Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0007674

Physical Location & Seq

Genomic Coordinates Forward (+)

44895997 .. 44900496

Gene Structure 4500 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG257900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2520 bp

ATGCCCTCCTCCTCCTTCTTCTTCCTCTTGCTCTTTCTATTCTGCGCATTACCCTTCGTAGCCCCTAGCCGGCGGATCCTCCACCAGCCGCTTTTACCCCAAGATTCTCTTCCTCCTGCTCCGCCTCCGGCTCCGTCTCCGCCTTCCCTGCCTCCCAACCCGAATCCCAAGTACCCATTTTCAACTTCCAATTCTACCCCTTCAGATTCTCCCTTTTTCCCAACCTACCCCGCCCCACCTCCTCCTCCCTCTTCCCCGGCCACATTCGCCTCCTTCCCGGCCAACATCTCCTCCCTCATTCTCCCCCAGGCACCTGCCTCCAACTCCAAATCCCACAAGCTCGTTGCCCTCGCCGTCTGCGCCGCCATCTCCGCCGTCATCGCCGTCGCCTCCGCCGTCTTCGTCCTCTGCCGTCGCCGGCGCAACAACAACCGCAACTTCCCCGATGAGGACGACAAGACCTACAGATCCGAGCAGAGCAACCGCTTCTTTCAGGCCAGCAATGCCCGCTCCAGCAGCGGGGCCCACAAGCTCCGGACCGGCTCCTCCACCAGCTCCGAGTTCCTCTACCTCGGCACGGTCGTCAACTCCCGCGGAATCGACGAGCGCGTGAGCTCACGCGGCGGCGCGTTGGAGAATCGGAAGGTCGACTCGCCGGACCTCCAGCCGCTGCCGCCGCTGTCCCGGCAGTGCTCCAAGCTCAGTAACTGCACCAATGCCGAACCGGACGAACCGGCTCGGACCGGAGACGAGGAAGAGGAGGAGGAAGAAGAGTTTTACTCGCCGAGAGGATCTTCCGGTGACCGTGAAAGCTTCAATGGAGCTGGATCGGGGTCGCGGAGACTATTCGCCGCCGTGGTGGCCGGCGATCTCGAGGAAAGAAACAGCGAAACGGCGTCGTGCTCGTGCTCGTCTTCAAATTCCGGTTCACCGGCCCGGTCACACTCTATCAGTCTATCTCCGGCGGTCAGTGTAAGTCCGAGAAGACCATCACTACCCAAATCTCCCGAGTCTTCTGTTATGCAGCCTCTGCCTTCACAGCCACTGCCAGCTGATCCTCATTATCCGACGCCGTTTGGTTTCGACACGGTGTCTCGTTCCCCATCTTCGTCGCCGCCGGTGAGACTACTGGAGAACATTCCGGAATCCTCGCCGAGAAGATCGAGTGTTTCGCAGCAGAATCTTCGGTCGCCTTCGTTGAGTCCAATGTCTTCGCCGGAGAGAGCTGTGAAGGAATACCCATCTGCATCTTCGGATCGAAACCCGGCCGGGTCTCCTTCAATGTCTTCACTTACTTCGTCGCCGGAGAGAGATTTGGAGAAGGAGGCAGATGCGTCTCCAAAAGTTTCGGTCTTTTCGAATCAAAGTTCTCCAATTTCTTTACCACCAAAAGCTTCAGCGTTTTCACTATCTTCAAGTTGCTCGTCTTCACCGGATAGAGTATCAAATGCTTCTGATGAAAATGCTAAGTTTCCTTCAGATGGGTCTACCTCACCGGAGAGAGGTTTGGAGAAGAGCCCAGTTGCATCGCCAAGAACTTCAAATGCTTCTGATCGATCATTTATTCATTTGGATCCAAAGAGGCAGTCTTTTTCGTCGGCTTCTTCGGTGTCTTCTTCACCGGAGAGAGAGTTGGGGAACAATTCAGATGCATCACCGCAAGTCTCCAATGTTTCTAATCGTATTGAAGAATCTTCATCTAGACTTAATGGGGCTTTGAAGATGCCTCTTTCCATACCGCCACCTCCTCCGCCGCCACTGCCTCCTTCACTAAGACTGTGGGAGACTCCAAGTCCTAAAACACCAGCTGGCCAACCAATCTGTAGACCTCCAGCTCTTATACCTCCTTCAAGGCCTTTCGTGTTTCAAAACCCAGGGAAGGTCTCTGTTTCACCAGTGCAGCTGCCACCGAGTTCTGCACCATTGGAGCCTATTGAGGAGACTCCGAAACCCAAGTTAAAGCCATTGCATTGGGATAAAGTTAGAGCTAGCTCTGACCGTGAAATGGTGTGGGATCAGCTAAGATCAAGCTCTTTCAAATTGAATGAAGAAATGATAGAGACATTGTTCGTTGTAAATACACCCAAACCGAATCCAAAGGAAACAACCCCACGCCCAGTTATTCCCTCACCTAAGCAAGAGAACAGAGTACTCGATCCTAAAAAGTCCCAGAATATTGCAATTTTGCTTAGGGCACTCAATGTGACCATAGAAGAAGTTTGTGAAGCGCTCATAGAAGGTAATGCAGATGCTCTTGGAACTGAATTACTTGAAAGTCTATTGAAGATGGCTCCAACCAAAGAAGAAGAGCGTAAGCTGAAGGAGTACAAAGATGATTCACCAGTTAAGCTTGGCCCTGCTGAGAAATTTCTGAAAGAACTGCTTGATGTTCCTTTTGCATTTAAAAGGGTCGAGGCAATGCTTTACATGACTAATTTTGAATCTGAAATCGAATACCTGAAAAAGTCTTTCGAAACTCTAGAGGTAAATCACACAATTCCTCTCTCTCTCCGACACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003779 GO:0005488 GO:0005515 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0006996 GO:0007010 GO:0007015 GO:0008064 GO:0008092 GO:0008150 GO:0009987 GO:0010638 GO:0010639 GO:0016020 GO:0016043 GO:0030029 GO:0030036 GO:0030312 GO:0030832 GO:0030833 GO:0030834 GO:0030835 GO:0030837 GO:0030838 GO:0031333 GO:0031334 GO:0032271 GO:0032272 GO:0032273 GO:0032535 GO:0032956 GO:0032970 GO:0033043 GO:0043242 GO:0043244 GO:0043254 GO:0044087 GO:0044089 GO:0044464 GO:0044877 GO:0045010 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051015 GO:0051016 GO:0051128 GO:0051129 GO:0051130 GO:0051493 GO:0051494 GO:0051495 GO:0051693 GO:0065007 GO:0065008 GO:0071840 GO:0071944 GO:0090066 GO:0097435 GO:0110053 GO:1901879 GO:1901880 GO:1902903 GO:1902904 GO:1902905

