Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0007674

Physical Location & Seq

Genomic Coordinates Reverse (-)

9251093 .. 9255083

Gene Structure 3991 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G25500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3156 bp

ATGCTCTTCTTCTTATTCTTCTTCTACTTACTCTTATCTTCATCCTCCGATCTAGTCTTCGCCGACCGTCGTGTACTCCACGAACCATTCTTCCCTATAGATTCACCACCACCGTCACCACCATCACCACCACCACTTCCTAAACTACCATTCTCTTCAACCACTCCTCCATCTTCATCAGACCCAAATGCTTCTCCTTTCTTCCCTTTATACCCTTCATCTCCACCACCACCTTCTCCAGCCTCCTTCGCTTCTTTTCCGGCGAATATCTCATCTCTAATCGTCCCTCACGCCACTAAATCCCCACCTAACTCCAAAAAACTCCTTATCGTCGCTATCTCCGCCGTTTCCTCCGCTGCTTTAGTCGCTCTACTTATCGCTTTACTCTATTGGCGAAGAAGCAAACGTAACCAAGATCTTAACTTCTCCGATGATAGCAAAACATACACCACCGACAGTAGCCGCCGTGTCTACCCTCCTCCTCCGGCAACGGCGCCTCCAACACGACGCAATGCGGAGGCTAGAAGTAAACAGAGGACCACCACGAGCTCCACCAATAACAACAGCTCTGAGTTTCTTTACTTAGGAACAATGGTGAATCAAAGAGGAATCGATGAACAATCTCTTAGTAATAATGGATCAAGCTCAAGAAAACTTGAATCTCCAGATCTTCAACCACTTCCTCCATTGATGAAACGAAGTTTCCGTTTAAATCCAGATGTTGGTTCAATCGGAGAAGAAGATGAAGAAGATGAGTTTTACTCTCCACGTGGCTCACAAAGCGGGCGAGAACCGTTAAACCGGGTCGGACTTCCGGGTCAAAATCCTAGATCTGTTAACAATGACACTATCTCTTGCTCATCTTCAAGCTCTGGTTCACCAGGAAGATCAACATTTATCAGTATCTCTCCTTCAATGAGTCCTAAGAGATCTGAACCAAAACCGCCGGTTATCTCCACACCAGAACCGGCGGAGTTAACCGATTATAGATTTGTTCGGTCTCCGTCACTGTCGTTAGCTTCTTTATCGTCGGGATTGAAAAACTCCGATGAAGTAGGATTGAATCAAATCTTTAGATCTCCGACGGTTACATCTCTAACAACTTCACCGGAGAATAACAAAAAAGAGAACTCTCCATTATCATCTACTTCAACTTCACCGGAACGACGACCAAATGATACACCAGAAGCTTACTTGAGATCTCCGTCGCATTCTTCTGCTTCTACATCACCGTATAGATGTTTTCAGAAATCTCCGGAGGTCTTACCGGCGTTTATGAGTAATCTCCGGCAAGGTTTGCAATCTCAGTTACTATCTTCTCCTTCTAACTCTCATGGAGGACAAGGTTTCCTTAAGCAGTTAGATGCATTACGTTCTCGTTCACCGTCGTCGTCTTCTTCTTCTGTTTGTTCTTCACCGGAGAAAGCTTCTCATAAGTCACCAGTTACATCTCCTAAGTTATCTTCCCGGAATTCGCAGTCTCTATCATCTTCTCCGGATAGAGATTTTAGTCATAGCTTAGATGTATCACCACGGATATCGAACATTTCACCTCAAATTTTACAGTCTCGTGTGCCTCCGCCTCCTCCTCCTCCCCCACCGTTGCCGTTGTGGGGACGACGGAGTCAGGTGACTACTAAAGCGGACACAATCTCGAGACCGCCTTCTCTTACACCGCCTTCACATCCTTTTGTGATCCCATCTGAAAACTTACCAGTGACTTCGTCTCCTATGGAGACTCCAGAGACGGTTTGTGCGAGTGAGGCGGCGGAGGAAACTCCGAAACCGAAGCTAAAGGCGTTACATTGGGATAAAGTTAGAGCAAGTTCGGATCGTGAGATGGTTTGGGATCATCTTCGATCAAGCTCTTTCAAATTAGATGAGGAGATGATTGAGACGTTGTTTGTGGCGAAGTCGTTAAACAACAAACCAAATCAGAGTCAGACAACTCCAAGATGTGTTCTCCCGAGCCCGAACCAAGAGAACAGAGTCCTGGACCCGAAGAAGGCTCAGAATATTGCCATCTTGCTTCGTGCACTTAATGTCACTATAGAAGAAGTTTGTGAGGCTCTTCTTGAAGGCAATGCTGATACACTGGGGACTGAACTTCTTGAGAGCTTACTGAAGATGGCACCGACAAAAGAAGAAGAGCGCAAGTTGAAAGCGTACAATGATGATTCGCCTGTTAAGCTTGGACATGCTGAGAAATTCCTTAAGGCAATGTTGGACATCCCTTTCGCCTTTAAAAGAGTTGATGCAATGCTCTATGTAGCCAACTTTGAGTCCGAGGTTGAATACTTGAAGAAATCTTTTGAGACTCTTGAGGCTGCTTGTGAAGAACTGAGGAACAGTAGGATGTTCTTAAAGCTTCTTGAAGCGGTTCTAAAGACAGGAAACCGTATGAACGTTGGAACAAACCGAGGAGATGCACATGCGTTCAAGCTTGATACACTTCTCAAGCTAGTCGATGTCAAAGGCGCTGATGGGAAAACAACTCTCTTGCATTTCGTTGTACAAGAGATAATCCGAGCAGAAGGCACACGTCTCTCAGGTAACAATACACAAACAGATGACATTAAATGCCGGAAACTAGGTCTCCAAGTTGTATCAAGTCTCTGTTCTGAGCTTAGTAACGTCAAGAAAGCTGCTGCGATGGACTCAGAAGTACTAAGCAGCTACGTCTCCAAGCTTTCTCAAGGCATTGCCAAGATCAACGAAGCAATCCAAGTCCAATCAACAATCACAGAAGAAAGCAACAGTCAGAGGTTTTCGGAATCGATGAAAACGTTTCTGAAAAGAGCTGAGGAAGAGATCATCAGAGTACAAGCTCAAGAGAGCGTAGCGTTATCACTTGTAAAAGAAATCACAGAGTATTTCCATGGAAACTCGGCTAAAGAAGAAGCGCATCCGTTTAGAATATTCTTGGTGGTTAGAGACTTCCTTGGAGTAGTAGACAGAGTTTGCAAAGAAGTAGGGATGATAAACGAAAGAACAATGGTTAGTTCTGCTCATAAGTTTCCTGTTCCAGTGAATCCAATGATGCCACAACCTCTTCCTGGACTCGTTGGACGAAGACAATCTTCTTCTTCTTCGTCGTCGTCTTCAACCTCTTCGTCTGATGAAGACGAACATAACTCAATCTCATTAGTTTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003779 GO:0005488 GO:0005515 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0006996 GO:0007010 GO:0007015 GO:0008064 GO:0008092 GO:0008150 GO:0009987 GO:0010638 GO:0010639 GO:0016020 GO:0016043 GO:0030029 GO:0030036 GO:0030312 GO:0030832 GO:0030833 GO:0030834 GO:0030835 GO:0030837 GO:0030838 GO:0031333 GO:0031334 GO:0032271 GO:0032272 GO:0032273 GO:0032535 GO:0032956 GO:0032970 GO:0033043 GO:0043242 GO:0043244 GO:0043254 GO:0044087 GO:0044089 GO:0044464 GO:0044877 GO:0045010 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051015 GO:0051016 GO:0051128 GO:0051129 GO:0051130 GO:0051493 GO:0051494 GO:0051495 GO:0051693 GO:0065007 GO:0065008 GO:0071840 GO:0071944 GO:0090066 GO:0097435 GO:0110053 GO:1901879 GO:1901880 GO:1902903 GO:1902904 GO:1902905

