Rw5G038340

respiratory burst oxidase homolog protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0010309
Physical Location & Seq
Reverse (-)
67599468 .. 67603979
4512 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G038340.1

Sequence Viewer

Length: 2544 bp
ATGAACATCTCAGAAAATGAAGGTAAGGAGGACCCATCAAAATGGGGGCTTCAAAACATCGAAATTGATCCCATGGTTGAGGTGCCTTTAAATCATTCCAATGACACTGCATTGAAAAGGACCAATAGCAGCGTCAGGAGGAGAAATGCGTTTCAGGGAAATGTTCGTGGTGGCATGGGAAGGATTAGGAGCCTACATTTTCTTAATATCAAAGGGAAGGAATCAGATGCTTGGAAGCCTATGGAGAAGCGCTTTAATCAATATGCAGTTGATAATAGGCTCAGTAGGGACAACTTTGGGACCTGCATTGGAATGGGTGGACGAGAATCGAAGGACTTTGCAGGCCAACTGTTTGATGCATTATGTAGGAGGAGGAGGATAAATGTAAACGATGGGATTACTTGTGAAGAATTCAGGTTGTTTTGGGAAGACTTGACTAATGAAGACTCCGAAGCCCGGCTTCAGATATTCTTTGACATGTGTGACAAGAACGGTGACGGGAAGCTGTCGGAGGAGGAGGTGACGGAGGTTATAGTTTTGAGTGCCTCCACGAACAAGTTGGCAAATCTTAAACAGCAAGCAGCATCATATGCAGCTTTGATCATGGAAGAGCTTGATCCTGACCACCTCGGATATATAGAGATGTGGCAGTTAGAAACTCTACTTAGGGAAATGGCAATGGCTGAGACTGAAGTAAAACCAAAACTTTGCAAGAAAACCCAGACTCTCGCAAGAGCCATGATTCCCAGAAGATACAGGAATCCTATGAGCAAATTCGTATCTACTACCACAGAACATGTCCATGAAAACTGGAGGAAAATATGGGTTATTTCGTTGTGGTTAGCAGTAAACGTGGGCCTCTTTGCTTGGAAATACCGCCAGTACCAGAAAAATCCGTTATTCAAAATCATGGGTCGATGCCTCTGCTTTGCAAAGGGTGCTGCTGAGACCCTCAAGTTCAACATGGCTCTCATTCTCATTCCAGTTTGTAGGGGAACTCTTACAGTCCTTAGATCAACATTTTTAAGTAACTTGATCCCTTTTGATGACAATATCAATTTCCATAAGTTGATTGCATTGGGGATAACAATCGGGACTGGTATACATGGAATCGTGCATCTAACTTGCGATTTTCCAAGATTGATTTCATGTCCAAGGGGTCAGTTCTTGGACATTGCCGGGCGTTATTTCAATTCTGTGCAGCCAAGTTACATGGATCTGGTTACAACTACTCCAGGCATAACTGGGATTATCATAATTGTTATAATGGCATTTTCCTTCACTCTCGCACTAAACTCACTCAGGAAAAGTGCCATCAACTTACCGGGGCCTCTCAAGAATTGGATAGGGTTTAATTCCTTCTGGTATTCACACCAAATGCTGGGATTGGCATATATGCTCTTCATCATACACGGTTTTTTCTTAATATTTCAGGATCAATGGTACAAGAAGACGACATGGATGTATGTATCAGTTCCAGTATTATTGTATGCAACTGAACGTTTGGTCACACTTCTTCAAGAATATTCACACCCTGTCTCTGTCATTAAGGCGATAACTTATACAGGAAATGTTCTCGCACTGTACTTGAGCAAACCTCCAGGATTCAAGTACGAAAGTGGAATGTACATGTTTCTCAAGTGTCCTGATCTATCAAATTTCGAATGGCATCCTTTCACCATCACTTCTGCCCCGGGAGATGATTACCTGAGTGTCCACATCCGAGCTCTGGGAGACTGGACTACAGAGCTCAGAAACATCTTCTCTGAGGTCAGCAGTCAGCTTCAATGTACTCAGACTACTAGAAAAGGAACCCTTATTAGAACAGAAACTAGAGTGAAATCAAAAAAGCACGAAGTTGAACGAAACTATGATCATGAACAACCAGTATATCCGAAGATTGTAGTAAAGGGACCCTTTGGAGCCCCTGCTCAGAATTACACCAAGTATGACATCTTATTGCTCATAGGTCTTGGAATTGGAGCAACTCCTTTCATCAGCATCGCAAAAGATATCATAAACCGTATAAGCTATAGATATGGTCAAAGGCCTGAGTCAGCACATGGCAGTGAAGAAAGAAGCTTAGAAACTGTGCTAAGCACCCACCAACTTGAAACGAATACAAGGACTCCAGAAAGGGCCTACTTTTATTGGTTAACAAGGGAACAAGGTTCCTTTGAATGGTTTAAAGGCGTCATGGATGATATTGCAGAGTATGACAACCATCAAGTGATAGAAATGCACACCTACTTGACAAGCGTCTACGAAGAAGGAGATGCACGGTCTGCGCTTATTACCATGGTACAGAAACTGCAACATGCTAAGAATGGGGTCGATGTTGTCTCAGAAAGTCGGATAAGGACACATTTTTCAAGACCTAATTGGAGAAAGGTGTTTTCGGACTTGGCTGCAGCTCATCAATCGTCTCGAATAGGCGTCTTCTACTGTGGAAGTCCAACACTGATTAAAACACTAAAGGAGCTCTGCCTAGAGTTTAGCTTAAATTCATCAACCCGATTCCAGTTCCACAAGGAGAATTTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04013 ko04624 map04013 map04624
Pfam Domains
Protein Families
EF-hand_6 FAD_binding_8 Ferric_reduct NADPH_Ox NAD_binding_6

Protein Analysis

847

Amino Acids

97.21

Weight (kDa)

8.8

Isoelectric Point (pI)

39.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NADPH_Ox PF08414 62 - 149 2.3e-24 Respiratory burst NADPH oxidase
Ferric_reduct PF01794 324 - 468 6.5e-10 Ferric reductase like transmembrane component
FAD_binding_8 PF08022 513 - 644 9.6e-28 FAD-binding domain
NAD_binding_6 PF08030 650 - 829 9.5e-48 Ferric reductase NAD binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1265
Acc36I ACCTGC 1 cut(s) 311
AccB1I GGYRCC 1 cut(s) 82
AccB7I CCANNNNNTGG 1 cut(s) 1381
AccI GTMKAC 2 cut(s) 1102, 2262
AciI CCGC 1 cut(s) 877
AclI AACGTT 1 cut(s) 1501
AclWI GGATC 5 cut(s) 62, 611, 1030, 1224, 1443
AcsI RAATTY 5 cut(s) 410, 773, 1657, 2503, 2536
AcuI CTGAAG 2 cut(s) 446, 711
AcyI GRCGYC 2 cut(s) 2193, 2436
AfaI GTAC 7 cut(s) 884, 1445, 1586, 1613, 1628, 1792, 2304
AfeI AGCGCT 1 cut(s) 251
AfiI CCNNNNNNNGG 4 cut(s) 456, 1381, 1729, 2181
AflIII ACRYGT 3 cut(s) 477, 796, 1629
AjnI CCWGG 2 cut(s) 1234, 1600
AjuI GAANNNNNNNTTGG 2 cut(s) 1129, 1161
Alw21I GWGCWC 3 cut(s) 1729, 1752, 2484
Alw26I GTCTC 6 cut(s) 680, 941, 1543, 1728, 2347, 2430
AlwI GGATC 5 cut(s) 62, 611, 1030, 1224, 1443
AlwNI CAGNNNCTG 1 cut(s) 2311
Ama87I CYCGRG 1 cut(s) 1693
