FvH4_4g17660 FvH4_4g17660 FvH4_4g17660 FvH4_4g17660 |
| malus_domestica | MD16G1172500.v1.1 MD16G1172600.v1.1 |
| prunus_persica | Prupe.1G139300_v2.0.a1 Prupe.1G139300_v2.0.a1 Prupe.1G139300_v2.0.a1 Prupe.1G139300_v2.0.a1 Prupe.1G139300_v2.0.a1 Prupe.1G139300_v2.0.a1 Prupe.1G139300_v2.0.a1 Prupe.1G139300_v2.0.a1 Prupe.1G139300_v2.0.a1 |
| pyrus_communis | pycom16g14470 |
| rosa_chinensis | RchiOBHm_Chr4g0421601 |
| rosa_laevigata | RLG00000007665 RLG00000008391 |
| rosa_multiflora | Rmu_ssc0000097.1_g000002 |
| rosa_roxburghii | Rroxscaffold_5G00363850 |
| rosa_rugosa | Rorug04G0173300 Rorug04G0173400 Rorug04G0173500 Rorug04G0173600 Rorug04G0173700 |
| rosa_samantha | Rh4AG233400 Rh4BG236300 Rh4CG248000 Rh4DG232200 |
| rosa_wichuraiana | Rw4G020070 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2415 |
| AasI | GACNNNNNNGTC | 3 cut(s) | 456, 2150, 3182 |
| Acc36I | ACCTGC | 2 cut(s) | 2740, 3186 |
| Acc65I | GGTACC | 1 cut(s) | 2175 |
| AccB1I | GGYRCC | 2 cut(s) | 4, 2175 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1177 |
| AccI | GTMKAC | 1 cut(s) | 2949 |
| AccII | CGCG | 2 cut(s) | 1917, 2587 |
| AccIII | TCCGGA | 1 cut(s) | 283 |
| AciI | CCGC | 5 cut(s) | 178, 469, 844, 884, 1551 |
| AclWI | GGATC | 5 cut(s) | 336, 1283, 1887, 3070, 3102 |
| AcoI | YGGCCR | 1 cut(s) | 3088 |
| AcsI | RAATTY | 6 cut(s) | 182, 564, 1058, 1091, 1746, 2213 |
| AcuI | CTGAAG | 2 cut(s) | 530, 891 |
| AcyI | GRCGYC | 1 cut(s) | 5 |
| AdeI | CACNNNGTG | 2 cut(s) | 3086, 3263 |
| AfeI | AGCGCT | 2 cut(s) | 161, 413 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 446, 589, 860, 1040, 1177, 2011, 2204 |
| AflIII | ACRYGT | 2 cut(s) | 123, 2585 |
| AgsI | TTSAA | 8 cut(s) | 389, 1064, 1090, 1110, 1235, 1922, 1981, 2463 |
| AjnI | CCWGG | 4 cut(s) | 2544, 2793, 3090, 3273 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1948, 1980 |
| Alw21I | GWGCWC | 1 cut(s) | 1798 |
| Alw26I | GTCTC | 6 cut(s) | 282, 511, 521, 1405, 1748, 2378 |
| AlwI | GGATC | 5 cut(s) | 336, 1283, 1887, 3070, 3102 |
| Ama87I | CYCGRG | 1 cut(s) | 1373 |
| Aor13HI | TCCGGA | 1 cut(s) | 283 |
| Aor51HI | AGCGCT | 2 cut(s) | 161, 413 |
| AoxI | GGCC | 6 cut(s) | 246, 307, 2079, 2084, 2389, 3088 |
| ApeKI | GCWGC | 5 cut(s) | 946, 1347, 1469, 2714, 3312 |
| ApoI | RAATTY | 6 cut(s) | 182, 564, 1058, 1091, 1746, 2213 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1449, 2064 |
| Asp718I | GGTACC | 1 cut(s) | 2175 |
| AspLEI | GCGC | 5 cut(s) | 7, 162, 414, 1046, 2593 |
| AspS9I | GGNCC | 4 cut(s) | 131, 483, 1548, 2080 |
