Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0007674

Physical Location & Seq

Genomic Coordinates Forward (+)

47519169 .. 47523741

Gene Structure 4573 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG260900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3315 bp

ATGCCCTCCTCCTCCTTCTTCTTCCTCTTGCTCTTTCTATTCTGCACACTACCCTTCGTAGCCCCTAGCCGGCGGATCCTCCACCAGCCGCTTTTACCCCAAGATTCTCTTCCTCCTGCTCCGCCTCCGGCTCCGTCTCCGCCTTCTCTGCCTCCCAACCCGAATCCAAAGTACCCATTTTCAACTTCCAATTCTACCCCTTCAGATTCTCCCTTTTTCCCAACCTACCCCGCCCCGCCTCCTCCTCCCTCTTCCCCGGCCACATTCGCCTCCTTCCCGGCCAACATCTCCTCCCTCATTCTCCCCCAGGCACCTGCCTCCAACTCCAAATCCCACAAGCTCGTTGCCCTCGCCGTCTGTGCCGCCATCTCCGCCGTCATCGCCGTCGCCTCCGCCGTCTTCGTCCTCTGCCGTCGCCGGCGCAACAACAACCGCAACTTCCCCGATGAGGACGACAAGACCTACAGATCCGAGCAGAGCAACCGCTTCTTTCAGGCCAGCAATGCCCGCTCCAGCAGCGGGGCCCACAAGCTCCGGACCGGCTCCTCCACCAGCTCCGAGTTCCTCTACCTCGGCACGGTCGTCAACTCCCGCGGAATCGACGAGCGCGTGAGCTCACGCGGCGGCGCGTTGGAGAATCGGAAGGTCGACTCGCCGGACCTCCAGCCTCTCCCGCCGCTGTCCCGCCAGTGCTCCAAGCTCAGTAACTGCACCAATGCGGAACCGGACGAACCGGCTCGGACCGGAGACGAGGAAGAGGAGGAGGAAGAAGAGTTTTACTCGCCGAGAGGATCTTCCGGTGACCGTGAAAGCTTCAATGGAGCTGGATCGGGGTCGCGGAGACTATTCGCGGCCGTGGTGGCCGGCGATCTCGAGGAAAGAAACAGCGAAACGACGTCGTGCTCGTGCTCGTCTTCAAATTCCGGTTCACCGGCCCGGTCGCACTCTATTAGTCTATCTCCGGCGGTCAGTGTAAGTCCGAGAAGACCATCACTACCCAAATCTCCCGAGTCTTCTGTTATGCAGCCTCTGCCTTCACAGCCACTGCCAGCTGAGCCTCATTATCCGACGCCGTTTGGTTTCGACACGGTGTCTCGTTCCCCATCTTCGTCGCCGCCGGTGAGACTACTGGAGAATATTCCGGAATCCTCGCCGAGAAGATCGAGCGTTTCGCAGCAGAATCTGCGGTCGCCTTCGCTGAGTCCAATGTCTTCGCCGGAGAGAGCTGTGGAGGAATACCCATCTGCATCTTCGGATCGAAACCCGGCCGGGTCTCCTTCAATGTCTTCACTTACTTCGTCGCCGGAGAGAGATTTGGAGAAGGAGGCAGACGCGTCTCCAAAAGTTTCGGTCTTTTCGAATCAAAGTTCTCCAATTTATTTACCACCAAAAACTTCAGCGTTTTCACTATCTTCAAGTTGCTCGTCTTCACCGGATAGAGTATCAAATGCTTCTGATGAAAATGCCAAGTCTCCTTCAGATGGGTCCATGTCACCGGAGAGAGGTTTGGAGAAGAGCCCAGTTGCATCGCCAAGAACTTCAAATGCTTCTGATCGATCATTTATTCATTTGGATCCAAAGAGGCAGTCTTTTTCGTCGGCTTCTTCGGCGTCTTCTTCACCGGAGAGAGAGTTGGGGAACAATTCAGATGCATCACCGAAAGTCTCCAATGTTTCTAATCGTATTGAAGAATCTTCATCTAGACTTAATGGGGCTTTGAAGATGCCTCTTTCGATACCGCCACCTCCTCCGCCACCACTGCCTCCTTCCCTAAGACTCTGGGAGACTCCAAGTCCTAAAACACCAGCTGGCCAACCAATCTGTAGACCTCCAGCTCTTATACCTCCTTCAAGGCCTTTCGTGTTTCAAAACCCAGGGAAGGTCTCTGTTTCACCAGTGCAGCTGCCACCCAGTTCTGCACCATTGGAGCCTATTGAGGAGACTCCGAAACCTAAGTTAAAGCCATTGCATTGGGATAAAGTTAGAGCTAGCTCTGACCGTGAAATGGTGTGGGATCAGCTAAGATCAAGCTCTTTCAAATTGAATGAAGAAATGATAGAGACATTGTTCGTTGTAAATACACCCAAACCGAATCCAAAGGAAACAACCCCACGCTCAGTTATTCCCTCACCTAAGCAAGAGAACAGAGTACTCGATCCTAAAAAGTCCCAGAATATTGCAATCTTGCTTAGGGCACTCAATGTGACCATAGAAGAAGTCTGTGAAGCGCTCATAGAAGGTAATGCAGATGCTCTAGGAACTGAATTACTTGAAAGTCTATTGAAGATGGCTCCAACCAAAGAAGAAGAGCGTAAGCTGAAGGAGTACAAAGATGATTCACCAGTTAAGCTTGGCCCTGCCGAGAAATTTCTGAAAGAACTGCTTGATGTTCCTTTTGCATTTAAAAGGGTTGAGGCAATGCTTTACATGACTAATTTTGAATCTGAAATCGAATACCTGAAAAAGTCTTTCGAAACTCTAGAGGCTGCCTGTGAAGAATTGAGAAATAGTAGGATGTTCTTGAAGCTTTTAGAGGCTGTGCTCAAGACTGGAAACAGAATGAATGTTGGGACAAACCGCGGTGATGCCCATGCCTTCAAACTTGACACACTCCTCAAGCTTGCTGACGTTAAGGGAGCAGATGGGCAAACCACGCTTTTGCATTTTGTTGTACAGGAAATCATAAGAACTGAAGGTGCTCGTCTCATTGGTGGTCAAACTTCATCAAACACAGCTTTGAATGATGATGCCAAGTGTAGGAGACTTGGCCTGCCAGTTGTTTCAGGTCTCAGTTCAGACCTCACTAATGTCAAGAAAGCTGCTGCCATGGACTCTGATGTGCTTAGCGGTGAAGTTTTTAAGCTTTCTAGAGGTATTAGTAACATTGGGGAGGTTGTGCAATTAGCTGAGACAAAGGTGTCAGGTGGAAGCAGCGGGAAATTTGCAGAGTCCATGACCATGTTCATGAAAATGGCCGAGGAGGAGATTATAAGACTTCAAGCTCAAGAAAGTGTTGCCTTGTCCTTGGTGAAGGAGATCACAGAGTACTTCCATGGGAATTCCGCTAGGGAAGAAGCTCACCCATTTCGAATCTTCATGGTAGTGAGAGACTTTCTAACAGTTCTTGATCGGGTATGTAAGGAAGTTGGTCTGATAAACGAGCGAACCATTGTTAGTAATGCCCAAAAGTTCCCAGTTCCAGTAAATCCCATGCTACAGCAACAAGTATTTCCAGTAAACCCAATGCTACCGCAAGTTCTCCCTGGAATCCATGGCAGGCGACCCTACGATTCATCCGATGATGAGAGTACGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003779 GO:0005488 GO:0005515 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0006996 GO:0007010 GO:0007015 GO:0008064 GO:0008092 GO:0008150 GO:0009987 GO:0010638 GO:0010639 GO:0016020 GO:0016043 GO:0030029 GO:0030036 GO:0030312 GO:0030832 GO:0030833 GO:0030834 GO:0030835 GO:0030837 GO:0030838 GO:0031333 GO:0031334 GO:0032271 GO:0032272 GO:0032273 GO:0032535 GO:0032956 GO:0032970 GO:0033043 GO:0043242 GO:0043244 GO:0043254 GO:0044087 GO:0044089 GO:0044464 GO:0044877 GO:0045010 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051015 GO:0051016 GO:0051128 GO:0051129 GO:0051130 GO:0051493 GO:0051494 GO:0051495 GO:0051693 GO:0065007 GO:0065008 GO:0071840 GO:0071944 GO:0090066 GO:0097435 GO:0110053 GO:1901879 GO:1901880 GO:1902903 GO:1902904 GO:1902905