Aor51HI AGCGCT 1 cut(s) 251
AoxI GGCC 5 cut(s) 343, 856, 1328, 2048, 2139
ApeKI GCWGC 7 cut(s) 129, 581, 593, 941, 1201, 2408, 2411
ApoI RAATTY 5 cut(s) 410, 773, 1657, 2503, 2536
AspLEI GCGC 2 cut(s) 252, 2290
AspS9I GGNCC 7 cut(s) 31, 120, 300, 856, 1328, 1913, 2139
AsuC2I CCSGG 5 cut(s) 457, 1180, 1326, 1694, 1695
AsuHPI GGTGA 3 cut(s) 506, 532, 1669
AsuII TTCGAA 1 cut(s) 1662
AvaI CYCGRG 1 cut(s) 1693
AvaII GGWCC 4 cut(s) 31, 120, 300, 1913
BanI GGYRCC 1 cut(s) 82
BanII GRGCYC 4 cut(s) 1729, 1752, 1927, 2484
BbsI GAAGAC 4 cut(s) 435, 450, 1457, 2431
Bbv12I GWGCWC 3 cut(s) 1729, 1752, 2484
BbvI GCAGC 7 cut(s) 141, 593, 605, 928, 1213, 2395, 2423
BccI CCATC 5 cut(s) 43, 386, 1322, 1688, 2232
BcgI CGANNNNNNTGC 2 cut(s) 906, 940
BciT130I CCWGG 2 cut(s) 1236, 1602
BclI TGATCA 2 cut(s) 600, 1873
BcnI CCSGG 5 cut(s) 457, 1180, 1326, 1694, 1695
BcoDI GTCTC 6 cut(s) 680, 941, 1543, 1728, 2347, 2430
BfaI CTAG 4 cut(s) 1803, 1833, 2489, 2542
BfmI CTRYAG 3 cut(s) 1743, 2032, 2409
BfoI RGCGCY 1 cut(s) 253
BfuAI ACCTGC 1 cut(s) 311
BisI GCNGC 7 cut(s) 130, 582, 594, 942, 1202, 2409, 2412
BlpI GCTNAGC 1 cut(s) 2096
BlsI GCNGC 7 cut(s) 131, 583, 595, 943, 1203, 2410, 2413
Bme1390I CCNGG 7 cut(s) 457, 1180, 1236, 1326, 1602, 1694, 1695
Bme18I GGWCC 4 cut(s) 31, 120, 300, 1913
BmeT110I CYCGRG 1 cut(s) 1693
BmgT120I GGNCC 7 cut(s) 31, 120, 300, 856, 1328, 1913, 2139
BmrFI CCNGG 7 cut(s) 457, 1180, 1236, 1326, 1602, 1694, 1695
BmrI ACTGGG 1 cut(s) 1254
BmsI GCATC 8 cut(s) 217, 346, 593, 908, 1126, 1678, 2010, 2266
BmuI ACTGGG 1 cut(s) 1254
BoxI GACNNNNGTC 1 cut(s) 2258
BpiI GAAGAC 4 cut(s) 435, 450, 1457, 2431
BplI GAGNNNNNCTC 2 cut(s) 1582, 1614
BpmI CTGGAG 4 cut(s) 832, 1218, 1584, 2115
Bpu1102I GCTNAGC 1 cut(s) 2096
Bpu14I TTCGAA 1 cut(s) 1662
BpuEI CTTGAG 4 cut(s) 938, 1319, 1609, 1622
BpuMI CCSGG 5 cut(s) 457, 1180, 1326, 1694, 1695
BsaBI GATNNNNATC 1 cut(s) 1088
BsaHI GRCGYC 2 cut(s) 2193, 2436
BsaI GGTCTC 1 cut(s) 941
BsaJI CCNNGG 7 cut(s) 72, 628, 1154, 1325, 1692, 1693, 2298
BsaXI ACNNNNNCTCC 4 cut(s) 1216, 1246, 2113, 2143
Bsc4I CCNNNNNNNGG 4 cut(s) 456, 1381, 1729, 2181
