Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0010309

Physical Location & Seq

Genomic Coordinates Forward (+)

22802924 .. 22807237

Gene Structure 4314 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00018690.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2274 bp

ATGAACATCTCAGAAAATGAAGGTAAGGAGGACCCATCAAAATGGGGGCTTCAAAACATCGAAATTGATCCCATGGTTGAGGTGCCTTTAAATAATTCCAATGACACTGCATTGAAAAGGACCAATAGCAGTGTCAGGAGGAGAAATGCGTTTCAGGGAAATGTTCGTGGTAGCATGGGAAGGATTAGGAGCCTACATTTTCTTAATATCAAAGGGAAGGAATCAGATGCATGGAAGCCTATGGAGAAGCGCTTTAATCAATATGCAGTTGATAATAGGCTCAGTAGGGACAACTTTGGGACCTGCATTGGAATGGGTGGACGAGAATCGAAGGACTTTGCAGGCCAACTGTTTGATGCATTATGTAGGAGGAGGAGGATAAATGTAAATGATGGGATTACTAGTGAAGAATTCAGGTTGTTTTGGGAAGACTTGACTAATGAAGACTCCGAAGCCCGGCTTCAGATATTCTTTGACATGTGTGACAAGAACGGTGACGGGAAGCTGTCGGAGGAGGAAGTGACGGAGGTTATAGTTTTGAGTGCTTCCACGAACAAGTTGGCAAATCTTAAACAGCAAGCAGCATCATATGCAGCTTTGATCATGGAAGAGCTTGATCCTGACCACCTCGGATATATAGAGATGTGGCAGTTAGAAACTCTACTTAGGGAAATGGCAATGGCTGAGACCGAAGTAAAACCAAAACTTTGCAAGAAAACCCAAACTCTCGCAAGAGCCATGATTCCCAGAAGATACAGGAATCCTATGAGCAAATTCGTATCTACTACCATAGAACGTGTCCATGAAAACTGGAGGAAAATATGGGTTATTTCGTTGTGGTTAGCAGTAAACGTGGGCCTCTTTGCTTGGAAATACCGCCAGTACCAGAAAAATCCGTTATTCAAAATCATGGGTCGATGCCTCTGCTTTGCAAAGGGTTCTGCTGAGACCCTCAAGTTCAACATGGCTCTCATTCTCATTCCAGTTTGTAGGGGAACTCTTACAGTCCTTAGATCAACATTTTTAAGTAACTTGATCCCTTTTGATGACAATATCAATTTCCATAAGTTGATTGCATTGGGGATAACAATCGGGACTGGTATACATGGAATCATGCATCTAACTTGCGATTTTCCAAGATTGATTTCATGTCCAAGGGGTCAGTTCTTGGACATTGCCGGGCGTTATTTCAATTCTGTGCAGCCAAGTTACATGGATCTGGTTACAACTACTCCAGGCATAACTGGGATTATCATCGTTGATCAATGGTACAAGAAGACGACATGGATGTATGTATCAGTTCCAGTATTATTGTATGCAACTGAACGTTTGGTCACACTTCTTCAAGAATATTCACACCCTGTCTCTGTCATTAAGGCGATAACTTATACAGGAAATGTTCTCGCACTGTACTTGAGCAAACCTCCAGGATTCAAGTACGAAAGTGGAATGTACATGTTTCTCAAGTGTCCTGATCTATCAAATTTCGAATGGCATCCTTTCACCATCACTTCTGCCCCGGGAGATGATTACTTGAGTGTCCACATCCGAGCTCTGGGAGACTGGACTACAGAGCTCAGAAACATCTTCTCTGAGATCCTTTCATTTAACATATGCAGATATCCGAAGATTGTAGTAAAGGGACCCTTTGGAGCCCCTGCTCAGAATTACACCAAGTATGACATCTTATTGCTCATAGGTCTTGGAATTGGAGCAACTCCTTTCATCAGCATTGCAAAAGACATCATAAACCGTATAAGCTACAGATATGGTCAAAGGCCTGAGTCAGCACATGGCAGTGAAGAAAGAAGCTTAGAAACTGTGCTAAGCACCCACCAACTTGAAACGAATACAAGGACTCCAGAAAGGGCCTACTTTTATTGGTTAACAAGGGAACAAGGTTCCTTTGAATGGTTTAAAGGCGTCATGGATGATATTGCCGAGTATGACAACCATCAAGTGATAGAAATGCACACCTACTTGACAAGCGTCTATGAAGAAGGAGATGCACGGTCTGCACTTATTACCATGGTACAGAAACTGCAACATGCTAAGAATGGGGTCGATGTCGTCTCAGAAAGTCGGATAAGGACACATTTTTCAAGACCTAATTGGAGAAAGGTGTTTTCGGACTTGGCTGCAGCTCATCAATCGTCTCGAATAGGCGTCTTCTACTGTGGAAGTCCAACACTGATTAAAACACTAAAGGAGCTCTGCCTAGAATTTAGCTTAAATTCATCCACCCGATTCCAGTTCCACAAGGAGAATTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04013 ko04624 map04013 map04624

