Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0005123

Physical Location & Seq

Genomic Coordinates Reverse (-)

16108100 .. 16111316

Gene Structure 3217 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G44510.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 660 bp

ATGGGTTCCTACACTGTTTGGAGCTGCCTTAAACATATTCCTCAAAGGTTAGCAGGAGTGGCAATGGTGGCTCCGGTGGTGAATTTCCGGTGGCCGTCTATTCCAAAGAGTCTGATGCCAAAAGACTACAGAAGAGAAGTGGCGAAATGGTCTGTTTGGATAGCTAACTATTTTCCGGGACTTTTGCAATGGTTGGTGACTCAGAACATGTTCTCTACAACTTCCATGCTAGAGAAAAACCCTGTCTACTTCAACGACCAAGACATTGAAGTCCTTAAGCACATCAAAGGCTTCCCAATGCTCACTAAGGAGAAGTTACGGGAGCGCGGCGTCTTCGGGACGCTGAGAAGCGATTTTTTGGTAGCATTCGGCGACTGGGACTTCGATCCGGCAGACCTACCTGACCCGTCTCTGTCTGGACCGGAAAAGGGCTCTTCTTCTGTTCACATATGGCAAGGCTACGAAGACAAAGTGATGCCATTTCAGCTGCAAAGATGTTTGTGCCGCAAGCTACCATGGATTAGGTACCATGAGGTCCCTAAAGGAGGCCACCTGATCGTGCACTACGACGGCATATGTGATGCGATTTTGAAATCACTTCTTTTAGGAGAAGATCTCCCAATGTACAAACCAAAAGCTGTGATCACTGAGCCAGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

Abhydrolase_1 Abhydrolase_6 Hydrolase_4

Protein Analysis

219

Amino Acids

25.15

Weight (kDa)

8.59

Isoelectric Point (pI)