KEGG Pathways

Metabolic & Signaling

ko04320 map04320

Pfam Domains

Protein Families

FH2

Protein Analysis

1051

Amino Acids

115.15

Weight (kDa)

8.55

Isoelectric Point (pI)

74.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FH2	PF02181	591 - 983	8.8e-123	Formin Homology 2 Domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007674)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G25500
fragaria_vesca	FvH4_2g17360 FvH4_2g17360 FvH4_2g17360
malus_domestica	MD05G1152500.v1.1 MD10G1147000.v1.1
prunus_persica	Prupe.8G185400_v2.0.a1
pyrus_communis	pycom05g14690 pycom10g12670
rosa_chinensis	RchiOBHm_Chr6g0281991
rosa_laevigata	RLG00000012921
rosa_multiflora	Rmu_sc0000569.1_g000001 Rmu_sc0001255.1_g000001 Rmu_sc0011823.1_g000001
rosa_roxburghii	Rroxscaffold_7G00186650
rosa_rugosa	Rorug06G0144700
rosa_samantha	Rh4CG162200 Rh4CG270300 Rh6AG257900 Rh6BG260900 Rh6CG259800 Rh6DG252200 Rh7AG416400
rosa_wichuraiana	Rw6G022300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	816, 1623
AccB1I	GGYRCC	2 cut(s)	493, 2131
AccB7I	CCANNNNNTGG	1 cut(s)	722
AccI	GTMKAC	2 cut(s)	471, 2952
AccIII	TCCGGA	2 cut(s)	1255, 1495
AclI	AACGTT	2 cut(s)	2406, 2786
AclWI	GGATC	4 cut(s)	646, 1690, 1839, 1857
AcsI	RAATTY	3 cut(s)	1471, 1557, 2207
AcuI	CTGAAG	1 cut(s)	2144
AcvI	CACGTG	1 cut(s)	770
AcyI	GRCGYC	1 cut(s)	494
AfaI	GTAC	5 cut(s)	75, 2168, 2514, 2667, 2823
AfiI	CCNNNNNNNGG	4 cut(s)	722, 1613, 2005, 3056
AflII	CTTAAG	2 cut(s)	1352, 2213
AflIII	ACRYGT	1 cut(s)	2540
AjiI	CACGTC	1 cut(s)	2543
AjnI	CCWGG	3 cut(s)	880, 1992, 3055
AloI	GAACNNNNNNTCC	2 cut(s)	75, 107
Alw21I	GWGCWC	2 cut(s)	551, 2038
Alw44I	GTGCAC	1 cut(s)	2034
AlwI	GGATC	4 cut(s)	646, 1690, 1839, 1857
Ama87I	CYCGRG	2 cut(s)	1654, 1966
Aor13HI	TCCGGA	2 cut(s)	1255, 1495
ApaLI	GTGCAC	1 cut(s)	2034
ApeKI	GCWGC	5 cut(s)	356, 2327, 2645, 2648, 2673
ApoI	RAATTY	3 cut(s)	1471, 1557, 2207
ArsI	GACNNNNNNTTYG	2 cut(s)	2219, 2251
Asp700I	GAANNNNTTC	1 cut(s)	2379
AspLEI	GCGC	4 cut(s)	496, 2154, 2480, 2905
AspS9I	GGNCC	2 cut(s)	537, 1996
AsuC2I	CCSGG	3 cut(s)	803, 816, 1468
AvaI	CYCGRG	2 cut(s)	1654, 1966
AvaII	GGWCC	2 cut(s)	537, 1996
BaeGI	GKGCMC	1 cut(s)	2038
BanI	GGYRCC	2 cut(s)	493, 2131
BanII	GRGCYC	2 cut(s)	551, 1973
BarI	GAAGNNNNNNTAC	2 cut(s)	895, 927
BauI	CACGAG	2 cut(s)	544, 1569
BbrPI	CACGTG	1 cut(s)	770
BbsI	GAAGAC	5 cut(s)	49, 1386, 3079, 3093, 3129
Bbv12I	GWGCWC	2 cut(s)	551, 2038