KEGG Pathways

Metabolic & Signaling

ko04320 map04320

Pfam Domains

Protein Families

FH2

Protein Analysis

1104

Amino Acids

119.94

Weight (kDa)

6.31

Isoelectric Point (pI)

79.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FH2	PF02181	647 - 1042	1.5e-122	Formin Homology 2 Domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0007674)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G25500
fragaria_vesca	FvH4_2g17360 FvH4_2g17360 FvH4_2g17360
malus_domestica	MD05G1152500.v1.1 MD10G1147000.v1.1
prunus_persica	Prupe.8G185400_v2.0.a1
pyrus_communis	pycom05g14690 pycom10g12670
rosa_chinensis	RchiOBHm_Chr6g0281991
rosa_laevigata	RLG00000012921
rosa_multiflora	Rmu_sc0000569.1_g000001 Rmu_sc0001255.1_g000001 Rmu_sc0011823.1_g000001
rosa_roxburghii	Rroxscaffold_7G00186650
rosa_rugosa	Rorug06G0144700
rosa_samantha	Rh4CG162200 Rh4CG270300 Rh6AG257900 Rh6BG260900 Rh6CG259800 Rh6DG252200 Rh7AG416400
rosa_wichuraiana	Rw6G022300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2990
AarI	CACCTGC	1 cut(s)	322
AasI	GACNNNNNNGTC	1 cut(s)	2917
AatII	GACGTC	1 cut(s)	899
Acc36I	ACCTGC	1 cut(s)	322
AccB1I	GGYRCC	1 cut(s)	310
AccBSI	CCGCTC	1 cut(s)	510
AccI	GTMKAC	2 cut(s)	648, 1825
AccII	CGCG	8 cut(s)	594, 609, 621, 629, 838, 851, 1334, 2580
AccIII	TCCGGA	2 cut(s)	534, 1141
AcoI	YGGCCR	7 cut(s)	258, 279, 852, 861, 1266, 1810, 2973
AcsI	RAATTY	4 cut(s)	919, 2366, 2939, 3058
AcuI	CTGAAG	5 cut(s)	186, 1380, 1461, 2339, 2712
AcyI	GRCGYC	3 cut(s)	896, 1070, 1610
AfaI	GTAC	6 cut(s)	173, 2151, 2327, 2673, 3047, 3310
AfeI	AGCGCT	1 cut(s)	2229
AfiI	CCNNNNNNNGG	9 cut(s)	69, 448, 519, 577, 1481, 1502, 1879, 2005, 2757
AflIII	ACRYGT	1 cut(s)	1332
AhdI	GACNNNNNGTC	2 cut(s)	1090, 1791
AjnI	CCWGG	3 cut(s)	306, 1873, 3262
AjuI	GAANNNNNNNTTGG	2 cut(s)	93, 125
Alw21I	GWGCWC	6 cut(s)	617, 695, 905, 911, 2544, 2701
AlwNI	CAGNNNCTG	4 cut(s)	708, 1030, 1045, 1183
Ama87I	CYCGRG	2 cut(s)	872, 1007
Aor13HI	TCCGGA	2 cut(s)	534, 1141
Aor51HI	AGCGCT	1 cut(s)	2229
ApaI	GGGCCC	1 cut(s)	526
ApeKI	GCWGC	9 cut(s)	516, 1024, 1174, 1900, 1903, 2486, 2819, 2822, 2931
ApoI	RAATTY	4 cut(s)	919, 2366, 2939, 3058
ArsI	GACNNNNNNTTYG	2 cut(s)	1571, 1603
AspLEI	GCGC	4 cut(s)	423, 609, 629, 2230
AspS9I	GGNCC	8 cut(s)	522, 523, 537, 658, 741, 934, 1485, 2354
AsuC2I	CCSGG	5 cut(s)	257, 278, 937, 1265, 1270
AsuII	TTCGAA	3 cut(s)	1358, 2472, 3088
AsuNHI	GCTAGC	1 cut(s)	1988
AvaI	CYCGRG	2 cut(s)	872, 1007
AvaII	GGWCC	4 cut(s)	537, 658, 741, 1485
BaeGI	GKGCMC	2 cut(s)	526, 2197
BalI	TGGCCA	1 cut(s)	1812
BamHI	GGATCC	2 cut(s)	75, 1573
BanI	GGYRCC	1 cut(s)	310
BanII	GRGCYC	3 cut(s)	526, 617, 1520
BauI	CACGAG	1 cut(s)	904
