AT3G30300

GDP-fucose protein O-fucosyltransferase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
11921096 .. 11924617
3522 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G30300.2

Sequence Viewer

Length: 2034 bp
ATGAAGGGAGAAGGTAAAGTCTTCTTGAAGTCGCGTATGAAATGGATTGGTCTTCTTGGTCTTGTTCTCTCTGCTTTCTCTCTTCTTGTCCATTTTCTTCTCGCTGGATTCACAGATGACTCAATCTCCGATTACTCTATCCCTGTCACTATCTTCTCTTGGAGACCTATCTTCGACAATCCCAGATTTGCCCGTCATACACCATTGTATAGAAGACTTTGGGGACCAACAAGACATGTAGAGACATTACTTCCTGATGCTAATCCTAGAGGTTTTCATTCAGATCCTCCTGCAAGGACAAATGGTTTTGTTTTTGTTAGAATACAAGGTGGTTTCCATGAGATTAGAAACTCGATTCCTGATGTTGTAGCTGTGTCTCGGCTTCTTAACGCCACTTTGGTGATTCCTGAGATACAATCAACAACTAGTAGCAAAGGGATTAGTTCACAGTTCAAGAGCTTTGCGTATTTGTACAATGAAGAACACTTCATGGCTACAATTGCAAATGATGTTAGAGTTGTTAAAACTCTTCCCAAGAATCTCAAATGGGCTAGAAGAAAGAAACAGATTCCTTCTTTTAAAGTCTCTTACGGATCTTCACCTTATTACTACTTACATCATGTTCTACCTGTTCTTATTAAACACTCGGTCGTTGAACTAGTTGTCCCGCACGGTGGATGCTTACAAGCTATACTTCCTAGTGATCTTGAAGAATATCAGAGGTTACGGTGTAGAGTTGCTTTCCACGGTTTACAATTTAGGAAAGAGGTTCAAGAACTTTCCACTAAAGTATTACAAAGGCTGAGACCGTTAGGACGACCTTTCATAGCTTATGATCCAGGGATGACAAGAGAAGCTTTGGCCTATCATGGTTGTGCTGAACTGTTCCAGGATGTTCATACCGAGCTGATTCAACATAAACGAGCTTGGATGATAAAACGTGGTATTGTCAAAGGGAAGCTCTCTGTAGACTCAGCCGAGCAACGCCTCGCGGGGTTATGTCCTCTTATGCCAGAAGAAGTTGGTATTCTTTTACGAGCTTATGGATACTCATGGGATACAATCATATATGTCGCTGGGGGAGAGGTTTTTGGTGGGCAGAGAACGTTAATTCCTTTACATGGTATGTTTGAGAATGTCGTTGACCGTACTTCTCTAAGTACTAGCTGGGAGCTTGCTAAAATGTATGGGCGTGAGGCAAAGCATAATGATATCAAGAAAATGACACCTCCTTCGATCGAGGTAGAAACGAAACATGATTCATTGAAAAGCACAAGACAAAGACCTCAACCGCTTCCACCTCCACCAGCTAGACCAAAGTACTACAACATCGAAGGTTGGTGGGGTTGGGTAGCCGAGAGTGACAACGAGCCCGAAAGCACGGTTATTGAGTTGAGAACTAATGCCCATAAGTTGTTGTGGGAAGCGATAGATTACGTTGTTAGCGTGGAAGCAGATGTGTTTATCTCGGGTTTTGATCGCGATGGGAAAGGACATCCGAGTTTCGCTAGTTTGGTCATGGGACACCGGCTTTATCAGTCTGCTTCTGCTAAAACATTTAGACCAGACAGGAAACAAATTGCAATGCTTTTGGAAGAGATTCGAGACCATATGTACGAGGCGAATCACACTTGGATAACATCAGTTAGGAAGCTACTAAAGAGAAGCATACTCGAGGGTCTAATGGAATCTTCCAAAAGATCAAAAGCATTTAGTTTTCTTTCCCATCCTGTACCCGAATGTTCTTGCATTACGCGAACCCATCCGGTTTCAAATGCCACAAATCTTGGGGTGACACACCGTTGTCCGCAATGGGTGGATGGTGCTGTAAGCGAAAGATTAAAGGAGTATAAGAACGCAGAGAAAGAAGAGGATCTTGATGAAGAGGACTTGTCTTCTTCAGGATTGTTCTTTGGTCACAAGGAAAGTGGAGGGAATAATAATGGTAACAATGAGACTGTAAATTCCGAAGCTAACAATAAGGAAGAAGGTCAGCTTGAAGATCAAGAAGAACTTGAAGGCAGCGAAAGATAA