Pfam Domains

Protein Families

EF-hand_6 FAD_binding_8 Ferric_reduct NADPH_Ox NAD_binding_6

Protein Analysis

757

Amino Acids

86.81

Weight (kDa)

8.58

Isoelectric Point (pI)

41.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NADPH_Ox	PF08414	61 - 149	8e-25	Respiratory burst NADPH oxidase
FAD_binding_8	PF08022	455 - 554	3.2e-28	FAD-binding domain
NAD_binding_6	PF08030	560 - 739	7.8e-48	Ferric reductase NAD binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010309)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G45810 AT5G60010
fragaria_vesca	FvH4_3g34420
malus_domestica	MD03G1106300.v1.1 MD11G1118400.v1.1
prunus_persica	Prupe.6G088800_v2.0.a1 Prupe.6G088800_v2.0.a1
pyrus_communis	pycom03g08540 pycom11g09950
rosa_chinensis	RchiOBHm_Chr5g0062021
rosa_laevigata	RLG00000035526
rosa_multiflora	Rmu_sc0002296.1_g000006 Rmu_sc0017669.1_g000002
rosa_roxburghii	Rroxscaffold_1G00018690
rosa_rugosa	Rorug05G0345500 Rorug05G0345600
rosa_samantha	Rh5AG406800 Rh5BG420200 Rh5CG444300 Rh5DG435600
rosa_wichuraiana	Rw5G038340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	311
AccB1I	GGYRCC	1 cut(s)	82
AccI	GTMKAC	1 cut(s)	1102
AciI	CCGC	1 cut(s)	877
AclI	AACGTT	1 cut(s)	1327
AclWI	GGATC	5 cut(s)	62, 611, 1030, 1224, 1591
AcsI	RAATTY	6 cut(s)	410, 773, 1483, 2222, 2233, 2266
AcuI	CTGAAG	1 cut(s)	446
AcyI	GRCGYC	2 cut(s)	1923, 2166
AfaI	GTAC	6 cut(s)	884, 1271, 1412, 1439, 1454, 2034
AfeI	AGCGCT	1 cut(s)	251
AfiI	CCNNNNNNNGG	3 cut(s)	456, 1555, 1911
AflIII	ACRYGT	3 cut(s)	477, 796, 1455
AhlI	ACTAGT	1 cut(s)	401
AjnI	CCWGG	2 cut(s)	1234, 1426
AjuI	GAANNNNNNNTTGG	2 cut(s)	1129, 1161
Alw21I	GWGCWC	3 cut(s)	1555, 1578, 2214
Alw26I	GTCTC	6 cut(s)	680, 941, 1369, 1554, 2077, 2160
AlwI	GGATC	5 cut(s)	62, 611, 1030, 1224, 1591
AlwNI	CAGNNNCTG	1 cut(s)	2041
Ama87I	CYCGRG	1 cut(s)	1519
Aor51HI	AGCGCT	1 cut(s)	251
AoxI	GGCC	4 cut(s)	343, 856, 1778, 1869
ApeKI	GCWGC	5 cut(s)	581, 593, 1201, 2138, 2141
ApoI	RAATTY	6 cut(s)	410, 773, 1483, 2222, 2233, 2266
AspLEI	GCGC	1 cut(s)	252
AspS9I	GGNCC	6 cut(s)	31, 120, 300, 856, 1643, 1869