BbsI	GAAGAC	8 cut(s)	391, 906, 991, 1005, 1203, 1278, 1419, 1605
Bbv12I	GWGCWC	6 cut(s)	617, 695, 905, 911, 2544, 2701
BbvI	GCAGC	9 cut(s)	528, 1036, 1186, 1890, 1912, 2473, 2806, 2809, 2943
BccI	CCATC	7 cut(s)	374, 997, 1111, 1249, 1475, 2281, 2636
BceAI	ACGGC	7 cut(s)	338, 359, 368, 380, 396, 839, 1057
BciT130I	CCWGG	3 cut(s)	308, 1875, 3264
BcnI	CCSGG	5 cut(s)	257, 278, 937, 1265, 1270
BfaI	CTAG	7 cut(s)	66, 1701, 1989, 2255, 2480, 2868, 3066
BfmI	CTRYAG	3 cut(s)	463, 1822, 3215
BfoI	RGCGCY	1 cut(s)	2231
BfuAI	ACCTGC	1 cut(s)	322
BglI	GCCNNNNNGGC	1 cut(s)	860
BlpI	GCTNAGC	2 cut(s)	1053, 2843
BmcAI	AGTACT	2 cut(s)	2151, 3047
Bme1390I	CCNGG	8 cut(s)	257, 278, 308, 937, 1265, 1270, 1875, 3264
Bme18I	GGWCC	4 cut(s)	537, 658, 741, 1485
BmeRI	GACNNNNNGTC	2 cut(s)	1090, 1791
BmeT110I	CYCGRG	2 cut(s)	872, 1007
BmgT120I	GGNCC	8 cut(s)	522, 523, 537, 658, 741, 934, 1485, 2354
BmrFI	CCNGG	8 cut(s)	257, 278, 308, 937, 1265, 1270, 1875, 3264
BmrI	ACTGGG	3 cut(s)	1514, 1905, 3188
BmsI	GCATC	8 cut(s)	1256, 1535, 1639, 1661, 1713, 2239, 2575, 2737
BmtI	GCTAGC	1 cut(s)	1992
BmuI	ACTGGG	3 cut(s)	1514, 1905, 3188
BpiI	GAAGAC	8 cut(s)	391, 906, 991, 1005, 1203, 1278, 1419, 1605
BplI	GAGNNNNNCTC	2 cut(s)	764, 796
BpmI	CTGGAG	4 cut(s)	496, 647, 1151, 1815
Bpu10I	CCTNAGC	2 cut(s)	2133, 2189
Bpu1102I	GCTNAGC	2 cut(s)	1053, 2843
Bpu14I	TTCGAA	3 cut(s)	1358, 2472, 3088
BpuEI	CTTGAG	3 cut(s)	2528, 2600, 2988
BpuMI	CCSGG	5 cut(s)	257, 278, 937, 1265, 1270
Bsa29I	ATCGAT	1 cut(s)	1555
BsaAI	YACGTR	1 cut(s)	3312
BsaHI	GRCGYC	3 cut(s)	896, 1070, 1610
BsaI	GGTCTC	3 cut(s)	1278, 1888, 2792
BsaWI	WCCGGW	9 cut(s)	534, 724, 743, 797, 923, 1141, 1432, 1495, 1621
BsaXI	ACNNNNNCTCC	4 cut(s)	275, 305, 1616, 1646
Bsc4I	CCNNNNNNNGG	9 cut(s)	69, 448, 519, 577, 1481, 1502, 1879, 2005, 2757
Bse118I	RCCGGY	7 cut(s)	69, 417, 539, 733, 863, 931, 1117
Bse3DI	GCAATG	3 cut(s)	508, 1964, 2424
BseAI	TCCGGA	2 cut(s)	534, 1141
BseBI	CCWGG	3 cut(s)	308, 1875, 3264
BseCI	ATCGAT	1 cut(s)	1555
BseGI	GGATG	2 cut(s)	2520, 3293
BseLI	CCNNNNNNNGG	9 cut(s)	69, 448, 519, 577, 1481, 1502, 1879, 2005, 2757
BseMI	GCAATG	3 cut(s)	508, 1964, 2424
BseMII	CTCAG	6 cut(s)	715, 1044, 1190, 2130, 2803, 2898
BseSI	GKGCMC	2 cut(s)	526, 2197
BseX3I	CGGCCG	2 cut(s)	852, 1266
BseXI	GCAGC	9 cut(s)	528, 1036, 1186, 1890, 1912, 2473, 2806, 2809, 2943
BsgI	GTGCAG	4 cut(s)	28, 694, 1902, 1919
Bsh1236I	CGCG	8 cut(s)	594, 609, 621, 629, 838, 851, 1334, 2580
Bsh1285I	CGRYCG	5 cut(s)	582, 855, 941, 1190, 1269
BshNI	GGYRCC	1 cut(s)	310
BshVI	ATCGAT	1 cut(s)	1555
BsiEI	CGRYCG	5 cut(s)	582, 855, 941, 1190, 1269
BsiHKAI	GWGCWC	6 cut(s)	617, 695, 905, 911, 2544, 2701
BsiHKCI	CYCGRG	2 cut(s)	872, 1007
