Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0007674

Physical Location & Seq

Genomic Coordinates Reverse (-)

23876149 .. 23879994

Gene Structure 3846 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000012921

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3360 bp

ATGCCCTCCTCCTCTTTCTTCTTCCTCTTGCTCTTCCTATTCTGCGCACTACCCTTTGTAGCCCCTAACCGGAGGATCCTCCACCAGCCGCTTTTACCCCAAGATTCTCATCCTCCTGCTCAGCCTCCGGCTCCGTCTCCGCCTTCTCTGCCTCCCAACCCGAATCCCAAGTACCCATTTTCAACTTCCAATTCTACCCCTTCAGATTCTCCCTTTTTCCCAACCTACCCCGCCCCGCCTCCTCCTCCCTCTTCCCCGGCCACATTCGCCTCCTTCCCGGCCAACATCTCCTCCCTCATTCTCCCCCAGGCACCTGCCTCCAACTCCAAATCCCACAAGCTCGTTGCCCTCGCCGTCTGCGCCGCCATCTCCGCCTTCGTCGCCGTCGCCTCCGCCGTCTTCGTCCTCTGCCGTCGCCGGCGCAACAACAACCGCAACTTCCCCGATGAGGACGACAAGACCTACAGATCCGAGCAGAGCAACCGCTTCTTTCAGGCCAGCAATGCTCGCTCCAGCAGCGGGACCCACAAGCTCCGGACCGGCTCCTCCACCAGCTCCGAGTTCCTCTACCTCGGCACCGTCGTCAACTCCCGCGGAATCGACGAGCGCGTGAGCTCACGCGGCGGCGCCGGCGCCGGCGGCGCGTTGGAGACCCGGAAGGTCGACTCGCCGGACCTCCAGCCGCTCCCGCCTCTGTCCCGGCAGTGCTCCAAGCTGAGTAATTGCACCAATGCTGAACCGGCCGAACCGGCTCGGACCGGAGACGAGGAAGAGGAGGAGGAAGAAGAGTTTTACTCGCCGAGAGGATCTTCCGGTTACCGTGAAAGCTTCAATGGAGTTGGATCGGGGTCTCGGAGGCTATTCGCCGCAGTGGTGGCCGGCGATCTCGAGCAAAGAATCAGCGAAACGACGTCGTGCTCGTGCTCGTCTTCAAATTCCGGTTCACCGGCCCGGTCACACTCTATCAGTCTTTCTCCGGCGGTCAGTGTAAGTCCGAGAAGACCATCACTACCCAAATCTCCCGAGTCTTCTGTTATGCAGCCACTGCCTTCACAGCCACCGCCAGCTGAGCCTCATTATCCGACGCCGTTTGGTTTCGACACGGTGTCTCGTTCCCCATCTTCGTCGCCGCCGGTGAGACTACTGGAGAATATTCCGGAATCCTCGCCGAGAAGGTCGAGGGTTTCGCAGCAGAATCTGCGGTCTCCTTCGTTGAGTCCAATGTCTTCGCCGGAGAGAGCTGTGGAGGAATACCCATCCGCATCTTCGGATCGAAACCCGGCCGGGTGTCCTTCAATGTCTTCACTTACTTCGTCGCCGGAGAGAGATTTAGAGAAGGAGGCAGATGCGTCTCCTAAAGTTTCGGTCTTTTCGAATCAAAGTTCTCCAATTTCTTTACCACCCAAAGCTTCAGCGTTTTCACCATCTTCAAGTTGCTCGTCTTCACCGGATAGAGCATCAAATGCTTCTGATGAAAATGCCAAGTCTCCTTCAGATGGGTCTACGTCACCGGAGAGAGGTTTGGAGAAGAGCCCAGTTGCATCGCCAAGAACTTCAAATGCTTCTGATCGATCATTTATTCATTTGGATCCAAAGAGGCAGTCTTTTTCGTCGGCTTCTTCAGCGTCTTCTTCACCGGAGAGAGAGTTGGGGAACAATTCAGATGCATCACCGAAAGTCTCCAATGCTTCTAATCGTATTGAAGAATCTTCATCTAGACTTAATGGGGCTTTGAAGATGCCTCTTTCGATACCGCCACCTCCTCCGCCTCCACTGCCTCCTTCACTAAGACTGTGGGAGACTCCAAGTCCTAAAACACCAGCTGGCCAACCAATCTCTAGACCTCCGGCTCTCATACCTCCTTCAAGGCCTTTCGTGTTTCAAAACCCAGGGAAGGTCTCTGTTTCACCAGTGCAGCTGCCACCGAGTTCTGCACCATTGGAGCCTATTGAGGAGACTCCGAAACCCAAGTTAAAGCCATTGCATTGGGATAAAGTTAGAGCTAGCTCTGACCGTGAAATGGTGTGGGATCAGCTAAGATCAAGCTCCTTCAAATTGAATGAAGAAATGATAGAGACATTGTTCGTTGTAAATACACCCAAACCGAATCCAAAGGAAACAACCCCACGCCCGGTTATTCCCTCACCTAAGCAAGAGAACAGAGTACTCAATCCTAAAAAGTCCCAAAATATTGCAATTTTGCTTAGGGCACTCAATGTGACCATAGAAGAAGTTTGTGAAGCGCTCATAGAAGGTAATGCAGATGCTCTTGGAACTGAATTACTTGAAAGTCTATTGAAGATGGCTCCAACCAAAGAAGAAGAGCGTAAGCTGAAGGAGTACAAAGATGATTCACCAGTTAAGCTTGGCCCTGCCGAGAAATTTCTGAAAGAACTGCTTGATGTTCCTTTTGCATTTAAAAGGGTTGAGGCAATGCTTTACATGACTAATTTTGAATCTGAAATCGAATACCTGAAAAAGTCTTTCGAAACTCTAGAGGCTGCCTGTGAAGAATTGAGAAATAGTAGGATGTTCTTGAAGCTTTTAGAGGCTGTGCTCAAGACTGGAAACAGAATGAATGTTGGGACAAACCGCGGTGATGCCCATGCCTTCAAACTTGACACACTCCTCAAGCTCGCTGACGTTAAGGGAGCAGATGGAAAAACCACGCTTTTGCATTTTGTTGTACAAGAAATCATAAGAACTGAAGGTGCTCGTCTCATTGGTGGTCAAACTTCATCAAACACAGCTTTGAATGACGATGCCAAGTGTAGGAGACTTGGCCTGCCAGTTGTTTCAGGTCTCAGTTCAGACCTCACTAATGTCAAGAAAGCTGCTGCCATGGACTCCGATGTGCTTAGCGGTGAAGTTTTTAAGCTTTCTAGAGGTATTAGCAACATTGGGGAGGTTGTGCAATTAGCTGAGAGAAAGGTGTCAGATGGAAGCAGCGGGAAATTTGCAGAGTCCATGACCATGTTCATGAAAATGGCCGAGGAGGAGATTATAAGACTTCAAGCTCAAGAAAGTGTTGCTTTGTCGTTGGTGAAGGAGATCACGGAGTACTTCCATGGGAATTCCGCTAGGGAAGAAGCTCACCCATTTCGAATCTTCATGGTAGTGAGAGACTTTCTAACAGTTCTTGATCGGGTATGTAAGGAAGTTGGTCTGATAAACGAGCGAACCATTGTTAGTAATGCCCAAAAGTTCCCAGTTCCAGTAAATCCCATGCTACAGCAACAAGTATTTCCAGTAAACCCAATGCTACCGCAAGTTCATCCTGTAAACCCAATGCTACCGCAAGTTCTCCCTGGAATCCATGGCAGGCGACCCTACGATTCATCCGATGATGAGAGTACGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003779 GO:0005488 GO:0005515 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0006996 GO:0007010 GO:0007015 GO:0008064 GO:0008092 GO:0008150 GO:0009987 GO:0010638 GO:0010639 GO:0016020 GO:0016043 GO:0030029 GO:0030036 GO:0030312 GO:0030832 GO:0030833 GO:0030834 GO:0030835 GO:0030837 GO:0030838 GO:0031333 GO:0031334 GO:0032271 GO:0032272 GO:0032273 GO:0032535 GO:0032956 GO:0032970 GO:0033043 GO:0043242 GO:0043244 GO:0043254 GO:0044087 GO:0044089 GO:0044464 GO:0044877 GO:0045010 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051015 GO:0051016 GO:0051128 GO:0051129 GO:0051130 GO:0051493 GO:0051494 GO:0051495 GO:0051693 GO:0065007 GO:0065008 GO:0071840 GO:0071944 GO:0090066 GO:0097435 GO:0110053 GO:1901879 GO:1901880 GO:1902903 GO:1902904 GO:1902905