BbvCI	CCTCAGC	1 cut(s)	2802
BbvI	GCAGC	5 cut(s)	343, 2314, 2632, 2635, 2685
BccI	CCATC	8 cut(s)	130, 178, 1708, 1834, 2030, 2122, 2477, 2647
BceAI	ACGGC	4 cut(s)	329, 450, 507, 1591
BciT130I	CCWGG	3 cut(s)	882, 1994, 3057
BcnI	CCSGG	3 cut(s)	803, 816, 1468
BfaI	CTAG	5 cut(s)	53, 522, 828, 2462, 2591
BfmI	CTRYAG	2 cut(s)	96, 2049
BfoI	RGCGCY	2 cut(s)	497, 2481
BfrI	CTTAAG	2 cut(s)	1352, 2213
BglII	AGATCT	6 cut(s)	415, 667, 830, 929, 1076, 1199
BisI	GCNGC	7 cut(s)	357, 463, 1767, 2328, 2646, 2649, 2674
BlsI	GCNGC	7 cut(s)	358, 464, 1768, 2329, 2647, 2650, 2675
BmcAI	AGTACT	1 cut(s)	2667
Bme1390I	CCNGG	6 cut(s)	803, 816, 882, 1468, 1994, 3057
Bme18I	GGWCC	2 cut(s)	537, 1996
BmeT110I	CYCGRG	2 cut(s)	1654, 1966
BmgBI	CACGTC	1 cut(s)	2543
BmgT120I	GGNCC	2 cut(s)	537, 1996
BmiI	GGNNCC	3 cut(s)	495, 1998, 2133
BmrFI	CCNGG	6 cut(s)	803, 816, 882, 1468, 1994, 3057
BmrI	ACTGGG	1 cut(s)	2105
BmsI	GCATC	5 cut(s)	1354, 2245, 2416, 2914, 3030
BmuI	ACTGGG	1 cut(s)	2105
BpiI	GAAGAC	5 cut(s)	49, 1386, 3079, 3093, 3129
BplI	GAGNNNNNCTC	2 cut(s)	746, 778
BpmI	CTGGAG	3 cut(s)	222, 648, 1725
Bpu10I	CCTNAGC	1 cut(s)	2802
BpuEI	CTTGAG	7 cut(s)	631, 1216, 2132, 2342, 2441, 2679, 2814
BpuMI	CCSGG	3 cut(s)	803, 816, 1468
Bsa29I	ATCGAT	2 cut(s)	612, 2777
BsaAI	YACGTR	1 cut(s)	770
BsaHI	GRCGYC	1 cut(s)	494
BsaI	GGTCTC	3 cut(s)	1005, 1651, 2600
BsaJI	CCNNGG	5 cut(s)	1532, 2286, 2419, 2878, 2941
BsaWI	WCCGGW	5 cut(s)	1108, 1159, 1255, 1417, 1495
BsaXI	ACNNNNNCTCC	8 cut(s)	151, 181, 481, 511, 1711, 1741, 2580, 2610
Bsc4I	CCNNNNNNNGG	4 cut(s)	722, 1613, 2005, 3056
Bse118I	RCCGGY	3 cut(s)	946, 967, 1267
Bse1I	ACTGG	4 cut(s)	1442, 1715, 2100, 3026
Bse3DI	GCAATG	5 cut(s)	517, 2089, 2226, 2265, 2700
BseAI	TCCGGA	2 cut(s)	1255, 1495
BseBI	CCWGG	3 cut(s)	882, 1994, 3057
BseCI	ATCGAT	2 cut(s)	612, 2777
BseDI	CCNNGG	5 cut(s)	1532, 2286, 2419, 2878, 2941
BseGI	GGATG	6 cut(s)	41, 1684, 2229, 2361, 2905, 2982
BseLI	CCNNNNNNNGG	4 cut(s)	722, 1613, 2005, 3056
BseMI	GCAATG	5 cut(s)	517, 2089, 2226, 2265, 2700
BseMII	CTCAG	9 cut(s)	561, 1319, 2024, 2193, 2333, 2562, 2613, 2673, 2793
BseNI	ACTGG	4 cut(s)	1442, 1715, 2100, 3026
BseRI	GAGGAG	8 cut(s)	156, 468, 471, 1575, 1578, 1581, 1898, 2436
BseSI	GKGCMC	1 cut(s)	2038
BseXI	GCAGC	5 cut(s)	343, 2314, 2632, 2635, 2685
Bsh1285I	CGRYCG	1 cut(s)	67
BshNI	GGYRCC	2 cut(s)	493, 2131
BshVI	ATCGAT	2 cut(s)	612, 2777