BslFI	GGGAC	3 cut(s)	667, 2152, 2584
BslI	CCNNNNNNNGG	9 cut(s)	69, 448, 519, 577, 1481, 1502, 1879, 2005, 2757
BsmBI	CGTCTC	4 cut(s)	141, 741, 1341, 2708
BsmFI	GGGAC	3 cut(s)	667, 2152, 2584
Bso31I	GGTCTC	3 cut(s)	1278, 1888, 2792
BsoBI	CYCGRG	2 cut(s)	872, 1007
Bsp119I	TTCGAA	3 cut(s)	1358, 2472, 3088
Bsp120I	GGGCCC	1 cut(s)	522
Bsp1286I	GDGCHC	9 cut(s)	526, 617, 695, 905, 911, 1520, 2197, 2544, 2701
Bsp13I	TCCGGA	2 cut(s)	534, 1141
Bsp1407I	TGTACA	1 cut(s)	2671
Bsp1720I	GCTNAGC	2 cut(s)	1053, 2843
Bsp19I	CCATGG	3 cut(s)	2826, 3052, 3271
BspCNI	CTCAG	6 cut(s)	714, 1045, 1191, 2129, 2802, 2899
BspDI	ATCGAT	1 cut(s)	1555
BspEI	TCCGGA	2 cut(s)	534, 1141
BspFNI	CGCG	8 cut(s)	594, 609, 621, 629, 838, 851, 1334, 2580
BspHI	TCATGA	1 cut(s)	2964
BspMI	ACCTGC	1 cut(s)	322
BspOI	GCTAGC	1 cut(s)	1992
BspQI	GCTCTTC	2 cut(s)	1508, 2301
BspT104I	TTCGAA	3 cut(s)	1358, 2472, 3088
BspT107I	GGYRCC	1 cut(s)	310
BspTNI	GGTCTC	3 cut(s)	1278, 1888, 2792
BsrBI	CCGCTC	1 cut(s)	510
BsrDI	GCAATG	3 cut(s)	508, 1964, 2424
BsrFI	RCCGGY	7 cut(s)	69, 417, 539, 733, 863, 931, 1117
BsrGI	TGTACA	1 cut(s)	2671
BssAI	RCCGGY	7 cut(s)	69, 417, 539, 733, 863, 931, 1117
BssNI	GRCGYC	3 cut(s)	896, 1070, 1610
BssSI	CACGAG	1 cut(s)	904
BssT1I	CCWWGG	4 cut(s)	2826, 3024, 3052, 3271
Bst2BI	CACGAG	1 cut(s)	904
Bst2UI	CCWGG	3 cut(s)	308, 1875, 3264
Bst4CI	ACNGT	5 cut(s)	580, 806, 1090, 2000, 3121
Bst6I	CTCTTC	6 cut(s)	114, 256, 750, 765, 1508, 2301
BstACI	GRCGYC	3 cut(s)	896, 1070, 1610
BstAPI	GCANNNNNTGC	2 cut(s)	1030, 1183
BstAUI	TGTACA	1 cut(s)	2671
BstBAI	YACGTR	1 cut(s)	3312
BstBI	TTCGAA	3 cut(s)	1358, 2472, 3088
BstDSI	CCRYGG	6 cut(s)	592, 855, 2578, 2826, 3052, 3271
BstEII	GGTNACC	1 cut(s)	800
BstF5I	GGATG	2 cut(s)	2520, 3293
BstFNI	CGCG	8 cut(s)	594, 609, 621, 629, 838, 851, 1334, 2580
BstH2I	RGCGCY	1 cut(s)	2231
BstHHI	GCGC	4 cut(s)	423, 609, 629, 2230
BstMCI	CGRYCG	5 cut(s)	582, 855, 941, 1190, 1269
BstNI	CCWGG	3 cut(s)	308, 1875, 3264
BstPI	GGTNACC	1 cut(s)	800
BstSCI	CCNGG	8 cut(s)	255, 276, 306, 935, 1263, 1268, 1873, 3262
BstSFI	CTRYAG	3 cut(s)	463, 1822, 3215
BstSLI	GKGCMC	2 cut(s)	526, 2197
BstSNI	TACGTA	1 cut(s)	3312
BstUI	CGCG	8 cut(s)	594, 609, 621, 629, 838, 851, 1334, 2580
BstV1I	GCAGC	9 cut(s)	528, 1036, 1186, 1890, 1912, 2473, 2806, 2809, 2943
BstV2I	GAAGAC	8 cut(s)	391, 906, 991, 1005, 1203, 1278, 1419, 1605
BstX2I	RGATCY	4 cut(s)	75, 467, 791, 1573
BstXI	CCANNNNNNTGG	1 cut(s)	1971
BstYI	RGATCY	4 cut(s)	75, 467, 791, 1573
BstZI	CGGCCG	2 cut(s)	852, 1266
Bsu15I	ATCGAT	1 cut(s)	1555
BsuTUI	ATCGAT	1 cut(s)	1555
BtgI	CCRYGG	6 cut(s)	592, 855, 2578, 2826, 3052, 3271
BtgZI	GCGATG	2 cut(s)	364, 1512