Bse1I ACTGG 9 cut(s) 815, 880, 983, 1102, 1249, 1478, 1742, 1886, 2521
Bse3DI GCAATG 2 cut(s) 684, 1173
Bse8I GATNNNNATC 1 cut(s) 1088
BseBI CCWGG 2 cut(s) 1236, 1602
BseDI CCNNGG 7 cut(s) 72, 628, 1154, 1325, 1692, 1693, 2298
BseGI GGATG 4 cut(s) 1467, 1669, 1719, 2206
BseJI GATNNNNATC 1 cut(s) 1088
BseLI CCNNNNNNNGG 4 cut(s) 456, 1381, 1729, 2181
BseMI GCAATG 2 cut(s) 684, 1173
BseNI ACTGG 9 cut(s) 815, 880, 983, 1102, 1249, 1478, 1742, 1886, 2521
BseRI GAGGAG 5 cut(s) 154, 385, 388, 527, 530
BseXI GCAGC 7 cut(s) 141, 593, 605, 928, 1213, 2395, 2423
BseYI CCCAGC 1 cut(s) 1381
BsgI GTGCAG 1 cut(s) 1220
BshFI GGCC 5 cut(s) 345, 858, 1330, 2050, 2141
BshNI GGYRCC 1 cut(s) 82
BsiHKAI GWGCWC 3 cut(s) 1729, 1752, 2484
BsiHKCI CYCGRG 1 cut(s) 1693
BsiSI CCGG 4 cut(s) 457, 1179, 1325, 1694
BslFI GGGAC 4 cut(s) 302, 313, 1108, 1926
BslI CCNNNNNNNGG 4 cut(s) 456, 1381, 1729, 2181
BsmAI GTCTC 6 cut(s) 680, 941, 1543, 1728, 2347, 2430
BsmBI CGTCTC 1 cut(s) 2430
BsmFI GGGAC 4 cut(s) 302, 313, 1108, 1926
BsnI GGCC 5 cut(s) 345, 858, 1330, 2050, 2141
Bso31I GGTCTC 1 cut(s) 941
BsoBI CYCGRG 1 cut(s) 1693
Bsp119I TTCGAA 1 cut(s) 1662
Bsp1286I GDGCHC 4 cut(s) 1729, 1752, 1927, 2484
Bsp1407I TGTACA 1 cut(s) 1626
Bsp143I GATC 9 cut(s) 67, 600, 616, 1013, 1035, 1216, 1435, 1648, 1873
Bsp1720I GCTNAGC 1 cut(s) 2096
Bsp19I CCATGG 2 cut(s) 72, 2298
BspACI CCGC 1 cut(s) 877
BspANI GGCC 5 cut(s) 345, 858, 1330, 2050, 2141
BspHI TCATGA 1 cut(s) 1876
BspMAI CTGCAG 1 cut(s) 2413
BspMI ACCTGC 1 cut(s) 311
BspPI GGATC 5 cut(s) 62, 611, 1030, 1224, 1443
BspQI GCTCTTC 2 cut(s) 603, 1406
BspT104I TTCGAA 1 cut(s) 1662
BspT107I GGYRCC 1 cut(s) 82
BspTNI GGTCTC 1 cut(s) 941
BsrDI GCAATG 2 cut(s) 684, 1173
BsrGI TGTACA 1 cut(s) 1626
BsrI ACTGG 9 cut(s) 815, 880, 983, 1102, 1249, 1478, 1742, 1886, 2521
BssECI CCNNGG 7 cut(s) 72, 628, 1154, 1325, 1692, 1693, 2298
BssMI GATC 9 cut(s) 67, 600, 616, 1013, 1035, 1216, 1435, 1648, 1873
BssNAI GTATAC 1 cut(s) 1103
BssNI GRCGYC 2 cut(s) 2193, 2436
BssT1I CCWWGG 3 cut(s) 72, 1154, 2298
Bst1107I GTATAC 1 cut(s) 1103
Bst2UI CCWGG 2 cut(s) 1236, 1602
Bst4CI ACNGT 9 cut(s) 351, 494, 1006, 1415, 1584, 2024, 2092, 2283, 2447
