AT3G45810

respiratory burst oxidase homolog protein H

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0010309
Physical Location & Seq
Reverse (-)
16832726 .. 16837792
5067 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G45810.1

Sequence Viewer

Length: 2739 bp
ATGAAAAACAACAAAAAGGTTGGGACCGAAGATTCAACGAAATGGATGCTAGAGAGCGTCGAGATAGATCCAAAAGGCGATAGTTCTGTGAAACAACCCGAAAGCACAATCAATAGCAATAATCCTGAGAGTAGTGGTGCTGGTGGTGGGATCTTGAAGAATGTGTCTAAGAATCTCGCCGTGGGATCAATAATCAGGTCCATGAGCGTAAACAAATGGAGAAAGAGCGGTAATCTCGGGTCCCCGAGCACGAGGAAGAGTGGAAACCTGGGGCCTCCACTCCCTGTGTCCCAAGTAAAAAGACCGGGGCCACAAAGAGTCGAGAGGACTACATCTAGCGCGGCTAGAGGACTACAAAGTCTCCGGTTCCTTGATCGGACCGTCACGGGAAGAGAACGAGATTCGTGGAGATCAATCGAAAACCGGTTCAATCAATTTGCTGTTGACGGGAGGCTTCCCAAGGATAAATTCGGCGTTTGCATTGGAATGGGAGATACATTGGAGTTTGCGGCAAAAGTATACGAAGCATTGGGTAGGAGAAGACAAATAAAAACAGAAAATGGGATTGACAAGGAACAACTCAAGCTTTTTTGGGAAGACATGATCAAGAAGGATCTCGACTGTCGCCTCCAAATCTTCTTCGACATGTGTGATAAGGACGGAGACGGGAAGTTAACAGAAGAGGAGGTTAAAGAAGTCATAGTCTTAAGTGCATCCGCGAACAGGCTCGTGAATCTGAAGAAGAATGCTGCGTCTTATGCTTCTTTGATCATGGAAGAGCTCGACCCCAATGAGCAGGGTTACATTGAGATGTGGCAACTCGAGGTGCTACTAACAGGAATTGTATCAAACGCCGACTCACATAAGGTCGTGAGGAAATCGCAACAGCTAACGCGAGCCATGATCCCAAAACGTTACAGAACACCGACTAGTAAATACGTTGTAGTGACCGCAGAGCTAATGTACGAGCACTGGAAGAAGATTTGGGTCGTCACATTGTGGCTCGCAGTAAACGTCGTCCTCTTCATGTGGAAATACGAAGAGTTCACCACAAGCCCTCTTTACAACATCACTGGACGCTGCCTTTGCGCCGCTAAAGGAACGGCAGAAATACTAAAACTCAACATGGCTTTGATTTTGGTCCCTGTTTTAAGAAGAACCCTAACGTTCCTCAGATCGACTTTCTTGAACCACTTGATCCCATTCGACGATAACATCAACTTCCATAAGTTGATAGCCGTGGCGATAGCAGTTATTTCCTTGCTTCACACGGCATTACACATGCTATGCAACTACCCTAGGCTAAGTTCTTGCCCCTACAATTTCTACTCCGACTATGCGGGGAATCTCTTGGGAGCCAAGCAACCGACCTATTTAGGCCTAATGCTGACCCCGGTTTCGGTCACAGGAGTTCTAATGATCATCTTCATGGGTATCTCATTCACCCTTGCTATGCATTACTTCAGAAGAAACATAGTGAAATTGCCTATACCATTTAACCGTCTTGCTGGATTTAATTCGTTTTGGTATGCTCATCATTTGCTGGTTATTGCCTACGCTCTTCTTATCATCCATGGTTACATTCTTATCATCGAGAAACCTTGGTACCAAAAGACGACGTGGATGTACGTGGCCATACCAATGGTGTTGTACGCGAGCGAGAGGCTTTTCTCACGAGTTCAAGAACACAACCATCGTGTCCACATTATCAAAGCTATTGTATATTCAGGCAATGTTCTTGCACTCTATATGACCAAACCTCAAGGGTTCAAGTACAAAAGTGGCATGTACATGTTTGTCAAGTGCCCTGATATCTCCAAATTCGAATGGCATCCATTCTCCATCACTTCTGCACCCGGAGATGAATATTTGAGCGTTCACATAAGAGCATTAGGAGATTGGACTTCTGAACTTAGGAACAGATTTGCAGAGACATGTGAGCCTCATCAAAAATCGAAACCTAGTCCAAATGATCTTATTAGGATGGAAACAAGAGCGAGAGGTGCAAATCCTCATGTTGAAGAATCCCAAGCCTTATTTCCAAGAATATTTATCAAAGGACCATATGGGGCTCCGGCACAAAGCTATCAGAAGTTTGATATCCTTTTGTTGATTGGGCTAGGGATCGGGGCAACCCCATTTATAAGTATCCTAAAAGATATGTTGAATAATCTCAAACCTGGTATTCCAAAAACCGGGCAAAAGTATGAAGGAAGTGTAGGAGGTGAGAGCTTAGGAGGATCAAGTGTATATGGAGGATCGAGTGTAAATGGAGGAGGTAGTGTAAATGGAGGAGGTAGTGTAAGTGGAGGAGGTAGAAAGTTTCCACAAAGAGCATATTTTTATTGGGTGACAAGAGAACAAGCTTCTTTCGAATGGTTCAAAGGAGTTATGGATGATATTGCAGTGTATGACAAAACCAATGTGATAGAGATGCATAACTACTTAACAAGTATGTACGAAGCAGGAGATGCGAGATCTGCTCTAATTGCTATGGTCCAGAAACTTCAACATGCCAAAAATGGTGTTGACATTGTTTCCGAGAGCCGAATACGAACCCATTTCGCAAGACCTAATTGGAGGAAGGTTTTTTCTGAATTGTCAAACAAGCACGAGACTTCTCGCATAGGTGTGTTCTACTGTGGAAGTCCAACGCTTGTTCGACCGCTAAAATCACTTTGTCAGGAGTTCAGTCTCGAGTCGTCCACCCGCTTTACTTTTCACAAAGAGAATTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0016020
KEGG Pathways
Metabolic & Signaling
ko04013 ko04624 map04013 map04624
Pfam Domains
Protein Families
EF-hand_6 FAD_binding_8 Ferric_reduct NADPH_Ox NAD_binding_6

Protein Analysis

912

Amino Acids

102.94

Weight (kDa)

9.48

Isoelectric Point (pI)

44.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NADPH_Ox PF08414 106 - 208 3.2e-32 Respiratory burst NADPH oxidase
EF-hand_7 PF13499 209 - 270 7.6e-06 EF-hand domain pair
Ferric_reduct PF01794 376 - 522 1.5e-11 Ferric reductase like transmembrane component
FAD_binding_8 PF08022 566 - 693 4.7e-31 FAD-binding domain
NAD_binding_6 PF08030 699 - 895 5.9e-46 Ferric reductase NAD binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2144
AasI GACNNNNNNGTC 1 cut(s) 357
Acc65I GGTACC 1 cut(s) 1605
AccB1I GGYRCC 1 cut(s) 1605
AccBSI CCGCTC 1 cut(s) 228
AccI GTMKAC 1 cut(s) 519
AccII CGCG 4 cut(s) 341, 719, 895, 1655
AciI CCGC 9 cut(s) 228, 341, 509, 717, 951, 1092, 1340, 2666, 2710
AclI AACGTT 2 cut(s) 913, 1166
AclWI GGATC 9 cut(s) 62, 158, 193, 621, 898, 1192, 2132, 2248, 2266
AcoI YGGCCR 1 cut(s) 1632
AcsI RAATTY 3 cut(s) 467, 1820, 2731
AcuI CTGAAG 2 cut(s) 758, 1447
AdeI CACNNNGTG 1 cut(s) 999
AfaI GTAC 7 cut(s) 965, 1607, 1628, 1652, 1775, 1790, 2459
AfiI CCNNNNNNNGG 3 cut(s) 723, 1399, 2195
AflII CTTAAG 1 cut(s) 706
AflIII ACRYGT 3 cut(s) 645, 1791, 1934
AgeI ACCGGT 1 cut(s) 423
AhlI ACTAGT 1 cut(s) 929
AjiI CACGTC 1 cut(s) 1620
AjnI CCWGG 2 cut(s) 267, 2179