KEGG Pathways

Metabolic & Signaling

ko04320 map04320

Pfam Domains

Protein Families

FH2

Protein Analysis

1120

Amino Acids

121.47

Weight (kDa)

7.54

Isoelectric Point (pI)

77.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FH2	PF02181	652 - 1047	4.5e-122	Formin Homology 2 Domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0007674)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G25500
fragaria_vesca	FvH4_2g17360 FvH4_2g17360 FvH4_2g17360
malus_domestica	MD05G1152500.v1.1 MD10G1147000.v1.1
prunus_persica	Prupe.8G185400_v2.0.a1
pyrus_communis	pycom05g14690 pycom10g12670
rosa_chinensis	RchiOBHm_Chr6g0281991
rosa_laevigata	RLG00000012921
rosa_multiflora	Rmu_sc0000569.1_g000001 Rmu_sc0001255.1_g000001 Rmu_sc0011823.1_g000001
rosa_roxburghii	Rroxscaffold_7G00186650
rosa_rugosa	Rorug06G0144700
rosa_samantha	Rh4CG162200 Rh4CG270300 Rh6AG257900 Rh6BG260900 Rh6CG259800 Rh6DG252200 Rh7AG416400
rosa_wichuraiana	Rw6G022300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	3005
AarI	CACCTGC	1 cut(s)	322
AatII	GACGTC	1 cut(s)	914
Acc16I	TGCGCA	1 cut(s)	46
Acc36I	ACCTGC	1 cut(s)	322
AccB1I	GGYRCC	4 cut(s)	310, 575, 626, 632
AccBSI	CCGCTC	1 cut(s)	685
AccI	GTMKAC	2 cut(s)	663, 1502
AccII	CGCG	5 cut(s)	594, 609, 621, 644, 2595
AccIII	TCCGGA	2 cut(s)	534, 1156
AclWI	GGATC	9 cut(s)	70, 83, 462, 814, 850, 1278, 1583, 1596, 2037
AcoI	YGGCCR	7 cut(s)	258, 279, 741, 876, 1281, 1825, 2988
AcsI	RAATTY	4 cut(s)	934, 2381, 2954, 3073
AcuI	CTGAAG	6 cut(s)	186, 1395, 1476, 1605, 2354, 2727
AcyI	GRCGYC	4 cut(s)	627, 633, 911, 1085
AfaI	GTAC	6 cut(s)	173, 2166, 2342, 2688, 3062, 3355
AfeI	AGCGCT	1 cut(s)	2244
AfiI	CCNNNNNNNGG	9 cut(s)	69, 448, 519, 1496, 1517, 1894, 2020, 2131, 2772
AhdI	GACNNNNNGTC	2 cut(s)	1105, 1806
AjnI	CCWGG	3 cut(s)	306, 1888, 3307
Alw21I	GWGCWC	6 cut(s)	617, 710, 920, 926, 2559, 2716
AlwI	GGATC	9 cut(s)	70, 83, 462, 814, 850, 1278, 1583, 1596, 2037
AlwNI	CAGNNNCTG	2 cut(s)	1045, 1198
Ama87I	CYCGRG	2 cut(s)	887, 1022
Aor13HI	TCCGGA	2 cut(s)	534, 1156
Aor51HI	AGCGCT	1 cut(s)	2244
ApeKI	GCWGC	9 cut(s)	516, 1039, 1189, 1915, 1918, 2501, 2834, 2837, 2946
ApoI	RAATTY	4 cut(s)	934, 2381, 2954, 3073
ArsI	GACNNNNNNTTYG	2 cut(s)	1586, 1618
AspLEI	GCGC	8 cut(s)	47, 362, 423, 609, 629, 635, 644, 2245
AspS9I	GGNCC	6 cut(s)	522, 537, 673, 756, 949, 2369
AsuC2I	CCSGG	8 cut(s)	257, 278, 655, 700, 952, 1280, 1285, 2132
AsuII	TTCGAA	3 cut(s)	1373, 2487, 3103
AsuNHI	GCTAGC	1 cut(s)	2003
AvaI	CYCGRG	2 cut(s)	887, 1022
AvaII	GGWCC	4 cut(s)	522, 537, 673, 756
BaeGI	GKGCMC	1 cut(s)	2212
BalI	TGGCCA	1 cut(s)	1827
BamHI	GGATCC	2 cut(s)	75, 1588
BanI	GGYRCC	4 cut(s)	310, 575, 626, 632
BanII	GRGCYC	2 cut(s)	617, 1535
BauI	CACGAG	1 cut(s)	919
