Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0007674

Physical Location & Seq

Genomic Coordinates Forward (+)

14992549 .. 14996967

Gene Structure 4419 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g17360.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3327 bp

ATGCCCTCCTCCTCCTCCTTCTTCTTCCTCCTCCTCTTCTTATTCTGCTCGCCACCCTTTGTAGCCCCTCACCGGAGGATCCTCCACCAGCCCCTTTTACCCCAAGACTCTCTTCCTCCTGCTTCCCCTCCCGCCCCTTCTCCCCCTTCTCTCCCTCCCAACCCCAACCCCAACCCCAACCCCAAGTACCCTTTTTCCTCTTCCAATTCTACCCCTACAGATTCCCCATTTTTCCCAACCTACCCCGCCCCGCCTCCTCCTCCGCCTTCCCCCGCCACCTTCGCCTCCTTCCCCGCCAACATCTCCTCCCTCATTCTCCCCCAGACCCCTTCCTCCCACTCCAAGTCCCACAAGCTCATCGCCCTCGCCGTCTGCGCCGTCATCTCCTCCGTCGTCGCCGTCTCCGCCGCCGCCTTCGTCCTCTGCCGCCGCCGCCGCAACAACAACCGCAACTTCCCGGACGACGACGACAAGACGTTCAGATCCGACCTTAACCACAGCAGCCGCCTCTTCCAGGCCAGCAGCAATGCCCGCTCCAGCAGCGGGACCCACAAGCTCCGCCCCGGCTCCTCCACCAGCTCCGAGTTCCTCTACCTCGGCACGCTCGTCAACTCCCGCGGAATCGACGAGCGCGTGAGCTCACGCGCGTTGGAGAGTGGTCGGAAGGTCGACTCGCCGGACCTCCAGCCGCTCCCGCCGCTGTCCCGGCAGTGCTCCAAGCTCAGTAACTGCACCAATGCCGAACCGGCCCGGACCGGCGACGACGAAGACGAGGAGGAAGAAGAAGAGTTCTACTCGCCGAGAGGATCTTCCGGCGGCCGTGAAAGCTTCAATGGAGCTGGATCAGGATCCCGGAGAATATTCGCCGCCGGTGATCTCGAGGAAAGAATCAGCGAAACGACGTCGTGTTCATGCTCCTCTTCGAATTCCGGTTCACCGGCTCGGTCACAGTCTATTAGTCTATCTCCGGCGGTTAGTTTAAGTCCCAGAAGACCATCACTTCCTAAATCTCCGGAGTCTTCTGTTATGCAGCCTTTGCCTACACAGGCATTGCGAGCTGAGCCTCATTATCCGACGCCATTTGGTTTCGAAACGGTGTCTTCTTCGCCGCCGGTGAGAGCGCTGGAGAATGTTCCGGAATCCTCGCCGAGAAGGTCGAGCGTTTCGCAGCAGAATCTGCGGTCGCCTTCGTTGAGTCCAATGTCCTCACCGGAGAGAGCTGCACCTGCATCGGATCAAATCCCGGCGCCGTCTCCTTCATTGTCTTCACTTTCTTCGTCACCGGAGAGAGATTTGGAGAAGGAGGCATCTCCAAAAGTATTGCTATTTTCTTTGCCTCCAAAAGCTTCGGCGTTTTCACCGTCTTCAAGTTGCACATCGTCGCCAGATAGATTATCAAATGCTGCTTCTGATGAAAAGGCCAAGTCTCCTTCCATATCACCAGAGAGAGGTTTAGAGAAGAGCCCAGTTGCATCGCCAAGAACTTCAAATGCTTCTGATCGATCATTTATTCATTTGGATCCAAAGAGGCAGTCTTTTTCATCTTCTTCAGAGTCATCTTCGCCGGAGAGAGAGTTGGGGAACAATTCAGATGCATCACCAAAAGTCTCCAGTGTTTCTAATCACATTGAAGAACCTCCAGCTAGACTTAATGGTGCTTTGAAGATGCCTCTTTTGATACCGCCACCTCCTCCTCCGCCACTCCCCCCTTCACTAAGACTGTGGGAGACTCCAAGTCCTAAAACACCAGCTGGCCAACCAATCTCTAGACCTCCTGCTCTTATACCTCCTTCAAGGCCTTTTGTGTTTCAAACCCCAGGAGGGGTCTCTGTTTCGCCAGTGGAGCTGCCGCCGAGTTCTGCACCATTGGAGACTATTGAGGAGATTCCGAAACCCAAGTTAAAGCCATTGCATTGGGATAAAGTTAGAGCAAGCTCTGACCGTGAAATGGTGTGGGATCAGCTAAGATCAAGCTCTTTCAAATTGAATGAAGAAATGATAGAGACGTTGTTCGTTGTAAATACACCCAAACCAAATCCAAAGGAAACAACCCCACGCTCAGTTATTCTGTCACCTAAGCAAGAGAACAGAGTACTCGATCCTAAAAAGTCCCAGAACATTGCAATCTTGCTTAGGGCACTCAATGTGACCACAGAAGAAGTTTGTGAAGCGCTCTTAGAAGGTAATGCAGATGCTCTTGGAACAGAATTACTTGAAAGTCTACTGAAGATGGCTCCAACCAAAGAAGAAGAGCGTAAGCTGAAGGATTTCAAAGATGACTCACCAGTTAAGCTTGGCCCTGCTGAGAAATTTCTGAAAGAACTGCTTGATGTTCCTTTTGCATTCAAACGTGTTGAGGCAATGCTTTACATGACTAATTTTGAATCTGAAATTGAATACCTAAAAAAGTCTTTTGAAACGCTAGAGGCTGCCTGTGAAGAATTGAGAAATAGTAGGATGTTCTTGAAGCTTTTAGAGGCTGTGCTCAAGACTGGAAACAGAATGAACGTTGGGACAAACCGCGGTGATGCCCATGCCTTCAAACTTGATACACTCCTCAAGCTCGCTGACGTTAAGGGAGCAGATGGGAAAACTACGCTCTTGCATTTTGTCGTACAAGAAATCATAAGAACTGAAGGTGCTCGTCTCGTTGCTGGTCAATCTTCTTCAAACACAGCTTTGAACGATGATGCCAAGTGTAGGAGACTTGGTCTGCCAGTTGTTTCAGGTCTCAGTTCAGACCTCACTAATGTGAAGAAAGCTGCTGCCATGGACTCTGATGTGCTTAGCGGTGAAGTTTCCAAGCTTTCTAGAGGAATTAGCAACATTGGGGAGGTTGTGCAATTAACTGAGACAACGGTCTCAGATGGAAGCAGCAGGAAATTTGCAGAGTCCATGACCATGTTCATGAAAATGGCCGAGGAGGAGATTATAAGACTTCAAGCTCAAGAAAGTGTTGCTTTGTCCTTGGTGAAGGAGATCACGGAGTACTTCCATGGGAACTCCGCTAGGGAAGAAGCTCACCCATTTCGAATCTTCATGGTAGTCAGAGACTTTCTAACAGTTCTTGATCGGGTATGCAAAGAAGTTGGTCTGATCAACAAGCGAACCATTGTTAGTAATGCCCAAAAGTTTCCAGTTCCAGTAAACCCCATGCTACAACAACACGTCTATCCAGTAAACCCAATGCTACCGCAAGTTCTTCCTGTAAATCCAATGCTACCGCAAGTTCTACCTGTAAACCCAATGCTGCCCCATGTTCTTCCTGGAATCCATGGAAGGCGACCCTACGATTCATCCGATGATGAGAGTACGTCATCTCCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003779 GO:0005488 GO:0005515 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0006996 GO:0007010 GO:0007015 GO:0008064 GO:0008092 GO:0008150 GO:0009987 GO:0010638 GO:0010639 GO:0016020 GO:0016043 GO:0030029 GO:0030036 GO:0030312 GO:0030832 GO:0030833 GO:0030834 GO:0030835 GO:0030837 GO:0030838 GO:0031333 GO:0031334 GO:0032271 GO:0032272 GO:0032273 GO:0032535 GO:0032956 GO:0032970 GO:0033043 GO:0043242 GO:0043244 GO:0043254 GO:0044087 GO:0044089 GO:0044464 GO:0044877 GO:0045010 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051015 GO:0051016 GO:0051128 GO:0051129 GO:0051130 GO:0051493 GO:0051494 GO:0051495 GO:0051693 GO:0065007 GO:0065008 GO:0071840 GO:0071944 GO:0090066 GO:0097435 GO:0110053 GO:1901879 GO:1901880 GO:1902903 GO:1902904 GO:1902905