AjuI GAANNNNNNNTTGG 4 cut(s) 452, 484, 2022, 2054
AluBI AGCT 8 cut(s) 586, 781, 889, 958, 1715, 2085, 2232, 2366
AluI AGCT 8 cut(s) 586, 781, 889, 958, 1715, 2085, 2232, 2366
Alw21I GWGCWC 3 cut(s) 251, 783, 972
Alw26I GTCTC 5 cut(s) 365, 657, 1925, 2609, 2699
AlwI GGATC 9 cut(s) 62, 158, 193, 621, 898, 1192, 2132, 2248, 2266
Ama87I CYCGRG 4 cut(s) 236, 244, 821, 2696
AoxI GGCC 4 cut(s) 272, 308, 1378, 1632
ApeKI GCWGC 2 cut(s) 749, 1080
ApoI RAATTY 3 cut(s) 467, 1820, 2731
ArsI GACNNNNNNTTYG 4 cut(s) 1068, 1100, 1381, 1413
AsiGI ACCGGT 1 cut(s) 423
Asp718I GGTACC 1 cut(s) 1605
AspA2I CCTAGG 1 cut(s) 1298
AspLEI GCGC 2 cut(s) 341, 1091
AspS9I GGNCC 9 cut(s) 24, 198, 240, 272, 308, 378, 1141, 2060, 2497
AsuC2I CCSGG 4 cut(s) 306, 1394, 1857, 2197
AsuHPI GGTGA 4 cut(s) 1039, 1435, 2237, 2362
AsuII TTCGAA 2 cut(s) 1824, 2373
AvaI CYCGRG 4 cut(s) 236, 244, 821, 2696
AvaII GGWCC 7 cut(s) 24, 198, 240, 378, 1141, 2060, 2497
AvrII CCTAGG 1 cut(s) 1298
BaeGI GKGCMC 1 cut(s) 1808
BaeI ACNNNNGTAYC 2 cut(s) 1589, 1622
BalI TGGCCA 1 cut(s) 1634
BanI GGYRCC 1 cut(s) 1605
BanII GRGCYC 2 cut(s) 783, 2074
BauI CACGAG 4 cut(s) 250, 728, 1674, 2612
BbsI GAAGAC 2 cut(s) 547, 603
Bbv12I GWGCWC 3 cut(s) 251, 783, 972
BbvI GCAGC 2 cut(s) 736, 1067
BccI CCATC 3 cut(s) 1701, 1850, 1978
BceAI ACGGC 4 cut(s) 164, 1119, 1223, 1287
BcgI CGANNNNNNTGC 2 cut(s) 28, 62
BciT130I CCWGG 2 cut(s) 269, 2181
BciVI GTATCC 1 cut(s) 2159
BclI TGATCA 3 cut(s) 603, 768, 1419
BcnI CCSGG 4 cut(s) 306, 1394, 1857, 2197
BcoDI GTCTC 5 cut(s) 365, 657, 1925, 2609, 2699
BcuI ACTAGT 1 cut(s) 929
BfaI CTAG 7 cut(s) 50, 336, 345, 930, 1299, 1962, 2120
BfrI CTTAAG 1 cut(s) 706
BfuI GTATCC 1 cut(s) 2159
BglII AGATCT 1 cut(s) 2477
BisI GCNGC 5 cut(s) 342, 510, 750, 1081, 1092
BlnI CCTAGG 1 cut(s) 1298
BlsI GCNGC 5 cut(s) 343, 511, 751, 1082, 1093
Bme1390I CCNGG 6 cut(s) 269, 306, 1394, 1857, 2181, 2197
Bme18I GGWCC 7 cut(s) 24, 198, 240, 378, 1141, 2060, 2497
BmeT110I CYCGRG 4 cut(s) 236, 244, 821, 2696
BmgBI CACGTC 1 cut(s) 1620
BmgT120I GGNCC 9 cut(s) 24, 198, 240, 272, 308, 378, 1141, 2060, 2497
BmrFI CCNGG 6 cut(s) 269, 306, 1394, 1857, 2181, 2197
BmsI GCATC 5 cut(s) 36, 722, 1840, 2424, 2461
BpiI GAAGAC 2 cut(s) 547, 603
BplI GAGNNNNNCTC 2 cut(s) 2467, 2499