BbsI	GAAGAC	8 cut(s)	391, 921, 1006, 1020, 1218, 1293, 1434, 1620
Bbv12I	GWGCWC	6 cut(s)	617, 710, 920, 926, 2559, 2716
BbvI	GCAGC	9 cut(s)	528, 1051, 1201, 1905, 1927, 2488, 2821, 2824, 2958
BccI	CCATC	9 cut(s)	374, 1012, 1126, 1264, 1432, 1490, 2296, 2651, 2933
BceAI	ACGGC	5 cut(s)	338, 368, 380, 396, 1072
BciT130I	CCWGG	3 cut(s)	308, 1890, 3309
BcnI	CCSGG	8 cut(s)	257, 278, 655, 700, 952, 1280, 1285, 2132
BfaI	CTAG	6 cut(s)	1716, 1839, 2004, 2495, 2883, 3081
BfmI	CTRYAG	2 cut(s)	463, 3230
BfoI	RGCGCY	3 cut(s)	630, 636, 2246
BfuAI	ACCTGC	1 cut(s)	322
BglI	GCCNNNNNGGC	1 cut(s)	749
BlpI	GCTNAGC	3 cut(s)	120, 1068, 2858
BmcAI	AGTACT	2 cut(s)	2166, 3062
Bme18I	GGWCC	4 cut(s)	522, 537, 673, 756
BmeRI	GACNNNNNGTC	2 cut(s)	1105, 1806
BmeT110I	CYCGRG	2 cut(s)	887, 1022
BmgT120I	GGNCC	6 cut(s)	522, 537, 673, 756, 949, 2369
BmrI	ACTGGG	2 cut(s)	1529, 3203
BmtI	GCTAGC	1 cut(s)	2007
BmuI	ACTGGG	2 cut(s)	1529, 3203
BpiI	GAAGAC	8 cut(s)	391, 921, 1006, 1020, 1218, 1293, 1434, 1620
BplI	GAGNNNNNCTC	2 cut(s)	779, 811
BpmI	CTGGAG	3 cut(s)	496, 662, 1166
Bpu10I	CCTNAGC	2 cut(s)	2148, 2204
Bpu1102I	GCTNAGC	3 cut(s)	120, 1068, 2858
Bpu14I	TTCGAA	3 cut(s)	1373, 2487, 3103
BpuEI	CTTGAG	3 cut(s)	2543, 2615, 3003
BpuMI	CCSGG	8 cut(s)	257, 278, 655, 700, 952, 1280, 1285, 2132
Bsa29I	ATCGAT	1 cut(s)	1570
BsaAI	YACGTR	1 cut(s)	3357
BsaBI	GATNNNNATC	1 cut(s)	108
BsaHI	GRCGYC	4 cut(s)	627, 633, 911, 1085
BsaI	GGTCTC	5 cut(s)	644, 855, 1209, 1903, 2807
BsaWI	WCCGGW	9 cut(s)	69, 534, 758, 812, 938, 1156, 1447, 1510, 1636
BsaXI	ACNNNNNCTCC	4 cut(s)	275, 305, 1631, 1661
Bsc4I	CCNNNNNNNGG	9 cut(s)	69, 448, 519, 1496, 1517, 1894, 2020, 2131, 2772
Bse118I	RCCGGY	9 cut(s)	417, 539, 629, 635, 739, 748, 878, 946, 1132
Bse1I	ACTGG	9 cut(s)	1149, 1535, 1910, 2357, 2569, 2789, 3209, 3215, 3248
Bse3DI	GCAATG	3 cut(s)	508, 1979, 2439
Bse8I	GATNNNNATC	1 cut(s)	108
BseAI	TCCGGA	2 cut(s)	534, 1156
BseBI	CCWGG	3 cut(s)	308, 1890, 3309
BseCI	ATCGAT	1 cut(s)	1570
BseGI	GGATG	5 cut(s)	109, 1256, 2535, 3274, 3338
BseJI	GATNNNNATC	1 cut(s)	108
BseLI	CCNNNNNNNGG	9 cut(s)	69, 448, 519, 1496, 1517, 1894, 2020, 2131, 2772
BseMI	GCAATG	3 cut(s)	508, 1979, 2439
BseMII	CTCAG	5 cut(s)	134, 707, 1059, 2818, 2913
BseNI	ACTGG	9 cut(s)	1149, 1535, 1910, 2357, 2569, 2789, 3209, 3215, 3248
BseSI	GKGCMC	1 cut(s)	2212
BseX3I	CGGCCG	2 cut(s)	741, 1281
BseXI	GCAGC	9 cut(s)	528, 1051, 1201, 1905, 1927, 2488, 2821, 2824, 2958
BsgI	GTGCAG	2 cut(s)	1917, 1934
Bsh1236I	CGCG	5 cut(s)	594, 609, 621, 644, 2595
Bsh1285I	CGRYCG	2 cut(s)	744, 1284
BshNI	GGYRCC	4 cut(s)	310, 575, 626, 632
BshVI	ATCGAT	1 cut(s)	1570
BsiEI	CGRYCG	2 cut(s)	744, 1284
BsiHKAI	GWGCWC	6 cut(s)	617, 710, 920, 926, 2559, 2716