Protein Analysis

677

Amino Acids

76.9

Weight (kDa)

8.44

Isoelectric Point (pI)

45.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
O-FucT PF10250 103 - 404 4.6e-66 GDP-fucose protein O-fucosyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 969
AccII CGCG 4 cut(s) 34, 992, 1482, 1756
AciI CCGC 4 cut(s) 668, 992, 1292, 1808
AclI AACGTT 1 cut(s) 1106
AclWI GGATC 4 cut(s) 278, 601, 830, 1881
AcsI RAATTY 1 cut(s) 1963
AcuI CTGAAG 1 cut(s) 1884
AfaI GTAC 6 cut(s) 473, 1150, 1162, 1322, 1616, 1734
AfiI CCNNNNNNNGG 2 cut(s) 674, 1121
AflIII ACRYGT 1 cut(s) 235
AhlI ACTAGT 2 cut(s) 425, 658
AjnI CCWGG 2 cut(s) 838, 888
AleI CACNNNNGTG 1 cut(s) 398
AloI GAACNNNNNNTCC 4 cut(s) 648, 680, 1096, 1128
Alw26I GTCTC 7 cut(s) 157, 236, 381, 589, 799, 1599, 1949
AlwI GGATC 4 cut(s) 278, 601, 830, 1881
Ama87I CYCGRG 2 cut(s) 1468, 1673
AoxI GGCC 1 cut(s) 861
ApeKI GCWGC 1 cut(s) 2022
ApoI RAATTY 1 cut(s) 1963
ArsI GACNNNNNNTTYG 2 cut(s) 1216, 1248
Asp700I GAANNNNTTC 1 cut(s) 1599
AspS9I GGNCC 1 cut(s) 224
AsuHPI GGTGA 3 cut(s) 412, 591, 1804
AvaI CYCGRG 2 cut(s) 1468, 1673
AvaII GGWCC 1 cut(s) 224
BanII GRGCYC 1 cut(s) 1374
BbsI GAAGAC 4 cut(s) 13, 44, 220, 1887
BccI CCATC 4 cut(s) 1478, 1734, 1770, 1814
BciT130I CCWGG 2 cut(s) 840, 890
BciVI GTATCC 2 cut(s) 1040, 1051
BcoDI GTCTC 7 cut(s) 157, 236, 381, 589, 799, 1599, 1949
BcuI ACTAGT 2 cut(s) 425, 658
BfaI CTAG 8 cut(s) 267, 426, 552, 659, 699, 1164, 1311, 1509
BfmI CTRYAG 1 cut(s) 966
BfuI GTATCC 2 cut(s) 1040, 1051
BisI GCNGC 1 cut(s) 2023
BlsI GCNGC 1 cut(s) 2024
BmcAI AGTACT 2 cut(s) 1162, 1322
Bme1390I CCNGG 2 cut(s) 840, 890
Bme18I GGWCC 1 cut(s) 224
BmeT110I CYCGRG 2 cut(s) 1468, 1673
BmgT120I GGNCC 1 cut(s) 224
BmiI GGNNCC 1 cut(s) 225
BmrFI CCNGG 2 cut(s) 840, 890
BmsI GCATC 2 cut(s) 247, 668
BpiI GAAGAC 4 cut(s) 13, 44, 220, 1887
BsaBI GATNNNNATC 1 cut(s) 261
BsaI GGTCTC 3 cut(s) 157, 799, 1599
BsaJI CCNNGG 2 cut(s) 745, 839
BsaWI WCCGGW 1 cut(s) 1765
BsaXI ACNNNNNCTCC 2 cut(s) 110, 140
Bsc4I CCNNNNNNNGG 2 cut(s) 674, 1121
