Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0007674

Physical Location & Seq

Genomic Coordinates Forward (+)

44135680 .. 44140172

Gene Structure 4493 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G022300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3339 bp

ATGCCCTCCTCCTCTTTCTTCTTCCTCTTGCTCTTTCTATTCTGCGCACTACCCTTCGTAGCCCCTAGCCGGCGGATCCTCCACCAGCCGTTGTTACCCCAAGATTCTCTTCCTCCTGCTCCGCCTCCGGCTCCGTCTCCGCCTTCTCTGCCTCCCAACCCGAATCCAAAGTACCCATTTTCAACTTCCAATTCTACCCCTTCAGATTCTCCCTTTTTCCCAACCTACCCCGCCCCGCCTCCTCCTCCCTCCTCCCCGGCCACATTCGCCTCCTTCCCGGCCAACATCTCCTCCCTCATTCTCCCCCAGGCACCTGCCTCCAACTCTAAATCCCACAAGCTCGTTGCCCTCGCCGTCTGCGCCGCCATCTCCGCCGTCATCGCCGTCGCCTCCGCCGTCTTCGTCCTCTGCCGTCGCCGGCGCAACAACAACCGCAACTTCCCCGATGAGGACGACAAGACCTACAGATCCGAGCAGAGCAACCGCTTCTTTCAGGCCAGCAATGCCCGCTCCAGCAGCGGGGCCCACAAGCTCCGGACCGGCTCCTCCACCAGCTCCGAGTTCCTCTACCTCGGCACGGTCGTCAACTCCCGCGGAATCGACGAGCGCGTGAGCTCACGCGGCGGCGCGTTGGAGAATCGGAAGGTCGACTCGCCGGACCTCCAGCCGCTGCCGCCGCTGTCCCGCCAGTGCTCCAAGCTCAGTAACTGCACCAATGCCGAACCGGACGAACCGGCTCGGACAGGAGACGAGGAAGAGGAGGAGGAAGAAGAGTTTTACTCGCCGAGAGGATCTTCCGGTGACCGTGAAAGCTTCAATGGAGCTGGATCGGGGTCGCGGAGACTATTCGCCTCCGTGGTGGCAGGCGATCTCGAGGAAAGAAACAGCGAAACGACGTCGTGCTCGTGCTCGTCTTCAAATTCCGGTTCACCGGCCCGGTCACACTCTATTAGTCTATCTCCGGCGGTCAGTGTAAGTCCGAGAAGACCATCACTACCCAAATCTCCCGAGTCTTCTGTTATGCAGCCTCTGCCTTCACAGCCAGCTGAGCCTCGTTATTCGACGCCGTTTGGTTTCGAAACGGTGTCTCGTTCCCCATCTTCGTCGCCGCCGGTGAGACTACTGGAGAACATTCCGGAATCCTCGCCGAGAAGATCGAGTGTTTCGCAGCAGAATCTTCGGTCGCCGTCGTTGAGTCCAATGTCTTCGCCGGAGAGAGCTGTGGAGGAATACCCATCTGCATCTTCGGATCGAAACCCGGCCGGGTCTCCTTCAATGTCTTCACTTACTTCGTCGCCGGAGAGAGATTTGGAGAAGGAGGCAGACGCGTCTCCAAAAGTTTCGGTCTTTTCGAATCAAAGTCCTCCAATTTCTTTACCACCAAAAGCTTCAGCGTTTTCACTATCTTCAAGTTGCTCGTCTTCACCGGATAGAGTATCAAATGCTTCTGATGAAAAGGCCAAGTCTCCTTCAGATGGGTCCATGTCACCGGAGAGAGGTTTGGAGAAGAGCCCAGTTGCATCGCCAAGAACTTCAAATGCTTCTGATCGATCATTTATTCATTTGGATCCAAAGAGGCAGTCTTTTTCGTCGGCTTCTTCGGTGTCTTCTTCACCGGAGAGAGAGTTGGGGAACAATTCAGATGCATCACCGAAAGTCTCCAATGTTTCTAATCGTATTGAAGAATCTTCATCTAGACTTAATGGGGCTTTGAAGATGCCTCTTTCGATACCGCCACCTCCTCCGCCACCACTGCCTCCTTCACTAAGACTGTGGGAGACTCCAAGTCCTAAAACACCAGCTGGCCAATCAATCTCGAGACCTCCAGCTCTTATACCTCCTTCGAGGCCTTTCGTGTTTCAAAACCCAGGGAAGGTCTCTGTTTCACCAGTGCAGCTGCCACCGAGTTCTGCACCATTGGAGCCCATTGAGGAGACTCCGAAACCTAAGTTAAAGCCATTGCATTGGGATAAAGTTAGAGCTAGCTCTGACCGTGAAATGGTGTGGGATCAGCTAAGATCAAGCTCTTTCAAATTGAATGAAGAAATGATAGAGACATTGTTCGTTGTAAATACACCCAAACCGAATCCAAAGGAAACAACCCCACGCCCGGTTATTCCCTCACCTAAGCAAGAGAACAGAGTACTCGATCCTAAAAAGTCCCAGAATATTGCAATTTTGCTTAGGGCACTCAATGTGACCATAGAAGAAGTTTGTGAAGCGCTCATAGAAGGTAATGCAGATGCTCTTGGAACTGAATTACTTGAAAGTCTATTGAAGATGGCTCCAACCAAAGAAGAAGAGCGTAAGCTGAAGGAGTGCAAAGATGATTCACCGGTTAAGCTTGGCCCTGCTGAGAAATTTCTGAAAGAACTTCTTGATGTTCCTTTTGCATTTAAAAGGGTCGAGGCAATGCTTTACATGACTAATTTTGAATCTGAAATCGAATACCTGAAAAAGTCTTTCGAAACTCTAGAGGCTGCCTGTGAAGAATTGAGAAATAGTAGGATGTTCTTGAAGCTTTTAGAGGCTGTGCTCAAGACTGGAAACAGAATGAATGTTGGGACAAACCGCGGTGATGCCCATGCCTTCAAACTTGACACACTCCTCAAGCTTGCCGATGTTAAGGGAGCAGATGGGAAAACCACGCTTTTGCATTTTGTTGTACAAGAAATCATAAGAACTGAAGGTGCTCGTCTCATTGGTGGTCAAACTTCATCAAACACAGCTTTAAATGACGATGCCAAGTGTAGGAGACTTGGCCTGCCAGTTGTTTCAGGTCTCAGTTCAGACCTCACTAATGTCAAGAAAGCTGCTGCCATGGACTCCGATGTGCTTAGCGGTGAAGTTTTTAAGCTTTCTAGAGGTATTAGCAACATTGGGGAGGTTGTGCAATTAGCTGACAGAAAGGTGTCAGATGGAAGCAGCGGGAAATTTGCAGAGTCCATGACCATGTTCATGAAAATGGCCGAGGAGGAGATTATAAGACTTCAAGCTCAAGAAAGTGTTGCTCTGTCCTTGGTGAAGGAGATCACGGAGTACTTCCATGGGAATTCCGCCAGGGAAGAAGCTCATCCATTTCGAATCTTCATGGTAGTGAGAGACTTTCTGACAGTTCTTGATCGGGTATGTAAGGAAGTTGGTCTGATAAACGAGCGAACCATTGTTAGTAATGCCCAAAAGTTCCCAGTTCCAGTAAATCCCATGCTACAGCAACAAGTATTTCCAGTAAACCCAATGCTACCGCAAGTTCATCCCGTAAACCCAATGCTACCGCAAGTTCTCCCTGGAATCCATGGCAGGCGACCCTACGATTCATCCGATGATGAGAGTACGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003779 GO:0005488 GO:0005515 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0006996 GO:0007010 GO:0007015 GO:0008064 GO:0008092 GO:0008150 GO:0009987 GO:0010638 GO:0010639 GO:0016020 GO:0016043 GO:0030029 GO:0030036 GO:0030312 GO:0030832 GO:0030833 GO:0030834 GO:0030835 GO:0030837 GO:0030838 GO:0031333 GO:0031334 GO:0032271 GO:0032272 GO:0032273 GO:0032535 GO:0032956 GO:0032970 GO:0033043 GO:0043242 GO:0043244 GO:0043254 GO:0044087 GO:0044089 GO:0044464 GO:0044877 GO:0045010 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051015 GO:0051016 GO:0051128 GO:0051129 GO:0051130 GO:0051493 GO:0051494 GO:0051495 GO:0051693 GO:0065007 GO:0065008 GO:0071840 GO:0071944 GO:0090066 GO:0097435 GO:0110053 GO:1901879 GO:1901880 GO:1902903 GO:1902904 GO:1902905