Bpu10I CCTNAGC 1 cut(s) 2233
Bpu14I TTCGAA 2 cut(s) 1824, 2373
BpuEI CTTGAG 2 cut(s) 566, 1746
BpuMI CCSGG 4 cut(s) 306, 1394, 1857, 2197
BsaAI YACGTR 1 cut(s) 1630
BsaJI CCNNGG 9 cut(s) 180, 268, 305, 459, 1239, 1298, 1392, 1573, 1601
BsaWI WCCGGW 2 cut(s) 363, 423
BsaXI ACNNNNNCTCC 6 cut(s) 345, 375, 2268, 2286, 2298, 2316
Bsc4I CCNNNNNNNGG 3 cut(s) 723, 1399, 2195
Bse118I RCCGGY 1 cut(s) 423
Bse1I ACTGG 2 cut(s) 977, 1078
Bse3DI GCAATG 1 cut(s) 1738
BseBI CCWGG 2 cut(s) 269, 2181
BseDI CCNNGG 9 cut(s) 180, 268, 305, 459, 1239, 1298, 1392, 1573, 1601
BseGI GGATG 7 cut(s) 51, 713, 1569, 1629, 1831, 1989, 2401
BseLI CCNNNNNNNGG 3 cut(s) 723, 1399, 2195
BseMI GCAATG 1 cut(s) 1738
BseMII CTCAG 2 cut(s) 117, 1186
BseNI ACTGG 2 cut(s) 977, 1078
BseRI GAGGAG 4 cut(s) 698, 2289, 2307, 2325
BseSI GKGCMC 1 cut(s) 1808
BseXI GCAGC 2 cut(s) 736, 1067
BsgI GTGCAG 1 cut(s) 1836
Bsh1236I CGCG 4 cut(s) 341, 719, 895, 1655
Bsh1285I CGRYCG 1 cut(s) 2666
BshFI GGCC 4 cut(s) 274, 310, 1380, 1634
BshNI GGYRCC 1 cut(s) 1605
BshTI ACCGGT 1 cut(s) 423
BsiEI CGRYCG 1 cut(s) 2666
BsiHKAI GWGCWC 3 cut(s) 251, 783, 972
BsiHKCI CYCGRG 4 cut(s) 236, 244, 821, 2696
BsiSI CCGG 7 cut(s) 305, 364, 424, 1394, 1857, 2075, 2196
BslFI GGGAC 4 cut(s) 37, 226, 274, 1127
BslI CCNNNNNNNGG 3 cut(s) 723, 1399, 2195
BsmAI GTCTC 5 cut(s) 365, 657, 1925, 2609, 2699
BsmBI CGTCTC 1 cut(s) 657
BsmFI GGGAC 4 cut(s) 37, 226, 274, 1127
BsmI GAATGC 1 cut(s) 751
BsnI GGCC 4 cut(s) 274, 310, 1380, 1634
BsoBI CYCGRG 4 cut(s) 236, 244, 821, 2696
Bsp119I TTCGAA 2 cut(s) 1824, 2373
Bsp1286I GDGCHC 5 cut(s) 251, 783, 972, 1808, 2074
Bsp1407I TGTACA 1 cut(s) 1788
Bsp19I CCATGG 1 cut(s) 1573
BspACI CCGC 9 cut(s) 228, 341, 509, 717, 951, 1092, 1340, 2666, 2710
BspANI GGCC 4 cut(s) 274, 310, 1380, 1634
BspCNI CTCAG 2 cut(s) 118, 1185
BspFNI CGCG 4 cut(s) 341, 719, 895, 1655
BspPI GGATC 9 cut(s) 62, 158, 193, 621, 898, 1192, 2132, 2248, 2266
BspQI GCTCTTC 2 cut(s) 771, 1566
BspT104I TTCGAA 2 cut(s) 1824, 2373
BspT107I GGYRCC 1 cut(s) 1605
BspTI CTTAAG 1 cut(s) 706
BsrBI CCGCTC 1 cut(s) 228
BsrDI GCAATG 1 cut(s) 1738
BsrFI RCCGGY 1 cut(s) 423
BsrGI TGTACA 1 cut(s) 1788
BsrI ACTGG 2 cut(s) 977, 1078
BssAI RCCGGY 1 cut(s) 423
BssECI CCNNGG 9 cut(s) 180, 268, 305, 459, 1239, 1298, 1392, 1573, 1601