BsiEI	CGRYCG	1 cut(s)	67
BsiHKAI	GWGCWC	2 cut(s)	551, 2038
BsiHKCI	CYCGRG	2 cut(s)	1654, 1966
BslFI	GGGAC	3 cut(s)	269, 1629, 2113
BslI	CCNNNNNNNGG	4 cut(s)	722, 1613, 2005, 3056
BsmBI	CGTCTC	5 cut(s)	1731, 1739, 1889, 2549, 2686
BsmFI	GGGAC	3 cut(s)	269, 1629, 2113
BsmI	GAATGC	1 cut(s)	1210
Bso31I	GGTCTC	3 cut(s)	1005, 1651, 2600
BsoBI	CYCGRG	2 cut(s)	1654, 1966
Bsp1286I	GDGCHC	3 cut(s)	551, 1973, 2038
Bsp13I	TCCGGA	2 cut(s)	1255, 1495
Bsp1407I	TGTACA	1 cut(s)	2512
Bsp19I	CCATGG	1 cut(s)	2878
BspCNI	CTCAG	9 cut(s)	562, 1318, 2023, 2194, 2334, 2561, 2614, 2672, 2794
BspDI	ATCGAT	2 cut(s)	612, 2777
BspEI	TCCGGA	2 cut(s)	1255, 1495
BspLI	GGNNCC	3 cut(s)	495, 1998, 2133
BspPI	GGATC	4 cut(s)	646, 1690, 1839, 1857
BspQI	GCTCTTC	3 cut(s)	11, 2076, 2142
BspT107I	GGYRCC	2 cut(s)	493, 2131
BspTI	CTTAAG	2 cut(s)	1352, 2213
BspTNI	GGTCTC	3 cut(s)	1005, 1651, 2600
BsrDI	GCAATG	5 cut(s)	517, 2089, 2226, 2265, 2700
BsrFI	RCCGGY	3 cut(s)	946, 967, 1267
BsrGI	TGTACA	1 cut(s)	2512
BsrI	ACTGG	4 cut(s)	1442, 1715, 2100, 3026
BssAI	RCCGGY	3 cut(s)	946, 967, 1267
BssECI	CCNNGG	5 cut(s)	1532, 2286, 2419, 2878, 2941
BssNI	GRCGYC	1 cut(s)	494
BssSI	CACGAG	2 cut(s)	544, 1569
BssT1I	CCWWGG	2 cut(s)	2878, 2941
Bst2BI	CACGAG	2 cut(s)	544, 1569
Bst2UI	CCWGG	3 cut(s)	882, 1994, 3057
Bst6I	CTCTTC	7 cut(s)	11, 160, 2076, 2142, 2802, 3057, 3115
BstACI	GRCGYC	1 cut(s)	494
BstAFI	CTTAAG	2 cut(s)	1352, 2213
BstAPI	GCANNNNNTGC	1 cut(s)	1297
BstAUI	TGTACA	1 cut(s)	2512
BstBAI	YACGTR	1 cut(s)	770
BstC8I	GCNNGC	1 cut(s)	785
BstDSI	CCRYGG	2 cut(s)	1532, 2878
BstF5I	GGATG	6 cut(s)	41, 1684, 2229, 2361, 2905, 2982
BstH2I	RGCGCY	2 cut(s)	497, 2481
BstHHI	GCGC	4 cut(s)	496, 2154, 2480, 2905
BstMCI	CGRYCG	1 cut(s)	67
BstMWI	GCNNNNNNNGC	7 cut(s)	248, 341, 365, 780, 1297, 1763, 2188
BstNI	CCWGG	3 cut(s)	882, 1994, 3057
BstNSI	RCATGY	2 cut(s)	2201, 2435
BstSCI	CCNGG	6 cut(s)	801, 814, 880, 1466, 1992, 3055
BstSFI	CTRYAG	2 cut(s)	96, 2049
BstSLI	GKGCMC	1 cut(s)	2038
BstV1I	GCAGC	5 cut(s)	343, 2314, 2632, 2635, 2685
BstV2I	GAAGAC	5 cut(s)	49, 1386, 3079, 3093, 3129
BstX2I	RGATCY	6 cut(s)	415, 667, 830, 929, 1076, 1199
BstYI	RGATCY	6 cut(s)	415, 667, 830, 929, 1076, 1199
Bsu15I	ATCGAT	2 cut(s)	612, 2777
BsuTUI	ATCGAT	2 cut(s)	612, 2777
BtgI	CCRYGG	2 cut(s)	1532, 2878
BtgZI	GCGATG	1 cut(s)	2666
BtrI	CACGTC	1 cut(s)	2543
BtsCI	GGATG	6 cut(s)	41, 1684, 2229, 2361, 2905, 2982