KEGG Pathways

Metabolic & Signaling

ko04320 map04320

Pfam Domains

Protein Families

FH2

Protein Analysis

839

Amino Acids

90.87

Weight (kDa)

6.81

Isoelectric Point (pI)

90.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FH2	PF02181	647 - 828	9.5e-56	Formin Homology 2 Domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0007674)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G25500
fragaria_vesca	FvH4_2g17360 FvH4_2g17360 FvH4_2g17360
malus_domestica	MD05G1152500.v1.1 MD10G1147000.v1.1
prunus_persica	Prupe.8G185400_v2.0.a1
pyrus_communis	pycom05g14690 pycom10g12670
rosa_chinensis	RchiOBHm_Chr6g0281991
rosa_laevigata	RLG00000012921
rosa_multiflora	Rmu_sc0000569.1_g000001 Rmu_sc0001255.1_g000001 Rmu_sc0011823.1_g000001
rosa_roxburghii	Rroxscaffold_7G00186650
rosa_rugosa	Rorug06G0144700
rosa_samantha	Rh4CG162200 Rh4CG270300 Rh6AG257900 Rh6BG260900 Rh6CG259800 Rh6DG252200 Rh7AG416400
rosa_wichuraiana	Rw6G022300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	322
Acc16I	TGCGCA	1 cut(s)	46
Acc36I	ACCTGC	1 cut(s)	322
AccB1I	GGYRCC	1 cut(s)	310
AccBSI	CCGCTC	1 cut(s)	510
AccI	GTMKAC	3 cut(s)	648, 1487, 1825
AccII	CGCG	5 cut(s)	594, 609, 621, 629, 838
AccIII	TCCGGA	2 cut(s)	534, 1141
AcoI	YGGCCR	5 cut(s)	258, 279, 861, 1266, 1810
AcsI	RAATTY	2 cut(s)	919, 2366
AcuI	CTGAAG	4 cut(s)	186, 1380, 1461, 2339
AcyI	GRCGYC	2 cut(s)	896, 1070
AfaI	GTAC	3 cut(s)	173, 2151, 2327
AfeI	AGCGCT	1 cut(s)	2229
AfiI	CCNNNNNNNGG	8 cut(s)	69, 448, 519, 577, 1481, 1502, 1879, 2005
AhdI	GACNNNNNGTC	2 cut(s)	1090, 1791
AjnI	CCWGG	2 cut(s)	306, 1873
AjuI	GAANNNNNNNTTGG	2 cut(s)	93, 125
Alw21I	GWGCWC	4 cut(s)	617, 695, 905, 911
AlwNI	CAGNNNCTG	4 cut(s)	670, 708, 1030, 1045
Ama87I	CYCGRG	2 cut(s)	872, 1007
Aor13HI	TCCGGA	2 cut(s)	534, 1141
Aor51HI	AGCGCT	1 cut(s)	2229
ApaI	GGGCCC	1 cut(s)	526
ApeKI	GCWGC	6 cut(s)	516, 670, 1024, 1174, 1900, 1903
ApoI	RAATTY	2 cut(s)	919, 2366
ArsI	GACNNNNNNTTYG	2 cut(s)	1571, 1603
AspLEI	GCGC	6 cut(s)	47, 362, 423, 609, 629, 2230
AspS9I	GGNCC	7 cut(s)	522, 523, 537, 658, 741, 934, 2354
AsuC2I	CCSGG	6 cut(s)	257, 278, 685, 937, 1265, 1270
AsuII	TTCGAA	2 cut(s)	1358, 2472
AsuNHI	GCTAGC	1 cut(s)	1988
AvaI	CYCGRG	2 cut(s)	872, 1007
AvaII	GGWCC	3 cut(s)	537, 658, 741
BaeGI	GKGCMC	2 cut(s)	526, 2197
BalI	TGGCCA	1 cut(s)	1812
BamHI	GGATCC	2 cut(s)	75, 1573
BanI	GGYRCC	1 cut(s)	310
BanII	GRGCYC	3 cut(s)	526, 617, 1520
BauI	CACGAG	1 cut(s)	904