BssNAI GTATAC 1 cut(s) 520
BssSI CACGAG 4 cut(s) 250, 728, 1674, 2612
BssT1I CCWWGG 4 cut(s) 459, 1298, 1573, 1601
Bst1107I GTATAC 1 cut(s) 520
Bst2BI CACGAG 4 cut(s) 250, 728, 1674, 2612
Bst2UI CCWGG 2 cut(s) 269, 2181
Bst4CI ACNGT 4 cut(s) 382, 623, 1502, 2642
Bst6I CTCTTC 7 cut(s) 251, 385, 675, 771, 1028, 1035, 1566
BstAFI CTTAAG 1 cut(s) 706
BstAPI GCANNNNNTGC 1 cut(s) 2471
BstAUI TGTACA 1 cut(s) 1788
BstBAI YACGTR 1 cut(s) 1630
BstBI TTCGAA 2 cut(s) 1824, 2373
BstC8I GCNNGC 3 cut(s) 897, 1005, 1657
BstDEI CTNAG 6 cut(s) 126, 168, 1172, 1304, 1913, 2233
BstDSI CCRYGG 3 cut(s) 180, 1239, 1573
BstF5I GGATG 7 cut(s) 51, 713, 1569, 1629, 1831, 1989, 2401
BstFNI CGCG 4 cut(s) 341, 719, 895, 1655
BstHHI GCGC 2 cut(s) 341, 1091
BstMAI GTCTC 5 cut(s) 365, 657, 1925, 2609, 2699
BstMCI CGRYCG 1 cut(s) 2666
BstMWI GCNNNNNNNGC 6 cut(s) 758, 1086, 2003, 2471, 2480, 2489
BstNI CCWGG 2 cut(s) 269, 2181
BstNSI RCATGY 6 cut(s) 649, 1285, 1789, 1795, 1938, 2516
BstSCI CCNGG 6 cut(s) 267, 304, 1392, 1855, 2179, 2195
BstSLI GKGCMC 1 cut(s) 1808
BstUI CGCG 4 cut(s) 341, 719, 895, 1655
BstV1I GCAGC 2 cut(s) 736, 1067
BstV2I GAAGAC 2 cut(s) 547, 603
BstX2I RGATCY 4 cut(s) 67, 150, 613, 2477
BstXI CCANNNNNNTGG 1 cut(s) 1642
BstYI RGATCY 4 cut(s) 67, 150, 613, 2477
BstZ17I GTATAC 1 cut(s) 520
BsuI GTATCC 1 cut(s) 2159
BsuRI GGCC 4 cut(s) 274, 310, 1380, 1634
BtgI CCRYGG 3 cut(s) 180, 1239, 1573
BtrI CACGTC 1 cut(s) 1620
BtsCI GGATG 7 cut(s) 51, 713, 1569, 1629, 1831, 1989, 2401
BtsI GCAGTG 1 cut(s) 2412
BtsIMutI CAGTG 3 cut(s) 970, 1071, 2412
Cac8I GCNNGC 3 cut(s) 897, 1005, 1657
CfoI GCGC 2 cut(s) 341, 1091
Cfr10I RCCGGY 1 cut(s) 423
Cfr13I GGNCC 9 cut(s) 24, 198, 240, 272, 308, 378, 1141, 2060, 2497
CpoI CGGWCCG 1 cut(s) 378
CseI GACGC 3 cut(s) 46, 741, 1086
CsiI ACCWGGT 1 cut(s) 2179
Csp6I GTAC 7 cut(s) 964, 1606, 1627, 1651, 1774, 1789, 2458
CspAI ACCGGT 1 cut(s) 423
CspI CGGWCCG 1 cut(s) 378
CviQI GTAC 7 cut(s) 964, 1606, 1627, 1651, 1774, 1789, 2458
DdeI CTNAG 6 cut(s) 126, 168, 1172, 1304, 1913, 2233
DraIII CACNNNGTG 1 cut(s) 999
DrdI GACNNNNNNGTC 1 cut(s) 357
DseDI GACNNNNNNGTC 1 cut(s) 357
EaeI YGGCCR 1 cut(s) 1632
Eam1104I CTCTTC 7 cut(s) 251, 385, 675, 771, 1028, 1035, 1566