| AsuC2I | CCSGG | 1 cut(s) | 2083 |
| AsuHPI | GGTGA | 3 cut(s) | 606, 788, 1526 |
| AsuII | TTCGAA | 1 cut(s) | 1561 |
| AvaI | CYCGRG | 1 cut(s) | 1373 |
| AvaII | GGWCC | 3 cut(s) | 131, 483, 1548 |
| AxyI | CCTNAGG | 1 cut(s) | 490 |
| BalI | TGGCCA | 1 cut(s) | 3090 |
| BanI | GGYRCC | 2 cut(s) | 4, 2175 |
| BauI | CACGAG | 2 cut(s) | 45, 537 |
| BbsI | GAAGAC | 3 cut(s) | 1155, 2874, 3095 |
| Bbv12I | GWGCWC | 1 cut(s) | 1798 |
| BbvCI | CCTCAGC | 2 cut(s) | 693, 1239 |
| BbvI | GCAGC | 5 cut(s) | 958, 1359, 1456, 2726, 3299 |
| BccI | CCATC | 6 cut(s) | 511, 1654, 1797, 2400, 2657, 2843 |
| BceAI | ACGGC | 5 cut(s) | 210, 920, 1360, 1430, 2161 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1170, 1204 |
| BciT130I | CCWGG | 4 cut(s) | 2546, 2795, 3092, 3275 |
| BciVI | GTATCC | 3 cut(s) | 167, 586, 2218 |
| BclI | TGATCA | 2 cut(s) | 1597, 2164 |
| BcnI | CCSGG | 1 cut(s) | 2083 |
| BcoDI | GTCTC | 6 cut(s) | 282, 511, 521, 1405, 1748, 2378 |
| BfmI | CTRYAG | 8 cut(s) | 231, 444, 967, 1012, 1140, 1758, 1825, 2170 |
| BfoI | RGCGCY | 4 cut(s) | 8, 163, 415, 1047 |
| BfuAI | ACCTGC | 2 cut(s) | 2740, 3186 |
| BfuI | GTATCC | 3 cut(s) | 167, 586, 2218 |
| BglII | AGATCT | 1 cut(s) | 1183 |
| BisI | GCNGC | 5 cut(s) | 947, 1348, 1470, 2715, 3313 |
| BlpI | GCTNAGC | 1 cut(s) | 2732 |
| BlsI | GCNGC | 5 cut(s) | 948, 1349, 1471, 2716, 3314 |
| Bme1390I | CCNGG | 5 cut(s) | 2083, 2546, 2795, 3092, 3275 |
| Bme18I | GGWCC | 3 cut(s) | 131, 483, 1548 |
| BmeT110I | CYCGRG | 1 cut(s) | 1373 |
| BmgT120I | GGNCC | 4 cut(s) | 131, 483, 1548, 2080 |
| BmiI | GGNNCC | 3 cut(s) | 6, 2177, 2844 |
| BmrFI | CCNGG | 5 cut(s) | 2083, 2546, 2795, 3092, 3275 |
| BmsI | GCATC | 8 cut(s) | 305, 988, 1153, 1188, 1304, 2128, 2276, 2888 |
| BpiI | GAAGAC | 3 cut(s) | 1155, 2874, 3095 |
| BpmI | CTGGAG | 2 cut(s) | 915, 1275 |
| Bpu10I | CCTNAGC | 5 cut(s) | 408, 693, 859, 1039, 1239 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2732 |
| Bpu14I | TTCGAA | 1 cut(s) | 1561 |
| BpuEI | CTTGAG | 5 cut(s) | 605, 2440, 2460, 2512, 2794 |
| BpuMI | CCSGG | 1 cut(s) | 2083 |
| BsaBI | GATNNNNATC | 1 cut(s) | 610 |
| BsaHI | GRCGYC | 1 cut(s) | 5 |
| BsaJI | CCNNGG | 5 cut(s) | 395, 936, 1844, 1955, 3273 |
| BsaWI | WCCGGW | 2 cut(s) | 283, 2178 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1105, 1135, 1792, 1822 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 446, 589, 860, 1040, 1177, 2011, 2204 |
| Bse21I | CCTNAGG | 1 cut(s) | 490 |
| Bse3DI | GCAATG | 5 cut(s) | 324, 1357, 1774, 2155, 3218 |
| Bse8I | GATNNNNATC | 1 cut(s) | 610 |
| BseAI | TCCGGA | 1 cut(s) | 283 |
| BseBI | CCWGG | 4 cut(s) | 2546, 2795, 3092, 3275 |
| BseDI | CCNNGG | 5 cut(s) | 395, 936, 1844, 1955, 3273 |
| BseGI | GGATG | 4 cut(s) | 436, 652, 1295, 2119 |
| BseJI | GATNNNNATC | 1 cut(s) | 610 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 446, 589, 860, 1040, 1177, 2011, 2204 |
| BseMI | GCAATG | 5 cut(s) | 324, 1357, 1774, 2155, 3218 |
| BseRI | GAGGAG | 4 cut(s) | 54, 478, 988, 2336 |
| BseXI | GCAGC | 5 cut(s) | 958, 1359, 1456, 2726, 3299 |
| Bsh1236I | CGCG | 2 cut(s) | 1917, 2587 |
| BshFI | GGCC | 6 cut(s) | 248, 309, 2081, 2086, 2391, 3090 |
| BshNI | GGYRCC | 2 cut(s) | 4, 2175 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1798 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1373 |
| BsiSI | CCGG | 4 cut(s) | 284, 1292, 2083, 2179 |
| BslFI | GGGAC | 4 cut(s) | 1297, 2027, 3170, 3187 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 446, 589, 860, 1040, 1177, 2011, 2204 |
| BsmAI | GTCTC | 6 cut(s) | 282, 511, 521, 1405, 1748, 2378 |
| BsmBI | CGTCTC | 2 cut(s) | 511, 1405 |
| BsmFI | GGGAC | 4 cut(s) | 1297, 2027, 3170, 3187 |
| BsmI | GAATGC | 2 cut(s) | 789, 2237 |
| BsnI | GGCC | 6 cut(s) | 248, 309, 2081, 2086, 2391, 3090 |
| BsoBI | CYCGRG | 1 cut(s) | 1373 |
| Bsp119I | TTCGAA | 1 cut(s) | 1561 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1798 |
| Bsp13I | TCCGGA | 1 cut(s) | 283 |
| Bsp1407I | TGTACA | 3 cut(s) | 217, 2959, 3239 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2732 |
| Bsp19I | CCATGG | 1 cut(s) | 1844 |
| BspACI | CCGC | 5 cut(s) | 178, 469, 844, 884, 1551 |
| BspANI | GGCC | 6 cut(s) | 248, 309, 2081, 2086, 2391, 3090 |
| BspEI | TCCGGA | 1 cut(s) | 283 |
| BspFNI | CGCG | 2 cut(s) | 1917, 2587 |
| BspHI | TCATGA | 2 cut(s) | 1594, 2140 |
| BspLI | GGNNCC | 3 cut(s) | 6, 2177, 2844 |
| BspMAI | CTGCAG | 3 cut(s) | 235, 1016, 1144 |
| BspMI | ACCTGC | 2 cut(s) | 2740, 3186 |
| BspPI | GGATC | 5 cut(s) | 336, 1283, 1887, 3070, 3102 |
| BspT104I | TTCGAA | 1 cut(s) | 1561 |
| BspT107I | GGYRCC | 2 cut(s) | 4, 2175 |
| BsrDI | GCAATG | 5 cut(s) | 324, 1357, 1774, 2155, 3218 |
| BsrGI | TGTACA | 3 cut(s) | 217, 2959, 3239 |
| BssECI | CCNNGG | 5 cut(s) | 395, 936, 1844, 1955, 3273 |
| BssNAI | GTATAC | 1 cut(s) | 2950 |
| BssNI | GRCGYC | 1 cut(s) | 5 |
| BssSI | CACGAG | 2 cut(s) | 45, 537 |
| BssT1I | CCWWGG | 2 cut(s) | 1844, 1955 |
| Bst1107I | GTATAC | 1 cut(s) | 2950 |