KEGG Pathways

Metabolic & Signaling

ko04320 map04320

Pfam Domains

Protein Families

FH2

Protein Analysis

1109

Amino Acids

120.38

Weight (kDa)

7.01

Isoelectric Point (pI)

80.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FH2	PF02181	630 - 809	2e-54	Formin Homology 2 Domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007674)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G25500
fragaria_vesca	FvH4_2g17360 FvH4_2g17360 FvH4_2g17360
malus_domestica	MD05G1152500.v1.1 MD10G1147000.v1.1
prunus_persica	Prupe.8G185400_v2.0.a1
pyrus_communis	pycom05g14690 pycom10g12670
rosa_chinensis	RchiOBHm_Chr6g0281991
rosa_laevigata	RLG00000012921
rosa_multiflora	Rmu_sc0000569.1_g000001 Rmu_sc0001255.1_g000001 Rmu_sc0011823.1_g000001
rosa_roxburghii	Rroxscaffold_7G00186650
rosa_rugosa	Rorug06G0144700
rosa_samantha	Rh4CG162200 Rh4CG270300 Rh6AG257900 Rh6BG260900 Rh6CG259800 Rh6DG252200 Rh7AG416400
rosa_wichuraiana	Rw6G022300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2933
AarI	CACCTGC	1 cut(s)	1234
AatII	GACGTC	1 cut(s)	905
Acc36I	ACCTGC	1 cut(s)	1234
AccB1I	GGYRCC	1 cut(s)	1246
AccBSI	CCGCTC	2 cut(s)	534, 691
AccI	GTMKAC	2 cut(s)	669, 2221
AccII	CGCG	5 cut(s)	618, 633, 645, 647, 2523
AccIII	TCCGGA	2 cut(s)	1012, 1135
AclI	AACGTT	1 cut(s)	2508
AcoI	YGGCCR	3 cut(s)	817, 1753, 2916
AcsI	RAATTY	3 cut(s)	925, 2309, 2882
AcuI	CTGAAG	4 cut(s)	1533, 2246, 2282, 2655
AcyI	GRCGYC	3 cut(s)	902, 1076, 1247
AfaI	GTAC	5 cut(s)	188, 2094, 2616, 2990, 3313
AfeI	AGCGCT	2 cut(s)	1122, 2172
AfiI	CCNNNNNNNGG	8 cut(s)	72, 514, 543, 1448, 1821, 1822, 1948, 2700
AflIII	ACRYGT	2 cut(s)	2350, 3166
AhdI	GACNNNNNGTC	1 cut(s)	1734
AjiI	CACGTC	1 cut(s)	3169
AjnI	CCWGG	3 cut(s)	513, 1816, 3265
AjuI	GAANNNNNNNTTGG	2 cut(s)	96, 128
AleI	CACNNNNGTG	1 cut(s)	2750
Alw21I	GWGCWC	4 cut(s)	641, 716, 2487, 2644
AlwNI	CAGNNNCTG	2 cut(s)	729, 1177
Ama87I	CYCGRG	1 cut(s)	878
Aor13HI	TCCGGA	2 cut(s)	1012, 1135
Aor51HI	AGCGCT	2 cut(s)	1122, 2172
AoxI	GGCC	8 cut(s)	516, 747, 817, 1419, 1753, 1796, 2296, 2916
ApoI	RAATTY	3 cut(s)	925, 2309, 2882
ArsI	GACNNNNNNTTYG	2 cut(s)	1517, 1549
Asp700I	GAANNNNTTC	1 cut(s)	2267
AspLEI	GCGC	6 cut(s)	377, 633, 647, 1123, 1249, 2173
AspS9I	GGNCC	5 cut(s)	546, 679, 748, 753, 2297
AsuC2I	CCSGG	6 cut(s)	458, 564, 706, 751, 853, 1244
AsuII	TTCGAA	3 cut(s)	923, 1089, 3031
AvaI	CYCGRG	1 cut(s)	878
AvaII	GGWCC	3 cut(s)	546, 679, 753
BaeGI	GKGCMC	1 cut(s)	2140
BalI	TGGCCA	1 cut(s)	1755
BamHI	GGATCC	3 cut(s)	78, 848, 1519
BanI	GGYRCC	1 cut(s)	1246
BanII	GRGCYC	2 cut(s)	641, 1466
BbsI	GAAGAC	6 cut(s)	774, 997, 1011, 1092, 1257, 1356
Bbv12I	GWGCWC	4 cut(s)	641, 716, 2487, 2644
BccI	CCATC	4 cut(s)	1003, 2224, 2579, 2861
BceAI	ACGGC	5 cut(s)	353, 362, 383, 804, 1234
