Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0010309

Physical Location & Seq

Genomic Coordinates Reverse (-)

68005773 .. 68010523

Gene Structure 4751 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG420200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2112 bp

ATGCTTGAAGTACAAACTAGAATGAGCGAGGCTGATGATTTTGTTAGGTGTGACAAGAACGGTGACGGGAAGCTGTCGGAGGAGGAGGTGACGGAGGTTATAGTTTTGAGTGCCTCCACGAACAAGTTGGCAAATCTTAAACAGCAGGCAGCATCATATGCAGCTTTGATCATGGAAGAGCTTGATCCTGACCACCTCGGATATATAGAGATGTGGCAGTTAGAAACTCTACTTAGGGAAATGGCAATGGCTGAGACTGAAGTAAAACCAAAACTTTGCAAGAAAACCCAGACTCTCGCAAGAGCCATGATTCCCAGAAGATACAGGAATCCTATGAGCAAATTCGTATCTACTACCACAGAACATGTCCATGAAAACTGGAGGAAAATATGGGTTGTTTCGTTGTGGTTAGCAGTAAACGTGGGCCTCTTTGCTTGGAAATACCGCCAGTACCAGAAAAATCCGTTATTCAAAATCATGGGTCGATGCCTCTGCTTTGCAAAGGGTGCTGCTGAGACCCTCAAGTTCAACATGGCTCTCATTCTCATTCCAGTTTGTAGGGGAACTCTTACAGTCCTTAGATCAACATTTTTAAGTAACTTGATCCCTTTTGATGACAATATCAATTTCCATAAGTTGATTGCATTGGGGATAACAATCGGGACTGGTATACATGGAATCGTGCATCTAACTTGCGATTTTCCAAGATTGATTTCATGTCCAAGGGGTCAGTTCTTGGACATTGCCGGGCGTTATTTCAATTCTGTGCAGCCAAGTTACATGGATCTGGTTACAACTACTCCAGGCATAACTGGGATTATCATAATTGTTATAATGGCATTTTCCTTCACTCTCGCACTAAACTCACTCAGGAAAAGTGCCATCAACTTACCGGGGCCTCTCAAGAATTGGATAGGGTTTAATTCCTTCTGGTATTCACACCAAATGCTGGGATTGGCATATATGCTCTTCATCATACACGGTTTTTTCTTAATATTTCAGGATCAATGGTACAAGAAGACGACATGGATGTATGTATCAGTTCCAGTATTATTGTATGCAACTGAACGTTTGGTCACACTTCTTCAAGAATATTCACATCCTGTCTCTGTCATTAAGGCGATAACTTATACAGGAAATGTTCTCGCACTGTACTTGAGCAAACCTCCAGGATTCAAGTACGAAAGTGGAATGTACATGTTTCTCAAGTGTCCTGATCTATCAAATTTCGAATGGCATCCTTTCACCATCACTTCTGCCCCGGGAGATGATTACTTGAGTGTCCACATCCGAGCTCTGGGAGACTGGACTACAGAGCTCAGAAACATCTTCTCTGAGGTCAGCAGTCAGCTTCAATGTACTCAGACTACTAGAAAAGGAACCCTTATTAGAACAGAAACTAGAGTGAAATCAAAAAAGCACGAAGTTGAACGAAACTATGATCATGAACAACCAGTATATCCGAAGATTGTAGTAAAGGGACCCTTTGGAGCCCCTGCTCAGAATTACACCAAGTATGACATCTTATTGCTCATAGGTCTTGGAATTGGAGCAACTCCTTTCATCAGCATCGCAAAAGATATCATAAACCGTATAAGCTATAGATATGGTCAAAGGCCTGAGTCAGCACATGGCAGTGAAGAAAGAAGCTTAGAAACTGTGCTAAGCACCCACCAACTTGAAACGAATACAAGGACTCCAGAAAGGGCCTACTTTTATTGGTTAACAAGGGAACAAGGTTCCTTTGAATGGTTTAAAGGCGTCATGGATGATATTGCAGAGTATGACAACCATCAAGTGATAGAAATGCACACCTACTTGACAAGCGTCTACGAAGAAGGAGATGCACGGTCTGCGCTTATTACCATGGTACAGAAACTGCAACATGCAAAGAATGGGGTCGATGTTGTCTCAGAAAGTCGGATAAGGACACATTTTTCAAGACCTAATTGGAGAAAGGTGTTTTCGGACTTGGCTGCAGCTCATCAATCGTCTCGAATAGGCGTCTTCTACTGTGGAAGTCCAACACTGATTAAAACGCTAAAGGAGCTCTGCCTAGAATTTAGCTTAAATTCATCAACCCGATTCCAGTTCCACAAGGAGAATTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04013 ko04624 map04013 map04624

