Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002296.1

Orthogroup ID

OG0010309

Physical Location & Seq

Genomic Coordinates Reverse (-)

35097 .. 39590

Gene Structure 4494 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002296.1_g000006.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2220 bp

atgaacatctcagaaaatgaaggtaaggaggacccatcaaaatgggggcttcaaaacatcgaaattgatcccatggttgaggtgcctttaaatcattccaatgacactgcattgaaaaggaccaatagcagtgtcaggaggagaaatgcgtttcagggaaatgttcgtggtggaatgggaaggattaggagcctacattttcttaatatcaaagggaaggaatcagatgcttggaagcctatggagaagcgctttaatcaatatgcagttgataataggctcagtagggacaactttgggacctgcattggccaactgtttgatgcattatgtaggaggaggaggataaatgtaaacgatgggattacttgtgaagaattgaggttgttttgggaagacttgactaatgaagactccgaagcccggcttcagatattctttgacataatgagcgaggctgatgattttgttaggtgtgacaagaacggtgacgggaagctgtcggaggaggaggtgacggagatgtggcagttagaaactctacttagggaaatggcaatggctgagactgaagtaaaaccaaaactttgcaagaaaacccagactctcgcaagagccatgattcccagaagatacaggaatcctatgagcaaattcgtatctactaccacagaacatgtccatgaaaactggaggaaaatatgggttgtttcgttgtggttagcagtaaacgtgggcctctttgcttggaaataccgccagtaccagaaaaatccgttattcaaaatcatgggtcgatgcctctgctttgcaaagggtgctgctgagaccctcaagttcaacatggctctcattctcattccagtttgtaggggaactcttacagtccttagatcaacatttttaagtaacttgatcccttttgatgacaatatcaatttccataagttgattgcattggggataacaatcgggactggtatacatggaatcgtgcatctaacttgcgattttccaagattgatttcatgtccaaggggtcagttcttggacattgccgggcgttatttcaattctgtgcagccaagttacatggatctggttacaactactccaggcataactgggattatcataattgttataatggcattttccttcactctcgcactaaactcactcaggaaaagtgccatcaacttaccggggcctctcaagaattggatagggtttaattccttctggtattcacaccaaatgctgggattggcatatatgctcttcatcatacacggttttttcttaatatttcaggatcaatggtacaagaagacggcgataacttatacaggaaatgttctcgcactgtacttgagcaaacctccaggattcaagtacgaaagtggaatgtacatgtttctcaagtgtcctgatctatcaaatttcgaatggcatcctttcaccatcacttctgccccgggagatgattacttgagtgtccacatccgagctctgggagactggactacagagctcagaaacatcttctctgaggtagtacaattatatccgaagattgtagtaaagggaccctttggagcccctgctcagaattacaccaagtatgacatcttattgctcataggtcttggaattggagcaactcctttcatcagcatcgcaaaagatatcataaaccgtataagctatagatatggtcaaaggcctgagtcagcacatggcagtgaagaaagaagcttagaaactgtgctaagcacccaccaacttgaaacgaatacaaggactccagaaagggcctacttttattggttaacaagggaacaaggttcctttgaatggtttaaaggcgtcatggatgatattgcagagtatgacaaccatcaagtgatagaaatgcacacctacttgacaagcgtctacgaagaaggagatgcacggtctgcgcttattaccatggtacagaaactgcaacatgcaaagaatggggtcgatgttgtctcagaaagtcggataaggacacatttttcaagacctaattggagaaaggtgttttcggacttggctgcagctcatcaatcgtctcgaataggcgtcttctactgtggaagtccaacactgattaaaacactaaaggagctctgcctagaatttagcttaaattcatcaacccgattccagttccacaaggagaatttctag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04013 ko04624 map04013 map04624

Pfam Domains

Protein Families

EF-hand_6 FAD_binding_8 Ferric_reduct NADPH_Ox NAD_binding_6

Protein Analysis

739

Amino Acids

84.97

Weight (kDa)

8.75

Isoelectric Point (pI)