| Bst2BI | CACGAG | 2 cut(s) | 45, 537 |
| Bst2UI | CCWGG | 4 cut(s) | 2546, 2795, 3092, 3275 |
| Bst4CI | ACNGT | 6 cut(s) | 362, 1548, 1829, 1974, 2161, 2171 |
| Bst6I | CTCTTC | 4 cut(s) | 101, 144, 285, 509 |
| BstACI | GRCGYC | 1 cut(s) | 5 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1163 |
| BstAUI | TGTACA | 3 cut(s) | 217, 2959, 3239 |
| BstBI | TTCGAA | 1 cut(s) | 1561 |
| BstDSI | CCRYGG | 2 cut(s) | 936, 1844 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 587, 2202 |
| BstF5I | GGATG | 4 cut(s) | 436, 652, 1295, 2119 |
| BstFNI | CGCG | 2 cut(s) | 1917, 2587 |
| BstH2I | RGCGCY | 4 cut(s) | 8, 163, 415, 1047 |
| BstHHI | GCGC | 5 cut(s) | 7, 162, 414, 1046, 2593 |
| BstMAI | GTCTC | 6 cut(s) | 282, 511, 521, 1405, 1748, 2378 |
| BstNI | CCWGG | 4 cut(s) | 2546, 2795, 3092, 3275 |
| BstNSI | RCATGY | 5 cut(s) | 127, 1161, 2239, 2263, 2356 |
| BstSCI | CCNGG | 5 cut(s) | 2081, 2544, 2793, 3090, 3273 |
| BstSFI | CTRYAG | 8 cut(s) | 231, 444, 967, 1012, 1140, 1758, 1825, 2170 |
| BstUI | CGCG | 2 cut(s) | 1917, 2587 |
| BstV1I | GCAGC | 5 cut(s) | 958, 1359, 1456, 2726, 3299 |
| BstV2I | GAAGAC | 3 cut(s) | 1155, 2874, 3095 |
| BstX2I | RGATCY | 1 cut(s) | 1183 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 832 |
| BstYI | RGATCY | 1 cut(s) | 1183 |
| BstZ17I | GTATAC | 1 cut(s) | 2950 |
| Bsu36I | CCTNAGG | 1 cut(s) | 490 |
| BsuI | GTATCC | 3 cut(s) | 167, 586, 2218 |
| BsuRI | GGCC | 6 cut(s) | 248, 309, 2081, 2086, 2391, 3090 |
| BtgI | CCRYGG | 2 cut(s) | 936, 1844 |
| BtgZI | GCGATG | 2 cut(s) | 489, 2253 |
| BtsCI | GGATG | 4 cut(s) | 436, 652, 1295, 2119 |
| BtsI | GCAGTG | 3 cut(s) | 291, 1021, 3297 |
| BveI | ACCTGC | 2 cut(s) | 2740, 3186 |
| CciI | TCATGA | 2 cut(s) | 1594, 2140 |
| CfoI | GCGC | 5 cut(s) | 7, 162, 414, 1046, 2593 |
| Cfr13I | GGNCC | 4 cut(s) | 131, 483, 1548, 2080 |
| CpoI | CGGWCCG | 1 cut(s) | 1548 |
| CseI | GACGC | 2 cut(s) | 2832, 3089 |
| CspI | CGGWCCG | 1 cut(s) | 1548 |
| DinI | GGCGCC | 1 cut(s) | 6 |
| DraI | TTTAAA | 2 cut(s) | 633, 1279 |
| DraIII | CACNNNGTG | 2 cut(s) | 3086, 3263 |
| DrdI | GACNNNNNNGTC | 3 cut(s) | 456, 2150, 3182 |
| DseDI | GACNNNNNNGTC | 3 cut(s) | 456, 2150, 3182 |
| EaeI | YGGCCR | 1 cut(s) | 3088 |
| Eam1104I | CTCTTC | 4 cut(s) | 101, 144, 285, 509 |
| EarI | CTCTTC | 4 cut(s) | 101, 144, 285, 509 |
| Eco130I | CCWWGG | 2 cut(s) | 1844, 1955 |
| Eco147I | AGGCCT | 1 cut(s) | 248 |
| Eco32I | GATATC | 2 cut(s) | 2366, 2452 |
| Eco47I | GGWCC | 3 cut(s) | 131, 483, 1548 |