BcgI	CGANNNNNNTGC	2 cut(s)	1212, 1246
BciT130I	CCWGG	3 cut(s)	515, 1818, 3267
BclI	TGATCA	1 cut(s)	3096
BcnI	CCSGG	6 cut(s)	458, 564, 706, 751, 853, 1244
BfaI	CTAG	6 cut(s)	1644, 1767, 2423, 2811, 3009, 3325
BfmI	CTRYAG	1 cut(s)	216
BfoI	RGCGCY	3 cut(s)	1124, 1250, 2174
BfuAI	ACCTGC	1 cut(s)	1234
BglI	GCCNNNNNGGC	1 cut(s)	746
BlpI	GCTNAGC	2 cut(s)	1059, 2786
BmcAI	AGTACT	2 cut(s)	2094, 2990
Bme1390I	CCNGG	9 cut(s)	458, 515, 564, 706, 751, 853, 1244, 1818, 3267
Bme18I	GGWCC	3 cut(s)	546, 679, 753
BmeRI	GACNNNNNGTC	1 cut(s)	1734
BmeT110I	CYCGRG	1 cut(s)	878
BmgBI	CACGTC	1 cut(s)	3169
BmgT120I	GGNCC	5 cut(s)	546, 679, 748, 753, 2297
BmiI	GGNNCC	8 cut(s)	80, 547, 548, 568, 850, 1248, 1521, 2235
BmrFI	CCNGG	9 cut(s)	458, 515, 564, 706, 751, 853, 1244, 1818, 3267
BmrI	ACTGGG	1 cut(s)	1460
BmsI	GCATC	9 cut(s)	1238, 1316, 1481, 1582, 1604, 1656, 2182, 2518, 2680
BmuI	ACTGGG	1 cut(s)	1460
BoxI	GACNNNNGTC	1 cut(s)	2858
BpiI	GAAGAC	6 cut(s)	774, 997, 1011, 1092, 1257, 1356
BplI	GAGNNNNNCTC	2 cut(s)	779, 811
BpmI	CTGGAG	5 cut(s)	520, 668, 1145, 1594, 1623
Bpu10I	CCTNAGC	2 cut(s)	2076, 2132
Bpu1102I	GCTNAGC	2 cut(s)	1059, 2786
Bpu14I	TTCGAA	3 cut(s)	923, 1089, 3031
BpuEI	CTTGAG	3 cut(s)	2471, 2543, 2931
BpuMI	CCSGG	6 cut(s)	458, 564, 706, 751, 853, 1244
Bsa29I	ATCGAT	1 cut(s)	1501
BsaBI	GATNNNNATC	1 cut(s)	847
BsaHI	GRCGYC	3 cut(s)	902, 1076, 1247
BsaI	GGTCTC	3 cut(s)	1831, 2735, 2866
BsaWI	WCCGGW	6 cut(s)	72, 929, 1012, 1135, 1210, 1282
BsaXI	ACNNNNNCTCC	7 cut(s)	290, 320, 1559, 1589, 2695, 2725, 3304
Bsc4I	CCNNNNNNNGG	8 cut(s)	72, 514, 543, 1448, 1821, 1822, 1948, 2700
Bse118I	RCCGGY	5 cut(s)	745, 755, 869, 937, 1111
Bse1I	ACTGG	9 cut(s)	1466, 1611, 1838, 2285, 2497, 2717, 3137, 3143, 3176
Bse3DI	GCAATG	5 cut(s)	532, 1049, 1907, 2118, 2367
Bse8I	GATNNNNATC	1 cut(s)	847
BseAI	TCCGGA	2 cut(s)	1012, 1135
BseBI	CCWGG	3 cut(s)	515, 1818, 3267
BseCI	ATCGAT	1 cut(s)	1501
BseGI	GGATG	2 cut(s)	2463, 3296
BseJI	GATNNNNATC	1 cut(s)	847
BseLI	CCNNNNNNNGG	8 cut(s)	72, 514, 543, 1448, 1821, 1822, 1948, 2700
BseMI	GCAATG	5 cut(s)	532, 1049, 1907, 2118, 2367
BseMII	CTCAG	7 cut(s)	736, 1050, 2073, 2295, 2746, 2841, 2877
BseNI	ACTGG	9 cut(s)	1466, 1611, 1838, 2285, 2497, 2717, 3137, 3143, 3176
BseSI	GKGCMC	1 cut(s)	2140
BseX3I	CGGCCG	1 cut(s)	817
BsgI	GTGCAG	3 cut(s)	715, 1206, 1845
Bsh1236I	CGCG	5 cut(s)	618, 633, 645, 647, 2523
Bsh1285I	CGRYCG	2 cut(s)	820, 1184
BshFI	GGCC	8 cut(s)	518, 749, 819, 1421, 1755, 1798, 2298, 2918
BshNI	GGYRCC	1 cut(s)	1246
BshVI	ATCGAT	1 cut(s)	1501
BsiEI	CGRYCG	2 cut(s)	820, 1184
BsiHKAI	GWGCWC	4 cut(s)	641, 716, 2487, 2644
BsiHKCI	CYCGRG	1 cut(s)	878
BslFI	GGGAC	6 cut(s)	331, 559, 688, 969, 2095, 2527