38.47

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010309)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G45810 AT5G60010
fragaria_vesca	FvH4_3g34420
malus_domestica	MD03G1106300.v1.1 MD11G1118400.v1.1
prunus_persica	Prupe.6G088800_v2.0.a1 Prupe.6G088800_v2.0.a1
pyrus_communis	pycom03g08540 pycom11g09950
rosa_chinensis	RchiOBHm_Chr5g0062021
rosa_laevigata	RLG00000035526
rosa_multiflora	Rmu_sc0002296.1_g000006 Rmu_sc0017669.1_g000002
rosa_roxburghii	Rroxscaffold_1G00018690
rosa_rugosa	Rorug05G0345500 Rorug05G0345600
rosa_samantha	Rh5AG406800 Rh5BG420200 Rh5CG444300 Rh5DG435600
rosa_wichuraiana	Rw5G038340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1145
Acc36I	ACCTGC	1 cut(s)	311
AccB1I	GGYRCC	1 cut(s)	82
AccB7I	CCANNNNNTGG	1 cut(s)	1261
AccI	GTMKAC	2 cut(s)	982, 1938
AciI	CCGC	1 cut(s)	757
AclWI	GGATC	4 cut(s)	62, 910, 1104, 1323
AcoI	YGGCCR	1 cut(s)	310
AcsI	RAATTY	5 cut(s)	653, 1441, 2168, 2179, 2212
AcuI	CTGAAG	2 cut(s)	413, 591
AcyI	GRCGYC	2 cut(s)	1869, 2112
AfaI	GTAC	7 cut(s)	764, 1325, 1370, 1397, 1412, 1560, 1980
AfeI	AGCGCT	1 cut(s)	251
AfiI	CCNNNNNNNGG	4 cut(s)	423, 1261, 1513, 1857
AflIII	ACRYGT	2 cut(s)	676, 1413
AgsI	TTSAA	9 cut(s)	53, 115, 784, 841, 1072, 1393, 1790, 1856, 2049
AjnI	CCWGG	2 cut(s)	1114, 1384
AjuI	GAANNNNNNNTTGG	2 cut(s)	1009, 1041
AluBI	AGCT	8 cut(s)	499, 1511, 1534, 1707, 1758, 2090, 2158, 2175
AluI	AGCT	8 cut(s)	499, 1511, 1534, 1707, 1758, 2090, 2158, 2175
Alw21I	GWGCWC	3 cut(s)	1513, 1536, 2160
Alw26I	GTCTC	5 cut(s)	560, 821, 1512, 2023, 2106
AlwI	GGATC	4 cut(s)	62, 910, 1104, 1323
AlwNI	CAGNNNCTG	1 cut(s)	1987
Ama87I	CYCGRG	1 cut(s)	1477
Aor51HI	AGCGCT	1 cut(s)	251
AoxI	GGCC	5 cut(s)	310, 736, 1208, 1724, 1815
ApeKI	GCWGC	4 cut(s)	821, 1081, 2084, 2087
ApoI	RAATTY	5 cut(s)	653, 1441, 2168, 2179, 2212
AspLEI	GCGC	2 cut(s)	252, 1966
AspS9I	GGNCC	7 cut(s)	31, 120, 300, 736, 1208, 1589, 1815
AsuC2I	CCSGG	5 cut(s)	424, 1060, 1206, 1478, 1479
AsuHPI	GGTGA	3 cut(s)	500, 526, 1453
AsuII	TTCGAA	1 cut(s)	1446
AvaI	CYCGRG	1 cut(s)	1477
AvaII	GGWCC	4 cut(s)	31, 120, 300, 1589
BalI	TGGCCA	1 cut(s)	312
BanI	GGYRCC	1 cut(s)	82
BanII	GRGCYC	4 cut(s)	1513, 1536, 1603, 2160
BbsI	GAAGAC	4 cut(s)	402, 417, 1337, 2107
Bbv12I	GWGCWC	3 cut(s)	1513, 1536, 2160
BbvI	GCAGC	4 cut(s)	808, 1093, 2071, 2099