BbsI	GAAGAC	8 cut(s)	391, 906, 991, 1005, 1203, 1278, 1419, 1605
Bbv12I	GWGCWC	4 cut(s)	617, 695, 905, 911
BbvI	GCAGC	6 cut(s)	528, 657, 1036, 1186, 1890, 1912
BccI	CCATC	6 cut(s)	374, 997, 1111, 1249, 1475, 2281
BceAI	ACGGC	8 cut(s)	338, 359, 368, 380, 396, 839, 909, 1057
BcgI	CGANNNNNNTGC	2 cut(s)	1166, 1200
BciT130I	CCWGG	2 cut(s)	308, 1875
BcnI	CCSGG	6 cut(s)	257, 278, 685, 937, 1265, 1270
BfaI	CTAG	4 cut(s)	66, 1701, 1989, 2480
BfmI	CTRYAG	2 cut(s)	463, 1822
BfoI	RGCGCY	1 cut(s)	2231
BfuAI	ACCTGC	1 cut(s)	322
BglI	GCCNNNNNGGC	1 cut(s)	860
BmcAI	AGTACT	1 cut(s)	2151
Bme1390I	CCNGG	8 cut(s)	257, 278, 308, 685, 937, 1265, 1270, 1875
Bme18I	GGWCC	3 cut(s)	537, 658, 741
BmeRI	GACNNNNNGTC	2 cut(s)	1090, 1791
BmeT110I	CYCGRG	2 cut(s)	872, 1007
BmgT120I	GGNCC	7 cut(s)	522, 523, 537, 658, 741, 934, 2354
BmiI	GGNNCC	9 cut(s)	77, 132, 312, 523, 524, 544, 1575, 1929, 2292
BmrFI	CCNGG	8 cut(s)	257, 278, 308, 685, 937, 1265, 1270, 1875
BmrI	ACTGGG	2 cut(s)	1514, 2111
BmsI	GCATC	7 cut(s)	1256, 1321, 1535, 1639, 1661, 1713, 2239
BmtI	GCTAGC	1 cut(s)	1992
BmuI	ACTGGG	2 cut(s)	1514, 2111
BpiI	GAAGAC	8 cut(s)	391, 906, 991, 1005, 1203, 1278, 1419, 1605
BplI	GAGNNNNNCTC	2 cut(s)	764, 796
BpmI	CTGGAG	4 cut(s)	496, 647, 1151, 1815
Bpu10I	CCTNAGC	2 cut(s)	2133, 2189
Bpu14I	TTCGAA	2 cut(s)	1358, 2472
BpuMI	CCSGG	6 cut(s)	257, 278, 685, 937, 1265, 1270
Bsa29I	ATCGAT	1 cut(s)	1555
BsaHI	GRCGYC	2 cut(s)	896, 1070
BsaI	GGTCTC	2 cut(s)	1278, 1888
BsaJI	CCNNGG	7 cut(s)	255, 306, 571, 592, 855, 1873, 1874
BsaWI	WCCGGW	9 cut(s)	534, 724, 743, 797, 923, 1141, 1432, 1495, 1621
BsaXI	ACNNNNNCTCC	4 cut(s)	275, 305, 1616, 1646
Bsc4I	CCNNNNNNNGG	8 cut(s)	69, 448, 519, 577, 1481, 1502, 1879, 2005
Bse118I	RCCGGY	7 cut(s)	69, 417, 539, 733, 863, 931, 1117
Bse1I	ACTGG	5 cut(s)	1134, 1520, 1895, 2117, 2342
Bse3DI	GCAATG	3 cut(s)	508, 1964, 2424
BseAI	TCCGGA	2 cut(s)	534, 1141
BseBI	CCWGG	2 cut(s)	308, 1875
BseCI	ATCGAT	1 cut(s)	1555
BseDI	CCNNGG	7 cut(s)	255, 306, 571, 592, 855, 1873, 1874
BseLI	CCNNNNNNNGG	8 cut(s)	69, 448, 519, 577, 1481, 1502, 1879, 2005
BseMI	GCAATG	3 cut(s)	508, 1964, 2424
BseMII	CTCAG	2 cut(s)	715, 2352
BseNI	ACTGG	5 cut(s)	1134, 1520, 1895, 2117, 2342
BseRI	GAGGAG	8 cut(s)	231, 234, 280, 535, 773, 776, 1737, 1952
BseSI	GKGCMC	2 cut(s)	526, 2197
BseX3I	CGGCCG	1 cut(s)	1266
BseXI	GCAGC	6 cut(s)	528, 657, 1036, 1186, 1890, 1912
BsgI	GTGCAG	3 cut(s)	694, 1902, 1919