KEGG Pathways

Metabolic & Signaling

ko04320 map04320

Pfam Domains

Protein Families

FH2

Protein Analysis

1112

Amino Acids

120.82

Weight (kDa)

6.71

Isoelectric Point (pI)

78.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FH2	PF02181	645 - 1040	7.1e-122	Formin Homology 2 Domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0007674)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G25500
fragaria_vesca	FvH4_2g17360 FvH4_2g17360 FvH4_2g17360
malus_domestica	MD05G1152500.v1.1 MD10G1147000.v1.1
prunus_persica	Prupe.8G185400_v2.0.a1
pyrus_communis	pycom05g14690 pycom10g12670
rosa_chinensis	RchiOBHm_Chr6g0281991
rosa_laevigata	RLG00000012921
rosa_multiflora	Rmu_sc0000569.1_g000001 Rmu_sc0001255.1_g000001 Rmu_sc0011823.1_g000001
rosa_roxburghii	Rroxscaffold_7G00186650
rosa_rugosa	Rorug06G0144700
rosa_samantha	Rh4CG162200 Rh4CG270300 Rh6AG257900 Rh6BG260900 Rh6CG259800 Rh6DG252200 Rh7AG416400
rosa_wichuraiana	Rw6G022300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2984
AarI	CACCTGC	1 cut(s)	322
AatII	GACGTC	1 cut(s)	899
Acc16I	TGCGCA	1 cut(s)	46
Acc36I	ACCTGC	1 cut(s)	322
AccB1I	GGYRCC	1 cut(s)	310
AccBSI	CCGCTC	1 cut(s)	510
AccI	GTMKAC	1 cut(s)	648
AccII	CGCG	7 cut(s)	594, 609, 621, 629, 838, 1328, 2574
AccIII	TCCGGA	2 cut(s)	534, 1135
AcoI	YGGCCR	5 cut(s)	258, 279, 1260, 1804, 2967
AcsI	RAATTY	4 cut(s)	919, 2360, 2933, 3052
AcuI	CTGAAG	5 cut(s)	186, 1374, 1455, 2333, 2706
AcyI	GRCGYC	2 cut(s)	896, 1064
AfaI	GTAC	5 cut(s)	173, 2145, 2667, 3041, 3334
AfeI	AGCGCT	1 cut(s)	2223
AflIII	ACRYGT	1 cut(s)	1326
AgeI	ACCGGT	1 cut(s)	2335
AhdI	GACNNNNNGTC	1 cut(s)	1785
AjnI	CCWGG	4 cut(s)	306, 1867, 3059, 3286
AjuI	GAANNNNNNNTTGG	2 cut(s)	93, 125
Alw21I	GWGCWC	6 cut(s)	617, 695, 905, 911, 2538, 2695
AlwNI	CAGNNNCTG	3 cut(s)	670, 708, 1030
Ama87I	CYCGRG	3 cut(s)	872, 1007, 1816
Aor13HI	TCCGGA	2 cut(s)	534, 1135
Aor51HI	AGCGCT	1 cut(s)	2223
ApaI	GGGCCC	1 cut(s)	526
ApoI	RAATTY	4 cut(s)	919, 2360, 2933, 3052
ArsI	GACNNNNNNTTYG	2 cut(s)	1565, 1597
AsiGI	ACCGGT	1 cut(s)	2335
AspLEI	GCGC	6 cut(s)	47, 362, 423, 609, 629, 2224
AspS9I	GGNCC	7 cut(s)	522, 523, 537, 658, 934, 1479, 2348
AsuC2I	CCSGG	6 cut(s)	257, 278, 937, 1259, 1264, 2111
AsuII	TTCGAA	4 cut(s)	1077, 1352, 2466, 3082
AsuNHI	GCTAGC	1 cut(s)	1982
AvaI	CYCGRG	3 cut(s)	872, 1007, 1816
AvaII	GGWCC	3 cut(s)	537, 658, 1479
BaeGI	GKGCMC	2 cut(s)	526, 2191
BalI	TGGCCA	1 cut(s)	1806
BamHI	GGATCC	2 cut(s)	75, 1567
BanI	GGYRCC	1 cut(s)	310