52.4

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005123)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G44510 AT3G44510 AT3G44510 AT3G44510 AT3G44510
fragaria_vesca	FvH4_3g24760 FvH4_3g24760 FvH4_3g24760 FvH4_3g24760 FvH4_3g24760 FvH4_3g24760
malus_domestica	MD03G1143100.v1.1 MD11G1163900.v1.1
prunus_persica	Prupe.6G128600_v2.0.a1 Prupe.6G128600_v2.0.a1
pyrus_communis	pycom03g09800 pycom11g13540
rosa_chinensis	RchiOBHm_Chr5g0044341
rosa_laevigata	RLG00000034267
rosa_multiflora	Rmu_sc0004741.1_g000020 Rmu_sc0015666.1_g000011
rosa_roxburghii	Rroxscaffold_1G00036620
rosa_rugosa	Rorug05G0213400 Rorug05G0213500 Rorug05G0213600
rosa_samantha	Rh5AG297700 Rh5BG305100 Rh5CG332100 Rh5DG314300
rosa_wichuraiana	Rw5G027560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	269
Acc65I	GGTACC	1 cut(s)	525
AccB1I	GGYRCC	1 cut(s)	525
AccI	GTMKAC	1 cut(s)	246
AccII	CGCG	1 cut(s)	327
AciI	CCGC	2 cut(s)	327, 505
AclWI	GGATC	1 cut(s)	380
AcoI	YGGCCR	1 cut(s)	92
AcsI	RAATTY	1 cut(s)	82
AcyI	GRCGYC	1 cut(s)	330
AfaI	GTAC	2 cut(s)	527, 626
AfiI	CCNNNNNNNGG	2 cut(s)	428, 545
AflII	CTTAAG	1 cut(s)	275
AflIII	ACRYGT	1 cut(s)	207
AgsI	TTSAA	3 cut(s)	253, 269, 592
AluBI	AGCT	6 cut(s)	24, 164, 487, 511, 638, 656
AluI	AGCT	6 cut(s)	24, 164, 487, 511, 638, 656
Alw21I	GWGCWC	1 cut(s)	564
Alw26I	GTCTC	1 cut(s)	414
Alw44I	GTGCAC	1 cut(s)	560
AlwI	GGATC	1 cut(s)	380
AoxI	GGCC	2 cut(s)	92, 547
ApaLI	GTGCAC	1 cut(s)	560
ApeKI	GCWGC	2 cut(s)	24, 487
ApoI	RAATTY	1 cut(s)	82
ArsI	GACNNNNNNTTYG	2 cut(s)	365, 397
Asp700I	GAANNNNTTC	1 cut(s)	209
Asp718I	GGTACC	1 cut(s)	525
AspLEI	GCGC	1 cut(s)	327
AspS9I	GGNCC	2 cut(s)	419, 535
AsuC2I	CCSGG	1 cut(s)	177
AsuHPI	GGTGA	2 cut(s)	91, 208
AvaII	GGWCC	2 cut(s)	419, 535
BaeGI	GKGCMC	1 cut(s)	564
BanI	GGYRCC	1 cut(s)	525
BanII	GRGCYC	1 cut(s)	434
BbsI	GAAGAC	2 cut(s)	325, 471
Bbv12I	GWGCWC	1 cut(s)	564
BbvI	GCAGC	2 cut(s)	11, 474
BceAI	ACGGC	2 cut(s)	79, 586
BclI	TGATCA	1 cut(s)	642
BcnI	CCSGG	1 cut(s)	177
BcoDI	GTCTC	1 cut(s)	414
BfaI	CTAG	1 cut(s)	230
BfmI	CTRYAG	1 cut(s)	127
BfrI	CTTAAG	1 cut(s)	275
BglII	AGATCT	1 cut(s)	613
BisI	GCNGC	4 cut(s)	25, 328, 488, 505
BlsI	GCNGC	4 cut(s)	26, 329, 489, 506
Bme1390I	CCNGG	1 cut(s)	177
Bme18I	GGWCC	2 cut(s)	419, 535
BmgT120I	GGNCC	2 cut(s)	419, 535
BmiI	GGNNCC	4 cut(s)	7, 72, 527, 537
BmrFI	CCNGG	1 cut(s)	177