Bsh1236I	CGCG	5 cut(s)	594, 609, 621, 629, 838
Bsh1285I	CGRYCG	3 cut(s)	582, 1190, 1269
BshNI	GGYRCC	1 cut(s)	310
BshVI	ATCGAT	1 cut(s)	1555
BsiEI	CGRYCG	3 cut(s)	582, 1190, 1269
BsiHKAI	GWGCWC	4 cut(s)	617, 695, 905, 911
BsiHKCI	CYCGRG	2 cut(s)	872, 1007
BslFI	GGGAC	2 cut(s)	667, 2152
BslI	CCNNNNNNNGG	8 cut(s)	69, 448, 519, 577, 1481, 1502, 1879, 2005
BsmBI	CGTCTC	3 cut(s)	141, 741, 1341
BsmFI	GGGAC	2 cut(s)	667, 2152
Bso31I	GGTCTC	2 cut(s)	1278, 1888
BsoBI	CYCGRG	2 cut(s)	872, 1007
Bsp119I	TTCGAA	2 cut(s)	1358, 2472
Bsp120I	GGGCCC	1 cut(s)	522
Bsp1286I	GDGCHC	7 cut(s)	526, 617, 695, 905, 911, 1520, 2197
Bsp13I	TCCGGA	2 cut(s)	534, 1141
BspCNI	CTCAG	2 cut(s)	714, 2353
BspDI	ATCGAT	1 cut(s)	1555
BspEI	TCCGGA	2 cut(s)	534, 1141
BspFNI	CGCG	5 cut(s)	594, 609, 621, 629, 838
BspLI	GGNNCC	9 cut(s)	77, 132, 312, 523, 524, 544, 1575, 1929, 2292
BspMI	ACCTGC	1 cut(s)	322
BspOI	GCTAGC	1 cut(s)	1992
BspQI	GCTCTTC	2 cut(s)	1508, 2301
BspT104I	TTCGAA	2 cut(s)	1358, 2472
BspT107I	GGYRCC	1 cut(s)	310
BspTNI	GGTCTC	2 cut(s)	1278, 1888
BsrBI	CCGCTC	1 cut(s)	510
BsrDI	GCAATG	3 cut(s)	508, 1964, 2424
BsrFI	RCCGGY	7 cut(s)	69, 417, 539, 733, 863, 931, 1117
BsrI	ACTGG	5 cut(s)	1134, 1520, 1895, 2117, 2342
BssAI	RCCGGY	7 cut(s)	69, 417, 539, 733, 863, 931, 1117
BssECI	CCNNGG	7 cut(s)	255, 306, 571, 592, 855, 1873, 1874
BssNI	GRCGYC	2 cut(s)	896, 1070
BssSI	CACGAG	1 cut(s)	904
Bst2BI	CACGAG	1 cut(s)	904
Bst2UI	CCWGG	2 cut(s)	308, 1875
Bst4CI	ACNGT	5 cut(s)	580, 806, 1090, 1779, 2000
Bst6I	CTCTTC	6 cut(s)	114, 256, 750, 765, 1508, 2301
BstACI	GRCGYC	2 cut(s)	896, 1070
BstAPI	GCANNNNNTGC	1 cut(s)	1030
BstBI	TTCGAA	2 cut(s)	1358, 2472
BstC8I	GCNNGC	8 cut(s)	71, 419, 499, 508, 865, 1050, 1810, 1990
BstDEI	CTNAG	7 cut(s)	701, 1467, 1772, 2021, 2133, 2189, 2361
BstDSI	CCRYGG	2 cut(s)	592, 855
BstEII	GGTNACC	1 cut(s)	800
BstFNI	CGCG	5 cut(s)	594, 609, 621, 629, 838
BstH2I	RGCGCY	1 cut(s)	2231
BstHHI	GCGC	6 cut(s)	47, 362, 423, 609, 629, 2230
BstMCI	CGRYCG	3 cut(s)	582, 1190, 1269
BstNI	CCWGG	2 cut(s)	308, 1875
BstPI	GGTNACC	1 cut(s)	800
BstSCI	CCNGG	8 cut(s)	255, 276, 306, 683, 935, 1263, 1268, 1873
BstSFI	CTRYAG	2 cut(s)	463, 1822
BstSLI	GKGCMC	2 cut(s)	526, 2197
BstUI	CGCG	5 cut(s)	594, 609, 621, 629, 838
BstV1I	GCAGC	6 cut(s)	528, 657, 1036, 1186, 1890, 1912
BstV2I	GAAGAC	8 cut(s)	391, 906, 991, 1005, 1203, 1278, 1419, 1605
BstX2I	RGATCY	4 cut(s)	75, 467, 791, 1573