BsiHKCI	CYCGRG	2 cut(s)	887, 1022
BslFI	GGGAC	4 cut(s)	535, 682, 2167, 2599
BslI	CCNNNNNNNGG	9 cut(s)	69, 448, 519, 1496, 1517, 1894, 2020, 2131, 2772
BsmBI	CGTCTC	4 cut(s)	141, 756, 1356, 2723
BsmFI	GGGAC	4 cut(s)	535, 682, 2167, 2599
Bso31I	GGTCTC	5 cut(s)	644, 855, 1209, 1903, 2807
BsoBI	CYCGRG	2 cut(s)	887, 1022
Bsp119I	TTCGAA	3 cut(s)	1373, 2487, 3103
Bsp1286I	GDGCHC	8 cut(s)	617, 710, 920, 926, 1535, 2212, 2559, 2716
Bsp13I	TCCGGA	2 cut(s)	534, 1156
Bsp1407I	TGTACA	1 cut(s)	2686
Bsp1720I	GCTNAGC	3 cut(s)	120, 1068, 2858
Bsp19I	CCATGG	3 cut(s)	2841, 3067, 3316
BspCNI	CTCAG	5 cut(s)	133, 708, 1060, 2817, 2914
BspDI	ATCGAT	1 cut(s)	1570
BspEI	TCCGGA	2 cut(s)	534, 1156
BspFNI	CGCG	5 cut(s)	594, 609, 621, 644, 2595
BspHI	TCATGA	1 cut(s)	2979
BspMI	ACCTGC	1 cut(s)	322
BspOI	GCTAGC	1 cut(s)	2007
BspPI	GGATC	9 cut(s)	70, 83, 462, 814, 850, 1278, 1583, 1596, 2037
BspQI	GCTCTTC	3 cut(s)	38, 1523, 2316
BspT104I	TTCGAA	3 cut(s)	1373, 2487, 3103
BspT107I	GGYRCC	4 cut(s)	310, 575, 626, 632
BspTNI	GGTCTC	5 cut(s)	644, 855, 1209, 1903, 2807
BsrBI	CCGCTC	1 cut(s)	685
BsrDI	GCAATG	3 cut(s)	508, 1979, 2439
BsrFI	RCCGGY	9 cut(s)	417, 539, 629, 635, 739, 748, 878, 946, 1132
BsrGI	TGTACA	1 cut(s)	2686
BsrI	ACTGG	9 cut(s)	1149, 1535, 1910, 2357, 2569, 2789, 3209, 3215, 3248
BssAI	RCCGGY	9 cut(s)	417, 539, 629, 635, 739, 748, 878, 946, 1132
BssNI	GRCGYC	4 cut(s)	627, 633, 911, 1085
BssSI	CACGAG	1 cut(s)	919
BssT1I	CCWWGG	3 cut(s)	2841, 3067, 3316
Bst2BI	CACGAG	1 cut(s)	919
Bst2UI	CCWGG	3 cut(s)	308, 1890, 3309
Bst4CI	ACNGT	6 cut(s)	580, 821, 1105, 1794, 2015, 3136
Bst6I	CTCTTC	6 cut(s)	38, 256, 765, 780, 1523, 2316
BstACI	GRCGYC	4 cut(s)	627, 633, 911, 1085
BstAPI	GCANNNNNTGC	3 cut(s)	1045, 1198, 1463
BstAUI	TGTACA	1 cut(s)	2686
BstBAI	YACGTR	1 cut(s)	3357
BstBI	TTCGAA	3 cut(s)	1373, 2487, 3103
BstDSI	CCRYGG	5 cut(s)	592, 2593, 2841, 3067, 3316
BstEII	GGTNACC	1 cut(s)	815
BstF5I	GGATG	5 cut(s)	109, 1256, 2535, 3274, 3338
BstFNI	CGCG	5 cut(s)	594, 609, 621, 644, 2595
BstH2I	RGCGCY	3 cut(s)	630, 636, 2246
BstHHI	GCGC	8 cut(s)	47, 362, 423, 609, 629, 635, 644, 2245
BstMCI	CGRYCG	2 cut(s)	744, 1284
BstNI	CCWGG	3 cut(s)	308, 1890, 3309
BstPI	GGTNACC	1 cut(s)	815
BstSFI	CTRYAG	2 cut(s)	463, 3230
BstSLI	GKGCMC	1 cut(s)	2212
BstSNI	TACGTA	1 cut(s)	3357
BstUI	CGCG	5 cut(s)	594, 609, 621, 644, 2595
BstV1I	GCAGC	9 cut(s)	528, 1051, 1201, 1905, 1927, 2488, 2821, 2824, 2958
BstV2I	GAAGAC	8 cut(s)	391, 921, 1006, 1020, 1218, 1293, 1434, 1620
BstX2I	RGATCY	4 cut(s)	75, 467, 806, 1588
BstXI	CCANNNNNNTGG	1 cut(s)	1986
BstYI	RGATCY	4 cut(s)	75, 467, 806, 1588
BstZI	CGGCCG	2 cut(s)	741, 1281
Bsu15I	ATCGAT	1 cut(s)	1570
BsuTUI	ATCGAT	1 cut(s)	1570