BtsIMutI	CAGTG	4 cut(s)	1007, 1722, 2093, 3033
Cac8I	GCNNGC	1 cut(s)	785
CfoI	GCGC	4 cut(s)	496, 2154, 2480, 2905
Cfr10I	RCCGGY	3 cut(s)	946, 967, 1267
Cfr13I	GGNCC	2 cut(s)	537, 1996
ClaI	ATCGAT	2 cut(s)	612, 2777
CseI	GACGC	1 cut(s)	516
Csp6I	GTAC	5 cut(s)	74, 2167, 2513, 2666, 2822
CviAII	CATG	4 cut(s)	1334, 2198, 2432, 2879
CviQI	GTAC	5 cut(s)	74, 2167, 2513, 2666, 2822
DinI	GGCGCC	1 cut(s)	495
DraI	TTTAAA	2 cut(s)	711, 2245
DrdI	GACNNNNNNGTC	2 cut(s)	816, 1623
DseDI	GACNNNNNNGTC	2 cut(s)	816, 1623
Eam1104I	CTCTTC	7 cut(s)	11, 160, 2076, 2142, 2802, 3057, 3115
EarI	CTCTTC	7 cut(s)	11, 160, 2076, 2142, 2802, 3057, 3115
EciI	GGCGGA	4 cut(s)	331, 986, 1569, 1784
Ecl136II	GAGCTC	1 cut(s)	549
Eco130I	CCWWGG	2 cut(s)	2878, 2941
Eco24I	GRGCYC	2 cut(s)	551, 1973
Eco31I	GGTCTC	3 cut(s)	1005, 1651, 2600
Eco32I	GATATC	1 cut(s)	1539
Eco47I	GGWCC	2 cut(s)	537, 1996
Eco53kI	GAGCTC	1 cut(s)	549
Eco57I	CTGAAG	1 cut(s)	2144
Eco72I	CACGTG	1 cut(s)	770
Eco88I	CYCGRG	2 cut(s)	1654, 1966
EcoICRI	GAGCTC	1 cut(s)	549
EcoRI	GAATTC	1 cut(s)	1471
EcoRII	CCWGG	3 cut(s)	880, 1992, 3055
EcoRV	GATATC	1 cut(s)	1539
EcoT14I	CCWWGG	2 cut(s)	2878, 2941
EcoT22I	ATGCAT	1 cut(s)	1369
EcoT38I	GRGCYC	2 cut(s)	551, 1973
EgeI	GGCGCC	1 cut(s)	495
EheI	GGCGCC	1 cut(s)	495
ErhI	CCWWGG	2 cut(s)	2878, 2941
Esp3I	CGTCTC	5 cut(s)	1731, 1739, 1889, 2549, 2686
FaeI	CATG	4 cut(s)	1337, 2201, 2435, 2882
FalI	AAGNNNNNCTT	4 cut(s)	1335, 1367, 3064, 3096
FaqI	GGGAC	3 cut(s)	269, 1629, 2113
FatI	CATG	4 cut(s)	1333, 2197, 2431, 2878
FauI	CCCGC	1 cut(s)	776
FblI	GTMKAC	2 cut(s)	471, 2952
Fnu4HI	GCNGC	7 cut(s)	357, 463, 1767, 2328, 2646, 2649, 2674
FokI	GGATG	6 cut(s)	28, 1671, 2216, 2368, 2892, 2989
FriOI	GRGCYC	2 cut(s)	551, 1973
Fsp4HI	GCNGC	7 cut(s)	357, 463, 1767, 2328, 2646, 2649, 2674
FspBI	CTAG	5 cut(s)	53, 522, 828, 2462, 2591
GlaI	GCGC	4 cut(s)	495, 2153, 2479, 2904
GluI	GCNGC	7 cut(s)	357, 463, 1767, 2328, 2646, 2649, 2674
GsuI	CTGGAG	3 cut(s)	222, 648, 1725
HaeII	RGCGCY	2 cut(s)	497, 2481
HgaI	GACGC	1 cut(s)	516
HhaI	GCGC	4 cut(s)	496, 2154, 2480, 2905
Hin1I	GRCGYC	1 cut(s)	494
Hin1II	CATG	4 cut(s)	1337, 2201, 2435, 2882
Hin6I	GCGC	4 cut(s)	494, 2152, 2478, 2903
HinP1I	GCGC	4 cut(s)	494, 2152, 2478, 2903
HincII	GTYRAC	2 cut(s)	838, 978
HindII	GTYRAC	2 cut(s)	838, 978
HindIII	AAGCTT	6 cut(s)	1188, 1425, 2189, 2366, 2441, 2687
HpaI	GTTAAC	2 cut(s)	838, 978
Hpy166II	GTNNAC	9 cut(s)	74, 472, 530, 838, 878, 978, 1382, 2036, 2953