AsuC2I	CCSGG	4 cut(s)	457, 1180, 1520, 1521
AsuHPI	GGTGA	2 cut(s)	506, 1495
AsuII	TTCGAA	1 cut(s)	1488
AvaI	CYCGRG	1 cut(s)	1519
AvaII	GGWCC	4 cut(s)	31, 120, 300, 1643
BanI	GGYRCC	1 cut(s)	82
BanII	GRGCYC	4 cut(s)	1555, 1578, 1657, 2214
BbsI	GAAGAC	4 cut(s)	435, 450, 1283, 2161
Bbv12I	GWGCWC	3 cut(s)	1555, 1578, 2214
BbvI	GCAGC	5 cut(s)	593, 605, 1213, 2125, 2153
BccI	CCATC	4 cut(s)	43, 386, 1514, 1962
BcgI	CGANNNNNNTGC	2 cut(s)	906, 940
BciT130I	CCWGG	2 cut(s)	1236, 1428
BclI	TGATCA	2 cut(s)	600, 1261
BcnI	CCSGG	4 cut(s)	457, 1180, 1520, 1521
BcoDI	GTCTC	6 cut(s)	680, 941, 1369, 1554, 2077, 2160
BcuI	ACTAGT	1 cut(s)	401
BfaI	CTAG	3 cut(s)	402, 2219, 2272
BfmI	CTRYAG	3 cut(s)	1569, 1762, 2139
BfoI	RGCGCY	1 cut(s)	253
BfuAI	ACCTGC	1 cut(s)	311
BisI	GCNGC	5 cut(s)	582, 594, 1202, 2139, 2142
BlpI	GCTNAGC	1 cut(s)	1826
BlsI	GCNGC	5 cut(s)	583, 595, 1203, 2140, 2143
Bme1390I	CCNGG	6 cut(s)	457, 1180, 1236, 1428, 1520, 1521
Bme18I	GGWCC	4 cut(s)	31, 120, 300, 1643
BmeT110I	CYCGRG	1 cut(s)	1519
BmgT120I	GGNCC	6 cut(s)	31, 120, 300, 856, 1643, 1869
BmiI	GGNNCC	8 cut(s)	33, 84, 191, 301, 1644, 1645, 1654, 1903
BmrFI	CCNGG	6 cut(s)	457, 1180, 1236, 1428, 1520, 1521
BmrI	ACTGGG	1 cut(s)	1254
BmsI	GCATC	7 cut(s)	217, 346, 593, 908, 1126, 1504, 1996
BmuI	ACTGGG	1 cut(s)	1254
BoxI	GACNNNNGTC	1 cut(s)	1988
BpiI	GAAGAC	4 cut(s)	435, 450, 1283, 2161
BplI	GAGNNNNNCTC	2 cut(s)	1408, 1440
BpmI	CTGGAG	4 cut(s)	832, 1218, 1410, 1845
Bpu1102I	GCTNAGC	1 cut(s)	1826
Bpu14I	TTCGAA	1 cut(s)	1488
BpuEI	CTTGAG	4 cut(s)	938, 1435, 1448, 1555
BpuMI	CCSGG	4 cut(s)	457, 1180, 1520, 1521
BsaBI	GATNNNNATC	2 cut(s)	1088, 1253
BsaHI	GRCGYC	2 cut(s)	1923, 2166
BsaI	GGTCTC	2 cut(s)	680, 941
BsaJI	CCNNGG	6 cut(s)	72, 628, 1154, 1518, 1519, 2028
BsaXI	ACNNNNNCTCC	4 cut(s)	1216, 1246, 1843, 1873
Bsc4I	CCNNNNNNNGG	3 cut(s)	456, 1555, 1911
Bse1I	ACTGG	8 cut(s)	815, 880, 983, 1102, 1249, 1304, 1568, 2251
Bse3DI	GCAATG	3 cut(s)	684, 1173, 1731
Bse8I	GATNNNNATC	2 cut(s)	1088, 1253
BseBI	CCWGG	2 cut(s)	1236, 1428
BseDI	CCNNGG	6 cut(s)	72, 628, 1154, 1518, 1519, 2028