BslI	CCNNNNNNNGG	8 cut(s)	72, 514, 543, 1448, 1821, 1822, 1948, 2700
BsmBI	CGTCTC	4 cut(s)	406, 1257, 1997, 2651
BsmFI	GGGAC	6 cut(s)	331, 559, 688, 969, 2095, 2527
BsmI	GAATGC	1 cut(s)	2342
BsnI	GGCC	8 cut(s)	518, 749, 819, 1421, 1755, 1798, 2298, 2918
Bso31I	GGTCTC	3 cut(s)	1831, 2735, 2866
BsoBI	CYCGRG	1 cut(s)	878
Bsp119I	TTCGAA	3 cut(s)	923, 1089, 3031
Bsp1286I	GDGCHC	6 cut(s)	641, 716, 1466, 2140, 2487, 2644
Bsp13I	TCCGGA	2 cut(s)	1012, 1135
Bsp1720I	GCTNAGC	2 cut(s)	1059, 2786
Bsp19I	CCATGG	3 cut(s)	2769, 2995, 3274
BspANI	GGCC	8 cut(s)	518, 749, 819, 1421, 1755, 1798, 2298, 2918
BspCNI	CTCAG	7 cut(s)	735, 1051, 2072, 2296, 2745, 2842, 2876
BspDI	ATCGAT	1 cut(s)	1501
BspEI	TCCGGA	2 cut(s)	1012, 1135
BspFNI	CGCG	5 cut(s)	618, 633, 645, 647, 2523
BspHI	TCATGA	1 cut(s)	2907
BspLI	GGNNCC	8 cut(s)	80, 547, 548, 568, 850, 1248, 1521, 2235
BspMI	ACCTGC	1 cut(s)	1234
BspQI	GCTCTTC	2 cut(s)	1454, 2244
BspT104I	TTCGAA	3 cut(s)	923, 1089, 3031
BspT107I	GGYRCC	1 cut(s)	1246
BspTNI	GGTCTC	3 cut(s)	1831, 2735, 2866
BsrBI	CCGCTC	2 cut(s)	534, 691
BsrDI	GCAATG	5 cut(s)	532, 1049, 1907, 2118, 2367
BsrFI	RCCGGY	5 cut(s)	745, 755, 869, 937, 1111
BsrI	ACTGG	9 cut(s)	1466, 1611, 1838, 2285, 2497, 2717, 3137, 3143, 3176
BssAI	RCCGGY	5 cut(s)	745, 755, 869, 937, 1111
BssNI	GRCGYC	3 cut(s)	902, 1076, 1247
BssT1I	CCWWGG	4 cut(s)	2769, 2967, 2995, 3274
Bst2UI	CCWGG	3 cut(s)	515, 1818, 3267
Bst4CI	ACNGT	7 cut(s)	951, 1096, 1362, 1722, 1943, 2860, 3064
Bst6I	CTCTTC	8 cut(s)	41, 117, 205, 515, 780, 925, 1454, 2244
BstACI	GRCGYC	3 cut(s)	902, 1076, 1247
BstAPI	GCANNNNNTGC	2 cut(s)	1036, 1177
BstBI	TTCGAA	3 cut(s)	923, 1089, 3031
BstC8I	GCNNGC	8 cut(s)	50, 520, 532, 602, 1056, 1753, 1933, 2565
BstDSI	CCRYGG	5 cut(s)	616, 2521, 2769, 2995, 3274
BstENI	CCTNNNNNAGG	1 cut(s)	512
BstF5I	GGATG	2 cut(s)	2463, 3296
BstFNI	CGCG	5 cut(s)	618, 633, 645, 647, 2523
BstH2I	RGCGCY	3 cut(s)	1124, 1250, 2174
BstHHI	GCGC	6 cut(s)	377, 633, 647, 1123, 1249, 2173
BstMCI	CGRYCG	2 cut(s)	820, 1184
BstNI	CCWGG	3 cut(s)	515, 1818, 3267
BstPAI	GACNNNNGTC	1 cut(s)	2858
BstSCI	CCNGG	9 cut(s)	456, 513, 562, 704, 749, 851, 1242, 1816, 3265
BstSFI	CTRYAG	1 cut(s)	216
BstSLI	GKGCMC	1 cut(s)	2140
BstUI	CGCG	5 cut(s)	618, 633, 645, 647, 2523
BstV2I	GAAGAC	6 cut(s)	774, 997, 1011, 1092, 1257, 1356
BstX2I	RGATCY	5 cut(s)	78, 482, 806, 848, 1519
BstXI	CCANNNNNNTGG	1 cut(s)	1914
BstYI	RGATCY	5 cut(s)	78, 482, 806, 848, 1519
BstZI	CGGCCG	1 cut(s)	817
Bsu15I	ATCGAT	1 cut(s)	1501
BsuRI	GGCC	8 cut(s)	518, 749, 819, 1421, 1755, 1798, 2298, 2918
BsuTUI	ATCGAT	1 cut(s)	1501
BtgI	CCRYGG	5 cut(s)	616, 2521, 2769, 2995, 3274
BtgZI	GCGATG	2 cut(s)	343, 1458
BtrI	CACGTC	1 cut(s)	3169
BtsCI	GGATG	2 cut(s)	2463, 3296
BtsI	GCAGTG	1 cut(s)	716