BanII	GRGCYC	4 cut(s)	526, 617, 1514, 1926
BauI	CACGAG	1 cut(s)	904
BbsI	GAAGAC	8 cut(s)	391, 906, 991, 1005, 1197, 1272, 1413, 1599
Bbv12I	GWGCWC	6 cut(s)	617, 695, 905, 911, 2538, 2695
BccI	CCATC	8 cut(s)	374, 997, 1105, 1243, 1469, 2275, 2630, 2912
BceAI	ACGGC	8 cut(s)	73, 338, 359, 368, 380, 396, 1051, 1171
BcgI	CGANNNNNNTGC	2 cut(s)	1160, 1194
BciT130I	CCWGG	4 cut(s)	308, 1869, 3061, 3288
BcnI	CCSGG	6 cut(s)	257, 278, 937, 1259, 1264, 2111
BfaI	CTAG	5 cut(s)	66, 1695, 1983, 2474, 2862
BfmI	CTRYAG	2 cut(s)	463, 3209
BfoI	RGCGCY	1 cut(s)	2225
BfuAI	ACCTGC	1 cut(s)	322
BlpI	GCTNAGC	2 cut(s)	1047, 2837
BmcAI	AGTACT	2 cut(s)	2145, 3041
Bme18I	GGWCC	3 cut(s)	537, 658, 1479
BmeRI	GACNNNNNGTC	1 cut(s)	1785
BmeT110I	CYCGRG	3 cut(s)	872, 1007, 1816
BmgT120I	GGNCC	7 cut(s)	522, 523, 537, 658, 934, 1479, 2348
BmrI	ACTGGG	2 cut(s)	1508, 3182
BmsI	GCATC	8 cut(s)	1250, 1529, 1633, 1655, 1707, 2233, 2569, 2731
BmtI	GCTAGC	1 cut(s)	1986
BmuI	ACTGGG	2 cut(s)	1508, 3182
BpiI	GAAGAC	8 cut(s)	391, 906, 991, 1005, 1197, 1272, 1413, 1599
BplI	GAGNNNNNCTC	2 cut(s)	764, 796
BpmI	CTGGAG	4 cut(s)	496, 647, 1145, 1809
Bpu10I	CCTNAGC	2 cut(s)	2127, 2183
Bpu1102I	GCTNAGC	2 cut(s)	1047, 2837
Bpu14I	TTCGAA	4 cut(s)	1077, 1352, 2466, 3082
BpuEI	CTTGAG	3 cut(s)	2522, 2594, 2982
BpuMI	CCSGG	6 cut(s)	257, 278, 937, 1259, 1264, 2111
Bsa29I	ATCGAT	1 cut(s)	1549
BsaAI	YACGTR	1 cut(s)	3336
BsaHI	GRCGYC	2 cut(s)	896, 1064
BsaI	GGTCTC	4 cut(s)	1272, 1813, 1882, 2786
BsaWI	WCCGGW	9 cut(s)	534, 724, 797, 923, 1135, 1426, 1489, 1615, 2335
BsaXI	ACNNNNNCTCC	4 cut(s)	275, 305, 1610, 1640
Bse118I	RCCGGY	7 cut(s)	69, 417, 539, 733, 931, 1111, 2335
Bse1I	ACTGG	9 cut(s)	688, 1128, 1514, 1889, 2548, 2768, 3188, 3194, 3227
Bse3DI	GCAATG	3 cut(s)	508, 1958, 2418
BseAI	TCCGGA	2 cut(s)	534, 1135
BseBI	CCWGG	4 cut(s)	308, 1869, 3061, 3288
BseCI	ATCGAT	1 cut(s)	1549
BseGI	GGATG	4 cut(s)	2514, 3073, 3253, 3317
BseMI	GCAATG	3 cut(s)	508, 1958, 2418
BseMII	CTCAG	4 cut(s)	715, 1038, 2346, 2797
BseNI	ACTGG	9 cut(s)	688, 1128, 1514, 1889, 2548, 2768, 3188, 3194, 3227
BseSI	GKGCMC	2 cut(s)	526, 2191
BseX3I	CGGCCG	1 cut(s)	1260
BsgI	GTGCAG	3 cut(s)	694, 1896, 1913
Bsh1236I	CGCG	7 cut(s)	594, 609, 621, 629, 838, 1328, 2574
Bsh1285I	CGRYCG	3 cut(s)	582, 1184, 1263
BshNI	GGYRCC	1 cut(s)	310
BshTI	ACCGGT	1 cut(s)	2335
BshVI	ATCGAT	1 cut(s)	1549
BsiEI	CGRYCG	3 cut(s)	582, 1184, 1263
BsiHKAI	GWGCWC	6 cut(s)	617, 695, 905, 911, 2538, 2695