EarI CTCTTC 7 cut(s) 251, 385, 675, 771, 1028, 1035, 1566
Ecl136II GAGCTC 1 cut(s) 781
Eco130I CCWWGG 4 cut(s) 459, 1298, 1573, 1601
Eco147I AGGCCT 1 cut(s) 1380
Eco24I GRGCYC 2 cut(s) 783, 2074
Eco32I GATATC 2 cut(s) 1813, 2101
Eco47I GGWCC 7 cut(s) 24, 198, 240, 378, 1141, 2060, 2497
Eco53kI GAGCTC 1 cut(s) 781
Eco57I CTGAAG 2 cut(s) 758, 1447
Eco88I CYCGRG 4 cut(s) 236, 244, 821, 2696
EcoICRI GAGCTC 1 cut(s) 781
EcoO109I RGGNCCY 2 cut(s) 240, 272
EcoRII CCWGG 2 cut(s) 267, 2179
EcoRV GATATC 2 cut(s) 1813, 2101
EcoT14I CCWWGG 4 cut(s) 459, 1298, 1573, 1601
EcoT22I ATGCAT 2 cut(s) 1458, 2439
EcoT38I GRGCYC 2 cut(s) 783, 2074
ErhI CCWWGG 4 cut(s) 459, 1298, 1573, 1601
Esp3I CGTCTC 1 cut(s) 657
FaqI GGGAC 4 cut(s) 37, 226, 274, 1127
FauI CCCGC 2 cut(s) 1333, 2717
FauNDI CATATG 1 cut(s) 2065
FbaI TGATCA 3 cut(s) 603, 768, 1419
FblI GTMKAC 1 cut(s) 519
Fnu4HI GCNGC 5 cut(s) 342, 510, 750, 1081, 1092
FokI GGATG 7 cut(s) 58, 700, 1556, 1636, 1818, 1996, 2408
FriOI GRGCYC 2 cut(s) 783, 2074
Fsp4HI GCNGC 5 cut(s) 342, 510, 750, 1081, 1092
FspBI CTAG 7 cut(s) 50, 336, 345, 930, 1299, 1962, 2120
GlaI GCGC 2 cut(s) 340, 1090
GluI GCNGC 5 cut(s) 342, 510, 750, 1081, 1092
HaeIII GGCC 4 cut(s) 274, 310, 1380, 1634
HapII CCGG 7 cut(s) 305, 364, 424, 1394, 1857, 2075, 2196
HgaI GACGC 3 cut(s) 46, 741, 1086
HhaI GCGC 2 cut(s) 341, 1091
Hin6I GCGC 2 cut(s) 339, 1089
HinP1I GCGC 2 cut(s) 339, 1089
HincII GTYRAC 3 cut(s) 445, 675, 2530
HindII GTYRAC 3 cut(s) 445, 675, 2530
HindIII AAGCTT 2 cut(s) 584, 2364
HinfI GANTC 9 cut(s) 32, 172, 318, 401, 733, 857, 1345, 2024, 2699
HpaI GTTAAC 1 cut(s) 675
HpaII CCGG 7 cut(s) 305, 364, 424, 1394, 1857, 2075, 2196
HphI GGTGA 4 cut(s) 1039, 1435, 2237, 2362
Hpy99I CGWCG 4 cut(s) 62, 1019, 1211, 1621
HpyAV CCTTC 3 cut(s) 604, 2204, 2578
HpyCH4III ACNGT 4 cut(s) 382, 623, 1502, 2642
HpyCH4IV ACGT 6 cut(s) 913, 939, 1014, 1166, 1619, 1629
HpyF10VI GCNNNNNNNGC 6 cut(s) 758, 1086, 2003, 2471, 2480, 2489
HpyF3I CTNAG 6 cut(s) 126, 168, 1172, 1304, 1913, 2233
HpySE526I ACGT 6 cut(s) 913, 939, 1014, 1166, 1619, 1629
HspAI GCGC 2 cut(s) 339, 1089
KflI GGGWCCC 1 cut(s) 240
KpnI GGTACC 1 cut(s) 1609
Ksp22I TGATCA 3 cut(s) 603, 768, 1419
KspAI GTTAAC 1 cut(s) 675
LguI GCTCTTC 2 cut(s) 771, 1566
LmnI GCTCC 2 cut(s) 1355, 2077