BtgI	CCRYGG	5 cut(s)	592, 2593, 2841, 3067, 3316
BtgZI	GCGATG	1 cut(s)	1527
BtsCI	GGATG	5 cut(s)	109, 1256, 2535, 3274, 3338
BtsI	GCAGTG	4 cut(s)	710, 876, 1043, 1772
BtsIMutI	CAGTG	6 cut(s)	710, 876, 991, 1043, 1772, 1917
BveI	ACCTGC	1 cut(s)	322
CaiI	CAGNNNCTG	2 cut(s)	1045, 1198
CciI	TCATGA	1 cut(s)	2979
CfoI	GCGC	8 cut(s)	47, 362, 423, 609, 629, 635, 644, 2245
Cfr10I	RCCGGY	9 cut(s)	417, 539, 629, 635, 739, 748, 878, 946, 1132
Cfr13I	GGNCC	6 cut(s)	522, 537, 673, 756, 949, 2369
Cfr42I	CCGCGG	2 cut(s)	595, 2596
ClaI	ATCGAT	1 cut(s)	1570
CpoI	CGGWCCG	2 cut(s)	537, 756
CseI	GACGC	3 cut(s)	1093, 1338, 1614
Csp6I	GTAC	6 cut(s)	172, 2165, 2341, 2687, 3061, 3354
CspI	CGGWCCG	2 cut(s)	537, 756
CviQI	GTAC	6 cut(s)	172, 2165, 2341, 2687, 3061, 3354
DinI	GGCGCC	2 cut(s)	628, 634
DraI	TTTAAA	1 cut(s)	2419
DriI	GACNNNNNGTC	2 cut(s)	1105, 1806
EaeI	YGGCCR	7 cut(s)	258, 279, 741, 876, 1281, 1825, 2988
EagI	CGGCCG	2 cut(s)	741, 1281
Eam1104I	CTCTTC	6 cut(s)	38, 256, 765, 780, 1523, 2316
Eam1105I	GACNNNNNGTC	2 cut(s)	1105, 1806
EarI	CTCTTC	6 cut(s)	38, 256, 765, 780, 1523, 2316
EciI	GGCGGA	4 cut(s)	129, 361, 382, 1755
Ecl136II	GAGCTC	1 cut(s)	615
EclXI	CGGCCG	2 cut(s)	741, 1281
Eco105I	TACGTA	1 cut(s)	3357
Eco130I	CCWWGG	3 cut(s)	2841, 3067, 3316
Eco147I	AGGCCT	1 cut(s)	1870
Eco24I	GRGCYC	2 cut(s)	617, 1535
Eco31I	GGTCTC	5 cut(s)	644, 855, 1209, 1903, 2807
Eco47I	GGWCC	4 cut(s)	522, 537, 673, 756
Eco47III	AGCGCT	1 cut(s)	2244
Eco52I	CGGCCG	2 cut(s)	741, 1281
Eco53kI	GAGCTC	1 cut(s)	615
Eco57I	CTGAAG	6 cut(s)	186, 1395, 1476, 1605, 2354, 2727
Eco88I	CYCGRG	2 cut(s)	887, 1022
Eco91I	GGTNACC	1 cut(s)	815
EcoICRI	GAGCTC	1 cut(s)	615
EcoO109I	RGGNCCY	1 cut(s)	522
EcoO65I	GGTNACC	1 cut(s)	815
EcoRI	GAATTC	1 cut(s)	3073
EcoRII	CCWGG	3 cut(s)	306, 1888, 3307
EcoT14I	CCWWGG	3 cut(s)	2841, 3067, 3316
EcoT22I	ATGCAT	1 cut(s)	1669
EcoT38I	GRGCYC	2 cut(s)	617, 1535
EgeI	GGCGCC	2 cut(s)	628, 634
EheI	GGCGCC	2 cut(s)	628, 634
ErhI	CCWWGG	3 cut(s)	2841, 3067, 3316
Esp3I	CGTCTC	4 cut(s)	141, 756, 1356, 2723
FalI	AAGNNNNNCTT	4 cut(s)	2382, 2414, 3016, 3048
FaqI	GGGAC	4 cut(s)	535, 682, 2167, 2599
FauI	CCCGC	6 cut(s)	238, 243, 512, 599, 696, 2942
FblI	GTMKAC	2 cut(s)	663, 1502
FokI	GGATG	5 cut(s)	96, 1243, 2542, 3261, 3325
FriOI	GRGCYC	2 cut(s)	617, 1535
FspBI	CTAG	6 cut(s)	1716, 1839, 2004, 2495, 2883, 3081
FspI	TGCGCA	1 cut(s)	46
GlaI	GCGC	8 cut(s)	46, 361, 422, 608, 628, 634, 643, 2244
GsuI	CTGGAG	3 cut(s)	496, 662, 1166
HaeII	RGCGCY	3 cut(s)	630, 636, 2246
HgaI	GACGC	3 cut(s)	1093, 1338, 1614
HhaI	GCGC	8 cut(s)	47, 362, 423, 609, 629, 635, 644, 2245
Hin1I	GRCGYC	4 cut(s)	627, 633, 911, 1085
Hin6I	GCGC	8 cut(s)	45, 360, 421, 607, 627, 633, 642, 2243