BccI	CCATC	5 cut(s)	43, 353, 1202, 1472, 1908
BceAI	ACGGC	1 cut(s)	1350
BcgI	CGANNNNNNTGC	2 cut(s)	786, 820
BciT130I	CCWGG	2 cut(s)	1116, 1386
BcnI	CCSGG	5 cut(s)	424, 1060, 1206, 1478, 1479
BcoDI	GTCTC	5 cut(s)	560, 821, 1512, 2023, 2106
BfaI	CTAG	2 cut(s)	2165, 2218
BfmI	CTRYAG	3 cut(s)	1527, 1708, 2085
BfoI	RGCGCY	1 cut(s)	253
BfuAI	ACCTGC	1 cut(s)	311
BisI	GCNGC	4 cut(s)	822, 1082, 2085, 2088
BlpI	GCTNAGC	1 cut(s)	1772
BlsI	GCNGC	4 cut(s)	823, 1083, 2086, 2089
Bme1390I	CCNGG	7 cut(s)	424, 1060, 1116, 1206, 1386, 1478, 1479
Bme18I	GGWCC	4 cut(s)	31, 120, 300, 1589
BmeT110I	CYCGRG	1 cut(s)	1477
BmgT120I	GGNCC	7 cut(s)	31, 120, 300, 736, 1208, 1589, 1815
BmiI	GGNNCC	9 cut(s)	33, 84, 191, 301, 1209, 1590, 1591, 1600, 1849
BmrFI	CCNGG	7 cut(s)	424, 1060, 1116, 1206, 1386, 1478, 1479
BmrI	ACTGGG	1 cut(s)	1134
BmsI	GCATC	7 cut(s)	217, 313, 788, 1006, 1462, 1686, 1942
BmuI	ACTGGG	1 cut(s)	1134
BoxI	GACNNNNGTC	1 cut(s)	1934
BpiI	GAAGAC	4 cut(s)	402, 417, 1337, 2107
BplI	GAGNNNNNCTC	2 cut(s)	1366, 1398
BpmI	CTGGAG	4 cut(s)	712, 1098, 1368, 1791
Bpu1102I	GCTNAGC	1 cut(s)	1772
Bpu14I	TTCGAA	1 cut(s)	1446
BpuEI	CTTGAG	5 cut(s)	818, 1199, 1393, 1406, 1513
BpuMI	CCSGG	5 cut(s)	424, 1060, 1206, 1478, 1479
BsaBI	GATNNNNATC	1 cut(s)	968
BsaHI	GRCGYC	2 cut(s)	1869, 2112
BsaI	GGTCTC	1 cut(s)	821
BsaJI	CCNNGG	6 cut(s)	72, 1034, 1205, 1476, 1477, 1974
BsaXI	ACNNNNNCTCC	4 cut(s)	1096, 1126, 1789, 1819
Bsc4I	CCNNNNNNNGG	4 cut(s)	423, 1261, 1513, 1857
Bse1I	ACTGG	7 cut(s)	695, 760, 863, 982, 1129, 1526, 2197
Bse3DI	GCAATG	2 cut(s)	564, 1053
Bse8I	GATNNNNATC	1 cut(s)	968
BseBI	CCWGG	2 cut(s)	1116, 1386
BseDI	CCNNGG	6 cut(s)	72, 1034, 1205, 1476, 1477, 1974
BseGI	GGATG	3 cut(s)	1453, 1503, 1882
BseJI	GATNNNNATC	1 cut(s)	968
BseLI	CCNNNNNNNGG	4 cut(s)	423, 1261, 1513, 1857
BseMI	GCAATG	2 cut(s)	564, 1053
BseNI	ACTGG	7 cut(s)	695, 760, 863, 982, 1129, 1526, 2197
BseRI	GAGGAG	5 cut(s)	154, 352, 355, 521, 524
BseXI	GCAGC	4 cut(s)	808, 1093, 2071, 2099
BseYI	CCCAGC	1 cut(s)	1261
BsgI	GTGCAG	1 cut(s)	1100
BshFI	GGCC	5 cut(s)	312, 738, 1210, 1726, 1817
BshNI	GGYRCC	1 cut(s)	82
BsiHKAI	GWGCWC	3 cut(s)	1513, 1536, 2160
BsiHKCI	CYCGRG	1 cut(s)	1477
BsiSI	CCGG	4 cut(s)	424, 1059, 1205, 1478
BslFI	GGGAC	4 cut(s)	302, 313, 988, 1602
BslI	CCNNNNNNNGG	4 cut(s)	423, 1261, 1513, 1857
BsmAI	GTCTC	5 cut(s)	560, 821, 1512, 2023, 2106