BtsIMutI	CAGTG	3 cut(s)	716, 1618, 1845
BveI	ACCTGC	1 cut(s)	1234
Cac8I	GCNNGC	8 cut(s)	50, 520, 532, 602, 1056, 1753, 1933, 2565
CaiI	CAGNNNCTG	2 cut(s)	729, 1177
CciI	TCATGA	1 cut(s)	2907
CfoI	GCGC	6 cut(s)	377, 633, 647, 1123, 1249, 2173
Cfr10I	RCCGGY	5 cut(s)	745, 755, 869, 937, 1111
Cfr13I	GGNCC	5 cut(s)	546, 679, 748, 753, 2297
Cfr42I	CCGCGG	2 cut(s)	619, 2524
ClaI	ATCGAT	1 cut(s)	1501
CpoI	CGGWCCG	1 cut(s)	753
CseI	GACGC	1 cut(s)	1084
Csp6I	GTAC	5 cut(s)	187, 2093, 2615, 2989, 3312
CspI	CGGWCCG	1 cut(s)	753
CviQI	GTAC	5 cut(s)	187, 2093, 2615, 2989, 3312
DinI	GGCGCC	1 cut(s)	1248
DriI	GACNNNNNGTC	1 cut(s)	1734
EaeI	YGGCCR	3 cut(s)	817, 1753, 2916
EagI	CGGCCG	1 cut(s)	817
Eam1104I	CTCTTC	8 cut(s)	41, 117, 205, 515, 780, 925, 1454, 2244
Eam1105I	GACNNNNNGTC	1 cut(s)	1734
EarI	CTCTTC	8 cut(s)	41, 117, 205, 515, 780, 925, 1454, 2244
EciI	GGCGGA	4 cut(s)	252, 394, 548, 1686
Ecl136II	GAGCTC	1 cut(s)	639
EclXI	CGGCCG	1 cut(s)	817
Eco130I	CCWWGG	4 cut(s)	2769, 2967, 2995, 3274
Eco147I	AGGCCT	1 cut(s)	1798
Eco24I	GRGCYC	2 cut(s)	641, 1466
Eco31I	GGTCTC	3 cut(s)	1831, 2735, 2866
Eco47I	GGWCC	3 cut(s)	546, 679, 753
Eco47III	AGCGCT	2 cut(s)	1122, 2172
Eco52I	CGGCCG	1 cut(s)	817
Eco53kI	GAGCTC	1 cut(s)	639
Eco57I	CTGAAG	4 cut(s)	1533, 2246, 2282, 2655
Eco88I	CYCGRG	1 cut(s)	878
EcoICRI	GAGCTC	1 cut(s)	639
EcoNI	CCTNNNNNAGG	1 cut(s)	512
EcoO109I	RGGNCCY	1 cut(s)	546
EcoRI	GAATTC	1 cut(s)	925
EcoRII	CCWGG	3 cut(s)	513, 1816, 3265
EcoT14I	CCWWGG	4 cut(s)	2769, 2967, 2995, 3274
EcoT22I	ATGCAT	1 cut(s)	1597
EcoT38I	GRGCYC	2 cut(s)	641, 1466
EgeI	GGCGCC	1 cut(s)	1248
EheI	GGCGCC	1 cut(s)	1248
ErhI	CCWWGG	4 cut(s)	2769, 2967, 2995, 3274
Esp3I	CGTCTC	4 cut(s)	406, 1257, 1997, 2651
FalI	AAGNNNNNCTT	6 cut(s)	96, 128, 2310, 2342, 2944, 2976
FaqI	GGGAC	6 cut(s)	331, 559, 688, 969, 2095, 2527
FauI	CCCGC	9 cut(s)	139, 253, 258, 280, 301, 536, 539, 623, 702
FbaI	TGATCA	1 cut(s)	3096
FblI	GTMKAC	2 cut(s)	669, 2221
FokI	GGATG	2 cut(s)	2470, 3283
FriOI	GRGCYC	2 cut(s)	641, 1466
FspBI	CTAG	6 cut(s)	1644, 1767, 2423, 2811, 3009, 3325
GlaI	GCGC	6 cut(s)	376, 632, 646, 1122, 1248, 2172
GsuI	CTGGAG	5 cut(s)	520, 668, 1145, 1594, 1623
HaeII	RGCGCY	3 cut(s)	1124, 1250, 2174
HaeIII	GGCC	8 cut(s)	518, 749, 819, 1421, 1755, 1798, 2298, 2918
HgaI	GACGC	1 cut(s)	1084
HhaI	GCGC	6 cut(s)	377, 633, 647, 1123, 1249, 2173
Hin1I	GRCGYC	3 cut(s)	902, 1076, 1247
Hin6I	GCGC	6 cut(s)	375, 631, 645, 1121, 1247, 2171
HinP1I	GCGC	6 cut(s)	375, 631, 645, 1121, 1247, 2171
HincII	GTYRAC	2 cut(s)	610, 670
HindII	GTYRAC	2 cut(s)	610, 670
HindIII	AAGCTT	5 cut(s)	826, 1344, 2291, 2468, 2804
Hpy166II	GTNNAC	7 cut(s)	610, 670, 935, 2222, 3148, 3181, 3241
Hpy8I	GTNNAC	7 cut(s)	610, 670, 935, 2222, 3148, 3181, 3241