BtsCI	GGATG	2 cut(s)	2520, 3293
BtsI	GCAGTG	2 cut(s)	1043, 1757
BtsIMutI	CAGTG	5 cut(s)	695, 976, 1043, 1757, 1902
BveI	ACCTGC	1 cut(s)	322
CaiI	CAGNNNCTG	4 cut(s)	708, 1030, 1045, 1183
CciI	TCATGA	1 cut(s)	2964
CfoI	GCGC	4 cut(s)	423, 609, 629, 2230
Cfr10I	RCCGGY	7 cut(s)	69, 417, 539, 733, 863, 931, 1117
Cfr13I	GGNCC	8 cut(s)	522, 523, 537, 658, 741, 934, 1485, 2354
Cfr42I	CCGCGG	2 cut(s)	595, 2581
ClaI	ATCGAT	1 cut(s)	1555
CpoI	CGGWCCG	2 cut(s)	537, 741
CseI	GACGC	4 cut(s)	1078, 1323, 1340, 1599
Csp6I	GTAC	6 cut(s)	172, 2150, 2326, 2672, 3046, 3309
CspI	CGGWCCG	2 cut(s)	537, 741
CviQI	GTAC	6 cut(s)	172, 2150, 2326, 2672, 3046, 3309
DraI	TTTAAA	1 cut(s)	2404
DrdI	GACNNNNNNGTC	1 cut(s)	2917
DriI	GACNNNNNGTC	2 cut(s)	1090, 1791
DseDI	GACNNNNNNGTC	1 cut(s)	2917
EaeI	YGGCCR	7 cut(s)	258, 279, 852, 861, 1266, 1810, 2973
EagI	CGGCCG	2 cut(s)	852, 1266
Eam1104I	CTCTTC	6 cut(s)	114, 256, 750, 765, 1508, 2301
Eam1105I	GACNNNNNGTC	2 cut(s)	1090, 1791
EarI	CTCTTC	6 cut(s)	114, 256, 750, 765, 1508, 2301
EciI	GGCGGA	6 cut(s)	88, 111, 129, 361, 382, 1740
Ecl136II	GAGCTC	1 cut(s)	615
EclXI	CGGCCG	2 cut(s)	852, 1266
Eco105I	TACGTA	1 cut(s)	3312
Eco130I	CCWWGG	4 cut(s)	2826, 3024, 3052, 3271
Eco147I	AGGCCT	1 cut(s)	1855
Eco24I	GRGCYC	3 cut(s)	526, 617, 1520
Eco31I	GGTCTC	3 cut(s)	1278, 1888, 2792
Eco47I	GGWCC	4 cut(s)	537, 658, 741, 1485
Eco47III	AGCGCT	1 cut(s)	2229
Eco52I	CGGCCG	2 cut(s)	852, 1266
Eco53kI	GAGCTC	1 cut(s)	615
Eco57I	CTGAAG	5 cut(s)	186, 1380, 1461, 2339, 2712
Eco88I	CYCGRG	2 cut(s)	872, 1007
Eco91I	GGTNACC	1 cut(s)	800
EcoICRI	GAGCTC	1 cut(s)	615
EcoO109I	RGGNCCY	1 cut(s)	522
EcoO65I	GGTNACC	1 cut(s)	800
EcoRI	GAATTC	1 cut(s)	3058
EcoRII	CCWGG	3 cut(s)	306, 1873, 3262
EcoT14I	CCWWGG	4 cut(s)	2826, 3024, 3052, 3271
EcoT22I	ATGCAT	1 cut(s)	1654
EcoT38I	GRGCYC	3 cut(s)	526, 617, 1520
ErhI	CCWWGG	4 cut(s)	2826, 3024, 3052, 3271
Esp3I	CGTCTC	4 cut(s)	141, 741, 1341, 2708
FalI	AAGNNNNNCTT	4 cut(s)	93, 125, 2367, 2399
FaqI	GGGAC	3 cut(s)	667, 2152, 2584
FauI	CCCGC	8 cut(s)	238, 243, 512, 515, 599, 681, 692, 2927
FblI	GTMKAC	2 cut(s)	648, 1825
FokI	GGATG	2 cut(s)	2527, 3280
FriOI	GRGCYC	3 cut(s)	526, 617, 1520
FspBI	CTAG	7 cut(s)	66, 1701, 1989, 2255, 2480, 2868, 3066
GlaI	GCGC	4 cut(s)	422, 608, 628, 2229
GsuI	CTGGAG	4 cut(s)	496, 647, 1151, 1815
HaeII	RGCGCY	1 cut(s)	2231
HgaI	GACGC	4 cut(s)	1078, 1323, 1340, 1599
HhaI	GCGC	4 cut(s)	423, 609, 629, 2230
Hin1I	GRCGYC	3 cut(s)	896, 1070, 1610
Hin6I	GCGC	4 cut(s)	421, 607, 627, 2228
HinP1I	GCGC	4 cut(s)	421, 607, 627, 2228
HincII	GTYRAC	2 cut(s)	586, 649
HindII	GTYRAC	2 cut(s)	586, 649
HindIII	AAGCTT	5 cut(s)	811, 2348, 2525, 2618, 2861