BsmBI	CGTCTC	1 cut(s)	2106
BsmFI	GGGAC	4 cut(s)	302, 313, 988, 1602
BsnI	GGCC	5 cut(s)	312, 738, 1210, 1726, 1817
Bso31I	GGTCTC	1 cut(s)	821
BsoBI	CYCGRG	1 cut(s)	1477
Bsp119I	TTCGAA	1 cut(s)	1446
Bsp1286I	GDGCHC	4 cut(s)	1513, 1536, 1603, 2160
Bsp1407I	TGTACA	1 cut(s)	1410
Bsp143I	GATC	6 cut(s)	67, 893, 915, 1096, 1315, 1432
Bsp1720I	GCTNAGC	1 cut(s)	1772
Bsp19I	CCATGG	2 cut(s)	72, 1974
BspACI	CCGC	1 cut(s)	757
BspANI	GGCC	5 cut(s)	312, 738, 1210, 1726, 1817
BspLI	GGNNCC	9 cut(s)	33, 84, 191, 301, 1209, 1590, 1591, 1600, 1849
BspMAI	CTGCAG	1 cut(s)	2089
BspMI	ACCTGC	1 cut(s)	311
BspPI	GGATC	4 cut(s)	62, 910, 1104, 1323
BspQI	GCTCTTC	1 cut(s)	1286
BspT104I	TTCGAA	1 cut(s)	1446
BspT107I	GGYRCC	1 cut(s)	82
BspTNI	GGTCTC	1 cut(s)	821
BsrDI	GCAATG	2 cut(s)	564, 1053
BsrGI	TGTACA	1 cut(s)	1410
BsrI	ACTGG	7 cut(s)	695, 760, 863, 982, 1129, 1526, 2197
BssECI	CCNNGG	6 cut(s)	72, 1034, 1205, 1476, 1477, 1974
BssMI	GATC	6 cut(s)	67, 893, 915, 1096, 1315, 1432
BssNAI	GTATAC	1 cut(s)	983
BssNI	GRCGYC	2 cut(s)	1869, 2112
BssT1I	CCWWGG	3 cut(s)	72, 1034, 1974
Bst1107I	GTATAC	1 cut(s)	983
Bst2UI	CCWGG	2 cut(s)	1116, 1386
Bst4CI	ACNGT	9 cut(s)	318, 488, 886, 1295, 1368, 1700, 1768, 1959, 2123
Bst6I	CTCTTC	1 cut(s)	1286
BstACI	GRCGYC	2 cut(s)	1869, 2112
BstAPI	GCANNNNNTGC	2 cut(s)	818, 1961
BstAUI	TGTACA	1 cut(s)	1410
BstBI	TTCGAA	1 cut(s)	1446
BstDSI	CCRYGG	2 cut(s)	72, 1974
BstF5I	GGATG	3 cut(s)	1453, 1503, 1882
BstH2I	RGCGCY	1 cut(s)	253
BstHHI	GCGC	2 cut(s)	252, 1966
BstKTI	GATC	6 cut(s)	70, 896, 918, 1099, 1318, 1435
BstMAI	GTCTC	5 cut(s)	560, 821, 1512, 2023, 2106
BstMBI	GATC	6 cut(s)	67, 893, 915, 1096, 1315, 1432
BstMWI	GCNNNNNNNGC	2 cut(s)	818, 1961
BstNI	CCWGG	2 cut(s)	1116, 1386
BstNSI	RCATGY	3 cut(s)	680, 1417, 1997
BstPAI	GACNNNNGTC	1 cut(s)	1934
BstSCI	CCNGG	7 cut(s)	422, 1058, 1114, 1204, 1384, 1476, 1477
BstSFI	CTRYAG	3 cut(s)	1527, 1708, 2085
BstV1I	GCAGC	4 cut(s)	808, 1093, 2071, 2099
BstV2I	GAAGAC	4 cut(s)	402, 417, 1337, 2107
BstX2I	RGATCY	1 cut(s)	1096
BstXI	CCANNNNNNTGG	1 cut(s)	42
BstYI	RGATCY	1 cut(s)	1096
BstZ17I	GTATAC	1 cut(s)	983
BsuRI	GGCC	5 cut(s)	312, 738, 1210, 1726, 1817
BtgI	CCRYGG	2 cut(s)	72, 1974
BtgZI	GCGATG	1 cut(s)	1663
BtsCI	GGATG	3 cut(s)	1453, 1503, 1882
BtsI	GCAGTG	3 cut(s)	105, 136, 1750
