MD03G1106300.v1.1

respiratory burst oxidase homolog protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
OG0010309
Physical Location & Seq
Forward (+)
9106580 .. 9110548
3969 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1106300.v1.1.491

Sequence Viewer

Length: 2472 bp
ATGTCAAACAATGATGACCAGAAAGACCCCAACAAATGGAAGCTTGAAAGAATTGATGTTGACCCCATGGTGGATATTCCTTTGAGTAACAATGACACAGAAGGCAATGTGACCAAAAGTTCCAACGATGTGACGTTGAAGAGGAACAACAGCAGTGTAAGGAAGAGAAATGGGGTTCAGGGAAACAATCATGCCAGTGTGGGAGGTAGGGCGCCGGTACCAGGAGGGAAAGAAGGGATTAAGAGCTTACGGTTTCTCGATAGGACAGTCACAGGAAAAGAAGGGGAGGCATGGAAGCAGATTGAGAAGCAGTTTAATCAATACGCGGTGGCTGGTAGGCTCTCTAGGGACAAATTTGGAGCCTGCATTGGGATGGGAGGAGAATCGAAGGAATTCGCAGGCGAATTGTTTGATGCATTGGCTAGGAGAAGGATAATTTGCGCGAAAGGTGGGATAACTCTTGAAGAATTGAAGTTGTTTTGGGAAGACATAACTAATGAAGACATGGAAGCAAGACTTCAGATATTCTTCGACATGTGTGACAAGAACGGCGATGGGATGCTCTCCGAGGATGAGGTAGCAGAGGTTATAGTTTTGAGTGCTTCCGCGAACAAGCTGGCAAATCTTAAAAAGCAAGCAAAATCATACGCAGCTTTGATCATGGAAGAGCTTGACCCTGACCACCTCGGATATATAGAGATGTGGCAGTTAGAAACCCTACTGAGGGGAATGGTAGTATCTGAAGATAATAAAAAAATTGGAATGATAACGGAATCTCTCACGAGAGCCATGATTCCCAGAAGATACAGAACTCCCATTAGCAGATTCCTATCTACAACTGCAGAACTTGTGCATGAAAACTGGAAGAAAATATGGATTGTGACATTATGGTTAGCTGTCAACGTAGGCCTCTTTACTTGGAAATACCGCCAATACCAGACCCGCGGATTATACAAACTCATGGGTGAATGCATCTGCATTGCAAAGGGCTGTGCTGAGACTCTCAAGTTCAATATGGCTATCATTCTCATTCCAGTTTGTAGGGGAACACTTACCGCAATTCGATCATCATTTCTCAGCAACCTAATCCCTTTTGATGACAATATCAAATTCCATAAGTTGATTGCACTGGGAATTGTAATTTCGACTTTTATACATGGAGGTTTACACATAACTTGTGATTTCCCAAGATTGGTAACATCCCAGAAAAATGAGTTCATGGATGTTGTCGGGACATATTTCAATTATAAGCAGCCAACTTACATGGACATGATTAACAGTATTCCAGGAATAACCGGGATTCTGATGACGGTTCTAATGATGTTCTCGTTCACGCTAGCATTAAATTCAATGAGAAAAAATGTCAACTTACCGTGGCCACTCAACAATTTGTCAGGGTTCAATTCTTTCTGGTATGCACATCATTTACTTGCGTTGGTGTATATGCTATTCGTCATACATGGTTACTTCCTAGTTTTCGCGAGCGACTGGCACAAGAAGACGGCGGTAACATATACGGGAAATGTTCTGGCTCTGTACATGAGCAAACCTCCTGGATTCAAGTATAAAAGTGGAATGTACCTCTTTCTTAAGTGCCCTGATATATCAGGTTTTGAATGGCATCCCTTCACCATCACTTCTGCCCCAGGAGATGACTACTTGAGCGTCCACATACGAAGCTTGGGAGACTGGACTACAGAGCTTAGAGAAAGATTCGAAAAGGCATGCAGCCAGCTTCAAAGTACACAAACTAGAAGGGGAAGTCTTGTTAGAATAGAAACGAAAGCTCATTCATACCACAGTCATGAAACAGAAGGATATCCGAAGATCGTCATAAAGGGACCATATGGTGCACCGGCTCAAAATTACATAAAGTTTGACATCTTGTTGCTCATAGGTCTGGGAATTGGAGCAACTCCCTTCATCAGCATCTTAAAAGATATCATAAACCAGATAAACCTCAAATTAGCTCTTAATCCTATCTCAATAAATGGGCATCAAGAGACATCTGCGGAAACCAAATCAAACAGCATGCCAACGGAGGCATACAAAAAGGGTCCAGAAAGAGCATACTTTTATTGGGTAACAAGGGAGCAGGCTTCCTTTGAATGGTTTAAAGGTGTCATGGATGACATTGCAGAATGTGATAACAATCATATGATAGAAATGCACAACTACTTGACTAGCGTGTATGAAGAAGGAGACGCGCGGTCTGCTCTCATTGCCATGGTTCAGAAACTGCAACATGCTAAGAATGGAGTTGATGTCGTCTCAGAAAGCCGGATAAGAACTCATTTTGCAAGGCCTAACTGGAGAAGGGTGTTTTCCAACTTGGCTACCGCACATGAATCCTCCCGAATAGGAGTTTTCTATTGTGGAAGTCCAACACTTACCAAAACACTCAGGAAGCTCTGCCTAGAATTTAGTCTAAACTCAGCAACTCGGTTTGTCTTCCACAAGGAGAACTTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04013 ko04624 map04013 map04624
Pfam Domains
Protein Families
EF-hand_6 FAD_binding_8 Ferric_reduct NADPH_Ox NAD_binding_6