HpyCH4III	ACNGT	7 cut(s)	951, 1096, 1362, 1722, 1943, 2860, 3064
HpyCH4IV	ACGT	8 cut(s)	476, 902, 2006, 2350, 2508, 2571, 3168, 3314
HpySE526I	ACGT	8 cut(s)	476, 902, 2006, 2350, 2508, 2571, 3168, 3314
Hsp92I	GRCGYC	3 cut(s)	902, 1076, 1247
HspAI	GCGC	6 cut(s)	375, 631, 645, 1121, 1247, 2171
KasI	GGCGCC	1 cut(s)	1246
KflI	GGGWCCC	1 cut(s)	546
Kpn2I	TCCGGA	2 cut(s)	1012, 1135
Ksp22I	TGATCA	1 cut(s)	3096
KspI	CCGCGG	2 cut(s)	619, 2524
LguI	GCTCTTC	2 cut(s)	1454, 2244
LweI	GCATC	9 cut(s)	1238, 1316, 1481, 1582, 1604, 1656, 2182, 2518, 2680
MaeI	CTAG	6 cut(s)	1644, 1767, 2423, 2811, 3009, 3325
MaeII	ACGT	8 cut(s)	476, 902, 2006, 2350, 2508, 2571, 3168, 3314
MaeIII	GTNAC	5 cut(s)	725, 945, 1278, 2070, 2146
MbiI	CCGCTC	2 cut(s)	534, 691
MflI	RGATCY	5 cut(s)	78, 482, 806, 848, 1519
MhlI	GDGCHC	6 cut(s)	641, 716, 1466, 2140, 2487, 2644
MlsI	TGGCCA	1 cut(s)	1755
MluNI	TGGCCA	1 cut(s)	1755
Mly113I	GGCGCC	1 cut(s)	1247
MlyI	GAGTC	9 cut(s)	101, 665, 1025, 1204, 1562, 1723, 2273, 2768, 2900
MmeI	TCCRAC	5 cut(s)	510, 630, 641, 1097, 2261
Mox20I	TGGCCA	1 cut(s)	1755
Mph1103I	ATGCAT	1 cut(s)	1597
MroI	TCCGGA	2 cut(s)	1012, 1135
MroXI	GAANNNNTTC	1 cut(s)	2267
MscI	TGGCCA	1 cut(s)	1755
MseI	TTAA	7 cut(s)	492, 980, 1650, 1901, 2289, 2574, 2846
MslI	CAYNNNNRTG	4 cut(s)	2750, 2900, 2906, 2912
Msp20I	TGGCCA	1 cut(s)	1755
MspA1I	CMGCKG	5 cut(s)	543, 618, 700, 1751, 2523
MspR9I	CCNGG	9 cut(s)	458, 515, 564, 706, 751, 853, 1244, 1818, 3267
Mva1269I	GAATGC	1 cut(s)	2342
MvaI	CCWGG	3 cut(s)	515, 1818, 3267
MvnI	CGCG	5 cut(s)	618, 633, 645, 647, 2523
NarI	GGCGCC	1 cut(s)	1247
NciI	CCSGG	6 cut(s)	458, 564, 706, 751, 853, 1244
NcoI	CCATGG	3 cut(s)	2769, 2995, 3274
NlaIV	GGNNCC	8 cut(s)	80, 547, 548, 568, 850, 1248, 1521, 2235
NmeAIII	GCCGAG	5 cut(s)	576, 825, 1173, 1878, 2944
NmuCI	GTSAC	4 cut(s)	945, 1278, 2070, 2146
NsiI	ATGCAT	1 cut(s)	1597
NspV	TTCGAA	3 cut(s)	923, 1089, 3031
OliI	CACNNNNGTG	1 cut(s)	2750
PaeR7I	CTCGAG	1 cut(s)	878
PagI	TCATGA	1 cut(s)	2907
PaqCI	CACCTGC	1 cut(s)	1234
PceI	AGGCCT	1 cut(s)	1798
PciSI	GCTCTTC	2 cut(s)	1454, 2244
PcsI	WCGNNNNNNNCGW	5 cut(s)	366, 603, 630, 768, 3297
PctI	GAATGC	1 cut(s)	2342
PdmI	GAANNNNTTC	1 cut(s)	2267
PflFI	GACNNNGTC	1 cut(s)	2709
PfoI	TCCNGGA	3 cut(s)	456, 851, 3265
PleI	GAGTC	9 cut(s)	101, 665, 1024, 1203, 1561, 1723, 2273, 2768, 2899
PluTI	GGCGCC	1 cut(s)	1250
PpsI	GAGTC	9 cut(s)	101, 665, 1024, 1203, 1561, 1723, 2273, 2768, 2899
PpuMI	RGGWCCY	1 cut(s)	546
PshAI	GACNNNNGTC	1 cut(s)	2858
PsiI	TTATAA	1 cut(s)	2933
Psp124BI	GAGCTC	1 cut(s)	641
Psp1406I	AACGTT	1 cut(s)	2508
Psp5II	RGGWCCY	1 cut(s)	546
Psp6I	CCWGG	3 cut(s)	513, 1816, 3265
PspGI	CCWGG	3 cut(s)	513, 1816, 3265
PspN4I	GGNNCC	8 cut(s)	80, 547, 548, 568, 850, 1248, 1521, 2235