Lsp1109I GCAGC 2 cut(s) 736, 1067
LweI GCATC 5 cut(s) 36, 722, 1840, 2424, 2461
MabI ACCWGGT 1 cut(s) 2179
MaeI CTAG 7 cut(s) 50, 336, 345, 930, 1299, 1962, 2120
MaeII ACGT 6 cut(s) 913, 939, 1014, 1166, 1619, 1629
MaeIII GTNAC 8 cut(s) 382, 800, 914, 946, 991, 1402, 1577, 2350
MbiI CCGCTC 1 cut(s) 228
MflI RGATCY 4 cut(s) 67, 150, 613, 2477
MhlI GDGCHC 5 cut(s) 251, 783, 972, 1808, 2074
MlsI TGGCCA 1 cut(s) 1634
MluNI TGGCCA 1 cut(s) 1634
MlyI GAGTC 3 cut(s) 327, 851, 2708
MmeI TCCRAC 2 cut(s) 1356, 2675
Mox20I TGGCCA 1 cut(s) 1634
Mph1103I ATGCAT 2 cut(s) 1458, 2439
MscI TGGCCA 1 cut(s) 1634
MseI TTAA 7 cut(s) 674, 690, 707, 1151, 1497, 1515, 2447
MslI CAYNNNNRTG 6 cut(s) 485, 809, 1427, 1640, 1790, 2630
Msp20I TGGCCA 1 cut(s) 1634
MspCI CTTAAG 1 cut(s) 706
MspI CCGG 7 cut(s) 305, 364, 424, 1394, 1857, 2075, 2196
MspR9I CCNGG 6 cut(s) 269, 306, 1394, 1857, 2181, 2197
Mva1269I GAATGC 1 cut(s) 751
MvaI CCWGG 2 cut(s) 269, 2181
MvnI CGCG 4 cut(s) 341, 719, 895, 1655
MwoI GCNNNNNNNGC 6 cut(s) 758, 1086, 2003, 2471, 2480, 2489
NciI CCSGG 4 cut(s) 306, 1394, 1857, 2197
NcoI CCATGG 1 cut(s) 1573
NdeI CATATG 1 cut(s) 2065
NmuCI GTSAC 5 cut(s) 382, 946, 991, 1402, 2350
NsiI ATGCAT 2 cut(s) 1458, 2439
NspI RCATGY 6 cut(s) 649, 1285, 1789, 1795, 1938, 2516
NspV TTCGAA 2 cut(s) 1824, 2373
PaeR7I CTCGAG 2 cut(s) 821, 2696
PceI AGGCCT 1 cut(s) 1380
PciI ACATGT 3 cut(s) 645, 1791, 1934
PciSI GCTCTTC 2 cut(s) 771, 1566
PcsI WCGNNNNNNNCGW 1 cut(s) 1011
PctI GAATGC 1 cut(s) 751
PfeI GAWTC 6 cut(s) 32, 172, 401, 733, 1345, 2024
PinAI ACCGGT 1 cut(s) 423
PkrI GCNGC 5 cut(s) 343, 511, 751, 1082, 1093
PleI GAGTC 3 cut(s) 326, 851, 2707
PpsI GAGTC 3 cut(s) 326, 851, 2707
Ppu21I YACGTR 1 cut(s) 1630
PpuMI RGGWCCY 1 cut(s) 240
PscI ACATGT 3 cut(s) 645, 1791, 1934
PsiI TTATAA 1 cut(s) 2144
Psp124BI GAGCTC 1 cut(s) 783
Psp1406I AACGTT 2 cut(s) 913, 1166
Psp5II RGGWCCY 1 cut(s) 240
Psp6I CCWGG 2 cut(s) 267, 2179
PspGI CCWGG 2 cut(s) 267, 2179
PspPI GGNCC 9 cut(s) 24, 198, 240, 272, 308, 378, 1141, 2060, 2497
PspPPI RGGWCCY 1 cut(s) 240
PspXI VCTCGAGB 1 cut(s) 821
PsuI RGATCY 4 cut(s) 67, 150, 613, 2477
RsaI GTAC 7 cut(s) 965, 1607, 1628, 1652, 1775, 1790, 2459
RsaNI GTAC 7 cut(s) 964, 1606, 1627, 1651, 1774, 1789, 2458