BmrI	ACTGGG	1 cut(s)	385
BmsI	GCATC	3 cut(s)	105, 465, 571
BmuI	ACTGGG	1 cut(s)	385
BpiI	GAAGAC	2 cut(s)	325, 471
BplI	GAGNNNNNCTC	2 cut(s)	600, 632
BpuMI	CCSGG	1 cut(s)	177
BsaHI	GRCGYC	1 cut(s)	330
BsaJI	CCNNGG	1 cut(s)	515
BsaWI	WCCGGW	3 cut(s)	73, 87, 421
Bsc4I	CCNNNNNNNGG	2 cut(s)	428, 545
Bse1I	ACTGG	1 cut(s)	380
Bse3DI	GCAATG	2 cut(s)	69, 194
BseDI	CCNNGG	1 cut(s)	515
BseLI	CCNNNNNNNGG	2 cut(s)	428, 545
BseMI	GCAATG	2 cut(s)	69, 194
BseMII	CTCAG	3 cut(s)	215, 335, 639
BseNI	ACTGG	1 cut(s)	380
BseSI	GKGCMC	1 cut(s)	564
BseXI	GCAGC	2 cut(s)	11, 474
Bsh1236I	CGCG	1 cut(s)	327
BshFI	GGCC	2 cut(s)	94, 549
BshNI	GGYRCC	1 cut(s)	525
BsiHKAI	GWGCWC	1 cut(s)	564
BsiSI	CCGG	5 cut(s)	74, 88, 176, 389, 422
BslFI	GGGAC	4 cut(s)	192, 352, 392, 521
BslI	CCNNNNNNNGG	2 cut(s)	428, 545
BsmAI	GTCTC	1 cut(s)	414
BsmBI	CGTCTC	1 cut(s)	414
BsmFI	GGGAC	4 cut(s)	192, 352, 392, 521
BsmI	GAATGC	1 cut(s)	365
BsnI	GGCC	2 cut(s)	94, 549
Bsp1286I	GDGCHC	2 cut(s)	434, 564
Bsp1407I	TGTACA	1 cut(s)	624
Bsp143I	GATC	4 cut(s)	385, 555, 613, 642
Bsp19I	CCATGG	1 cut(s)	515
BspACI	CCGC	2 cut(s)	327, 505
BspANI	GGCC	2 cut(s)	94, 549
BspCNI	CTCAG	3 cut(s)	214, 336, 640
BspFNI	CGCG	1 cut(s)	327
BspLI	GGNNCC	4 cut(s)	7, 72, 527, 537
BspPI	GGATC	1 cut(s)	380
BspQI	GCTCTTC	1 cut(s)	439
BspT107I	GGYRCC	1 cut(s)	525
BspTI	CTTAAG	1 cut(s)	275
BsrDI	GCAATG	2 cut(s)	69, 194
BsrGI	TGTACA	1 cut(s)	624
BsrI	ACTGG	1 cut(s)	380
BssECI	CCNNGG	1 cut(s)	515
BssMI	GATC	4 cut(s)	385, 555, 613, 642
BssNI	GRCGYC	1 cut(s)	330
BssT1I	CCWWGG	1 cut(s)	515
Bst4CI	ACNGT	1 cut(s)	16
Bst6I	CTCTTC	2 cut(s)	127, 439
BstACI	GRCGYC	1 cut(s)	330
BstAFI	CTTAAG	1 cut(s)	275
BstAUI	TGTACA	1 cut(s)	624
BstC8I	GCNNGC	2 cut(s)	509, 654
BstDEI	CTNAG	5 cut(s)	201, 306, 344, 648, 657
BstDSI	CCRYGG	1 cut(s)	515
BstENI	CCTNNNNNAGG	1 cut(s)	543
BstFNI	CGCG	1 cut(s)	327
BstHHI	GCGC	1 cut(s)	327
BstKTI	GATC	4 cut(s)	388, 558, 616, 645
BstMAI	GTCTC	1 cut(s)	414
BstMBI	GATC	4 cut(s)	385, 555, 613, 642
BstMWI	GCNNNNNNNGC	3 cut(s)	59, 68, 484
BstNSI	RCATGY	1 cut(s)	211
BstSCI	CCNGG	1 cut(s)	175
BstSFI	CTRYAG	1 cut(s)	127
BstSLI	GKGCMC	1 cut(s)	564
BstUI	CGCG	1 cut(s)	327
BstV1I	GCAGC	2 cut(s)	11, 474
BstV2I	GAAGAC	2 cut(s)	325, 471
BstX2I	RGATCY	1 cut(s)	613
BstYI	RGATCY	1 cut(s)	613
BsuRI	GGCC	2 cut(s)	94, 549
BtgI	CCRYGG	1 cut(s)	515
BtsIMutI	CAGTG	2 cut(s)	12, 645