BtsIMutI	CAGTG	5 cut(s)	105, 136, 1364, 1750, 2135
BveI	ACCTGC	1 cut(s)	311
CaiI	CAGNNNCTG	1 cut(s)	1987
CfoI	GCGC	2 cut(s)	252, 1966
Cfr13I	GGNCC	7 cut(s)	31, 120, 300, 736, 1208, 1589, 1815
Cfr9I	CCCGGG	1 cut(s)	1477
CseI	GACGC	3 cut(s)	1858, 1924, 2101
Csp6I	GTAC	7 cut(s)	763, 1324, 1369, 1396, 1411, 1559, 1979
CviQI	GTAC	7 cut(s)	763, 1324, 1369, 1396, 1411, 1559, 1979
DpnI	GATC	6 cut(s)	69, 895, 917, 1098, 1317, 1434
DpnII	GATC	6 cut(s)	67, 893, 915, 1096, 1315, 1432
DraI	TTTAAA	2 cut(s)	90, 1864
EaeI	YGGCCR	1 cut(s)	310
Eam1104I	CTCTTC	1 cut(s)	1286
EarI	CTCTTC	1 cut(s)	1286
Ecl136II	GAGCTC	3 cut(s)	1511, 1534, 2158
Eco130I	CCWWGG	3 cut(s)	72, 1034, 1974
Eco147I	AGGCCT	1 cut(s)	1726
Eco24I	GRGCYC	4 cut(s)	1513, 1536, 1603, 2160
Eco31I	GGTCTC	1 cut(s)	821
Eco32I	GATATC	1 cut(s)	1690
Eco47I	GGWCC	4 cut(s)	31, 120, 300, 1589
Eco47III	AGCGCT	1 cut(s)	251
Eco53kI	GAGCTC	3 cut(s)	1511, 1534, 2158
Eco57I	CTGAAG	2 cut(s)	413, 591
Eco88I	CYCGRG	1 cut(s)	1477
EcoICRI	GAGCTC	3 cut(s)	1511, 1534, 2158
EcoO109I	RGGNCCY	5 cut(s)	31, 300, 1208, 1589, 1815
EcoRII	CCWGG	2 cut(s)	1114, 1384
EcoRV	GATATC	1 cut(s)	1690
EcoT14I	CCWWGG	3 cut(s)	72, 1034, 1974
EcoT22I	ATGCAT	1 cut(s)	328
EcoT38I	GRGCYC	4 cut(s)	1513, 1536, 1603, 2160
ErhI	CCWWGG	3 cut(s)	72, 1034, 1974
Esp3I	CGTCTC	1 cut(s)	2106
FalI	AAGNNNNNCTT	4 cut(s)	411, 443, 1577, 1609
FaqI	GGGAC	4 cut(s)	302, 313, 988, 1602
FblI	GTMKAC	2 cut(s)	982, 1938
Fnu4HI	GCNGC	4 cut(s)	822, 1082, 2085, 2088
FokI	GGATG	3 cut(s)	1440, 1490, 1889
FriOI	GRGCYC	4 cut(s)	1513, 1536, 1603, 2160
Fsp4HI	GCNGC	4 cut(s)	822, 1082, 2085, 2088
FspBI	CTAG	2 cut(s)	2165, 2218
GlaI	GCGC	2 cut(s)	251, 1965
GluI	GCNGC	4 cut(s)	822, 1082, 2085, 2088
GsaI	CCCAGC	1 cut(s)	1265
GsuI	CTGGAG	4 cut(s)	712, 1098, 1368, 1791
HaeII	RGCGCY	1 cut(s)	253
HaeIII	GGCC	5 cut(s)	312, 738, 1210, 1726, 1817
HapII	CCGG	4 cut(s)	424, 1059, 1205, 1478
HgaI	GACGC	3 cut(s)	1858, 1924, 2101
HhaI	GCGC	2 cut(s)	252, 1966
Hin1I	GRCGYC	2 cut(s)	1869, 2112
Hin6I	GCGC	2 cut(s)	250, 1964
HinP1I	GCGC	2 cut(s)	250, 1964
HincII	GTYRAC	1 cut(s)	1833
HindII	GTYRAC	1 cut(s)	1833
HindIII	AAGCTT	1 cut(s)	1756
HpaI	GTTAAC	1 cut(s)	1833
HpaII	CCGG	4 cut(s)	424, 1059, 1205, 1478
HphI	GGTGA	3 cut(s)	500, 526, 1453
Hpy166II	GTNNAC	6 cut(s)	355, 730, 983, 1501, 1833, 1939