| Eco47III | AGCGCT | 2 cut(s) | 161, 413 |
| Eco57I | CTGAAG | 2 cut(s) | 530, 891 |
| Eco81I | CCTNAGG | 1 cut(s) | 490 |
| Eco88I | CYCGRG | 1 cut(s) | 1373 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 587, 2202 |
| EcoO109I | RGGNCCY | 2 cut(s) | 131, 483 |
| EcoRI | GAATTC | 1 cut(s) | 564 |
| EcoRII | CCWGG | 4 cut(s) | 2544, 2793, 3090, 3273 |
| EcoRV | GATATC | 2 cut(s) | 2366, 2452 |
| EcoT14I | CCWWGG | 2 cut(s) | 1844, 1955 |
| EcoT22I | ATGCAT | 4 cut(s) | 2237, 2334, 2633, 2881 |
| EgeI | GGCGCC | 1 cut(s) | 6 |
| EheI | GGCGCC | 1 cut(s) | 6 |
| ErhI | CCWWGG | 2 cut(s) | 1844, 1955 |
| Esp3I | CGTCTC | 2 cut(s) | 511, 1405 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 257, 289, 1381, 1413, 1449, 1481 |
| FaqI | GGGAC | 4 cut(s) | 1297, 2027, 3170, 3187 |
| FbaI | TGATCA | 2 cut(s) | 1597, 2164 |
| FblI | GTMKAC | 1 cut(s) | 2949 |
| Fnu4HI | GCNGC | 5 cut(s) | 947, 1348, 1470, 2715, 3313 |
| FokI | GGATG | 4 cut(s) | 423, 659, 1282, 2106 |
| Fsp4HI | GCNGC | 5 cut(s) | 947, 1348, 1470, 2715, 3313 |
| GlaI | GCGC | 5 cut(s) | 6, 161, 413, 1045, 2592 |
| GluI | GCNGC | 5 cut(s) | 947, 1348, 1470, 2715, 3313 |
| GsuI | CTGGAG | 2 cut(s) | 915, 1275 |
| HaeII | RGCGCY | 4 cut(s) | 8, 163, 415, 1047 |
| HaeIII | GGCC | 6 cut(s) | 248, 309, 2081, 2086, 2391, 3090 |
| HapII | CCGG | 4 cut(s) | 284, 1292, 2083, 2179 |
| HgaI | GACGC | 2 cut(s) | 2832, 3089 |
| HhaI | GCGC | 5 cut(s) | 7, 162, 414, 1046, 2593 |
| Hin1I | GRCGYC | 1 cut(s) | 5 |
| Hin6I | GCGC | 5 cut(s) | 5, 160, 412, 1044, 2591 |
| HinP1I | GCGC | 5 cut(s) | 5, 160, 412, 1044, 2591 |
| HincII | GTYRAC | 2 cut(s) | 1675, 2859 |
| HindII | GTYRAC | 2 cut(s) | 1675, 2859 |
| HindIII | AAGCTT | 4 cut(s) | 815, 856, 1036, 1260 |
| HpaI | GTTAAC | 1 cut(s) | 1675 |
| HpaII | CCGG | 4 cut(s) | 284, 1292, 2083, 2179 |
| HphI | GGTGA | 3 cut(s) | 606, 788, 1526 |
| Hpy166II | GTNNAC | 6 cut(s) | 851, 1544, 1675, 2859, 2950, 3302 |
| Hpy8I | GTNNAC | 6 cut(s) | 851, 1544, 1675, 2859, 2950, 3302 |
| Hpy99I | CGWCG | 2 cut(s) | 2642, 2918 |
| HpyCH4III | ACNGT | 6 cut(s) | 362, 1548, 1829, 1974, 2161, 2171 |
| HpyCH4IV | ACGT | 1 cut(s) | 520 |
| HpySE526I | ACGT | 1 cut(s) | 520 |
| Hsp92I | GRCGYC | 1 cut(s) | 5 |
| HspAI | GCGC | 5 cut(s) | 5, 160, 412, 1044, 2591 |
| KasI | GGCGCC | 1 cut(s) | 4 |
| Kpn2I | TCCGGA | 1 cut(s) | 283 |
| KpnI | GGTACC | 1 cut(s) | 2179 |
| Ksp22I | TGATCA | 2 cut(s) | 1597, 2164 |
| KspAI | GTTAAC | 1 cut(s) | 1675 |
| LmnI | GCTCC | 6 cut(s) | 141, 1051, 1648, 1695, 2605, 2620 |