Cac8I	GCNNGC	2 cut(s)	509, 654
CfoI	GCGC	1 cut(s)	327
Cfr13I	GGNCC	2 cut(s)	419, 535
CseI	GACGC	2 cut(s)	319, 349
Csp6I	GTAC	2 cut(s)	526, 625
CviAII	CATG	4 cut(s)	208, 226, 516, 530
CviQI	GTAC	2 cut(s)	526, 625
DdeI	CTNAG	5 cut(s)	201, 306, 344, 648, 657
DpnI	GATC	4 cut(s)	387, 557, 615, 644
DpnII	GATC	4 cut(s)	385, 555, 613, 642
DrdI	GACNNNNNNGTC	1 cut(s)	269
DseDI	GACNNNNNNGTC	1 cut(s)	269
EaeI	YGGCCR	1 cut(s)	92
Eam1104I	CTCTTC	2 cut(s)	127, 439
EarI	CTCTTC	2 cut(s)	127, 439
Eco130I	CCWWGG	1 cut(s)	515
Eco24I	GRGCYC	1 cut(s)	434
Eco47I	GGWCC	2 cut(s)	419, 535
EcoNI	CCTNNNNNAGG	1 cut(s)	543
EcoO109I	RGGNCCY	1 cut(s)	535
EcoT14I	CCWWGG	1 cut(s)	515
EcoT38I	GRGCYC	1 cut(s)	434
ErhI	CCWWGG	1 cut(s)	515
Esp3I	CGTCTC	1 cut(s)	414
FaeI	CATG	4 cut(s)	211, 229, 519, 533
FaiI	YATR	9 cut(s)	36, 209, 227, 449, 451, 517, 531, 575, 577
FaqI	GGGAC	4 cut(s)	192, 352, 392, 521
FatI	CATG	4 cut(s)	207, 225, 515, 529
FauNDI	CATATG	2 cut(s)	449, 575
FbaI	TGATCA	1 cut(s)	642
FblI	GTMKAC	1 cut(s)	246
Fnu4HI	GCNGC	4 cut(s)	25, 328, 488, 505
FriOI	GRGCYC	1 cut(s)	434
Fsp4HI	GCNGC	4 cut(s)	25, 328, 488, 505
FspBI	CTAG	1 cut(s)	230
GlaI	GCGC	1 cut(s)	326
GluI	GCNGC	4 cut(s)	25, 328, 488, 505
HaeIII	GGCC	2 cut(s)	94, 549
HapII	CCGG	5 cut(s)	74, 88, 176, 389, 422
HgaI	GACGC	2 cut(s)	319, 349
HhaI	GCGC	1 cut(s)	327
Hin1I	GRCGYC	1 cut(s)	330
Hin1II	CATG	4 cut(s)	211, 229, 519, 533
Hin6I	GCGC	1 cut(s)	325
HinP1I	GCGC	1 cut(s)	325
HinfI	GANTC	2 cut(s)	109, 199
HpaII	CCGG	5 cut(s)	74, 88, 176, 389, 422
HphI	GGTGA	2 cut(s)	91, 208
Hpy166II	GTNNAC	3 cut(s)	247, 445, 562
Hpy188I	TCNGA	2 cut(s)	114, 204
Hpy188III	TCNNGA	2 cut(s)	337, 417
Hpy8I	GTNNAC	3 cut(s)	247, 445, 562
Hpy99I	CGWCG	1 cut(s)	572
HpyCH4III	ACNGT	1 cut(s)	16
HpyCH4V	TGCA	3 cut(s)	187, 490, 562
HpyF10VI	GCNNNNNNNGC	3 cut(s)	59, 68, 484
HpyF3I	CTNAG	5 cut(s)	201, 306, 344, 648, 657
Hsp92I	GRCGYC	1 cut(s)	330
Hsp92II	CATG	4 cut(s)	211, 229, 519, 533
HspAI	GCGC	1 cut(s)	325
KpnI	GGTACC	1 cut(s)	529
Ksp22I	TGATCA	1 cut(s)	642
Kzo9I	GATC	4 cut(s)	385, 555, 613, 642
LguI	GCTCTTC	1 cut(s)	439
LmnI	GCTCC	3 cut(s)	21, 76, 322
Lsp1109I	GCAGC	2 cut(s)	11, 474
LweI	GCATC	3 cut(s)	105, 465, 571
MaeI	CTAG	1 cut(s)	230
MaeIII	GTNAC	2 cut(s)	196, 315
MalI	GATC	4 cut(s)	387, 557, 615, 644
MboI	GATC	4 cut(s)	385, 555, 613, 642
MboII	GAAGA	6 cut(s)	144, 325, 426, 429, 476, 623