BsiHKCI	CYCGRG	3 cut(s)	872, 1007, 1816
BslFI	GGGAC	3 cut(s)	667, 2146, 2578
BsmBI	CGTCTC	4 cut(s)	141, 741, 1335, 2702
BsmFI	GGGAC	3 cut(s)	667, 2146, 2578
Bso31I	GGTCTC	4 cut(s)	1272, 1813, 1882, 2786
BsoBI	CYCGRG	3 cut(s)	872, 1007, 1816
Bsp119I	TTCGAA	4 cut(s)	1077, 1352, 2466, 3082
Bsp120I	GGGCCC	1 cut(s)	522
Bsp13I	TCCGGA	2 cut(s)	534, 1135
Bsp1407I	TGTACA	1 cut(s)	2665
Bsp1720I	GCTNAGC	2 cut(s)	1047, 2837
Bsp19I	CCATGG	3 cut(s)	2820, 3046, 3295
BspCNI	CTCAG	4 cut(s)	714, 1039, 2347, 2796
BspDI	ATCGAT	1 cut(s)	1549
BspEI	TCCGGA	2 cut(s)	534, 1135
BspFNI	CGCG	7 cut(s)	594, 609, 621, 629, 838, 1328, 2574
BspHI	TCATGA	1 cut(s)	2958
BspMI	ACCTGC	1 cut(s)	322
BspOI	GCTAGC	1 cut(s)	1986
BspQI	GCTCTTC	2 cut(s)	1502, 2295
BspT104I	TTCGAA	4 cut(s)	1077, 1352, 2466, 3082
BspT107I	GGYRCC	1 cut(s)	310
BspTNI	GGTCTC	4 cut(s)	1272, 1813, 1882, 2786
BsrBI	CCGCTC	1 cut(s)	510
BsrDI	GCAATG	3 cut(s)	508, 1958, 2418
BsrFI	RCCGGY	7 cut(s)	69, 417, 539, 733, 931, 1111, 2335
BsrGI	TGTACA	1 cut(s)	2665
BsrI	ACTGG	9 cut(s)	688, 1128, 1514, 1889, 2548, 2768, 3188, 3194, 3227
BssAI	RCCGGY	7 cut(s)	69, 417, 539, 733, 931, 1111, 2335
BssNI	GRCGYC	2 cut(s)	896, 1064
BssSI	CACGAG	1 cut(s)	904
BssT1I	CCWWGG	4 cut(s)	2820, 3018, 3046, 3295
Bst2BI	CACGAG	1 cut(s)	904
Bst2UI	CCWGG	4 cut(s)	308, 1869, 3061, 3288
Bst4CI	ACNGT	6 cut(s)	580, 806, 1084, 1773, 1994, 3115
Bst6I	CTCTTC	5 cut(s)	114, 750, 765, 1502, 2295
BstACI	GRCGYC	2 cut(s)	896, 1064
BstAPI	GCANNNNNTGC	1 cut(s)	1030
BstAUI	TGTACA	1 cut(s)	2665
BstBAI	YACGTR	1 cut(s)	3336
BstBI	TTCGAA	4 cut(s)	1077, 1352, 2466, 3082
BstDSI	CCRYGG	6 cut(s)	592, 855, 2572, 2820, 3046, 3295
BstEII	GGTNACC	1 cut(s)	800
BstF5I	GGATG	4 cut(s)	2514, 3073, 3253, 3317
BstFNI	CGCG	7 cut(s)	594, 609, 621, 629, 838, 1328, 2574
BstH2I	RGCGCY	1 cut(s)	2225
BstHHI	GCGC	6 cut(s)	47, 362, 423, 609, 629, 2224
BstMCI	CGRYCG	3 cut(s)	582, 1184, 1263
BstNI	CCWGG	4 cut(s)	308, 1869, 3061, 3288
BstPI	GGTNACC	1 cut(s)	800
BstSFI	CTRYAG	2 cut(s)	463, 3209
BstSLI	GKGCMC	2 cut(s)	526, 2191
BstSNI	TACGTA	1 cut(s)	3336
BstUI	CGCG	7 cut(s)	594, 609, 621, 629, 838, 1328, 2574
BstV2I	GAAGAC	8 cut(s)	391, 906, 991, 1005, 1197, 1272, 1413, 1599
BstX2I	RGATCY	4 cut(s)	75, 467, 791, 1567
BstXI	CCANNNNNNTGG	1 cut(s)	1965
BstYI	RGATCY	4 cut(s)	75, 467, 791, 1567
BstZI	CGGCCG	1 cut(s)	1260
Bsu15I	ATCGAT	1 cut(s)	1549
BsuTUI	ATCGAT	1 cut(s)	1549
BtgI	CCRYGG	6 cut(s)	592, 855, 2572, 2820, 3046, 3295