BseGI	GGATG	5 cut(s)	1293, 1495, 1545, 1936, 2237
BseJI	GATNNNNATC	2 cut(s)	1088, 1253
BseLI	CCNNNNNNNGG	3 cut(s)	456, 1555, 1911
BseMI	GCAATG	3 cut(s)	684, 1173, 1731
BseMII	CTCAG	9 cut(s)	24, 295, 675, 936, 1584, 1591, 1676, 1773, 2088
BseNI	ACTGG	8 cut(s)	815, 880, 983, 1102, 1249, 1304, 1568, 2251
BseRI	GAGGAG	4 cut(s)	154, 385, 388, 527
BseXI	GCAGC	5 cut(s)	593, 605, 1213, 2125, 2153
BsgI	GTGCAG	2 cut(s)	1220, 2001
BshFI	GGCC	4 cut(s)	345, 858, 1780, 1871
BshNI	GGYRCC	1 cut(s)	82
BsiHKAI	GWGCWC	3 cut(s)	1555, 1578, 2214
BsiHKCI	CYCGRG	1 cut(s)	1519
BsiSI	CCGG	3 cut(s)	457, 1179, 1520
BslFI	GGGAC	4 cut(s)	302, 313, 1108, 1656
BslI	CCNNNNNNNGG	3 cut(s)	456, 1555, 1911
BsmAI	GTCTC	6 cut(s)	680, 941, 1369, 1554, 2077, 2160
BsmBI	CGTCTC	2 cut(s)	2077, 2160
BsmFI	GGGAC	4 cut(s)	302, 313, 1108, 1656
BsnI	GGCC	4 cut(s)	345, 858, 1780, 1871
Bso31I	GGTCTC	2 cut(s)	680, 941
BsoBI	CYCGRG	1 cut(s)	1519
Bsp119I	TTCGAA	1 cut(s)	1488
Bsp1286I	GDGCHC	4 cut(s)	1555, 1578, 1657, 2214
Bsp1407I	TGTACA	1 cut(s)	1452
Bsp143I	GATC	9 cut(s)	67, 600, 616, 1013, 1035, 1216, 1261, 1474, 1596
Bsp1720I	GCTNAGC	1 cut(s)	1826
Bsp19I	CCATGG	2 cut(s)	72, 2028
BspACI	CCGC	1 cut(s)	877
BspANI	GGCC	4 cut(s)	345, 858, 1780, 1871
BspCNI	CTCAG	9 cut(s)	23, 294, 676, 937, 1585, 1590, 1675, 1774, 2087
BspLI	GGNNCC	8 cut(s)	33, 84, 191, 301, 1644, 1645, 1654, 1903
BspMAI	CTGCAG	1 cut(s)	2143
BspMI	ACCTGC	1 cut(s)	311
BspPI	GGATC	5 cut(s)	62, 611, 1030, 1224, 1591
BspQI	GCTCTTC	1 cut(s)	603
BspT104I	TTCGAA	1 cut(s)	1488
BspT107I	GGYRCC	1 cut(s)	82
BspTNI	GGTCTC	2 cut(s)	680, 941
BsrDI	GCAATG	3 cut(s)	684, 1173, 1731
BsrGI	TGTACA	1 cut(s)	1452
BsrI	ACTGG	8 cut(s)	815, 880, 983, 1102, 1249, 1304, 1568, 2251
BssECI	CCNNGG	6 cut(s)	72, 628, 1154, 1518, 1519, 2028
BssMI	GATC	9 cut(s)	67, 600, 616, 1013, 1035, 1216, 1261, 1474, 1596
BssNAI	GTATAC	1 cut(s)	1103
BssNI	GRCGYC	2 cut(s)	1923, 2166
BssT1I	CCWWGG	3 cut(s)	72, 1154, 2028
Bst1107I	GTATAC	1 cut(s)	1103
Bst2UI	CCWGG	2 cut(s)	1236, 1428
Bst4CI	ACNGT	8 cut(s)	351, 494, 1006, 1410, 1754, 1822, 2013, 2177