Bst6I CTCTTC 2 cut(s) 603, 1406
BstACI GRCGYC 2 cut(s) 2193, 2436
BstAPI GCANNNNNTGC 3 cut(s) 590, 938, 2285
BstAUI TGTACA 1 cut(s) 1626
BstBI TTCGAA 1 cut(s) 1662
BstC8I GCNNGC 2 cut(s) 343, 579
BstDSI CCRYGG 2 cut(s) 72, 2298
BstF5I GGATG 4 cut(s) 1467, 1669, 1719, 2206
BstH2I RGCGCY 1 cut(s) 253
BstHHI GCGC 2 cut(s) 252, 2290
BstKTI GATC 9 cut(s) 70, 603, 619, 1016, 1038, 1219, 1438, 1651, 1876
BstMAI GTCTC 6 cut(s) 680, 941, 1543, 1728, 2347, 2430
BstMBI GATC 9 cut(s) 67, 600, 616, 1013, 1035, 1216, 1435, 1648, 1873
BstMWI GCNNNNNNNGC 3 cut(s) 590, 938, 2285
BstNI CCWGG 2 cut(s) 1236, 1602
BstNSI RCATGY 4 cut(s) 481, 800, 1633, 2321
BstPAI GACNNNNGTC 1 cut(s) 2258
BstSCI CCNGG 7 cut(s) 455, 1178, 1234, 1324, 1600, 1692, 1693
BstSFI CTRYAG 3 cut(s) 1743, 2032, 2409
BstV1I GCAGC 7 cut(s) 141, 593, 605, 928, 1213, 2395, 2423
BstV2I GAAGAC 4 cut(s) 435, 450, 1457, 2431
BstX2I RGATCY 1 cut(s) 1216
BstXI CCANNNNNNTGG 1 cut(s) 42
BstYI RGATCY 1 cut(s) 1216
BstZ17I GTATAC 1 cut(s) 1103
BsuRI GGCC 5 cut(s) 345, 858, 1330, 2050, 2141
BtgI CCRYGG 2 cut(s) 72, 2298
BtgZI GCGATG 1 cut(s) 1987
BtsCI GGATG 4 cut(s) 1467, 1669, 1719, 2206
BtsI GCAGTG 2 cut(s) 105, 2074
BtsIMutI CAGTG 4 cut(s) 105, 1580, 2074, 2459
BveI ACCTGC 1 cut(s) 311
Cac8I GCNNGC 2 cut(s) 343, 579
CaiI CAGNNNCTG 1 cut(s) 2311
CciI TCATGA 1 cut(s) 1876
CfoI GCGC 2 cut(s) 252, 2290
Cfr13I GGNCC 7 cut(s) 31, 120, 300, 856, 1328, 1913, 2139
Cfr9I CCCGGG 1 cut(s) 1693
CseI GACGC 4 cut(s) 121, 2182, 2248, 2425
Csp6I GTAC 7 cut(s) 883, 1444, 1585, 1612, 1627, 1791, 2303
CviQI GTAC 7 cut(s) 883, 1444, 1585, 1612, 1627, 1791, 2303
DpnI GATC 9 cut(s) 69, 602, 618, 1015, 1037, 1218, 1437, 1650, 1875
DpnII GATC 9 cut(s) 67, 600, 616, 1013, 1035, 1216, 1435, 1648, 1873
DraI TTTAAA 2 cut(s) 90, 2188
Eam1104I CTCTTC 2 cut(s) 603, 1406
EarI CTCTTC 2 cut(s) 603, 1406
Ecl136II GAGCTC 3 cut(s) 1727, 1750, 2482
Eco130I CCWWGG 3 cut(s) 72, 1154, 2298
Eco147I AGGCCT 1 cut(s) 2050
Eco24I GRGCYC 4 cut(s) 1729, 1752, 1927, 2484
Eco31I GGTCTC 1 cut(s) 941
Eco32I GATATC 1 cut(s) 2014
Eco47I GGWCC 4 cut(s) 31, 120, 300, 1913