RseI CAYNNNNRTG 6 cut(s) 485, 809, 1427, 1640, 1790, 2630
Rsr2I CGGWCCG 1 cut(s) 378
RsrII CGGWCCG 1 cut(s) 378
SacI GAGCTC 1 cut(s) 783
SapI GCTCTTC 2 cut(s) 771, 1566
SaqAI TTAA 7 cut(s) 674, 690, 707, 1151, 1497, 1515, 2447
SatI GCNGC 5 cut(s) 342, 510, 750, 1081, 1092
Sau96I GGNCC 9 cut(s) 24, 198, 240, 272, 308, 378, 1141, 2060, 2497
SchI GAGTC 3 cut(s) 327, 851, 2708
ScrFI CCNGG 6 cut(s) 269, 306, 1394, 1857, 2181, 2197
SduI GDGCHC 5 cut(s) 251, 783, 972, 1808, 2074
SexAI ACCWGGT 1 cut(s) 2179
SfaNI GCATC 5 cut(s) 36, 722, 1840, 2424, 2461
Sfr274I CTCGAG 2 cut(s) 821, 2696
SfuI TTCGAA 2 cut(s) 1824, 2373
SinI GGWCC 7 cut(s) 24, 198, 240, 378, 1141, 2060, 2497
SlaI CTCGAG 2 cut(s) 821, 2696
SmiMI CAYNNNNRTG 6 cut(s) 485, 809, 1427, 1640, 1790, 2630
SmlI CTYRAG 5 cut(s) 581, 706, 821, 1761, 2696
SmoI CTYRAG 5 cut(s) 581, 706, 821, 1761, 2696
SpeI ACTAGT 1 cut(s) 929
SseBI AGGCCT 1 cut(s) 1380
SsiI CCGC 9 cut(s) 228, 341, 509, 717, 951, 1092, 1340, 2666, 2710
SspI AATATT 2 cut(s) 1868, 2049
SspMI CTAG 7 cut(s) 50, 336, 345, 930, 1299, 1962, 2120
SstI GAGCTC 1 cut(s) 783
StuI AGGCCT 1 cut(s) 1380
StyD4I CCNGG 6 cut(s) 267, 304, 1392, 1855, 2179, 2195
StyI CCWWGG 4 cut(s) 459, 1298, 1573, 1601
TaaI ACNGT 4 cut(s) 382, 623, 1502, 2642
TaiI ACGT 6 cut(s) 916, 942, 1017, 1169, 1622, 1632
TaqII GACCGA 2 cut(s) 41, 1390
TatI WGTACW 2 cut(s) 1773, 1788
TauI GCSGC 3 cut(s) 344, 512, 1094
TfiI GAWTC 6 cut(s) 32, 172, 401, 733, 1345, 2024
Tru1I TTAA 7 cut(s) 674, 690, 707, 1151, 1497, 1515, 2447
Tru9I TTAA 7 cut(s) 674, 690, 707, 1151, 1497, 1515, 2447
TscAI CASTG 3 cut(s) 977, 1078, 2412
TseFI GTSAC 5 cut(s) 382, 946, 991, 1402, 2350
TseI GCWGC 2 cut(s) 749, 1080
Tsp45I GTSAC 5 cut(s) 382, 946, 991, 1402, 2350
TspDTI ATGAA 5 cut(s) 17, 1015, 1417, 1878, 2223
TspGWI ACGGA 1 cut(s) 675
TspRI CASTG 3 cut(s) 977, 1078, 2412
Vha464I CTTAAG 1 cut(s) 706
VpaK11BI GGWCC 7 cut(s) 24, 198, 240, 378, 1141, 2060, 2497
XapI RAATTY 3 cut(s) 467, 1820, 2731
XceI RCATGY 6 cut(s) 649, 1285, 1789, 1795, 1938, 2516
XhoI CTCGAG 2 cut(s) 821, 2696
XmaJI CCTAGG 1 cut(s) 1298
XmiI GTMKAC 1 cut(s) 519
XspI CTAG 7 cut(s) 50, 336, 345, 930, 1299, 1962, 2120
Zsp2I ATGCAT 2 cut(s) 1458, 2439
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.