Hpy188III	TCNNGA	9 cut(s)	136, 973, 1183, 1216, 1313, 1430, 1808, 2049, 2103
Hpy8I	GTNNAC	6 cut(s)	355, 730, 983, 1501, 1833, 1939
HpyAV	CCTTC	6 cut(s)	14, 174, 211, 1168, 1249, 1940
HpyCH4III	ACNGT	9 cut(s)	318, 488, 886, 1295, 1368, 1700, 1768, 1959, 2123
HpyCH4IV	ACGT	1 cut(s)	732
HpyF10VI	GCNNNNNNNGC	2 cut(s)	818, 1961
HpySE526I	ACGT	1 cut(s)	732
Hsp92I	GRCGYC	2 cut(s)	1869, 2112
HspAI	GCGC	2 cut(s)	250, 1964
KflI	GGGWCCC	1 cut(s)	1589
KspAI	GTTAAC	1 cut(s)	1833
Kzo9I	GATC	6 cut(s)	67, 893, 915, 1096, 1315, 1432
LguI	GCTCTTC	1 cut(s)	1286
LmnI	GCTCC	4 cut(s)	189, 1598, 1658, 2155
Lsp1109I	GCAGC	4 cut(s)	808, 1093, 2071, 2099
LweI	GCATC	7 cut(s)	217, 313, 788, 1006, 1462, 1686, 1942
MaeI	CTAG	2 cut(s)	2165, 2218
MaeII	ACGT	1 cut(s)	732
MaeIII	GTNAC	6 cut(s)	476, 488, 514, 908, 1088, 1102
MalI	GATC	6 cut(s)	69, 895, 917, 1098, 1317, 1434
MboI	GATC	6 cut(s)	67, 893, 915, 1096, 1315, 1432
MflI	RGATCY	1 cut(s)	1096
MhlI	GDGCHC	4 cut(s)	1513, 1536, 1603, 2160
MlsI	TGGCCA	1 cut(s)	312
MluNI	TGGCCA	1 cut(s)	312
MlyI	GAGTC	4 cut(s)	407, 598, 1739, 1798
MmeI	TCCRAC	3 cut(s)	483, 2009, 2156
Mox20I	TGGCCA	1 cut(s)	312
Mph1103I	ATGCAT	1 cut(s)	328
MscI	TGGCCA	1 cut(s)	312
MslI	CAYNNNNRTG	4 cut(s)	40, 99, 681, 1743
Msp20I	TGGCCA	1 cut(s)	312
MspI	CCGG	4 cut(s)	424, 1059, 1205, 1478
MspR9I	CCNGG	7 cut(s)	424, 1060, 1116, 1206, 1386, 1478, 1479
MvaI	CCWGG	2 cut(s)	1116, 1386
MwoI	GCNNNNNNNGC	2 cut(s)	818, 1961
NciI	CCSGG	5 cut(s)	424, 1060, 1206, 1478, 1479
NcoI	CCATGG	2 cut(s)	72, 1974
NdeII	GATC	6 cut(s)	67, 893, 915, 1096, 1315, 1432
NlaIV	GGNNCC	9 cut(s)	33, 84, 191, 301, 1209, 1590, 1591, 1600, 1849
NmuCI	GTSAC	3 cut(s)	476, 488, 514
NsiI	ATGCAT	1 cut(s)	328
NspI	RCATGY	3 cut(s)	680, 1417, 1997
NspV	TTCGAA	1 cut(s)	1446
PceI	AGGCCT	1 cut(s)	1726
PciI	ACATGT	2 cut(s)	676, 1413
PciSI	GCTCTTC	1 cut(s)	1286
PfeI	GAWTC	6 cut(s)	221, 622, 640, 990, 1389, 2193
PflMI	CCANNNNNTGG	1 cut(s)	1261
PfoI	TCCNGGA	1 cut(s)	1384
PkrI	GCNGC	4 cut(s)	823, 1083, 2086, 2089
PleI	GAGTC	4 cut(s)	407, 598, 1738, 1798
PpsI	GAGTC	4 cut(s)	407, 598, 1738, 1798
PpuMI	RGGWCCY	3 cut(s)	31, 300, 1589
PscI	ACATGT	2 cut(s)	676, 1413
PshAI	GACNNNNGTC	1 cut(s)	1934
PsiI	TTATAA	1 cut(s)	1145
Psp124BI	GAGCTC	3 cut(s)	1513, 1536, 2160
Psp5II	RGGWCCY	3 cut(s)	31, 300, 1589
Psp6I	CCWGG	2 cut(s)	1114, 1384
PspFI	CCCAGC	1 cut(s)	1261