Eco47III AGCGCT 1 cut(s) 251
Eco53kI GAGCTC 3 cut(s) 1727, 1750, 2482
Eco57I CTGAAG 2 cut(s) 446, 711
Eco88I CYCGRG 1 cut(s) 1693
EcoICRI GAGCTC 3 cut(s) 1727, 1750, 2482
EcoO109I RGGNCCY 5 cut(s) 31, 300, 1328, 1913, 2139
EcoRI GAATTC 1 cut(s) 410
EcoRII CCWGG 2 cut(s) 1234, 1600
EcoRV GATATC 1 cut(s) 2014
EcoT14I CCWWGG 3 cut(s) 72, 1154, 2298
EcoT22I ATGCAT 1 cut(s) 361
EcoT38I GRGCYC 4 cut(s) 1729, 1752, 1927, 2484
ErhI CCWWGG 3 cut(s) 72, 1154, 2298
Esp3I CGTCTC 1 cut(s) 2430
FalI AAGNNNNNCTT 6 cut(s) 444, 476, 1800, 1832, 1901, 1933
FaqI GGGAC 4 cut(s) 302, 313, 1108, 1926
FauNDI CATATG 1 cut(s) 589
FbaI TGATCA 2 cut(s) 600, 1873
FblI GTMKAC 2 cut(s) 1102, 2262
Fnu4HI GCNGC 7 cut(s) 130, 582, 594, 942, 1202, 2409, 2412
FokI GGATG 4 cut(s) 1474, 1656, 1706, 2213
FriOI GRGCYC 4 cut(s) 1729, 1752, 1927, 2484
Fsp4HI GCNGC 7 cut(s) 130, 582, 594, 942, 1202, 2409, 2412
FspBI CTAG 4 cut(s) 1803, 1833, 2489, 2542
GlaI GCGC 2 cut(s) 251, 2289
GluI GCNGC 7 cut(s) 130, 582, 594, 942, 1202, 2409, 2412
GsaI CCCAGC 1 cut(s) 1385
GsuI CTGGAG 4 cut(s) 832, 1218, 1584, 2115
HaeII RGCGCY 1 cut(s) 253
HaeIII GGCC 5 cut(s) 345, 858, 1330, 2050, 2141
HapII CCGG 4 cut(s) 457, 1179, 1325, 1694
HgaI GACGC 4 cut(s) 121, 2182, 2248, 2425
HhaI GCGC 2 cut(s) 252, 2290
Hin1I GRCGYC 2 cut(s) 2193, 2436
Hin6I GCGC 2 cut(s) 250, 2288
HinP1I GCGC 2 cut(s) 250, 2288
HincII GTYRAC 1 cut(s) 2157
HindII GTYRAC 1 cut(s) 2157
HindIII AAGCTT 1 cut(s) 2080
HpaI GTTAAC 1 cut(s) 2157
HpaII CCGG 4 cut(s) 457, 1179, 1325, 1694
HphI GGTGA 3 cut(s) 506, 532, 1669
Hpy166II GTNNAC 7 cut(s) 320, 388, 850, 1103, 1717, 2157, 2263
Hpy8I GTNNAC 7 cut(s) 320, 388, 850, 1103, 1717, 2157, 2263
HpyAV CCTTC 7 cut(s) 14, 174, 211, 325, 1288, 1369, 2264
HpyCH4III ACNGT 9 cut(s) 351, 494, 1006, 1415, 1584, 2024, 2092, 2283, 2447
HpyCH4IV ACGT 2 cut(s) 852, 1501
HpyF10VI GCNNNNNNNGC 3 cut(s) 590, 938, 2285
HpySE526I ACGT 2 cut(s) 852, 1501
Hsp92I GRCGYC 2 cut(s) 2193, 2436
HspAI GCGC 2 cut(s) 250, 2288
KflI GGGWCCC 1 cut(s) 1913
Ksp22I TGATCA 2 cut(s) 600, 1873
KspAI GTTAAC 1 cut(s) 2157
Kzo9I GATC 9 cut(s) 67, 600, 616, 1013, 1035, 1216, 1435, 1648, 1873