Hpy166II	GTNNAC	5 cut(s)	586, 649, 929, 1826, 3238
Hpy8I	GTNNAC	5 cut(s)	586, 649, 929, 1826, 3238
Hpy99I	CGWCG	9 cut(s)	389, 417, 605, 898, 901, 1072, 1114, 1303, 1600
HpyCH4III	ACNGT	5 cut(s)	580, 806, 1090, 2000, 3121
HpyCH4IV	ACGT	3 cut(s)	896, 2628, 3311
HpySE526I	ACGT	3 cut(s)	896, 2628, 3311
Hsp92I	GRCGYC	3 cut(s)	896, 1070, 1610
HspAI	GCGC	4 cut(s)	421, 607, 627, 2228
Kpn2I	TCCGGA	2 cut(s)	534, 1141
KroI	GCCGGC	3 cut(s)	69, 417, 863
KroNI	GCCGGC	3 cut(s)	71, 419, 865
KspI	CCGCGG	2 cut(s)	595, 2581
LguI	GCTCTTC	2 cut(s)	1508, 2301
Lsp1109I	GCAGC	9 cut(s)	528, 1036, 1186, 1890, 1912, 2473, 2806, 2809, 2943
LweI	GCATC	8 cut(s)	1256, 1535, 1639, 1661, 1713, 2239, 2575, 2737
MaeI	CTAG	7 cut(s)	66, 1701, 1989, 2255, 2480, 2868, 3066
MaeII	ACGT	3 cut(s)	896, 2628, 3311
MaeIII	GTNAC	5 cut(s)	704, 800, 1491, 2203, 2879
MbiI	CCGCTC	1 cut(s)	510
MflI	RGATCY	4 cut(s)	75, 467, 791, 1573
MhlI	GDGCHC	9 cut(s)	526, 617, 695, 905, 911, 1520, 2197, 2544, 2701
MlsI	TGGCCA	1 cut(s)	1812
MluI	ACGCGT	1 cut(s)	1332
MluNI	TGGCCA	1 cut(s)	1812
MlyI	GAGTC	8 cut(s)	644, 1019, 1210, 1770, 1780, 1936, 2825, 2957
MmeI	TCCRAC	4 cut(s)	345, 612, 1091, 2318
Mox20I	TGGCCA	1 cut(s)	1812
Mph1103I	ATGCAT	1 cut(s)	1654
MreI	CGCCGGCG	1 cut(s)	417
MroI	TCCGGA	2 cut(s)	534, 1141
MroNI	GCCGGC	3 cut(s)	69, 417, 863
MscI	TGGCCA	1 cut(s)	1812
MseI	TTAA	6 cut(s)	1707, 1958, 2346, 2403, 2631, 2859
MslI	CAYNNNNRTG	4 cut(s)	2957, 2963, 2969, 3101
Msp20I	TGGCCA	1 cut(s)	1812
MspA1I	CMGCKG	8 cut(s)	519, 594, 679, 1052, 1808, 1903, 2580, 2934
MspR9I	CCNGG	8 cut(s)	257, 278, 308, 937, 1265, 1270, 1875, 3264
MvaI	CCWGG	3 cut(s)	308, 1875, 3264
MvnI	CGCG	8 cut(s)	594, 609, 621, 629, 838, 851, 1334, 2580
NaeI	GCCGGC	3 cut(s)	71, 419, 865
NciI	CCSGG	5 cut(s)	257, 278, 937, 1265, 1270
NcoI	CCATGG	3 cut(s)	2826, 3052, 3271
NgoMIV	GCCGGC	3 cut(s)	69, 417, 863
NheI	GCTAGC	1 cut(s)	1988
NmeAIII	GCCGAG	5 cut(s)	552, 810, 1179, 2386, 3001
NmuCI	GTSAC	3 cut(s)	800, 1491, 2203
NsiI	ATGCAT	1 cut(s)	1654
NspV	TTCGAA	3 cut(s)	1358, 2472, 3088
PaeR7I	CTCGAG	1 cut(s)	872
PagI	TCATGA	1 cut(s)	2964
PaqCI	CACCTGC	1 cut(s)	322
PasI	CCCWGGG	1 cut(s)	1874
PceI	AGGCCT	1 cut(s)	1855
PciSI	GCTCTTC	2 cut(s)	1508, 2301
PcsI	WCGNNNNNNNCGW	6 cut(s)	393, 579, 606, 902, 1355, 3294
PdiI	GCCGGC	3 cut(s)	71, 419, 865
PleI	GAGTC	8 cut(s)	644, 1018, 1209, 1770, 1780, 1936, 2825, 2956
PpsI	GAGTC	8 cut(s)	644, 1018, 1209, 1770, 1780, 1936, 2825, 2956
Ppu21I	YACGTR	1 cut(s)	3312
PsiI	TTATAA	1 cut(s)	2990
Psp124BI	GAGCTC	1 cut(s)	617
Psp6I	CCWGG	3 cut(s)	306, 1873, 3262
PspEI	GGTNACC	1 cut(s)	800
PspGI	CCWGG	3 cut(s)	306, 1873, 3262
PspOMI	GGGCCC	1 cut(s)	522