Pfam Domains

Protein Families

EF-hand_6 FAD_binding_8 Ferric_reduct NADPH_Ox NAD_binding_6

Protein Analysis

703

Amino Acids

80.59

Weight (kDa)

8.78

Isoelectric Point (pI)

35.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ferric_reduct	PF01794	180 - 324	4.8e-10	Ferric reductase like transmembrane component
FAD_binding_8	PF08022	369 - 500	7.2e-28	FAD-binding domain
NAD_binding_6	PF08030	506 - 685	6.9e-48	Ferric reductase NAD binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010309)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G45810 AT5G60010
fragaria_vesca	FvH4_3g34420
malus_domestica	MD03G1106300.v1.1 MD11G1118400.v1.1
prunus_persica	Prupe.6G088800_v2.0.a1 Prupe.6G088800_v2.0.a1
pyrus_communis	pycom03g08540 pycom11g09950
rosa_chinensis	RchiOBHm_Chr5g0062021
rosa_laevigata	RLG00000035526
rosa_multiflora	Rmu_sc0002296.1_g000006 Rmu_sc0017669.1_g000002
rosa_roxburghii	Rroxscaffold_1G00018690
rosa_rugosa	Rorug05G0345500 Rorug05G0345600
rosa_samantha	Rh5AG406800 Rh5BG420200 Rh5CG444300 Rh5DG435600
rosa_wichuraiana	Rw5G038340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	833
AccB7I	CCANNNNNTGG	1 cut(s)	949
AccI	GTMKAC	2 cut(s)	670, 1830
AciI	CCGC	1 cut(s)	445
AclI	AACGTT	1 cut(s)	1069
AclWI	GGATC	4 cut(s)	179, 598, 792, 1011
AcsI	RAATTY	5 cut(s)	341, 1225, 2060, 2071, 2104
AcuI	CTGAAG	1 cut(s)	279
AcyI	GRCGYC	2 cut(s)	1761, 2004
AfaI	GTAC	8 cut(s)	12, 452, 1013, 1154, 1181, 1196, 1360, 1872
AfiI	CCNNNNNNNGG	3 cut(s)	949, 1297, 1749
AflIII	ACRYGT	2 cut(s)	364, 1197
AjnI	CCWGG	2 cut(s)	802, 1168
AjuI	GAANNNNNNNTTGG	2 cut(s)	697, 729
Alw21I	GWGCWC	3 cut(s)	1297, 1320, 2052
Alw26I	GTCTC	6 cut(s)	248, 509, 1111, 1296, 1915, 1998
AlwI	GGATC	4 cut(s)	179, 598, 792, 1011
AlwNI	CAGNNNCTG	1 cut(s)	1879
Ama87I	CYCGRG	1 cut(s)	1261
AoxI	GGCC	4 cut(s)	424, 896, 1616, 1707
ApeKI	GCWGC	6 cut(s)	149, 161, 509, 769, 1976, 1979
ApoI	RAATTY	5 cut(s)	341, 1225, 2060, 2071, 2104
AspLEI	GCGC	1 cut(s)	1858
AspS9I	GGNCC	4 cut(s)	424, 896, 1481, 1707