Bst6I	CTCTTC	1 cut(s)	603
BstACI	GRCGYC	2 cut(s)	1923, 2166
BstAPI	GCANNNNNTGC	2 cut(s)	590, 2015
BstAUI	TGTACA	1 cut(s)	1452
BstBI	TTCGAA	1 cut(s)	1488
BstC8I	GCNNGC	2 cut(s)	343, 579
BstDSI	CCRYGG	2 cut(s)	72, 2028
BstF5I	GGATG	5 cut(s)	1293, 1495, 1545, 1936, 2237
BstH2I	RGCGCY	1 cut(s)	253
BstHHI	GCGC	1 cut(s)	252
BstKTI	GATC	9 cut(s)	70, 603, 619, 1016, 1038, 1219, 1264, 1477, 1599
BstMAI	GTCTC	6 cut(s)	680, 941, 1369, 1554, 2077, 2160
BstMBI	GATC	9 cut(s)	67, 600, 616, 1013, 1035, 1216, 1261, 1474, 1596
BstMWI	GCNNNNNNNGC	2 cut(s)	590, 2015
BstNI	CCWGG	2 cut(s)	1236, 1428
BstNSI	RCATGY	3 cut(s)	481, 1459, 2051
BstPAI	GACNNNNGTC	1 cut(s)	1988
BstSCI	CCNGG	6 cut(s)	455, 1178, 1234, 1426, 1518, 1519
BstSFI	CTRYAG	3 cut(s)	1569, 1762, 2139
BstV1I	GCAGC	5 cut(s)	593, 605, 1213, 2125, 2153
BstV2I	GAAGAC	4 cut(s)	435, 450, 1283, 2161
BstX2I	RGATCY	2 cut(s)	1216, 1596
BstXI	CCANNNNNNTGG	1 cut(s)	42
BstYI	RGATCY	2 cut(s)	1216, 1596
BstZ17I	GTATAC	1 cut(s)	1103
BsuRI	GGCC	4 cut(s)	345, 858, 1780, 1871
BtgI	CCRYGG	2 cut(s)	72, 2028
BtsCI	GGATG	5 cut(s)	1293, 1495, 1545, 1936, 2237
BtsI	GCAGTG	3 cut(s)	105, 136, 1804
BtsIMutI	CAGTG	5 cut(s)	105, 136, 1406, 1804, 2189
BveI	ACCTGC	1 cut(s)	311
Cac8I	GCNNGC	2 cut(s)	343, 579
CaiI	CAGNNNCTG	1 cut(s)	2041
CfoI	GCGC	1 cut(s)	252
Cfr13I	GGNCC	6 cut(s)	31, 120, 300, 856, 1643, 1869
Cfr9I	CCCGGG	1 cut(s)	1519
CseI	GACGC	3 cut(s)	1912, 1978, 2155
Csp6I	GTAC	6 cut(s)	883, 1270, 1411, 1438, 1453, 2033
CviQI	GTAC	6 cut(s)	883, 1270, 1411, 1438, 1453, 2033
DpnI	GATC	9 cut(s)	69, 602, 618, 1015, 1037, 1218, 1263, 1476, 1598
DpnII	GATC	9 cut(s)	67, 600, 616, 1013, 1035, 1216, 1261, 1474, 1596
DraI	TTTAAA	2 cut(s)	90, 1918
Eam1104I	CTCTTC	1 cut(s)	603
EarI	CTCTTC	1 cut(s)	603
Ecl136II	GAGCTC	3 cut(s)	1553, 1576, 2212
Eco130I	CCWWGG	3 cut(s)	72, 1154, 2028
Eco147I	AGGCCT	1 cut(s)	1780
Eco24I	GRGCYC	4 cut(s)	1555, 1578, 1657, 2214
Eco31I	GGTCTC	2 cut(s)	680, 941
Eco32I	GATATC	1 cut(s)	1622
Eco47I	GGWCC	4 cut(s)	31, 120, 300, 1643
Eco47III	AGCGCT	1 cut(s)	251