PspPI	GGNCC	8 cut(s)	522, 523, 537, 658, 741, 934, 1485, 2354
PstNI	CAGNNNCTG	4 cut(s)	708, 1030, 1045, 1183
PsuI	RGATCY	4 cut(s)	75, 467, 791, 1573
PvuII	CAGCTG	3 cut(s)	1052, 1808, 1903
RsaI	GTAC	6 cut(s)	173, 2151, 2327, 2673, 3047, 3310
RsaNI	GTAC	6 cut(s)	172, 2150, 2326, 2672, 3046, 3309
RseI	CAYNNNNRTG	4 cut(s)	2957, 2963, 2969, 3101
Rsr2I	CGGWCCG	2 cut(s)	537, 741
RsrII	CGGWCCG	2 cut(s)	537, 741
SacI	GAGCTC	1 cut(s)	617
SacII	CCGCGG	2 cut(s)	595, 2581
SalI	GTCGAC	1 cut(s)	647
SapI	GCTCTTC	2 cut(s)	1508, 2301
SaqAI	TTAA	6 cut(s)	1707, 1958, 2346, 2403, 2631, 2859
Sau96I	GGNCC	8 cut(s)	522, 523, 537, 658, 741, 934, 1485, 2354
ScaI	AGTACT	2 cut(s)	2151, 3047
SchI	GAGTC	8 cut(s)	644, 1019, 1210, 1770, 1780, 1936, 2825, 2957
ScrFI	CCNGG	8 cut(s)	257, 278, 308, 937, 1265, 1270, 1875, 3264
SduI	GDGCHC	9 cut(s)	526, 617, 695, 905, 911, 1520, 2197, 2544, 2701
SfaNI	GCATC	8 cut(s)	1256, 1535, 1639, 1661, 1713, 2239, 2575, 2737
SfcI	CTRYAG	3 cut(s)	463, 1822, 3215
SfiI	GGCCNNNNNGGCC	1 cut(s)	860
Sfr274I	CTCGAG	1 cut(s)	872
Sfr303I	CCGCGG	2 cut(s)	595, 2581
SfuI	TTCGAA	3 cut(s)	1358, 2472, 3088
SgrAI	CRCCGGYG	2 cut(s)	417, 1117
SgrBI	CCGCGG	2 cut(s)	595, 2581
SinI	GGWCC	4 cut(s)	537, 658, 741, 1485
SlaI	CTCGAG	1 cut(s)	872
SmiMI	CAYNNNNRTG	4 cut(s)	2957, 2963, 2969, 3101
SmlI	CTYRAG	4 cut(s)	872, 2543, 2615, 3003
SmoI	CTYRAG	4 cut(s)	872, 2543, 2615, 3003
SnaBI	TACGTA	1 cut(s)	3312
SseBI	AGGCCT	1 cut(s)	1855
SspI	AATATT	2 cut(s)	1138, 2176
SspMI	CTAG	7 cut(s)	66, 1701, 1989, 2255, 2480, 2868, 3066
SstI	GAGCTC	1 cut(s)	617
StuI	AGGCCT	1 cut(s)	1855
StyD4I	CCNGG	8 cut(s)	255, 276, 306, 935, 1263, 1268, 1873, 3262
StyI	CCWWGG	4 cut(s)	2826, 3024, 3052, 3271
TaaI	ACNGT	5 cut(s)	580, 806, 1090, 2000, 3121
TaiI	ACGT	3 cut(s)	899, 2631, 3314
TaqII	GACCGA	1 cut(s)	1339
TatI	WGTACW	4 cut(s)	2149, 2325, 2671, 3045
TauI	GCSGC	7 cut(s)	91, 365, 624, 627, 679, 854, 1117
Tru1I	TTAA	6 cut(s)	1707, 1958, 2346, 2403, 2631, 2859
Tru9I	TTAA	6 cut(s)	1707, 1958, 2346, 2403, 2631, 2859
TscAI	CASTG	5 cut(s)	695, 976, 1050, 1764, 1902
TseFI	GTSAC	3 cut(s)	800, 1491, 2203
TseI	GCWGC	9 cut(s)	516, 1024, 1174, 1900, 1903, 2486, 2819, 2822, 2931
Tsp45I	GTSAC	3 cut(s)	800, 1491, 2203
TspGWI	ACGGA	1 cut(s)	123
TspRI	CASTG	5 cut(s)	695, 976, 1050, 1764, 1902
VpaK11BI	GGWCC	4 cut(s)	537, 658, 741, 1485
XapI	RAATTY	4 cut(s)	919, 2366, 2939, 3058
XbaI	TCTAGA	3 cut(s)	1700, 2479, 2867
XhoI	CTCGAG	1 cut(s)	872
XmiI	GTMKAC	2 cut(s)	648, 1825
XspI	CTAG	7 cut(s)	66, 1701, 1989, 2255, 2480, 2868, 3066
ZraI	GACGTC	1 cut(s)	897
ZrmI	AGTACT	2 cut(s)	2151, 3047
Zsp2I	ATGCAT	1 cut(s)	1654

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.