BtgZI	GCGATG	2 cut(s)	364, 1506
BtsCI	GGATG	4 cut(s)	2514, 3073, 3253, 3317
BtsI	GCAGTG	1 cut(s)	1751
BtsIMutI	CAGTG	4 cut(s)	695, 976, 1751, 1896
BveI	ACCTGC	1 cut(s)	322
CaiI	CAGNNNCTG	3 cut(s)	670, 708, 1030
CciI	TCATGA	1 cut(s)	2958
CfoI	GCGC	6 cut(s)	47, 362, 423, 609, 629, 2224
Cfr10I	RCCGGY	7 cut(s)	69, 417, 539, 733, 931, 1111, 2335
Cfr13I	GGNCC	7 cut(s)	522, 523, 537, 658, 934, 1479, 2348
Cfr42I	CCGCGG	2 cut(s)	595, 2575
ClaI	ATCGAT	1 cut(s)	1549
CpoI	CGGWCCG	1 cut(s)	537
CseI	GACGC	3 cut(s)	1072, 1317, 1334
Csp6I	GTAC	5 cut(s)	172, 2144, 2666, 3040, 3333
CspAI	ACCGGT	1 cut(s)	2335
CspI	CGGWCCG	1 cut(s)	537
CviQI	GTAC	5 cut(s)	172, 2144, 2666, 3040, 3333
DraI	TTTAAA	2 cut(s)	2398, 2733
DriI	GACNNNNNGTC	1 cut(s)	1785
EaeI	YGGCCR	5 cut(s)	258, 279, 1260, 1804, 2967
EagI	CGGCCG	1 cut(s)	1260
Eam1104I	CTCTTC	5 cut(s)	114, 750, 765, 1502, 2295
Eam1105I	GACNNNNNGTC	1 cut(s)	1785
EarI	CTCTTC	5 cut(s)	114, 750, 765, 1502, 2295
EciI	GGCGGA	7 cut(s)	88, 111, 129, 361, 382, 1734, 3046
Ecl136II	GAGCTC	1 cut(s)	615
EclXI	CGGCCG	1 cut(s)	1260
Eco105I	TACGTA	1 cut(s)	3336
Eco130I	CCWWGG	4 cut(s)	2820, 3018, 3046, 3295
Eco147I	AGGCCT	1 cut(s)	1849
Eco24I	GRGCYC	4 cut(s)	526, 617, 1514, 1926
Eco31I	GGTCTC	4 cut(s)	1272, 1813, 1882, 2786
Eco47I	GGWCC	3 cut(s)	537, 658, 1479
Eco47III	AGCGCT	1 cut(s)	2223
Eco52I	CGGCCG	1 cut(s)	1260
Eco53kI	GAGCTC	1 cut(s)	615
Eco57I	CTGAAG	5 cut(s)	186, 1374, 1455, 2333, 2706
Eco88I	CYCGRG	3 cut(s)	872, 1007, 1816
Eco91I	GGTNACC	1 cut(s)	800
EcoICRI	GAGCTC	1 cut(s)	615
EcoO109I	RGGNCCY	1 cut(s)	522
EcoO65I	GGTNACC	1 cut(s)	800
EcoRI	GAATTC	1 cut(s)	3052
EcoRII	CCWGG	4 cut(s)	306, 1867, 3059, 3286
EcoT14I	CCWWGG	4 cut(s)	2820, 3018, 3046, 3295
EcoT22I	ATGCAT	1 cut(s)	1648
EcoT38I	GRGCYC	4 cut(s)	526, 617, 1514, 1926
ErhI	CCWWGG	4 cut(s)	2820, 3018, 3046, 3295
Esp3I	CGTCTC	4 cut(s)	141, 741, 1335, 2702
FalI	AAGNNNNNCTT	4 cut(s)	93, 125, 2361, 2393
FaqI	GGGAC	3 cut(s)	667, 2146, 2578
FauI	CCCGC	7 cut(s)	238, 243, 512, 515, 599, 692, 2921
FblI	GTMKAC	1 cut(s)	648
FokI	GGATG	4 cut(s)	2521, 3060, 3240, 3304
FriOI	GRGCYC	4 cut(s)	526, 617, 1514, 1926
FspBI	CTAG	5 cut(s)	66, 1695, 1983, 2474, 2862
FspI	TGCGCA	1 cut(s)	46
GlaI	GCGC	6 cut(s)	46, 361, 422, 608, 628, 2223
GsuI	CTGGAG	4 cut(s)	496, 647, 1145, 1809
HaeII	RGCGCY	1 cut(s)	2225
HgaI	GACGC	3 cut(s)	1072, 1317, 1334
HhaI	GCGC	6 cut(s)	47, 362, 423, 609, 629, 2224
Hin1I	GRCGYC	2 cut(s)	896, 1064
Hin6I	GCGC	6 cut(s)	45, 360, 421, 607, 627, 2222