AsuC2I	CCSGG	4 cut(s)	748, 894, 1262, 1263
AsuHPI	GGTGA	3 cut(s)	74, 100, 1237
AsuII	TTCGAA	1 cut(s)	1230
AvaI	CYCGRG	1 cut(s)	1261
AvaII	GGWCC	1 cut(s)	1481
BanII	GRGCYC	4 cut(s)	1297, 1320, 1495, 2052
BbsI	GAAGAC	2 cut(s)	1025, 1999
Bbv12I	GWGCWC	3 cut(s)	1297, 1320, 2052
BbvI	GCAGC	6 cut(s)	161, 173, 496, 781, 1963, 1991
BccI	CCATC	3 cut(s)	890, 1256, 1800
BcgI	CGANNNNNNTGC	2 cut(s)	474, 508
BciT130I	CCWGG	2 cut(s)	804, 1170
BclI	TGATCA	2 cut(s)	168, 1441
BcnI	CCSGG	4 cut(s)	748, 894, 1262, 1263
BcoDI	GTCTC	6 cut(s)	248, 509, 1111, 1296, 1915, 1998
BfaI	CTAG	5 cut(s)	18, 1371, 1401, 2057, 2110
BfmI	CTRYAG	3 cut(s)	1311, 1600, 1977
BisI	GCNGC	6 cut(s)	150, 162, 510, 770, 1977, 1980
BlpI	GCTNAGC	1 cut(s)	1664
BlsI	GCNGC	6 cut(s)	151, 163, 511, 771, 1978, 1981
Bme1390I	CCNGG	6 cut(s)	748, 804, 894, 1170, 1262, 1263
Bme18I	GGWCC	1 cut(s)	1481
BmeT110I	CYCGRG	1 cut(s)	1261
BmgT120I	GGNCC	4 cut(s)	424, 896, 1481, 1707
BmiI	GGNNCC	6 cut(s)	897, 1381, 1482, 1483, 1492, 1741
BmrFI	CCNGG	6 cut(s)	748, 804, 894, 1170, 1262, 1263
BmrI	ACTGGG	1 cut(s)	822
BmsI	GCATC	6 cut(s)	161, 476, 694, 1246, 1578, 1834
BmuI	ACTGGG	1 cut(s)	822
BoxI	GACNNNNGTC	1 cut(s)	1826
BpiI	GAAGAC	2 cut(s)	1025, 1999
BplI	GAGNNNNNCTC	2 cut(s)	1150, 1182
BpmI	CTGGAG	4 cut(s)	400, 786, 1152, 1683
Bpu1102I	GCTNAGC	1 cut(s)	1664
Bpu14I	TTCGAA	1 cut(s)	1230
BpuEI	CTTGAG	5 cut(s)	506, 887, 1177, 1190, 1297
BpuMI	CCSGG	4 cut(s)	748, 894, 1262, 1263
BsaBI	GATNNNNATC	1 cut(s)	656
BsaHI	GRCGYC	2 cut(s)	1761, 2004
BsaI	GGTCTC	1 cut(s)	509
BsaJI	CCNNGG	6 cut(s)	196, 722, 893, 1260, 1261, 1866
BsaXI	ACNNNNNCTCC	4 cut(s)	784, 814, 1681, 1711
Bsc4I	CCNNNNNNNGG	3 cut(s)	949, 1297, 1749
Bse1I	ACTGG	9 cut(s)	383, 448, 551, 670, 817, 1046, 1310, 1454, 2089
Bse3DI	GCAATG	2 cut(s)	252, 741
Bse8I	GATNNNNATC	1 cut(s)	656
BseBI	CCWGG	2 cut(s)	804, 1170
BseDI	CCNNGG	6 cut(s)	196, 722, 893, 1260, 1261, 1866
BseGI	GGATG	5 cut(s)	1035, 1099, 1237, 1287, 1774
BseJI	GATNNNNATC	1 cut(s)	656