BstXI	CCANNNNNNTGG	1 cut(s)	1971
BstYI	RGATCY	4 cut(s)	75, 467, 791, 1573
BstZI	CGGCCG	1 cut(s)	1266
Bsu15I	ATCGAT	1 cut(s)	1555
BsuTUI	ATCGAT	1 cut(s)	1555
BtgI	CCRYGG	2 cut(s)	592, 855
BtgZI	GCGATG	2 cut(s)	364, 1512
BtsI	GCAGTG	3 cut(s)	695, 1043, 1757
BtsIMutI	CAGTG	5 cut(s)	695, 976, 1043, 1757, 1902
BveI	ACCTGC	1 cut(s)	322
Cac8I	GCNNGC	8 cut(s)	71, 419, 499, 508, 865, 1050, 1810, 1990
CaiI	CAGNNNCTG	4 cut(s)	670, 708, 1030, 1045
CfoI	GCGC	6 cut(s)	47, 362, 423, 609, 629, 2230
Cfr10I	RCCGGY	7 cut(s)	69, 417, 539, 733, 863, 931, 1117
Cfr13I	GGNCC	7 cut(s)	522, 523, 537, 658, 741, 934, 2354
Cfr42I	CCGCGG	1 cut(s)	595
ClaI	ATCGAT	1 cut(s)	1555
CpoI	CGGWCCG	2 cut(s)	537, 741
CseI	GACGC	3 cut(s)	885, 1078, 1323
Csp6I	GTAC	3 cut(s)	172, 2150, 2326
CspI	CGGWCCG	2 cut(s)	537, 741
CviAII	CATG	1 cut(s)	2428
CviQI	GTAC	3 cut(s)	172, 2150, 2326
DdeI	CTNAG	7 cut(s)	701, 1467, 1772, 2021, 2133, 2189, 2361
DraI	TTTAAA	1 cut(s)	2404
DriI	GACNNNNNGTC	2 cut(s)	1090, 1791
EaeI	YGGCCR	5 cut(s)	258, 279, 861, 1266, 1810
EagI	CGGCCG	1 cut(s)	1266
Eam1104I	CTCTTC	6 cut(s)	114, 256, 750, 765, 1508, 2301
Eam1105I	GACNNNNNGTC	2 cut(s)	1090, 1791
EarI	CTCTTC	6 cut(s)	114, 256, 750, 765, 1508, 2301
EciI	GGCGGA	6 cut(s)	88, 111, 129, 361, 382, 1740
Ecl136II	GAGCTC	1 cut(s)	615
EclXI	CGGCCG	1 cut(s)	1266
Eco147I	AGGCCT	1 cut(s)	1855
Eco24I	GRGCYC	3 cut(s)	526, 617, 1520
Eco31I	GGTCTC	2 cut(s)	1278, 1888
Eco47I	GGWCC	3 cut(s)	537, 658, 741
Eco47III	AGCGCT	1 cut(s)	2229
Eco52I	CGGCCG	1 cut(s)	1266
Eco53kI	GAGCTC	1 cut(s)	615
Eco57I	CTGAAG	4 cut(s)	186, 1380, 1461, 2339
Eco88I	CYCGRG	2 cut(s)	872, 1007
Eco91I	GGTNACC	1 cut(s)	800
EcoICRI	GAGCTC	1 cut(s)	615
EcoO109I	RGGNCCY	1 cut(s)	522
EcoO65I	GGTNACC	1 cut(s)	800
EcoRII	CCWGG	2 cut(s)	306, 1873
EcoT22I	ATGCAT	1 cut(s)	1654
EcoT38I	GRGCYC	3 cut(s)	526, 617, 1520
Esp3I	CGTCTC	3 cut(s)	141, 741, 1341
FaeI	CATG	1 cut(s)	2431
FaiI	YATR	6 cut(s)	1022, 1736, 1841, 2210, 2234, 2429
FalI	AAGNNNNNCTT	4 cut(s)	93, 125, 2367, 2399
FaqI	GGGAC	2 cut(s)	667, 2152
FatI	CATG	1 cut(s)	2427
FauI	CCCGC	4 cut(s)	238, 512, 515, 599
FblI	GTMKAC	3 cut(s)	648, 1487, 1825
FriOI	GRGCYC	3 cut(s)	526, 617, 1520
FspBI	CTAG	4 cut(s)	66, 1701, 1989, 2480
FspI	TGCGCA	1 cut(s)	46
GlaI	GCGC	6 cut(s)	46, 361, 422, 608, 628, 2229
GsuI	CTGGAG	4 cut(s)	496, 647, 1151, 1815
HaeII	RGCGCY	1 cut(s)	2231
HgaI	GACGC	3 cut(s)	885, 1078, 1323
HhaI	GCGC	6 cut(s)	47, 362, 423, 609, 629, 2230