Bse118I RCCGGY 1 cut(s) 1527
Bse3DI GCAATG 2 cut(s) 1590, 1817
Bse8I GATNNNNATC 1 cut(s) 261
BseBI CCWGG 2 cut(s) 840, 890
BseDI CCNNGG 2 cut(s) 745, 839
BseGI GGATG 8 cut(s) 683, 849, 898, 936, 1495, 1726, 1762, 1825
BseJI GATNNNNATC 1 cut(s) 261
BseLI CCNNNNNNNGG 2 cut(s) 674, 1121
BseMI GCAATG 2 cut(s) 1590, 1817
BseMII CTCAG 3 cut(s) 399, 794, 987
BseYI CCCAGC 2 cut(s) 1076, 1167
Bsh1236I CGCG 4 cut(s) 34, 992, 1482, 1756
Bsh1285I CGRYCG 2 cut(s) 651, 1239
BshFI GGCC 1 cut(s) 863
BsiEI CGRYCG 2 cut(s) 651, 1239
BsiHKCI CYCGRG 2 cut(s) 1468, 1673
BsiSI CCGG 2 cut(s) 1528, 1766
BslFI GGGAC 3 cut(s) 237, 650, 1536
BslI CCNNNNNNNGG 2 cut(s) 674, 1121
BsmAI GTCTC 7 cut(s) 157, 236, 381, 589, 799, 1599, 1949
BsmFI GGGAC 3 cut(s) 237, 650, 1536
BsnI GGCC 1 cut(s) 863
Bso31I GGTCTC 3 cut(s) 157, 799, 1599
BsoBI CYCGRG 2 cut(s) 1468, 1673
Bsp1286I GDGCHC 1 cut(s) 1374
Bsp1407I TGTACA 1 cut(s) 471
Bsp143I GATC 9 cut(s) 283, 593, 703, 835, 1236, 1477, 1700, 1873, 2002
Bsp68I TCGCGA 1 cut(s) 1482
BspACI CCGC 4 cut(s) 668, 992, 1292, 1808
BspANI GGCC 1 cut(s) 863
BspCNI CTCAG 3 cut(s) 400, 795, 986
BspFNI CGCG 4 cut(s) 34, 992, 1482, 1756
BspLI GGNNCC 1 cut(s) 225
BspPI GGATC 4 cut(s) 278, 601, 830, 1881
BspTNI GGTCTC 3 cut(s) 157, 799, 1599
BsrDI GCAATG 2 cut(s) 1590, 1817
BsrFI RCCGGY 1 cut(s) 1527
BsrGI TGTACA 1 cut(s) 471
BssAI RCCGGY 1 cut(s) 1527
BssECI CCNNGG 2 cut(s) 745, 839
BssMI GATC 9 cut(s) 283, 593, 703, 835, 1236, 1477, 1700, 1873, 2002
Bst2UI CCWGG 2 cut(s) 840, 890
Bst6I CTCTTC 5 cut(s) 87, 534, 1590, 1863, 1878
BstAUI TGTACA 1 cut(s) 471
BstC8I GCNNGC 1 cut(s) 1176
BstDEI CTNAG 4 cut(s) 408, 803, 973, 1157
BstDSI CCRYGG 1 cut(s) 745
BstF5I GGATG 8 cut(s) 683, 849, 898, 936, 1495, 1726, 1762, 1825
BstFNI CGCG 4 cut(s) 34, 992, 1482, 1756
BstKTI GATC 9 cut(s) 286, 596, 706, 838, 1239, 1480, 1703, 1876, 2005
BstMAI GTCTC 7 cut(s) 157, 236, 381, 589, 799, 1599, 1949
BstMBI GATC 9 cut(s) 283, 593, 703, 835, 1236, 1477, 1700, 1873, 2002
BstMCI CGRYCG 2 cut(s) 651, 1239
BstMWI GCNNNNNNNGC 1 cut(s) 500