| Lsp1109I | GCAGC | 5 cut(s) | 958, 1359, 1456, 2726, 3299 |
| LweI | GCATC | 8 cut(s) | 305, 988, 1153, 1188, 1304, 2128, 2276, 2888 |
| MaeII | ACGT | 1 cut(s) | 520 |
| MaeIII | GTNAC | 5 cut(s) | 356, 1361, 1613, 1711, 2973 |
| MfeI | CAATTG | 2 cut(s) | 1833, 2507 |
| MflI | RGATCY | 1 cut(s) | 1183 |
| MhlI | GDGCHC | 1 cut(s) | 1798 |
| MlsI | TGGCCA | 1 cut(s) | 3090 |
| MluI | ACGCGT | 1 cut(s) | 2585 |
| MluNI | TGGCCA | 1 cut(s) | 3090 |
| Mly113I | GGCGCC | 1 cut(s) | 5 |
| MlyI | GAGTC | 6 cut(s) | 550, 1232, 1646, 2009, 2115, 3278 |
| MmeI | TCCRAC | 2 cut(s) | 99, 526 |
| Mox20I | TGGCCA | 1 cut(s) | 3090 |
| Mph1103I | ATGCAT | 4 cut(s) | 2237, 2334, 2633, 2881 |
| MroI | TCCGGA | 1 cut(s) | 283 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1449, 2064 |
| MscI | TGGCCA | 1 cut(s) | 3090 |
| MslI | CAYNNNNRTG | 5 cut(s) | 830, 1801, 2034, 2051, 2673 |
| Msp20I | TGGCCA | 1 cut(s) | 3090 |
| MspA1I | CMGCKG | 1 cut(s) | 846 |
| MspI | CCGG | 4 cut(s) | 284, 1292, 2083, 2179 |
| MspR9I | CCNGG | 5 cut(s) | 2083, 2546, 2795, 3092, 3275 |
| MunI | CAATTG | 2 cut(s) | 1833, 2507 |
| Mva1269I | GAATGC | 2 cut(s) | 789, 2237 |
| MvaI | CCWGG | 4 cut(s) | 2546, 2795, 3092, 3275 |
| MvnI | CGCG | 2 cut(s) | 1917, 2587 |
| NarI | GGCGCC | 1 cut(s) | 5 |
| NciI | CCSGG | 1 cut(s) | 2083 |
| NcoI | CCATGG | 1 cut(s) | 1844 |
| NlaIV | GGNNCC | 3 cut(s) | 6, 2177, 2844 |
| NmeAIII | GCCGAG | 1 cut(s) | 3266 |
| NmuCI | GTSAC | 1 cut(s) | 356 |
| NsiI | ATGCAT | 4 cut(s) | 2237, 2334, 2633, 2881 |
| NspI | RCATGY | 5 cut(s) | 127, 1161, 2239, 2263, 2356 |
| NspV | TTCGAA | 1 cut(s) | 1561 |
| PaeI | GCATGC | 2 cut(s) | 2239, 2356 |
| PaeR7I | CTCGAG | 1 cut(s) | 1373 |
| PagI | TCATGA | 2 cut(s) | 1594, 2140 |
| PceI | AGGCCT | 1 cut(s) | 248 |
| PciI | ACATGT | 1 cut(s) | 123 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 3293 |
| PctI | GAATGC | 2 cut(s) | 789, 2237 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1449, 2064 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1177 |
| PkrI | GCNGC | 5 cut(s) | 948, 1349, 1471, 2716, 3314 |
| PleI | GAGTC | 6 cut(s) | 550, 1231, 1645, 2009, 2114, 3278 |
| PluTI | GGCGCC | 1 cut(s) | 8 |
| PpsI | GAGTC | 6 cut(s) | 550, 1231, 1645, 2009, 2114, 3278 |
| PpuMI | RGGWCCY | 2 cut(s) | 131, 483 |
| PscI | ACATGT | 1 cut(s) | 123 |
| PsiI | TTATAA | 1 cut(s) | 2415 |
| Psp5II | RGGWCCY | 2 cut(s) | 131, 483 |
| Psp6I | CCWGG | 4 cut(s) | 2544, 2793, 3090, 3273 |