LguI GCTCTTC 2 cut(s) 603, 1406
LmnI GCTCC 4 cut(s) 189, 1922, 1982, 2479
Lsp1109I GCAGC 7 cut(s) 141, 593, 605, 928, 1213, 2395, 2423
LweI GCATC 8 cut(s) 217, 346, 593, 908, 1126, 1678, 2010, 2266
MaeI CTAG 4 cut(s) 1803, 1833, 2489, 2542
MaeII ACGT 2 cut(s) 852, 1501
MaeIII GTNAC 7 cut(s) 482, 494, 520, 1028, 1208, 1222, 1507
MalI GATC 9 cut(s) 69, 602, 618, 1015, 1037, 1218, 1437, 1650, 1875
MboI GATC 9 cut(s) 67, 600, 616, 1013, 1035, 1216, 1435, 1648, 1873
MflI RGATCY 1 cut(s) 1216
MhlI GDGCHC 4 cut(s) 1729, 1752, 1927, 2484
MlyI GAGTC 4 cut(s) 440, 718, 2063, 2122
MmeI TCCRAC 3 cut(s) 489, 2333, 2480
Mph1103I ATGCAT 1 cut(s) 361
MslI CAYNNNNRTG 5 cut(s) 40, 99, 311, 801, 2067
MspI CCGG 4 cut(s) 457, 1179, 1325, 1694
MspR9I CCNGG 7 cut(s) 457, 1180, 1236, 1326, 1602, 1694, 1695
MvaI CCWGG 2 cut(s) 1236, 1602
MwoI GCNNNNNNNGC 3 cut(s) 590, 938, 2285
NciI CCSGG 5 cut(s) 457, 1180, 1326, 1694, 1695
NcoI CCATGG 2 cut(s) 72, 2298
NdeI CATATG 1 cut(s) 589
NdeII GATC 9 cut(s) 67, 600, 616, 1013, 1035, 1216, 1435, 1648, 1873
NmuCI GTSAC 4 cut(s) 482, 494, 520, 1507
NsiI ATGCAT 1 cut(s) 361
NspI RCATGY 4 cut(s) 481, 800, 1633, 2321
NspV TTCGAA 1 cut(s) 1662
PagI TCATGA 1 cut(s) 1876
PceI AGGCCT 1 cut(s) 2050
PciI ACATGT 3 cut(s) 477, 796, 1629
PciSI GCTCTTC 2 cut(s) 603, 1406
PfeI GAWTC 7 cut(s) 221, 326, 742, 760, 1110, 1605, 2517
PflMI CCANNNNNTGG 1 cut(s) 1381
PfoI TCCNGGA 1 cut(s) 1600
PkrI GCNGC 7 cut(s) 131, 583, 595, 943, 1203, 2410, 2413
PleI GAGTC 4 cut(s) 440, 718, 2062, 2122
PpsI GAGTC 4 cut(s) 440, 718, 2062, 2122
PpuMI RGGWCCY 3 cut(s) 31, 300, 1913
PscI ACATGT 3 cut(s) 477, 796, 1629
PshAI GACNNNNGTC 1 cut(s) 2258
PsiI TTATAA 1 cut(s) 1265
Psp124BI GAGCTC 3 cut(s) 1729, 1752, 2484
Psp1406I AACGTT 1 cut(s) 1501
Psp5II RGGWCCY 3 cut(s) 31, 300, 1913
Psp6I CCWGG 2 cut(s) 1234, 1600
PspFI CCCAGC 1 cut(s) 1381
PspGI CCWGG 2 cut(s) 1234, 1600
PspPI GGNCC 7 cut(s) 31, 120, 300, 856, 1328, 1913, 2139
PspPPI RGGWCCY 3 cut(s) 31, 300, 1913
PstI CTGCAG 1 cut(s) 2413
PstNI CAGNNNCTG 1 cut(s) 2311
PsuI RGATCY 1 cut(s) 1216
RsaI GTAC 7 cut(s) 884, 1445, 1586, 1613, 1628, 1792, 2304