BseLI	CCNNNNNNNGG	3 cut(s)	949, 1297, 1749
BseMI	GCAATG	2 cut(s)	252, 741
BseMII	CTCAG	9 cut(s)	243, 504, 883, 1326, 1333, 1376, 1514, 1611, 1926
BseNI	ACTGG	9 cut(s)	383, 448, 551, 670, 817, 1046, 1310, 1454, 2089
BseRI	GAGGAG	2 cut(s)	95, 98
BseXI	GCAGC	6 cut(s)	161, 173, 496, 781, 1963, 1991
BseYI	CCCAGC	1 cut(s)	949
BsgI	GTGCAG	1 cut(s)	788
BshFI	GGCC	4 cut(s)	426, 898, 1618, 1709
BsiHKAI	GWGCWC	3 cut(s)	1297, 1320, 2052
BsiHKCI	CYCGRG	1 cut(s)	1261
BsiSI	CCGG	3 cut(s)	747, 893, 1262
BslFI	GGGAC	2 cut(s)	676, 1494
BslI	CCNNNNNNNGG	3 cut(s)	949, 1297, 1749
BsmAI	GTCTC	6 cut(s)	248, 509, 1111, 1296, 1915, 1998
BsmBI	CGTCTC	1 cut(s)	1998
BsmFI	GGGAC	2 cut(s)	676, 1494
BsnI	GGCC	4 cut(s)	426, 898, 1618, 1709
Bso31I	GGTCTC	1 cut(s)	509
BsoBI	CYCGRG	1 cut(s)	1261
Bsp119I	TTCGAA	1 cut(s)	1230
Bsp1286I	GDGCHC	4 cut(s)	1297, 1320, 1495, 2052
Bsp1407I	TGTACA	1 cut(s)	1194
Bsp143I	GATC	8 cut(s)	168, 184, 581, 603, 784, 1003, 1216, 1441
Bsp1720I	GCTNAGC	1 cut(s)	1664
Bsp19I	CCATGG	1 cut(s)	1866
BspACI	CCGC	1 cut(s)	445
BspANI	GGCC	4 cut(s)	426, 898, 1618, 1709
BspCNI	CTCAG	9 cut(s)	244, 505, 882, 1327, 1332, 1375, 1513, 1612, 1925
BspHI	TCATGA	1 cut(s)	1444
BspLI	GGNNCC	6 cut(s)	897, 1381, 1482, 1483, 1492, 1741
BspMAI	CTGCAG	1 cut(s)	1981
BspPI	GGATC	4 cut(s)	179, 598, 792, 1011
BspQI	GCTCTTC	2 cut(s)	171, 974
BspT104I	TTCGAA	1 cut(s)	1230
BspTNI	GGTCTC	1 cut(s)	509
BsrDI	GCAATG	2 cut(s)	252, 741
BsrGI	TGTACA	1 cut(s)	1194
BsrI	ACTGG	9 cut(s)	383, 448, 551, 670, 817, 1046, 1310, 1454, 2089
BssECI	CCNNGG	6 cut(s)	196, 722, 893, 1260, 1261, 1866
BssMI	GATC	8 cut(s)	168, 184, 581, 603, 784, 1003, 1216, 1441
BssNAI	GTATAC	1 cut(s)	671
BssNI	GRCGYC	2 cut(s)	1761, 2004
BssT1I	CCWWGG	2 cut(s)	722, 1866
Bst1107I	GTATAC	1 cut(s)	671
Bst2UI	CCWGG	2 cut(s)	804, 1170
Bst4CI	ACNGT	8 cut(s)	62, 574, 983, 1152, 1592, 1660, 1851, 2015
Bst6I	CTCTTC	2 cut(s)	171, 974
BstACI	GRCGYC	2 cut(s)	1761, 2004
BstAPI	GCANNNNNTGC	3 cut(s)	158, 506, 1853