Eco53kI	GAGCTC	3 cut(s)	1553, 1576, 2212
Eco57I	CTGAAG	1 cut(s)	446
Eco88I	CYCGRG	1 cut(s)	1519
EcoICRI	GAGCTC	3 cut(s)	1553, 1576, 2212
EcoO109I	RGGNCCY	4 cut(s)	31, 300, 1643, 1869
EcoRI	GAATTC	1 cut(s)	410
EcoRII	CCWGG	2 cut(s)	1234, 1426
EcoRV	GATATC	1 cut(s)	1622
EcoT14I	CCWWGG	3 cut(s)	72, 1154, 2028
EcoT22I	ATGCAT	3 cut(s)	232, 361, 1119
EcoT38I	GRGCYC	4 cut(s)	1555, 1578, 1657, 2214
ErhI	CCWWGG	3 cut(s)	72, 1154, 2028
Esp3I	CGTCTC	2 cut(s)	2077, 2160
FalI	AAGNNNNNCTT	4 cut(s)	444, 476, 1631, 1663
FaqI	GGGAC	4 cut(s)	302, 313, 1108, 1656
FauNDI	CATATG	2 cut(s)	589, 1613
FbaI	TGATCA	2 cut(s)	600, 1261
FblI	GTMKAC	1 cut(s)	1102
Fnu4HI	GCNGC	5 cut(s)	582, 594, 1202, 2139, 2142
FokI	GGATG	5 cut(s)	1300, 1482, 1532, 1943, 2224
FriOI	GRGCYC	4 cut(s)	1555, 1578, 1657, 2214
Fsp4HI	GCNGC	5 cut(s)	582, 594, 1202, 2139, 2142
FspBI	CTAG	3 cut(s)	402, 2219, 2272
GlaI	GCGC	1 cut(s)	251
GluI	GCNGC	5 cut(s)	582, 594, 1202, 2139, 2142
GsuI	CTGGAG	4 cut(s)	832, 1218, 1410, 1845
HaeII	RGCGCY	1 cut(s)	253
HaeIII	GGCC	4 cut(s)	345, 858, 1780, 1871
HapII	CCGG	3 cut(s)	457, 1179, 1520
HgaI	GACGC	3 cut(s)	1912, 1978, 2155
HhaI	GCGC	1 cut(s)	252
Hin1I	GRCGYC	2 cut(s)	1923, 2166
Hin6I	GCGC	1 cut(s)	250
HinP1I	GCGC	1 cut(s)	250
HincII	GTYRAC	1 cut(s)	1887
HindII	GTYRAC	1 cut(s)	1887
HindIII	AAGCTT	1 cut(s)	1810
HpaI	GTTAAC	1 cut(s)	1887
HpaII	CCGG	3 cut(s)	457, 1179, 1520
HphI	GGTGA	2 cut(s)	506, 1495
Hpy166II	GTNNAC	5 cut(s)	320, 850, 1103, 1543, 1887
Hpy188III	TCNNGA	8 cut(s)	136, 620, 1093, 1346, 1472, 1862, 2103, 2157
Hpy8I	GTNNAC	5 cut(s)	320, 850, 1103, 1543, 1887
HpyAV	CCTTC	5 cut(s)	14, 174, 211, 325, 1994
HpyCH4III	ACNGT	8 cut(s)	351, 494, 1006, 1410, 1754, 1822, 2013, 2177
HpyCH4IV	ACGT	3 cut(s)	796, 852, 1327
HpyF10VI	GCNNNNNNNGC	2 cut(s)	590, 2015
HpySE526I	ACGT	3 cut(s)	796, 852, 1327
Hsp92I	GRCGYC	2 cut(s)	1923, 2166
HspAI	GCGC	1 cut(s)	250
KflI	GGGWCCC	1 cut(s)	1643
Ksp22I	TGATCA	2 cut(s)	600, 1261
KspAI	GTTAAC	1 cut(s)	1887
Kzo9I	GATC	9 cut(s)	67, 600, 616, 1013, 1035, 1216, 1261, 1474, 1596
LguI	GCTCTTC	1 cut(s)	603