RsaNI GTAC 7 cut(s) 883, 1444, 1585, 1612, 1627, 1791, 2303
RseI CAYNNNNRTG 5 cut(s) 40, 99, 311, 801, 2067
SacI GAGCTC 3 cut(s) 1729, 1752, 2484
SapI GCTCTTC 2 cut(s) 603, 1406
SatI GCNGC 7 cut(s) 130, 582, 594, 942, 1202, 2409, 2412
Sau3AI GATC 9 cut(s) 67, 600, 616, 1013, 1035, 1216, 1435, 1648, 1873
Sau96I GGNCC 7 cut(s) 31, 120, 300, 856, 1328, 1913, 2139
SchI GAGTC 4 cut(s) 440, 718, 2063, 2122
ScrFI CCNGG 7 cut(s) 457, 1180, 1236, 1326, 1602, 1694, 1695
SduI GDGCHC 4 cut(s) 1729, 1752, 1927, 2484
SfaNI GCATC 8 cut(s) 217, 346, 593, 908, 1126, 1678, 2010, 2266
SfcI CTRYAG 3 cut(s) 1743, 2032, 2409
SfuI TTCGAA 1 cut(s) 1662
SinI GGWCC 4 cut(s) 31, 120, 300, 1913
SmaI CCCGGG 1 cut(s) 1695
SmiMI CAYNNNNRTG 5 cut(s) 40, 99, 311, 801, 2067
SmlI CTYRAG 4 cut(s) 953, 1334, 1588, 1637
SmoI CTYRAG 4 cut(s) 953, 1334, 1588, 1637
SseBI AGGCCT 1 cut(s) 2050
SsiI CCGC 1 cut(s) 877
SspI AATATT 2 cut(s) 1428, 1526
SspMI CTAG 4 cut(s) 1803, 1833, 2489, 2542
SstI GAGCTC 3 cut(s) 1729, 1752, 2484
StuI AGGCCT 1 cut(s) 2050
StyD4I CCNGG 7 cut(s) 455, 1178, 1234, 1324, 1600, 1692, 1693
StyI CCWWGG 3 cut(s) 72, 1154, 2298
TaaI ACNGT 9 cut(s) 351, 494, 1006, 1415, 1584, 2024, 2092, 2283, 2447
TaiI ACGT 2 cut(s) 855, 1504
TaqI TCGA 6 cut(s) 60, 329, 916, 1662, 2334, 2428
TatI WGTACW 3 cut(s) 1584, 1626, 1790
TfiI GAWTC 7 cut(s) 221, 326, 742, 760, 1110, 1605, 2517
TscAI CASTG 4 cut(s) 112, 1587, 2074, 2466
TseFI GTSAC 4 cut(s) 482, 494, 520, 1507
TseI GCWGC 7 cut(s) 129, 581, 593, 941, 1201, 2408, 2411
Tsp45I GTSAC 4 cut(s) 482, 494, 520, 1507
TspDTI ATGAA 9 cut(s) 17, 33, 456, 819, 1137, 1393, 1893, 1984, 2496
TspGWI ACGGA 2 cut(s) 539, 885
TspMI CCCGGG 1 cut(s) 1693
TspRI CASTG 4 cut(s) 112, 1587, 2074, 2466
Van91I CCANNNNNTGG 1 cut(s) 1381
VpaK11BI GGWCC 4 cut(s) 31, 120, 300, 1913
XapI RAATTY 5 cut(s) 410, 773, 1657, 2503, 2536
XceI RCATGY 4 cut(s) 481, 800, 1633, 2321
XcmI CCANNNNNNNNNTGG 1 cut(s) 556
XmaI CCCGGG 1 cut(s) 1693
XmiI GTMKAC 2 cut(s) 1102, 2262
XspI CTAG 4 cut(s) 1803, 1833, 2489, 2542
Zsp2I ATGCAT 1 cut(s) 361
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.