| PspGI | CCWGG | 4 cut(s) | 2544, 2793, 3090, 3273 |
| PspN4I | GGNNCC | 3 cut(s) | 6, 2177, 2844 |
| PspPI | GGNCC | 4 cut(s) | 131, 483, 1548, 2080 |
| PspPPI | RGGWCCY | 2 cut(s) | 131, 483 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 3261, 3293 |
| PstI | CTGCAG | 3 cut(s) | 235, 1016, 1144 |
| PsuI | RGATCY | 1 cut(s) | 1183 |
| RseI | CAYNNNNRTG | 5 cut(s) | 830, 1801, 2034, 2051, 2673 |
| Rsr2I | CGGWCCG | 1 cut(s) | 1548 |
| RsrII | CGGWCCG | 1 cut(s) | 1548 |
| SatI | GCNGC | 5 cut(s) | 947, 1348, 1470, 2715, 3313 |
| Sau96I | GGNCC | 4 cut(s) | 131, 483, 1548, 2080 |
| SchI | GAGTC | 6 cut(s) | 550, 1232, 1646, 2009, 2115, 3278 |
| ScrFI | CCNGG | 5 cut(s) | 2083, 2546, 2795, 3092, 3275 |
| SduI | GDGCHC | 1 cut(s) | 1798 |
| SfaNI | GCATC | 8 cut(s) | 305, 988, 1153, 1188, 1304, 2128, 2276, 2888 |
| SfcI | CTRYAG | 8 cut(s) | 231, 444, 967, 1012, 1140, 1758, 1825, 2170 |
| SfoI | GGCGCC | 1 cut(s) | 6 |
| Sfr274I | CTCGAG | 1 cut(s) | 1373 |
| SfuI | TTCGAA | 1 cut(s) | 1561 |
| SinI | GGWCC | 3 cut(s) | 131, 483, 1548 |
| SlaI | CTCGAG | 1 cut(s) | 1373 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 830, 1801, 2034, 2051, 2673 |
| SmlI | CTYRAG | 7 cut(s) | 10, 584, 1373, 2455, 2475, 2527, 2773 |
| SmoI | CTYRAG | 7 cut(s) | 10, 584, 1373, 2455, 2475, 2527, 2773 |
| SphI | GCATGC | 2 cut(s) | 2239, 2356 |
| SseBI | AGGCCT | 1 cut(s) | 248 |
| SsiI | CCGC | 5 cut(s) | 178, 469, 844, 884, 1551 |
| SspDI | GGCGCC | 1 cut(s) | 4 |
| StuI | AGGCCT | 1 cut(s) | 248 |
| StyD4I | CCNGG | 5 cut(s) | 2081, 2544, 2793, 3090, 3273 |
| StyI | CCWWGG | 2 cut(s) | 1844, 1955 |
| TaaI | ACNGT | 6 cut(s) | 362, 1548, 1829, 1974, 2161, 2171 |
| TaiI | ACGT | 1 cut(s) | 523 |
| TaqI | TCGA | 3 cut(s) | 1374, 1561, 2916 |
| TatI | WGTACW | 4 cut(s) | 30, 217, 2959, 3239 |
| TseFI | GTSAC | 1 cut(s) | 356 |
| TseI | GCWGC | 5 cut(s) | 946, 1347, 1469, 2714, 3312 |
| Tsp45I | GTSAC | 1 cut(s) | 356 |
| TspGWI | ACGGA | 5 cut(s) | 118, 341, 1813, 2496, 2953 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1177 |
| VpaK11BI | GGWCC | 3 cut(s) | 131, 483, 1548 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 587, 2202 |
| XapI | RAATTY | 6 cut(s) | 182, 564, 1058, 1091, 1746, 2213 |
| XbaI | TCTAGA | 4 cut(s) | 416, 2251, 2924, 3280 |
| XceI | RCATGY | 5 cut(s) | 127, 1161, 2239, 2263, 2356 |
| XhoI | CTCGAG | 1 cut(s) | 1373 |
| XmiI | GTMKAC | 1 cut(s) | 2949 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1449, 2064 |
| Zsp2I | ATGCAT | 4 cut(s) | 2237, 2334, 2633, 2881 |