Hpy8I	GTNNAC	9 cut(s)	74, 472, 530, 838, 878, 978, 1382, 2036, 2953
HpyCH4IV	ACGT	9 cut(s)	406, 769, 1372, 1898, 2406, 2542, 2634, 2679, 2786
HpyCH4V	TGCA	7 cut(s)	1300, 1367, 2036, 2258, 2429, 2503, 2964
HpyF10VI	GCNNNNNNNGC	7 cut(s)	248, 341, 365, 780, 1297, 1763, 2188
HpySE526I	ACGT	9 cut(s)	406, 769, 1372, 1898, 2406, 2542, 2634, 2679, 2786
Hsp92I	GRCGYC	1 cut(s)	494
Hsp92II	CATG	4 cut(s)	1337, 2201, 2435, 2882
HspAI	GCGC	4 cut(s)	494, 2152, 2478, 2903
KasI	GGCGCC	1 cut(s)	493
Kpn2I	TCCGGA	2 cut(s)	1255, 1495
KspAI	GTTAAC	2 cut(s)	838, 978
LguI	GCTCTTC	3 cut(s)	11, 2076, 2142
LmnI	GCTCC	1 cut(s)	554
Lsp1109I	GCAGC	5 cut(s)	343, 2314, 2632, 2635, 2685
LweI	GCATC	5 cut(s)	1354, 2245, 2416, 2914, 3030
MaeI	CTAG	5 cut(s)	53, 522, 828, 2462, 2591
MaeII	ACGT	9 cut(s)	406, 769, 1372, 1898, 2406, 2542, 2634, 2679, 2786
MflI	RGATCY	6 cut(s)	415, 667, 830, 929, 1076, 1199
MhlI	GDGCHC	3 cut(s)	551, 1973, 2038
MluCI	AATT	4 cut(s)	1471, 1557, 1874, 2207
Mly113I	GGCGCC	1 cut(s)	494
MlyI	GAGTC	9 cut(s)	928, 1633, 1732, 1948, 1998, 2291, 2311, 2651, 3054
MmeI	TCCRAC	6 cut(s)	524, 787, 1106, 2205, 2389, 3046
Mph1103I	ATGCAT	1 cut(s)	1369
MroI	TCCGGA	2 cut(s)	1255, 1495
MroXI	GAANNNNTTC	1 cut(s)	2379
MspA1I	CMGCKG	1 cut(s)	356
MspCI	CTTAAG	2 cut(s)	1352, 2213
MspR9I	CCNGG	6 cut(s)	803, 816, 882, 1468, 1994, 3057
Mva1269I	GAATGC	1 cut(s)	1210
MvaI	CCWGG	3 cut(s)	882, 1994, 3057
MwoI	GCNNNNNNNGC	7 cut(s)	248, 341, 365, 780, 1297, 1763, 2188
NarI	GGCGCC	1 cut(s)	494
NciI	CCSGG	3 cut(s)	803, 816, 1468
NcoI	CCATGG	1 cut(s)	2878
NlaIII	CATG	4 cut(s)	1337, 2201, 2435, 2882
NlaIV	GGNNCC	3 cut(s)	495, 1998, 2133
NmeAIII	GCCGAG	1 cut(s)	2867
NmuCI	GTSAC	6 cut(s)	114, 1005, 1437, 1630, 1717, 2044
NsiI	ATGCAT	1 cut(s)	1369
NspI	RCATGY	2 cut(s)	2201, 2435
PaeR7I	CTCGAG	1 cut(s)	1654
PciSI	GCTCTTC	3 cut(s)	11, 2076, 2142
PcsI	WCGNNNNNNNCGW	3 cut(s)	703, 1754, 2783
PctI	GAATGC	1 cut(s)	1210
PdmI	GAANNNNTTC	1 cut(s)	2379
PfeI	GAWTC	8 cut(s)	101, 598, 609, 659, 1063, 2177, 2774, 3031
PflFI	GACNNNGTC	2 cut(s)	1623, 1723
PflMI	CCANNNNNTGG	1 cut(s)	722
PfoI	TCCNGGA	3 cut(s)	1466, 1992, 3055
PkrI	GCNGC	7 cut(s)	358, 464, 1768, 2329, 2647, 2650, 2675
PleI	GAGTC	9 cut(s)	927, 1632, 1732, 1947, 1997, 2290, 2311, 2651, 3054
PluTI	GGCGCC	1 cut(s)	497
PmaCI	CACGTG	1 cut(s)	770
PmlI	CACGTG	1 cut(s)	770