BstAUI	TGTACA	1 cut(s)	1194
BstBI	TTCGAA	1 cut(s)	1230
BstC8I	GCNNGC	1 cut(s)	147
BstDSI	CCRYGG	1 cut(s)	1866
BstF5I	GGATG	5 cut(s)	1035, 1099, 1237, 1287, 1774
BstHHI	GCGC	1 cut(s)	1858
BstKTI	GATC	8 cut(s)	171, 187, 584, 606, 787, 1006, 1219, 1444
BstMAI	GTCTC	6 cut(s)	248, 509, 1111, 1296, 1915, 1998
BstMBI	GATC	8 cut(s)	168, 184, 581, 603, 784, 1003, 1216, 1441
BstMWI	GCNNNNNNNGC	4 cut(s)	158, 506, 1853, 2047
BstNI	CCWGG	2 cut(s)	804, 1170
BstNSI	RCATGY	3 cut(s)	368, 1201, 1889
BstPAI	GACNNNNGTC	1 cut(s)	1826
BstSCI	CCNGG	6 cut(s)	746, 802, 892, 1168, 1260, 1261
BstSFI	CTRYAG	3 cut(s)	1311, 1600, 1977
BstV1I	GCAGC	6 cut(s)	161, 173, 496, 781, 1963, 1991
BstV2I	GAAGAC	2 cut(s)	1025, 1999
BstX2I	RGATCY	1 cut(s)	784
BstYI	RGATCY	1 cut(s)	784
BstZ17I	GTATAC	1 cut(s)	671
BsuRI	GGCC	4 cut(s)	426, 898, 1618, 1709
BtgI	CCRYGG	1 cut(s)	1866
BtgZI	GCGATG	1 cut(s)	1555
BtsCI	GGATG	5 cut(s)	1035, 1099, 1237, 1287, 1774
BtsI	GCAGTG	1 cut(s)	1642
BtsIMutI	CAGTG	3 cut(s)	1148, 1642, 2027
Cac8I	GCNNGC	1 cut(s)	147
CaiI	CAGNNNCTG	1 cut(s)	1879
CciI	TCATGA	1 cut(s)	1444
CfoI	GCGC	1 cut(s)	1858
Cfr13I	GGNCC	4 cut(s)	424, 896, 1481, 1707
Cfr9I	CCCGGG	1 cut(s)	1261
CseI	GACGC	3 cut(s)	1750, 1816, 1993
Csp6I	GTAC	8 cut(s)	11, 451, 1012, 1153, 1180, 1195, 1359, 1871
CviQI	GTAC	8 cut(s)	11, 451, 1012, 1153, 1180, 1195, 1359, 1871
DpnI	GATC	8 cut(s)	170, 186, 583, 605, 786, 1005, 1218, 1443
DpnII	GATC	8 cut(s)	168, 184, 581, 603, 784, 1003, 1216, 1441
DraI	TTTAAA	1 cut(s)	1756
Eam1104I	CTCTTC	2 cut(s)	171, 974
EarI	CTCTTC	2 cut(s)	171, 974
Ecl136II	GAGCTC	3 cut(s)	1295, 1318, 2050
Eco130I	CCWWGG	2 cut(s)	722, 1866
Eco147I	AGGCCT	1 cut(s)	1618
Eco24I	GRGCYC	4 cut(s)	1297, 1320, 1495, 2052
Eco31I	GGTCTC	1 cut(s)	509
Eco32I	GATATC	1 cut(s)	1582
Eco47I	GGWCC	1 cut(s)	1481
Eco53kI	GAGCTC	3 cut(s)	1295, 1318, 2050
Eco57I	CTGAAG	1 cut(s)	279
Eco88I	CYCGRG	1 cut(s)	1261
EcoICRI	GAGCTC	3 cut(s)	1295, 1318, 2050
EcoO109I	RGGNCCY	3 cut(s)	896, 1481, 1707
EcoRII	CCWGG	2 cut(s)	802, 1168