Hin1I	GRCGYC	2 cut(s)	896, 1070
Hin1II	CATG	1 cut(s)	2431
Hin6I	GCGC	6 cut(s)	45, 360, 421, 607, 627, 2228
HinP1I	GCGC	6 cut(s)	45, 360, 421, 607, 627, 2228
HincII	GTYRAC	2 cut(s)	586, 649
HindII	GTYRAC	2 cut(s)	586, 649
HindIII	AAGCTT	3 cut(s)	811, 1392, 2348
Hpy166II	GTNNAC	5 cut(s)	586, 649, 929, 1488, 1826
Hpy188III	TCNNGA	6 cut(s)	535, 872, 1007, 1142, 1701, 2480
Hpy8I	GTNNAC	5 cut(s)	586, 649, 929, 1488, 1826
Hpy99I	CGWCG	8 cut(s)	389, 417, 605, 901, 1072, 1114, 1303, 1600
HpyCH4III	ACNGT	5 cut(s)	580, 806, 1090, 1779, 2000
HpyF3I	CTNAG	7 cut(s)	701, 1467, 1772, 2021, 2133, 2189, 2361
Hsp92I	GRCGYC	2 cut(s)	896, 1070
Hsp92II	CATG	1 cut(s)	2431
HspAI	GCGC	6 cut(s)	45, 360, 421, 607, 627, 2228
Kpn2I	TCCGGA	2 cut(s)	534, 1141
KroI	GCCGGC	3 cut(s)	69, 417, 863
KroNI	GCCGGC	3 cut(s)	71, 419, 865
KspI	CCGCGG	1 cut(s)	595
LguI	GCTCTTC	2 cut(s)	1508, 2301
Lsp1109I	GCAGC	6 cut(s)	528, 657, 1036, 1186, 1890, 1912
LweI	GCATC	7 cut(s)	1256, 1321, 1535, 1639, 1661, 1713, 2239
MaeI	CTAG	4 cut(s)	66, 1701, 1989, 2480
MaeIII	GTNAC	4 cut(s)	704, 800, 939, 2203
MbiI	CCGCTC	1 cut(s)	510
MflI	RGATCY	4 cut(s)	75, 467, 791, 1573
MhlI	GDGCHC	7 cut(s)	526, 617, 695, 905, 911, 1520, 2197
MlsI	TGGCCA	1 cut(s)	1812
MluNI	TGGCCA	1 cut(s)	1812
MlyI	GAGTC	5 cut(s)	644, 1019, 1210, 1780, 1936
MmeI	TCCRAC	4 cut(s)	345, 612, 1091, 2318
Mox20I	TGGCCA	1 cut(s)	1812
Mph1103I	ATGCAT	1 cut(s)	1654
MreI	CGCCGGCG	1 cut(s)	417
MroI	TCCGGA	2 cut(s)	534, 1141
MroNI	GCCGGC	3 cut(s)	69, 417, 863
MscI	TGGCCA	1 cut(s)	1812
MseI	TTAA	4 cut(s)	1707, 1958, 2346, 2403
Msp20I	TGGCCA	1 cut(s)	1812
MspA1I	CMGCKG	7 cut(s)	519, 594, 670, 679, 1052, 1808, 1903
MspR9I	CCNGG	8 cut(s)	257, 278, 308, 685, 937, 1265, 1270, 1875
MvaI	CCWGG	2 cut(s)	308, 1875
MvnI	CGCG	5 cut(s)	594, 609, 621, 629, 838
NaeI	GCCGGC	3 cut(s)	71, 419, 865
NciI	CCSGG	6 cut(s)	257, 278, 685, 937, 1265, 1270
NgoMIV	GCCGGC	3 cut(s)	69, 417, 863
NheI	GCTAGC	1 cut(s)	1988
NlaIII	CATG	1 cut(s)	2431
NlaIV	GGNNCC	9 cut(s)	77, 132, 312, 523, 524, 544, 1575, 1929, 2292
NmeAIII	GCCGAG	3 cut(s)	552, 810, 1179
NmuCI	GTSAC	3 cut(s)	800, 939, 2203
NsbI	TGCGCA	1 cut(s)	46
NsiI	ATGCAT	1 cut(s)	1654
NspV	TTCGAA	2 cut(s)	1358, 2472
PaeR7I	CTCGAG	1 cut(s)	872
PaqCI	CACCTGC	1 cut(s)	322
PasI	CCCWGGG	1 cut(s)	1874
PceI	AGGCCT	1 cut(s)	1855
PciSI	GCTCTTC	2 cut(s)	1508, 2301
PcsI	WCGNNNNNNNCGW	4 cut(s)	393, 579, 606, 1355
PdiI	GCCGGC	3 cut(s)	71, 419, 865