LmnI	GCTCC	4 cut(s)	189, 1652, 1712, 2209
Lsp1109I	GCAGC	5 cut(s)	593, 605, 1213, 2125, 2153
LweI	GCATC	7 cut(s)	217, 346, 593, 908, 1126, 1504, 1996
MaeI	CTAG	3 cut(s)	402, 2219, 2272
MaeII	ACGT	3 cut(s)	796, 852, 1327
MaeIII	GTNAC	7 cut(s)	482, 494, 520, 1028, 1208, 1222, 1333
MalI	GATC	9 cut(s)	69, 602, 618, 1015, 1037, 1218, 1263, 1476, 1598
MboI	GATC	9 cut(s)	67, 600, 616, 1013, 1035, 1216, 1261, 1474, 1596
MflI	RGATCY	2 cut(s)	1216, 1596
MhlI	GDGCHC	4 cut(s)	1555, 1578, 1657, 2214
MlyI	GAGTC	3 cut(s)	440, 1793, 1852
MmeI	TCCRAC	3 cut(s)	489, 2063, 2210
Mph1103I	ATGCAT	3 cut(s)	232, 361, 1119
MslI	CAYNNNNRTG	3 cut(s)	40, 311, 1797
MspI	CCGG	3 cut(s)	457, 1179, 1520
MspR9I	CCNGG	6 cut(s)	457, 1180, 1236, 1428, 1520, 1521
MvaI	CCWGG	2 cut(s)	1236, 1428
MwoI	GCNNNNNNNGC	2 cut(s)	590, 2015
NciI	CCSGG	4 cut(s)	457, 1180, 1520, 1521
NcoI	CCATGG	2 cut(s)	72, 2028
NdeI	CATATG	2 cut(s)	589, 1613
NdeII	GATC	9 cut(s)	67, 600, 616, 1013, 1035, 1216, 1261, 1474, 1596
NlaIV	GGNNCC	8 cut(s)	33, 84, 191, 301, 1644, 1645, 1654, 1903
NmeAIII	GCCGAG	1 cut(s)	1966
NmuCI	GTSAC	4 cut(s)	482, 494, 520, 1333
NsiI	ATGCAT	3 cut(s)	232, 361, 1119
NspI	RCATGY	3 cut(s)	481, 1459, 2051
NspV	TTCGAA	1 cut(s)	1488
PceI	AGGCCT	1 cut(s)	1780
PciI	ACATGT	2 cut(s)	477, 1455
PciSI	GCTCTTC	1 cut(s)	603
PfeI	GAWTC	7 cut(s)	221, 326, 742, 760, 1110, 1431, 2247
PfoI	TCCNGGA	1 cut(s)	1426
PkrI	GCNGC	5 cut(s)	583, 595, 1203, 2140, 2143
PleI	GAGTC	3 cut(s)	440, 1792, 1852
PpsI	GAGTC	3 cut(s)	440, 1792, 1852
PpuMI	RGGWCCY	3 cut(s)	31, 300, 1643
PscI	ACATGT	2 cut(s)	477, 1455
PshAI	GACNNNNGTC	1 cut(s)	1988
Psp124BI	GAGCTC	3 cut(s)	1555, 1578, 2214
Psp1406I	AACGTT	1 cut(s)	1327
Psp5II	RGGWCCY	3 cut(s)	31, 300, 1643
Psp6I	CCWGG	2 cut(s)	1234, 1426
PspGI	CCWGG	2 cut(s)	1234, 1426
PspN4I	GGNNCC	8 cut(s)	33, 84, 191, 301, 1644, 1645, 1654, 1903
PspPI	GGNCC	6 cut(s)	31, 120, 300, 856, 1643, 1869
PspPPI	RGGWCCY	3 cut(s)	31, 300, 1643
PstI	CTGCAG	1 cut(s)	2143
PstNI	CAGNNNCTG	1 cut(s)	2041
PsuI	RGATCY	2 cut(s)	1216, 1596
RsaI	GTAC	6 cut(s)	884, 1271, 1412, 1439, 1454, 2034