EcoRV	GATATC	1 cut(s)	1582
EcoT14I	CCWWGG	2 cut(s)	722, 1866
EcoT38I	GRGCYC	4 cut(s)	1297, 1320, 1495, 2052
ErhI	CCWWGG	2 cut(s)	722, 1866
Esp3I	CGTCTC	1 cut(s)	1998
FalI	AAGNNNNNCTT	4 cut(s)	1368, 1400, 1469, 1501
FaqI	GGGAC	2 cut(s)	676, 1494
FauNDI	CATATG	1 cut(s)	157
FbaI	TGATCA	2 cut(s)	168, 1441
FblI	GTMKAC	2 cut(s)	670, 1830
Fnu4HI	GCNGC	6 cut(s)	150, 162, 510, 770, 1977, 1980
FokI	GGATG	5 cut(s)	1042, 1086, 1224, 1274, 1781
FriOI	GRGCYC	4 cut(s)	1297, 1320, 1495, 2052
Fsp4HI	GCNGC	6 cut(s)	150, 162, 510, 770, 1977, 1980
FspBI	CTAG	5 cut(s)	18, 1371, 1401, 2057, 2110
GlaI	GCGC	1 cut(s)	1857
GluI	GCNGC	6 cut(s)	150, 162, 510, 770, 1977, 1980
GsaI	CCCAGC	1 cut(s)	953
GsuI	CTGGAG	4 cut(s)	400, 786, 1152, 1683
HaeIII	GGCC	4 cut(s)	426, 898, 1618, 1709
HapII	CCGG	3 cut(s)	747, 893, 1262
HgaI	GACGC	3 cut(s)	1750, 1816, 1993
HhaI	GCGC	1 cut(s)	1858
Hin1I	GRCGYC	2 cut(s)	1761, 2004
Hin6I	GCGC	1 cut(s)	1856
HinP1I	GCGC	1 cut(s)	1856
HincII	GTYRAC	1 cut(s)	1725
HindII	GTYRAC	1 cut(s)	1725
HindIII	AAGCTT	1 cut(s)	1648
HinfI	GANTC	8 cut(s)	292, 310, 328, 678, 1173, 1622, 1696, 2085
HpaI	GTTAAC	1 cut(s)	1725
HpaII	CCGG	3 cut(s)	747, 893, 1262
HphI	GGTGA	3 cut(s)	74, 100, 1237
Hpy166II	GTNNAC	5 cut(s)	418, 671, 1285, 1725, 1831
Hpy8I	GTNNAC	5 cut(s)	418, 671, 1285, 1725, 1831
HpyAV	CCTTC	3 cut(s)	856, 937, 1832
HpyCH4III	ACNGT	8 cut(s)	62, 574, 983, 1152, 1592, 1660, 1851, 2015
HpyCH4IV	ACGT	2 cut(s)	420, 1069
HpyF10VI	GCNNNNNNNGC	4 cut(s)	158, 506, 1853, 2047
HpySE526I	ACGT	2 cut(s)	420, 1069
Hsp92I	GRCGYC	2 cut(s)	1761, 2004
HspAI	GCGC	1 cut(s)	1856
KflI	GGGWCCC	1 cut(s)	1481
Ksp22I	TGATCA	2 cut(s)	168, 1441
KspAI	GTTAAC	1 cut(s)	1725
Kzo9I	GATC	8 cut(s)	168, 184, 581, 603, 784, 1003, 1216, 1441
LguI	GCTCTTC	2 cut(s)	171, 974
LmnI	GCTCC	3 cut(s)	1490, 1550, 2047
Lsp1109I	GCAGC	6 cut(s)	161, 173, 496, 781, 1963, 1991
LweI	GCATC	6 cut(s)	161, 476, 694, 1246, 1578, 1834
MaeI	CTAG	5 cut(s)	18, 1371, 1401, 2057, 2110
MaeII	ACGT	2 cut(s)	420, 1069