PspGI	CCWGG	2 cut(s)	1114, 1384
PspN4I	GGNNCC	9 cut(s)	33, 84, 191, 301, 1209, 1590, 1591, 1600, 1849
PspPI	GGNCC	7 cut(s)	31, 120, 300, 736, 1208, 1589, 1815
PspPPI	RGGWCCY	3 cut(s)	31, 300, 1589
PstI	CTGCAG	1 cut(s)	2089
PstNI	CAGNNNCTG	1 cut(s)	1987
PsuI	RGATCY	1 cut(s)	1096
RsaI	GTAC	7 cut(s)	764, 1325, 1370, 1397, 1412, 1560, 1980
RsaNI	GTAC	7 cut(s)	763, 1324, 1369, 1396, 1411, 1559, 1979
RseI	CAYNNNNRTG	4 cut(s)	40, 99, 681, 1743
SacI	GAGCTC	3 cut(s)	1513, 1536, 2160
SapI	GCTCTTC	1 cut(s)	1286
SatI	GCNGC	4 cut(s)	822, 1082, 2085, 2088
Sau3AI	GATC	6 cut(s)	67, 893, 915, 1096, 1315, 1432
Sau96I	GGNCC	7 cut(s)	31, 120, 300, 736, 1208, 1589, 1815
SchI	GAGTC	4 cut(s)	407, 598, 1739, 1798
ScrFI	CCNGG	7 cut(s)	424, 1060, 1116, 1206, 1386, 1478, 1479
SduI	GDGCHC	4 cut(s)	1513, 1536, 1603, 2160
SfaNI	GCATC	7 cut(s)	217, 313, 788, 1006, 1462, 1686, 1942
SfcI	CTRYAG	3 cut(s)	1527, 1708, 2085
SfuI	TTCGAA	1 cut(s)	1446
SinI	GGWCC	4 cut(s)	31, 120, 300, 1589
SmaI	CCCGGG	1 cut(s)	1479
SmiMI	CAYNNNNRTG	4 cut(s)	40, 99, 681, 1743
SmlI	CTYRAG	5 cut(s)	833, 1214, 1372, 1421, 1492
SmoI	CTYRAG	5 cut(s)	833, 1214, 1372, 1421, 1492
SseBI	AGGCCT	1 cut(s)	1726
SsiI	CCGC	1 cut(s)	757
SspI	AATATT	1 cut(s)	1308
SspMI	CTAG	2 cut(s)	2165, 2218
SstI	GAGCTC	3 cut(s)	1513, 1536, 2160
StuI	AGGCCT	1 cut(s)	1726
StyD4I	CCNGG	7 cut(s)	422, 1058, 1114, 1204, 1384, 1476, 1477
StyI	CCWWGG	3 cut(s)	72, 1034, 1974
TaaI	ACNGT	9 cut(s)	318, 488, 886, 1295, 1368, 1700, 1768, 1959, 2123
TaiI	ACGT	1 cut(s)	735
TaqI	TCGA	5 cut(s)	60, 796, 1446, 2010, 2104
TatI	WGTACW	3 cut(s)	1368, 1410, 1558
TfiI	GAWTC	6 cut(s)	221, 622, 640, 990, 1389, 2193
TscAI	CASTG	5 cut(s)	112, 136, 1371, 1750, 2142
TseFI	GTSAC	3 cut(s)	476, 488, 514
TseI	GCWGC	4 cut(s)	821, 1081, 2084, 2087
Tsp45I	GTSAC	3 cut(s)	476, 488, 514
TspDTI	ATGAA	8 cut(s)	17, 33, 423, 699, 1017, 1273, 1660, 2172
TspGWI	ACGGA	2 cut(s)	533, 765
TspMI	CCCGGG	1 cut(s)	1477
TspRI	CASTG	5 cut(s)	112, 136, 1371, 1750, 2142
Van91I	CCANNNNNTGG	1 cut(s)	1261
VpaK11BI	GGWCC	4 cut(s)	31, 120, 300, 1589
XapI	RAATTY	5 cut(s)	653, 1441, 2168, 2179, 2212
XceI	RCATGY	3 cut(s)	680, 1417, 1997
XmaI	CCCGGG	1 cut(s)	1477
XmiI	GTMKAC	2 cut(s)	982, 1938
XspI	CTAG	2 cut(s)	2165, 2218
Zsp2I	ATGCAT	1 cut(s)	328

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.