HinP1I	GCGC	8 cut(s)	45, 360, 421, 607, 627, 633, 642, 2243
HincII	GTYRAC	2 cut(s)	586, 664
HindII	GTYRAC	2 cut(s)	586, 664
HindIII	AAGCTT	5 cut(s)	826, 1407, 2363, 2540, 2876
Hpy166II	GTNNAC	6 cut(s)	586, 664, 944, 1503, 3253, 3283
Hpy8I	GTNNAC	6 cut(s)	586, 664, 944, 1503, 3253, 3283
HpyCH4III	ACNGT	6 cut(s)	580, 821, 1105, 1794, 2015, 3136
HpyCH4IV	ACGT	4 cut(s)	911, 1505, 2643, 3356
HpySE526I	ACGT	4 cut(s)	911, 1505, 2643, 3356
Hsp92I	GRCGYC	4 cut(s)	627, 633, 911, 1085
HspAI	GCGC	8 cut(s)	45, 360, 421, 607, 627, 633, 642, 2243
KasI	GGCGCC	2 cut(s)	626, 632
KflI	GGGWCCC	1 cut(s)	522
Kpn2I	TCCGGA	2 cut(s)	534, 1156
KroI	GCCGGC	4 cut(s)	417, 629, 635, 878
KroNI	GCCGGC	4 cut(s)	419, 631, 637, 880
KspI	CCGCGG	2 cut(s)	595, 2596
LguI	GCTCTTC	3 cut(s)	38, 1523, 2316
Lsp1109I	GCAGC	9 cut(s)	528, 1051, 1201, 1905, 1927, 2488, 2821, 2824, 2958
MaeI	CTAG	6 cut(s)	1716, 1839, 2004, 2495, 2883, 3081
MaeII	ACGT	4 cut(s)	911, 1505, 2643, 3356
MaeIII	GTNAC	4 cut(s)	815, 954, 1506, 2218
MbiI	CCGCTC	1 cut(s)	685
MflI	RGATCY	4 cut(s)	75, 467, 806, 1588
MhlI	GDGCHC	8 cut(s)	617, 710, 920, 926, 1535, 2212, 2559, 2716
MlsI	TGGCCA	1 cut(s)	1827
MluNI	TGGCCA	1 cut(s)	1827
Mly113I	GGCGCC	2 cut(s)	627, 633
MlyI	GAGTC	7 cut(s)	659, 1034, 1225, 1795, 1951, 2840, 2972
MmeI	TCCRAC	5 cut(s)	345, 627, 820, 1106, 2333
Mox20I	TGGCCA	1 cut(s)	1827
Mph1103I	ATGCAT	1 cut(s)	1669
MreI	CGCCGGCG	3 cut(s)	417, 629, 635
MroI	TCCGGA	2 cut(s)	534, 1156
MroNI	GCCGGC	4 cut(s)	417, 629, 635, 878
MscI	TGGCCA	1 cut(s)	1827
MseI	TTAA	6 cut(s)	1722, 1973, 2361, 2418, 2646, 2874
MslI	CAYNNNNRTG	4 cut(s)	2972, 2978, 2984, 3116
Msp20I	TGGCCA	1 cut(s)	1827
MspA1I	CMGCKG	7 cut(s)	519, 594, 1067, 1823, 1918, 2595, 2949
MvaI	CCWGG	3 cut(s)	308, 1890, 3309
MvnI	CGCG	5 cut(s)	594, 609, 621, 644, 2595
NaeI	GCCGGC	4 cut(s)	419, 631, 637, 880
NarI	GGCGCC	2 cut(s)	627, 633
NciI	CCSGG	8 cut(s)	257, 278, 655, 700, 952, 1280, 1285, 2132
NcoI	CCATGG	3 cut(s)	2841, 3067, 3316
NgoMIV	GCCGGC	4 cut(s)	417, 629, 635, 878
NheI	GCTAGC	1 cut(s)	2003
NmeAIII	GCCGAG	5 cut(s)	552, 825, 1194, 2401, 3016
NmuCI	GTSAC	3 cut(s)	954, 1506, 2218
NsbI	TGCGCA	1 cut(s)	46
NsiI	ATGCAT	1 cut(s)	1669
NspV	TTCGAA	3 cut(s)	1373, 2487, 3103
PaeR7I	CTCGAG	1 cut(s)	887
PagI	TCATGA	1 cut(s)	2979
PaqCI	CACCTGC	1 cut(s)	322
PasI	CCCWGGG	1 cut(s)	1889
PceI	AGGCCT	1 cut(s)	1870
PciSI	GCTCTTC	3 cut(s)	38, 1523, 2316
PcsI	WCGNNNNNNNCGW	6 cut(s)	393, 579, 606, 917, 1370, 3339
PdiI	GCCGGC	4 cut(s)	419, 631, 637, 880
PleI	GAGTC	7 cut(s)	659, 1033, 1224, 1795, 1951, 2840, 2971
PluTI	GGCGCC	2 cut(s)	630, 636
PpsI	GAGTC	7 cut(s)	659, 1033, 1224, 1795, 1951, 2840, 2971
Ppu21I	YACGTR	1 cut(s)	3357
PpuMI	RGGWCCY	1 cut(s)	522