MaeIII	GTNAC	7 cut(s)	50, 62, 88, 596, 776, 790, 1075
MalI	GATC	8 cut(s)	170, 186, 583, 605, 786, 1005, 1218, 1443
MboI	GATC	8 cut(s)	168, 184, 581, 603, 784, 1003, 1216, 1441
MflI	RGATCY	1 cut(s)	784
MhlI	GDGCHC	4 cut(s)	1297, 1320, 1495, 2052
MlyI	GAGTC	3 cut(s)	286, 1631, 1690
MmeI	TCCRAC	3 cut(s)	57, 1901, 2048
MseI	TTAA	9 cut(s)	138, 593, 921, 992, 1116, 1724, 1755, 2034, 2069
MslI	CAYNNNNRTG	2 cut(s)	369, 1635
MspI	CCGG	3 cut(s)	747, 893, 1262
MspR9I	CCNGG	6 cut(s)	748, 804, 894, 1170, 1262, 1263
MvaI	CCWGG	2 cut(s)	804, 1170
MwoI	GCNNNNNNNGC	4 cut(s)	158, 506, 1853, 2047
NciI	CCSGG	4 cut(s)	748, 894, 1262, 1263
NcoI	CCATGG	1 cut(s)	1866
NdeI	CATATG	1 cut(s)	157
NdeII	GATC	8 cut(s)	168, 184, 581, 603, 784, 1003, 1216, 1441
NlaIV	GGNNCC	6 cut(s)	897, 1381, 1482, 1483, 1492, 1741
NmuCI	GTSAC	4 cut(s)	50, 62, 88, 1075
NspI	RCATGY	3 cut(s)	368, 1201, 1889
NspV	TTCGAA	1 cut(s)	1230
PagI	TCATGA	1 cut(s)	1444
PceI	AGGCCT	1 cut(s)	1618
PciI	ACATGT	2 cut(s)	364, 1197
PciSI	GCTCTTC	2 cut(s)	171, 974
PfeI	GAWTC	5 cut(s)	310, 328, 678, 1173, 2085
PflMI	CCANNNNNTGG	1 cut(s)	949
PfoI	TCCNGGA	1 cut(s)	1168
PkrI	GCNGC	6 cut(s)	151, 163, 511, 771, 1978, 1981
PleI	GAGTC	3 cut(s)	286, 1630, 1690
PpsI	GAGTC	3 cut(s)	286, 1630, 1690
PpuMI	RGGWCCY	1 cut(s)	1481
PscI	ACATGT	2 cut(s)	364, 1197
PshAI	GACNNNNGTC	1 cut(s)	1826
PsiI	TTATAA	1 cut(s)	833
Psp124BI	GAGCTC	3 cut(s)	1297, 1320, 2052
Psp1406I	AACGTT	1 cut(s)	1069
Psp5II	RGGWCCY	1 cut(s)	1481
Psp6I	CCWGG	2 cut(s)	802, 1168
PspFI	CCCAGC	1 cut(s)	949
PspGI	CCWGG	2 cut(s)	802, 1168
PspN4I	GGNNCC	6 cut(s)	897, 1381, 1482, 1483, 1492, 1741
PspPI	GGNCC	4 cut(s)	424, 896, 1481, 1707
PspPPI	RGGWCCY	1 cut(s)	1481
PstI	CTGCAG	1 cut(s)	1981
PstNI	CAGNNNCTG	1 cut(s)	1879
PsuI	RGATCY	1 cut(s)	784
RsaI	GTAC	8 cut(s)	12, 452, 1013, 1154, 1181, 1196, 1360, 1872
RsaNI	GTAC	8 cut(s)	11, 451, 1012, 1153, 1180, 1195, 1359, 1871
RseI	CAYNNNNRTG	2 cut(s)	369, 1635
SacI	GAGCTC	3 cut(s)	1297, 1320, 2052