HinP1I	GCGC	6 cut(s)	45, 360, 421, 607, 627, 2222
HincII	GTYRAC	2 cut(s)	586, 649
HindII	GTYRAC	2 cut(s)	586, 649
HindIII	AAGCTT	6 cut(s)	811, 1386, 2342, 2519, 2612, 2855
Hpy166II	GTNNAC	5 cut(s)	586, 649, 929, 3232, 3262
Hpy8I	GTNNAC	5 cut(s)	586, 649, 929, 3232, 3262
HpyCH4III	ACNGT	6 cut(s)	580, 806, 1084, 1773, 1994, 3115
HpyCH4IV	ACGT	2 cut(s)	896, 3335
HpySE526I	ACGT	2 cut(s)	896, 3335
Hsp92I	GRCGYC	2 cut(s)	896, 1064
HspAI	GCGC	6 cut(s)	45, 360, 421, 607, 627, 2222
Kpn2I	TCCGGA	2 cut(s)	534, 1135
KroI	GCCGGC	2 cut(s)	69, 417
KroNI	GCCGGC	2 cut(s)	71, 419
KspI	CCGCGG	2 cut(s)	595, 2575
LguI	GCTCTTC	2 cut(s)	1502, 2295
LweI	GCATC	8 cut(s)	1250, 1529, 1633, 1655, 1707, 2233, 2569, 2731
MaeI	CTAG	5 cut(s)	66, 1695, 1983, 2474, 2862
MaeII	ACGT	2 cut(s)	896, 3335
MaeIII	GTNAC	6 cut(s)	93, 704, 800, 939, 1485, 2197
MbiI	CCGCTC	1 cut(s)	510
MflI	RGATCY	4 cut(s)	75, 467, 791, 1567
MlsI	TGGCCA	1 cut(s)	1806
MluI	ACGCGT	1 cut(s)	1326
MluNI	TGGCCA	1 cut(s)	1806
MlyI	GAGTC	7 cut(s)	644, 1019, 1204, 1774, 1930, 2819, 2951
MmeI	TCCRAC	3 cut(s)	345, 612, 2312
Mox20I	TGGCCA	1 cut(s)	1806
Mph1103I	ATGCAT	1 cut(s)	1648
MreI	CGCCGGCG	1 cut(s)	417
MroI	TCCGGA	2 cut(s)	534, 1135
MroNI	GCCGGC	2 cut(s)	69, 417
MscI	TGGCCA	1 cut(s)	1806
MseI	TTAA	7 cut(s)	1701, 1952, 2340, 2397, 2625, 2732, 2853
MslI	CAYNNNNRTG	4 cut(s)	2951, 2957, 2963, 3095
Msp20I	TGGCCA	1 cut(s)	1806
MspA1I	CMGCKG	9 cut(s)	519, 594, 670, 679, 1046, 1802, 1897, 2574, 2928
MvaI	CCWGG	4 cut(s)	308, 1869, 3061, 3288
MvnI	CGCG	7 cut(s)	594, 609, 621, 629, 838, 1328, 2574
NaeI	GCCGGC	2 cut(s)	71, 419
NciI	CCSGG	6 cut(s)	257, 278, 937, 1259, 1264, 2111
NcoI	CCATGG	3 cut(s)	2820, 3046, 3295
NgoMIV	GCCGGC	2 cut(s)	69, 417
NheI	GCTAGC	1 cut(s)	1982
NmeAIII	GCCGAG	4 cut(s)	552, 810, 1173, 2995
NmuCI	GTSAC	4 cut(s)	800, 939, 1485, 2197
NsbI	TGCGCA	1 cut(s)	46
NsiI	ATGCAT	1 cut(s)	1648
NspV	TTCGAA	4 cut(s)	1077, 1352, 2466, 3082
PaeR7I	CTCGAG	2 cut(s)	872, 1816
PagI	TCATGA	1 cut(s)	2958
PaqCI	CACCTGC	1 cut(s)	322
PasI	CCCWGGG	1 cut(s)	1868
PceI	AGGCCT	1 cut(s)	1849
PciSI	GCTCTTC	2 cut(s)	1502, 2295
PcsI	WCGNNNNNNNCGW	6 cut(s)	393, 579, 606, 902, 1349, 3318
PdiI	GCCGGC	2 cut(s)	71, 419
PinAI	ACCGGT	1 cut(s)	2335
PleI	GAGTC	7 cut(s)	644, 1018, 1203, 1774, 1930, 2819, 2950
PpsI	GAGTC	7 cut(s)	644, 1018, 1203, 1774, 1930, 2819, 2950
Ppu21I	YACGTR	1 cut(s)	3336
PsiI	TTATAA	1 cut(s)	2984
Psp124BI	GAGCTC	1 cut(s)	617