RsaNI	GTAC	6 cut(s)	883, 1270, 1411, 1438, 1453, 2033
RseI	CAYNNNNRTG	3 cut(s)	40, 311, 1797
SacI	GAGCTC	3 cut(s)	1555, 1578, 2214
SapI	GCTCTTC	1 cut(s)	603
SatI	GCNGC	5 cut(s)	582, 594, 1202, 2139, 2142
Sau3AI	GATC	9 cut(s)	67, 600, 616, 1013, 1035, 1216, 1261, 1474, 1596
Sau96I	GGNCC	6 cut(s)	31, 120, 300, 856, 1643, 1869
SchI	GAGTC	3 cut(s)	440, 1793, 1852
ScrFI	CCNGG	6 cut(s)	457, 1180, 1236, 1428, 1520, 1521
SduI	GDGCHC	4 cut(s)	1555, 1578, 1657, 2214
SfaNI	GCATC	7 cut(s)	217, 346, 593, 908, 1126, 1504, 1996
SfcI	CTRYAG	3 cut(s)	1569, 1762, 2139
SfuI	TTCGAA	1 cut(s)	1488
SinI	GGWCC	4 cut(s)	31, 120, 300, 1643
SmaI	CCCGGG	1 cut(s)	1521
SmiMI	CAYNNNNRTG	3 cut(s)	40, 311, 1797
SmlI	CTYRAG	4 cut(s)	953, 1414, 1463, 1534
SmoI	CTYRAG	4 cut(s)	953, 1414, 1463, 1534
SpeI	ACTAGT	1 cut(s)	401
SseBI	AGGCCT	1 cut(s)	1780
SsiI	CCGC	1 cut(s)	877
SspI	AATATT	1 cut(s)	1352
SspMI	CTAG	3 cut(s)	402, 2219, 2272
SstI	GAGCTC	3 cut(s)	1555, 1578, 2214
StuI	AGGCCT	1 cut(s)	1780
StyD4I	CCNGG	6 cut(s)	455, 1178, 1234, 1426, 1518, 1519
StyI	CCWWGG	3 cut(s)	72, 1154, 2028
TaaI	ACNGT	8 cut(s)	351, 494, 1006, 1410, 1754, 1822, 2013, 2177
TaiI	ACGT	3 cut(s)	799, 855, 1330
TaqI	TCGA	6 cut(s)	60, 329, 916, 1488, 2064, 2158
TaqII	GACCGA	1 cut(s)	704
TatI	WGTACW	2 cut(s)	1410, 1452
TfiI	GAWTC	7 cut(s)	221, 326, 742, 760, 1110, 1431, 2247
TscAI	CASTG	5 cut(s)	112, 136, 1413, 1804, 2196
TseFI	GTSAC	4 cut(s)	482, 494, 520, 1333
TseI	GCWGC	5 cut(s)	581, 593, 1201, 2138, 2141
Tsp45I	GTSAC	4 cut(s)	482, 494, 520, 1333
TspDTI	ATGAA	9 cut(s)	17, 33, 456, 819, 1137, 1593, 1714, 2010, 2226
TspGWI	ACGGA	2 cut(s)	539, 885
TspMI	CCCGGG	1 cut(s)	1519
TspRI	CASTG	5 cut(s)	112, 136, 1413, 1804, 2196
VpaK11BI	GGWCC	4 cut(s)	31, 120, 300, 1643
XapI	RAATTY	6 cut(s)	410, 773, 1483, 2222, 2233, 2266
XceI	RCATGY	3 cut(s)	481, 1459, 2051
XcmI	CCANNNNNNNNNTGG	1 cut(s)	556
XmaI	CCCGGG	1 cut(s)	1519
XmiI	GTMKAC	1 cut(s)	1102
XspI	CTAG	3 cut(s)	402, 2219, 2272
Zsp2I	ATGCAT	3 cut(s)	232, 361, 1119

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.