PpsI	GAGTC	9 cut(s)	927, 1632, 1732, 1947, 1997, 2290, 2311, 2651, 3054
Ppu21I	YACGTR	1 cut(s)	770
Psp124BI	GAGCTC	1 cut(s)	551
Psp1406I	AACGTT	2 cut(s)	2406, 2786
Psp6I	CCWGG	3 cut(s)	880, 1992, 3055
PspCI	CACGTG	1 cut(s)	770
PspGI	CCWGG	3 cut(s)	880, 1992, 3055
PspN4I	GGNNCC	3 cut(s)	495, 1998, 2133
PspPI	GGNCC	2 cut(s)	537, 1996
PsuI	RGATCY	6 cut(s)	415, 667, 830, 929, 1076, 1199
PsyI	GACNNNGTC	2 cut(s)	1623, 1723
RsaI	GTAC	5 cut(s)	75, 2168, 2514, 2667, 2823
RsaNI	GTAC	5 cut(s)	74, 2167, 2513, 2666, 2822
SacI	GAGCTC	1 cut(s)	551
SapI	GCTCTTC	3 cut(s)	11, 2076, 2142
SatI	GCNGC	7 cut(s)	357, 463, 1767, 2328, 2646, 2649, 2674
Sau96I	GGNCC	2 cut(s)	537, 1996
ScaI	AGTACT	1 cut(s)	2667
SchI	GAGTC	9 cut(s)	928, 1633, 1732, 1948, 1998, 2291, 2311, 2651, 3054
ScrFI	CCNGG	6 cut(s)	803, 816, 882, 1468, 1994, 3057
SduI	GDGCHC	3 cut(s)	551, 1973, 2038
SfaNI	GCATC	5 cut(s)	1354, 2245, 2416, 2914, 3030
SfcI	CTRYAG	2 cut(s)	96, 2049
SfoI	GGCGCC	1 cut(s)	495
Sfr274I	CTCGAG	1 cut(s)	1654
SinI	GGWCC	2 cut(s)	537, 1996
SlaI	CTCGAG	1 cut(s)	1654
Sse9I	AATT	4 cut(s)	1471, 1557, 1874, 2207
SspDI	GGCGCC	1 cut(s)	493
SspI	AATATT	2 cut(s)	2017, 2919
SspMI	CTAG	5 cut(s)	53, 522, 828, 2462, 2591
SstI	GAGCTC	1 cut(s)	551
StyD4I	CCNGG	6 cut(s)	801, 814, 880, 1466, 1992, 3055
StyI	CCWWGG	2 cut(s)	2878, 2941
TaiI	ACGT	9 cut(s)	409, 772, 1375, 1901, 2409, 2545, 2637, 2682, 2789
TaqI	TCGA	6 cut(s)	612, 1541, 1655, 1858, 2466, 2777
TaqII	GACCGA	1 cut(s)	987
TasI	AATT	4 cut(s)	1471, 1557, 1874, 2207
TatI	WGTACW	4 cut(s)	73, 2512, 2665, 2821
TauI	GCSGC	2 cut(s)	465, 1769
TfiI	GAWTC	8 cut(s)	101, 598, 609, 659, 1063, 2177, 2774, 3031
TscAI	CASTG	4 cut(s)	1014, 1722, 2100, 3033
TseFI	GTSAC	6 cut(s)	114, 1005, 1437, 1630, 1717, 2044
TseI	GCWGC	5 cut(s)	356, 2327, 2645, 2648, 2673
Tsp45I	GTSAC	6 cut(s)	114, 1005, 1437, 1630, 1717, 2044
TspGWI	ACGGA	6 cut(s)	695, 993, 1194, 1549, 1636, 2898
TspRI	CASTG	4 cut(s)	1014, 1722, 2100, 3033
Tth111I	GACNNNGTC	2 cut(s)	1623, 1723
Van91I	CCANNNNNTGG	1 cut(s)	722
Vha464I	CTTAAG	2 cut(s)	1352, 2213
VneI	GTGCAC	1 cut(s)	2034
VpaK11BI	GGWCC	2 cut(s)	537, 1996
XapI	RAATTY	3 cut(s)	1471, 1557, 2207
XceI	RCATGY	2 cut(s)	2201, 2435
XhoI	CTCGAG	1 cut(s)	1654
XmiI	GTMKAC	2 cut(s)	471, 2952
XmnI	GAANNNNTTC	1 cut(s)	2379
XspI	CTAG	5 cut(s)	53, 522, 828, 2462, 2591
ZrmI	AGTACT	1 cut(s)	2667
Zsp2I	ATGCAT	1 cut(s)	1369

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.