BstNI CCWGG 2 cut(s) 840, 890
BstNSI RCATGY 1 cut(s) 239
BstSCI CCNGG 2 cut(s) 838, 888
BstSFI CTRYAG 1 cut(s) 966
BstUI CGCG 4 cut(s) 34, 992, 1482, 1756
BstV2I GAAGAC 4 cut(s) 13, 44, 220, 1887
BstX2I RGATCY 3 cut(s) 283, 593, 1873
BstYI RGATCY 3 cut(s) 283, 593, 1873
BsuI GTATCC 2 cut(s) 1040, 1051
BsuRI GGCC 1 cut(s) 863
BtgI CCRYGG 1 cut(s) 745
BtgZI GCGATG 1 cut(s) 1497
BtsCI GGATG 8 cut(s) 683, 849, 898, 936, 1495, 1726, 1762, 1825
BtuMI TCGCGA 1 cut(s) 1482
Cac8I GCNNGC 1 cut(s) 1176
Cfr10I RCCGGY 1 cut(s) 1527
Cfr13I GGNCC 1 cut(s) 224
Csp6I GTAC 6 cut(s) 472, 1149, 1161, 1321, 1615, 1733
CspCI CAANNNNNGTGG 4 cut(s) 1768, 1803, 1909, 1944
CviAII CATG 9 cut(s) 236, 338, 490, 620, 869, 1053, 1121, 1256, 1519
CviQI GTAC 6 cut(s) 472, 1149, 1161, 1321, 1615, 1733
DdeI CTNAG 4 cut(s) 408, 803, 973, 1157
DpnI GATC 9 cut(s) 285, 595, 705, 837, 1238, 1479, 1702, 1875, 2004
DpnII GATC 9 cut(s) 283, 593, 703, 835, 1236, 1477, 1700, 1873, 2002
DraI TTTAAA 1 cut(s) 580
Eam1104I CTCTTC 5 cut(s) 87, 534, 1590, 1863, 1878
EarI CTCTTC 5 cut(s) 87, 534, 1590, 1863, 1878
Eco24I GRGCYC 1 cut(s) 1374
Eco31I GGTCTC 3 cut(s) 157, 799, 1599
Eco32I GATATC 1 cut(s) 1213
Eco47I GGWCC 1 cut(s) 224
Eco57I CTGAAG 1 cut(s) 1884
Eco88I CYCGRG 2 cut(s) 1468, 1673
EcoRII CCWGG 2 cut(s) 838, 888
EcoRV GATATC 1 cut(s) 1213
EcoT38I GRGCYC 1 cut(s) 1374
FaeI CATG 9 cut(s) 239, 341, 493, 623, 872, 1056, 1124, 1259, 1522
FaqI GGGAC 3 cut(s) 237, 650, 1536
FatI CATG 9 cut(s) 235, 337, 489, 619, 868, 1052, 1120, 1255, 1518
FauI CCCGC 2 cut(s) 675, 985
FauNDI CATATG 1 cut(s) 1611
FblI GTMKAC 1 cut(s) 969
Fnu4HI GCNGC 1 cut(s) 2023
FokI GGATG 8 cut(s) 690, 856, 905, 943, 1482, 1713, 1749, 1832
FriOI GRGCYC 1 cut(s) 1374
Fsp4HI GCNGC 1 cut(s) 2023
FspBI CTAG 8 cut(s) 267, 426, 552, 659, 699, 1164, 1311, 1509
GluI GCNGC 1 cut(s) 2023
GsaI CCCAGC 2 cut(s) 1080, 1171
HaeIII GGCC 1 cut(s) 863
HapII CCGG 2 cut(s) 1528, 1766
Hin1II CATG 9 cut(s) 239, 341, 493, 623, 872, 1056, 1124, 1259, 1522
HincII GTYRAC 1 cut(s) 1144