Psp6I	CCWGG	4 cut(s)	306, 1867, 3059, 3286
PspEI	GGTNACC	1 cut(s)	800
PspGI	CCWGG	4 cut(s)	306, 1867, 3059, 3286
PspOMI	GGGCCC	1 cut(s)	522
PspPI	GGNCC	7 cut(s)	522, 523, 537, 658, 934, 1479, 2348
PstNI	CAGNNNCTG	3 cut(s)	670, 708, 1030
PsuI	RGATCY	4 cut(s)	75, 467, 791, 1567
PvuII	CAGCTG	3 cut(s)	1046, 1802, 1897
RsaI	GTAC	5 cut(s)	173, 2145, 2667, 3041, 3334
RsaNI	GTAC	5 cut(s)	172, 2144, 2666, 3040, 3333
RseI	CAYNNNNRTG	4 cut(s)	2951, 2957, 2963, 3095
Rsr2I	CGGWCCG	1 cut(s)	537
RsrII	CGGWCCG	1 cut(s)	537
SacI	GAGCTC	1 cut(s)	617
SacII	CCGCGG	2 cut(s)	595, 2575
SalI	GTCGAC	1 cut(s)	647
SapI	GCTCTTC	2 cut(s)	1502, 2295
SaqAI	TTAA	7 cut(s)	1701, 1952, 2340, 2397, 2625, 2732, 2853
Sau96I	GGNCC	7 cut(s)	522, 523, 537, 658, 934, 1479, 2348
ScaI	AGTACT	2 cut(s)	2145, 3041
SchI	GAGTC	7 cut(s)	644, 1019, 1204, 1774, 1930, 2819, 2951
SfaNI	GCATC	8 cut(s)	1250, 1529, 1633, 1655, 1707, 2233, 2569, 2731
SfcI	CTRYAG	2 cut(s)	463, 3209
Sfr274I	CTCGAG	2 cut(s)	872, 1816
Sfr303I	CCGCGG	2 cut(s)	595, 2575
SfuI	TTCGAA	4 cut(s)	1077, 1352, 2466, 3082
SgrAI	CRCCGGYG	2 cut(s)	417, 1111
SgrBI	CCGCGG	2 cut(s)	595, 2575
SinI	GGWCC	3 cut(s)	537, 658, 1479
SlaI	CTCGAG	2 cut(s)	872, 1816
SmiMI	CAYNNNNRTG	4 cut(s)	2951, 2957, 2963, 3095
SmlI	CTYRAG	5 cut(s)	872, 1816, 2537, 2609, 2997
SmoI	CTYRAG	5 cut(s)	872, 1816, 2537, 2609, 2997
SnaBI	TACGTA	1 cut(s)	3336
SseBI	AGGCCT	1 cut(s)	1849
SspI	AATATT	1 cut(s)	2170
SspMI	CTAG	5 cut(s)	66, 1695, 1983, 2474, 2862
SstI	GAGCTC	1 cut(s)	617
StuI	AGGCCT	1 cut(s)	1849
StyI	CCWWGG	4 cut(s)	2820, 3018, 3046, 3295
TaaI	ACNGT	6 cut(s)	580, 806, 1084, 1773, 1994, 3115
TaiI	ACGT	2 cut(s)	899, 3338
TaqII	GACCGA	2 cut(s)	1170, 1333
TatI	WGTACW	3 cut(s)	2143, 2665, 3039
TauI	GCSGC	7 cut(s)	365, 624, 627, 670, 676, 679, 1111
Tru1I	TTAA	7 cut(s)	1701, 1952, 2340, 2397, 2625, 2732, 2853
Tru9I	TTAA	7 cut(s)	1701, 1952, 2340, 2397, 2625, 2732, 2853
TscAI	CASTG	4 cut(s)	695, 976, 1758, 1896
TseFI	GTSAC	4 cut(s)	800, 939, 1485, 2197
Tsp45I	GTSAC	4 cut(s)	800, 939, 1485, 2197
TspGWI	ACGGA	3 cut(s)	123, 844, 3050
TspRI	CASTG	4 cut(s)	695, 976, 1758, 1896
VpaK11BI	GGWCC	3 cut(s)	537, 658, 1479
XapI	RAATTY	4 cut(s)	919, 2360, 2933, 3052
XbaI	TCTAGA	3 cut(s)	1694, 2473, 2861
XhoI	CTCGAG	2 cut(s)	872, 1816
XmiI	GTMKAC	1 cut(s)	648
XspI	CTAG	5 cut(s)	66, 1695, 1983, 2474, 2862
ZraI	GACGTC	1 cut(s)	897
ZrmI	AGTACT	2 cut(s)	2145, 3041
Zsp2I	ATGCAT	1 cut(s)	1648

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.