SapI	GCTCTTC	2 cut(s)	171, 974
SaqAI	TTAA	9 cut(s)	138, 593, 921, 992, 1116, 1724, 1755, 2034, 2069
SatI	GCNGC	6 cut(s)	150, 162, 510, 770, 1977, 1980
Sau3AI	GATC	8 cut(s)	168, 184, 581, 603, 784, 1003, 1216, 1441
Sau96I	GGNCC	4 cut(s)	424, 896, 1481, 1707
SchI	GAGTC	3 cut(s)	286, 1631, 1690
ScrFI	CCNGG	6 cut(s)	748, 804, 894, 1170, 1262, 1263
SduI	GDGCHC	4 cut(s)	1297, 1320, 1495, 2052
SfaNI	GCATC	6 cut(s)	161, 476, 694, 1246, 1578, 1834
SfcI	CTRYAG	3 cut(s)	1311, 1600, 1977
SfuI	TTCGAA	1 cut(s)	1230
SinI	GGWCC	1 cut(s)	1481
SmaI	CCCGGG	1 cut(s)	1263
SmiMI	CAYNNNNRTG	2 cut(s)	369, 1635
SmlI	CTYRAG	5 cut(s)	521, 902, 1156, 1205, 1276
SmoI	CTYRAG	5 cut(s)	521, 902, 1156, 1205, 1276
SseBI	AGGCCT	1 cut(s)	1618
SsiI	CCGC	1 cut(s)	445
SspI	AATATT	2 cut(s)	996, 1094
SspMI	CTAG	5 cut(s)	18, 1371, 1401, 2057, 2110
SstI	GAGCTC	3 cut(s)	1297, 1320, 2052
StuI	AGGCCT	1 cut(s)	1618
StyD4I	CCNGG	6 cut(s)	746, 802, 892, 1168, 1260, 1261
StyI	CCWWGG	2 cut(s)	722, 1866
TaaI	ACNGT	8 cut(s)	62, 574, 983, 1152, 1592, 1660, 1851, 2015
TaiI	ACGT	2 cut(s)	423, 1072
TaqI	TCGA	4 cut(s)	484, 1230, 1902, 1996
TatI	WGTACW	4 cut(s)	10, 1152, 1194, 1358
TfiI	GAWTC	5 cut(s)	310, 328, 678, 1173, 2085
Tru1I	TTAA	9 cut(s)	138, 593, 921, 992, 1116, 1724, 1755, 2034, 2069
Tru9I	TTAA	9 cut(s)	138, 593, 921, 992, 1116, 1724, 1755, 2034, 2069
TscAI	CASTG	3 cut(s)	1155, 1642, 2034
TseFI	GTSAC	4 cut(s)	50, 62, 88, 1075
TseI	GCWGC	6 cut(s)	149, 161, 509, 769, 1976, 1979
Tsp45I	GTSAC	4 cut(s)	50, 62, 88, 1075
TspDTI	ATGAA	6 cut(s)	387, 705, 961, 1461, 1552, 2064
TspGWI	ACGGA	2 cut(s)	107, 453
TspMI	CCCGGG	1 cut(s)	1261
TspRI	CASTG	3 cut(s)	1155, 1642, 2034
Van91I	CCANNNNNTGG	1 cut(s)	949
VpaK11BI	GGWCC	1 cut(s)	1481
XapI	RAATTY	5 cut(s)	341, 1225, 2060, 2071, 2104
XceI	RCATGY	3 cut(s)	368, 1201, 1889
XcmI	CCANNNNNNNNNTGG	1 cut(s)	124
XmaI	CCCGGG	1 cut(s)	1261
XmiI	GTMKAC	2 cut(s)	670, 1830
XspI	CTAG	5 cut(s)	18, 1371, 1401, 2057, 2110

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.