HindII GTYRAC 1 cut(s) 1144
HindIII AAGCTT 1 cut(s) 855
HpaII CCGG 2 cut(s) 1528, 1766
HphI GGTGA 3 cut(s) 412, 591, 1804
Hpy166II GTNNAC 4 cut(s) 446, 752, 970, 1144
Hpy188I TCNGA 5 cut(s) 130, 283, 720, 1500, 1969
Hpy8I GTNNAC 4 cut(s) 446, 752, 970, 1144
HpyAV CCTTC 6 cut(s) 5, 582, 1242, 1328, 1982, 2012
HpyCH4IV ACGT 3 cut(s) 940, 1106, 1437
HpyCH4V TGCA 4 cut(s) 293, 503, 1583, 1749
HpyF10VI GCNNNNNNNGC 1 cut(s) 500
HpyF3I CTNAG 4 cut(s) 408, 803, 973, 1157
HpySE526I ACGT 3 cut(s) 940, 1106, 1437
Hsp92II CATG 9 cut(s) 239, 341, 493, 623, 872, 1056, 1124, 1259, 1522
Kzo9I GATC 9 cut(s) 283, 593, 703, 835, 1236, 1477, 1700, 1873, 2002
LmnI GCTCC 1 cut(s) 1171
LweI GCATC 2 cut(s) 247, 668
MaeI CTAG 8 cut(s) 267, 426, 552, 659, 699, 1164, 1311, 1509
MaeII ACGT 3 cut(s) 940, 1106, 1437
MaeIII GTNAC 6 cut(s) 145, 723, 1361, 1792, 1916, 1946
MalI GATC 9 cut(s) 285, 595, 705, 837, 1238, 1479, 1702, 1875, 2004
MboI GATC 9 cut(s) 283, 593, 703, 835, 1236, 1477, 1700, 1873, 2002
MfeI CAATTG 1 cut(s) 498
MflI RGATCY 3 cut(s) 283, 593, 1873
MhlI GDGCHC 1 cut(s) 1374
MluCI AATT 5 cut(s) 498, 755, 1110, 1578, 1963
MlyI GAGTC 2 cut(s) 113, 965
MroXI GAANNNNTTC 1 cut(s) 1599
MseI TTAA 6 cut(s) 387, 522, 579, 639, 1109, 1841
MslI CAYNNNNRTG 2 cut(s) 398, 873
MspI CCGG 2 cut(s) 1528, 1766
MspR9I CCNGG 2 cut(s) 840, 890
MunI CAATTG 1 cut(s) 498
MvaI CCWGG 2 cut(s) 840, 890
MvnI CGCG 4 cut(s) 34, 992, 1482, 1756
MwoI GCNNNNNNNGC 1 cut(s) 500
NdeI CATATG 1 cut(s) 1611
NdeII GATC 9 cut(s) 283, 593, 703, 835, 1236, 1477, 1700, 1873, 2002
NlaIII CATG 9 cut(s) 239, 341, 493, 623, 872, 1056, 1124, 1259, 1522
NlaIV GGNNCC 1 cut(s) 225
NmeAIII GCCGAG 3 cut(s) 358, 1003, 1381
NmuCI GTSAC 4 cut(s) 145, 1361, 1792, 1916
NruI TCGCGA 1 cut(s) 1482
NspI RCATGY 1 cut(s) 239
OliI CACNNNNGTG 1 cut(s) 398
PaeR7I CTCGAG 1 cut(s) 1673
PciI ACATGT 1 cut(s) 235
PcsI WCGNNNNNNNCGW 1 cut(s) 1443
PdmI GAANNNNTTC 1 cut(s) 1599
PfoI TCCNGGA 1 cut(s) 888
PkrI GCNGC 1 cut(s) 2024
Ple19I CGATCG 1 cut(s) 1239
PleI GAGTC 2 cut(s) 113, 965