PsiI	TTATAA	1 cut(s)	3005
Psp124BI	GAGCTC	1 cut(s)	617
Psp5II	RGGWCCY	1 cut(s)	522
Psp6I	CCWGG	3 cut(s)	306, 1888, 3307
PspEI	GGTNACC	1 cut(s)	815
PspGI	CCWGG	3 cut(s)	306, 1888, 3307
PspPI	GGNCC	6 cut(s)	522, 537, 673, 756, 949, 2369
PspPPI	RGGWCCY	1 cut(s)	522
PstNI	CAGNNNCTG	2 cut(s)	1045, 1198
PsuI	RGATCY	4 cut(s)	75, 467, 806, 1588
PvuII	CAGCTG	3 cut(s)	1067, 1823, 1918
RsaI	GTAC	6 cut(s)	173, 2166, 2342, 2688, 3062, 3355
RsaNI	GTAC	6 cut(s)	172, 2165, 2341, 2687, 3061, 3354
RseI	CAYNNNNRTG	4 cut(s)	2972, 2978, 2984, 3116
Rsr2I	CGGWCCG	2 cut(s)	537, 756
RsrII	CGGWCCG	2 cut(s)	537, 756
SacI	GAGCTC	1 cut(s)	617
SacII	CCGCGG	2 cut(s)	595, 2596
SalI	GTCGAC	1 cut(s)	662
SapI	GCTCTTC	3 cut(s)	38, 1523, 2316
SaqAI	TTAA	6 cut(s)	1722, 1973, 2361, 2418, 2646, 2874
Sau96I	GGNCC	6 cut(s)	522, 537, 673, 756, 949, 2369
ScaI	AGTACT	2 cut(s)	2166, 3062
SchI	GAGTC	7 cut(s)	659, 1034, 1225, 1795, 1951, 2840, 2972
SduI	GDGCHC	8 cut(s)	617, 710, 920, 926, 1535, 2212, 2559, 2716
SfcI	CTRYAG	2 cut(s)	463, 3230
SfoI	GGCGCC	2 cut(s)	628, 634
Sfr274I	CTCGAG	1 cut(s)	887
Sfr303I	CCGCGG	2 cut(s)	595, 2596
SfuI	TTCGAA	3 cut(s)	1373, 2487, 3103
SgrAI	CRCCGGYG	4 cut(s)	417, 629, 635, 1132
SgrBI	CCGCGG	2 cut(s)	595, 2596
SinI	GGWCC	4 cut(s)	522, 537, 673, 756
SlaI	CTCGAG	1 cut(s)	887
SmiMI	CAYNNNNRTG	4 cut(s)	2972, 2978, 2984, 3116
SmlI	CTYRAG	4 cut(s)	887, 2558, 2630, 3018
SmoI	CTYRAG	4 cut(s)	887, 2558, 2630, 3018
SnaBI	TACGTA	1 cut(s)	3357
SseBI	AGGCCT	1 cut(s)	1870
SspDI	GGCGCC	2 cut(s)	626, 632
SspI	AATATT	2 cut(s)	1153, 2191
SspMI	CTAG	6 cut(s)	1716, 1839, 2004, 2495, 2883, 3081
SstI	GAGCTC	1 cut(s)	617
StuI	AGGCCT	1 cut(s)	1870
StyI	CCWWGG	3 cut(s)	2841, 3067, 3316
TaaI	ACNGT	6 cut(s)	580, 821, 1105, 1794, 2015, 3136
TaiI	ACGT	4 cut(s)	914, 1508, 2646, 3359
TaqII	GACCGA	1 cut(s)	1354
TatI	WGTACW	4 cut(s)	2164, 2340, 2686, 3060
TauI	GCSGC	8 cut(s)	91, 365, 624, 627, 642, 685, 869, 1132
Tru1I	TTAA	6 cut(s)	1722, 1973, 2361, 2418, 2646, 2874
Tru9I	TTAA	6 cut(s)	1722, 1973, 2361, 2418, 2646, 2874
TscAI	CASTG	6 cut(s)	710, 876, 991, 1050, 1779, 1917
TseFI	GTSAC	3 cut(s)	954, 1506, 2218
TseI	GCWGC	9 cut(s)	516, 1039, 1189, 1915, 1918, 2501, 2834, 2837, 2946
Tsp45I	GTSAC	3 cut(s)	954, 1506, 2218
TspGWI	ACGGA	2 cut(s)	123, 3071
TspRI	CASTG	6 cut(s)	710, 876, 991, 1050, 1779, 1917
VpaK11BI	GGWCC	4 cut(s)	522, 537, 673, 756
XapI	RAATTY	4 cut(s)	934, 2381, 2954, 3073
XbaI	TCTAGA	4 cut(s)	1715, 1838, 2494, 2882
XhoI	CTCGAG	1 cut(s)	887
XmiI	GTMKAC	2 cut(s)	663, 1502
XspI	CTAG	6 cut(s)	1716, 1839, 2004, 2495, 2883, 3081
ZraI	GACGTC	1 cut(s)	912
ZrmI	AGTACT	2 cut(s)	2166, 3062
Zsp2I	ATGCAT	1 cut(s)	1669

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.