PspPI	GGNCC	5 cut(s)	546, 679, 748, 753, 2297
PspPPI	RGGWCCY	1 cut(s)	546
PstNI	CAGNNNCTG	2 cut(s)	729, 1177
PsuI	RGATCY	5 cut(s)	78, 482, 806, 848, 1519
PsyI	GACNNNGTC	1 cut(s)	2709
PvuII	CAGCTG	1 cut(s)	1751
RsaI	GTAC	5 cut(s)	188, 2094, 2616, 2990, 3313
RsaNI	GTAC	5 cut(s)	187, 2093, 2615, 2989, 3312
RseI	CAYNNNNRTG	4 cut(s)	2750, 2900, 2906, 2912
Rsr2I	CGGWCCG	1 cut(s)	753
RsrII	CGGWCCG	1 cut(s)	753
SacI	GAGCTC	1 cut(s)	641
SacII	CCGCGG	2 cut(s)	619, 2524
SalI	GTCGAC	1 cut(s)	668
SapI	GCTCTTC	2 cut(s)	1454, 2244
SaqAI	TTAA	7 cut(s)	492, 980, 1650, 1901, 2289, 2574, 2846
Sau96I	GGNCC	5 cut(s)	546, 679, 748, 753, 2297
ScaI	AGTACT	2 cut(s)	2094, 2990
SchI	GAGTC	9 cut(s)	101, 665, 1025, 1204, 1562, 1723, 2273, 2768, 2900
ScrFI	CCNGG	9 cut(s)	458, 515, 564, 706, 751, 853, 1244, 1818, 3267
SduI	GDGCHC	6 cut(s)	641, 716, 1466, 2140, 2487, 2644
SfaNI	GCATC	9 cut(s)	1238, 1316, 1481, 1582, 1604, 1656, 2182, 2518, 2680
SfcI	CTRYAG	1 cut(s)	216
SfoI	GGCGCC	1 cut(s)	1248
Sfr274I	CTCGAG	1 cut(s)	878
Sfr303I	CCGCGG	2 cut(s)	619, 2524
SfuI	TTCGAA	3 cut(s)	923, 1089, 3031
SgrAI	CRCCGGYG	2 cut(s)	869, 1111
SgrBI	CCGCGG	2 cut(s)	619, 2524
SinI	GGWCC	3 cut(s)	546, 679, 753
SlaI	CTCGAG	1 cut(s)	878
SmiMI	CAYNNNNRTG	4 cut(s)	2750, 2900, 2906, 2912
SmlI	CTYRAG	4 cut(s)	878, 2486, 2558, 2946
SmoI	CTYRAG	4 cut(s)	878, 2486, 2558, 2946
SseBI	AGGCCT	1 cut(s)	1798
SspDI	GGCGCC	1 cut(s)	1246
SspI	AATATT	1 cut(s)	861
SspMI	CTAG	6 cut(s)	1644, 1767, 2423, 2811, 3009, 3325
SstI	GAGCTC	1 cut(s)	641
StuI	AGGCCT	1 cut(s)	1798
StyD4I	CCNGG	9 cut(s)	456, 513, 562, 704, 749, 851, 1242, 1816, 3265
StyI	CCWWGG	4 cut(s)	2769, 2967, 2995, 3274
TaaI	ACNGT	7 cut(s)	951, 1096, 1362, 1722, 1943, 2860, 3064
TaiI	ACGT	8 cut(s)	479, 905, 2009, 2353, 2511, 2574, 3171, 3317
TaqI	TCGA	9 cut(s)	624, 669, 879, 923, 1089, 1157, 1501, 2097, 3031
TaqII	GACCGA	1 cut(s)	933
TatI	WGTACW	2 cut(s)	2092, 2988
Tru1I	TTAA	7 cut(s)	492, 980, 1650, 1901, 2289, 2574, 2846
Tru9I	TTAA	7 cut(s)	492, 980, 1650, 1901, 2289, 2574, 2846
TscAI	CASTG	3 cut(s)	716, 1618, 1845
TseFI	GTSAC	4 cut(s)	945, 1278, 2070, 2146
Tsp45I	GTSAC	4 cut(s)	945, 1278, 2070, 2146
TspGWI	ACGGA	2 cut(s)	379, 2999
TspRI	CASTG	3 cut(s)	716, 1618, 1845
Tth111I	GACNNNGTC	1 cut(s)	2709
VpaK11BI	GGWCC	3 cut(s)	546, 679, 753
XagI	CCTNNNNNAGG	1 cut(s)	512
XapI	RAATTY	3 cut(s)	925, 2309, 2882
XbaI	TCTAGA	2 cut(s)	1766, 2810
XcmI	CCANNNNNNNNNTGG	1 cut(s)	3263
XhoI	CTCGAG	1 cut(s)	878
XmiI	GTMKAC	2 cut(s)	669, 2221
XmnI	GAANNNNTTC	1 cut(s)	2267
XspI	CTAG	6 cut(s)	1644, 1767, 2423, 2811, 3009, 3325
ZraI	GACGTC	1 cut(s)	903
ZrmI	AGTACT	2 cut(s)	2094, 2990
Zsp2I	ATGCAT	1 cut(s)	1597

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.