MflI	RGATCY	1 cut(s)	613
MhlI	GDGCHC	2 cut(s)	434, 564
MluCI	AATT	1 cut(s)	82
MlyI	GAGTC	2 cut(s)	118, 193
MnlI	CCTC	3 cut(s)	51, 526, 539
MroXI	GAANNNNTTC	1 cut(s)	209
MseI	TTAA	2 cut(s)	30, 276
MspA1I	CMGCKG	1 cut(s)	487
MspCI	CTTAAG	1 cut(s)	275
MspI	CCGG	5 cut(s)	74, 88, 176, 389, 422
MspR9I	CCNGG	1 cut(s)	177
Mva1269I	GAATGC	1 cut(s)	365
MvnI	CGCG	1 cut(s)	327
MwoI	GCNNNNNNNGC	3 cut(s)	59, 68, 484
NciI	CCSGG	1 cut(s)	177
NcoI	CCATGG	1 cut(s)	515
NdeI	CATATG	2 cut(s)	449, 575
NdeII	GATC	4 cut(s)	385, 555, 613, 642
NlaIII	CATG	4 cut(s)	211, 229, 519, 533
NlaIV	GGNNCC	4 cut(s)	7, 72, 527, 537
NmuCI	GTSAC	1 cut(s)	196
NspI	RCATGY	1 cut(s)	211
PciI	ACATGT	1 cut(s)	207
PciSI	GCTCTTC	1 cut(s)	439
PcsI	WCGNNNNNNNCGW	1 cut(s)	564
PctI	GAATGC	1 cut(s)	365
PdmI	GAANNNNTTC	1 cut(s)	209
PfoI	TCCNGGA	1 cut(s)	175
PkrI	GCNGC	4 cut(s)	26, 329, 489, 506
PleI	GAGTC	2 cut(s)	117, 193
PpsI	GAGTC	2 cut(s)	117, 193
PpuMI	RGGWCCY	1 cut(s)	535
PscI	ACATGT	1 cut(s)	207
Psp5II	RGGWCCY	1 cut(s)	535
PspN4I	GGNNCC	4 cut(s)	7, 72, 527, 537
PspPI	GGNCC	2 cut(s)	419, 535
PspPPI	RGGWCCY	1 cut(s)	535
PsuI	RGATCY	1 cut(s)	613
PvuII	CAGCTG	1 cut(s)	487
RsaI	GTAC	2 cut(s)	527, 626
RsaNI	GTAC	2 cut(s)	526, 625
SapI	GCTCTTC	1 cut(s)	439
SaqAI	TTAA	2 cut(s)	30, 276
SatI	GCNGC	4 cut(s)	25, 328, 488, 505
Sau3AI	GATC	4 cut(s)	385, 555, 613, 642
Sau96I	GGNCC	2 cut(s)	419, 535
SchI	GAGTC	2 cut(s)	118, 193
ScrFI	CCNGG	1 cut(s)	177
SduI	GDGCHC	2 cut(s)	434, 564
SfaNI	GCATC	3 cut(s)	105, 465, 571
SfcI	CTRYAG	1 cut(s)	127
SinI	GGWCC	2 cut(s)	419, 535
SmlI	CTYRAG	1 cut(s)	275
SmoI	CTYRAG	1 cut(s)	275
Sse9I	AATT	1 cut(s)	82
SsiI	CCGC	2 cut(s)	327, 505
SspMI	CTAG	1 cut(s)	230
StyD4I	CCNGG	1 cut(s)	175
StyI	CCWWGG	1 cut(s)	515
TaaI	ACNGT	1 cut(s)	16
TaqI	TCGA	1 cut(s)	384
TasI	AATT	1 cut(s)	82
TatI	WGTACW	1 cut(s)	624
TauI	GCSGC	2 cut(s)	330, 507
Tru1I	TTAA	2 cut(s)	30, 276
Tru9I	TTAA	2 cut(s)	30, 276
TscAI	CASTG	2 cut(s)	19, 652
TseFI	GTSAC	1 cut(s)	196
TseI	GCWGC	2 cut(s)	24, 487
Tsp45I	GTSAC	1 cut(s)	196
TspRI	CASTG	2 cut(s)	19, 652
Vha464I	CTTAAG	1 cut(s)	275
VneI	GTGCAC	1 cut(s)	560
VpaK11BI	GGWCC	2 cut(s)	419, 535
XagI	CCTNNNNNAGG	1 cut(s)	543
XapI	RAATTY	1 cut(s)	82
XceI	RCATGY	1 cut(s)	211
XmiI	GTMKAC	1 cut(s)	246
XmnI	GAANNNNTTC	1 cut(s)	209
XspI	CTAG	1 cut(s)	230

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.