PleI	GAGTC	5 cut(s)	644, 1018, 1209, 1780, 1936
PpsI	GAGTC	5 cut(s)	644, 1018, 1209, 1780, 1936
Psp124BI	GAGCTC	1 cut(s)	617
Psp6I	CCWGG	2 cut(s)	306, 1873
PspEI	GGTNACC	1 cut(s)	800
PspGI	CCWGG	2 cut(s)	306, 1873
PspN4I	GGNNCC	9 cut(s)	77, 132, 312, 523, 524, 544, 1575, 1929, 2292
PspOMI	GGGCCC	1 cut(s)	522
PspPI	GGNCC	7 cut(s)	522, 523, 537, 658, 741, 934, 2354
PstNI	CAGNNNCTG	4 cut(s)	670, 708, 1030, 1045
PsuI	RGATCY	4 cut(s)	75, 467, 791, 1573
PvuII	CAGCTG	3 cut(s)	1052, 1808, 1903
RsaI	GTAC	3 cut(s)	173, 2151, 2327
RsaNI	GTAC	3 cut(s)	172, 2150, 2326
Rsr2I	CGGWCCG	2 cut(s)	537, 741
RsrII	CGGWCCG	2 cut(s)	537, 741
SacI	GAGCTC	1 cut(s)	617
SacII	CCGCGG	1 cut(s)	595
SalI	GTCGAC	1 cut(s)	647
SapI	GCTCTTC	2 cut(s)	1508, 2301
SaqAI	TTAA	4 cut(s)	1707, 1958, 2346, 2403
Sau96I	GGNCC	7 cut(s)	522, 523, 537, 658, 741, 934, 2354
ScaI	AGTACT	1 cut(s)	2151
SchI	GAGTC	5 cut(s)	644, 1019, 1210, 1780, 1936
ScrFI	CCNGG	8 cut(s)	257, 278, 308, 685, 937, 1265, 1270, 1875
SduI	GDGCHC	7 cut(s)	526, 617, 695, 905, 911, 1520, 2197
SfaNI	GCATC	7 cut(s)	1256, 1321, 1535, 1639, 1661, 1713, 2239
SfcI	CTRYAG	2 cut(s)	463, 1822
Sfr274I	CTCGAG	1 cut(s)	872
Sfr303I	CCGCGG	1 cut(s)	595
SfuI	TTCGAA	2 cut(s)	1358, 2472
SgrAI	CRCCGGYG	2 cut(s)	417, 1117
SgrBI	CCGCGG	1 cut(s)	595
SinI	GGWCC	3 cut(s)	537, 658, 741
SlaI	CTCGAG	1 cut(s)	872
SmlI	CTYRAG	1 cut(s)	872
SmoI	CTYRAG	1 cut(s)	872
SseBI	AGGCCT	1 cut(s)	1855
SspI	AATATT	1 cut(s)	2176
SspMI	CTAG	4 cut(s)	66, 1701, 1989, 2480
SstI	GAGCTC	1 cut(s)	617
StuI	AGGCCT	1 cut(s)	1855
StyD4I	CCNGG	8 cut(s)	255, 276, 306, 683, 935, 1263, 1268, 1873
TaaI	ACNGT	5 cut(s)	580, 806, 1090, 1779, 2000
TaqII	GACCGA	2 cut(s)	1176, 1339
TatI	WGTACW	2 cut(s)	2149, 2325
Tru1I	TTAA	4 cut(s)	1707, 1958, 2346, 2403
Tru9I	TTAA	4 cut(s)	1707, 1958, 2346, 2403
TscAI	CASTG	5 cut(s)	695, 976, 1050, 1764, 1902
TseFI	GTSAC	3 cut(s)	800, 939, 2203
TseI	GCWGC	6 cut(s)	516, 670, 1024, 1174, 1900, 1903
Tsp45I	GTSAC	3 cut(s)	800, 939, 2203
TspDTI	ATGAA	4 cut(s)	1473, 1556, 1686, 2061
TspGWI	ACGGA	1 cut(s)	123
TspRI	CASTG	5 cut(s)	695, 976, 1050, 1764, 1902
VpaK11BI	GGWCC	3 cut(s)	537, 658, 741
XapI	RAATTY	2 cut(s)	919, 2366
XbaI	TCTAGA	2 cut(s)	1700, 2479
XhoI	CTCGAG	1 cut(s)	872
XmiI	GTMKAC	3 cut(s)	648, 1487, 1825
XspI	CTAG	4 cut(s)	66, 1701, 1989, 2480
ZrmI	AGTACT	1 cut(s)	2151
Zsp2I	ATGCAT	1 cut(s)	1654

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.