PpsI GAGTC 2 cut(s) 113, 965
PscI ACATGT 1 cut(s) 235
Psp1406I AACGTT 1 cut(s) 1106
Psp6I CCWGG 2 cut(s) 838, 888
PspFI CCCAGC 2 cut(s) 1076, 1167
PspGI CCWGG 2 cut(s) 838, 888
PspN4I GGNNCC 1 cut(s) 225
PspPI GGNCC 1 cut(s) 224
PspXI VCTCGAGB 1 cut(s) 1673
PsuI RGATCY 3 cut(s) 283, 593, 1873
PvuI CGATCG 1 cut(s) 1239
RruI TCGCGA 1 cut(s) 1482
RsaI GTAC 6 cut(s) 473, 1150, 1162, 1322, 1616, 1734
RsaNI GTAC 6 cut(s) 472, 1149, 1161, 1321, 1615, 1733
RseI CAYNNNNRTG 2 cut(s) 398, 873
SaqAI TTAA 6 cut(s) 387, 522, 579, 639, 1109, 1841
SatI GCNGC 1 cut(s) 2023
Sau3AI GATC 9 cut(s) 283, 593, 703, 835, 1236, 1477, 1700, 1873, 2002
Sau96I GGNCC 1 cut(s) 224
ScaI AGTACT 2 cut(s) 1162, 1322
SchI GAGTC 2 cut(s) 113, 965
ScrFI CCNGG 2 cut(s) 840, 890
SduI GDGCHC 1 cut(s) 1374
SfaNI GCATC 2 cut(s) 247, 668
SfcI CTRYAG 1 cut(s) 966
Sfr274I CTCGAG 1 cut(s) 1673
SinI GGWCC 1 cut(s) 224
SlaI CTCGAG 1 cut(s) 1673
SmiMI CAYNNNNRTG 2 cut(s) 398, 873
SmlI CTYRAG 1 cut(s) 1673
SmoI CTYRAG 1 cut(s) 1673
SpeI ACTAGT 2 cut(s) 425, 658
Sse9I AATT 5 cut(s) 498, 755, 1110, 1578, 1963
SsiI CCGC 4 cut(s) 668, 992, 1292, 1808
SspMI CTAG 8 cut(s) 267, 426, 552, 659, 699, 1164, 1311, 1509
StyD4I CCNGG 2 cut(s) 838, 888
TaiI ACGT 3 cut(s) 943, 1109, 1440
TaqI TCGA 7 cut(s) 174, 353, 1235, 1239, 1332, 1603, 1674
TaqII GACCGA 1 cut(s) 637
TasI AATT 5 cut(s) 498, 755, 1110, 1578, 1963
TatI WGTACW 3 cut(s) 471, 1160, 1320
Tru1I TTAA 6 cut(s) 387, 522, 579, 639, 1109, 1841
Tru9I TTAA 6 cut(s) 387, 522, 579, 639, 1109, 1841
TseFI GTSAC 4 cut(s) 145, 1361, 1792, 1916
TseI GCWGC 1 cut(s) 2022
Tsp45I GTSAC 4 cut(s) 145, 1361, 1792, 1916
TspDTI ATGAA 9 cut(s) 17, 53, 266, 478, 492, 814, 887, 1251, 1896
TspGWI ACGGA 1 cut(s) 606
VpaK11BI GGWCC 1 cut(s) 224
XapI RAATTY 1 cut(s) 1963
XceI RCATGY 1 cut(s) 239
XhoI CTCGAG 1 cut(s) 1673
XmiI GTMKAC 1 cut(s) 969
XmnI GAANNNNTTC 1 cut(s) 1599
XspI CTAG 8 cut(s) 267, 426, 552, 659, 699, 1164, 1311, 1509
ZrmI AGTACT 2 cut(s) 1162, 1322
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.