Protein Analysis

824

Amino Acids

93.42

Weight (kDa)

8.8

Isoelectric Point (pI)

37.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NADPH_Ox PF08414 77 - 170 1.5e-29 Respiratory burst NADPH oxidase
Ferric_reduct PF01794 340 - 485 5.6e-12 Ferric reductase like transmembrane component
FAD_binding_8 PF08022 499 - 620 9.9e-29 FAD-binding domain
NAD_binding_6 PF08030 626 - 805 2.6e-47 Ferric reductase NAD binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1248
Acc65I GGTACC 1 cut(s) 217
AccB1I GGYRCC 2 cut(s) 211, 217
AccB7I CCANNNNNTGG 1 cut(s) 36
AccII CGCG 7 cut(s) 326, 443, 608, 945, 1481, 2207, 2209
AcoI YGGCCR 1 cut(s) 1376
AcsI RAATTY 5 cut(s) 353, 392, 1109, 1345, 2420
AcuI CTGAAG 2 cut(s) 503, 762
AcyI GRCGYC 1 cut(s) 212
AfaI GTAC 4 cut(s) 219, 1538, 1580, 1744
AfiI CCNNNNNNNGG 8 cut(s) 36, 70, 221, 369, 723, 724, 1192, 2109
AflII CTTAAG 1 cut(s) 1589
AflIII ACRYGT 1 cut(s) 534
AhdI GACNNNNNGTC 1 cut(s) 2209
AjnI CCWGG 4 cut(s) 220, 1285, 1552, 1645
Alw21I GWGCWC 1 cut(s) 1855
Alw26I GTCTC 5 cut(s) 992, 1680, 1997, 2196, 2275
Alw44I GTGCAC 1 cut(s) 1851
AlwNI CAGNNNCTG 1 cut(s) 2239
AoxI GGCC 3 cut(s) 907, 1376, 2303
ApaLI GTGCAC 1 cut(s) 1851
ApeKI GCWGC 3 cut(s) 650, 1252, 1728
ApoI RAATTY 5 cut(s) 353, 392, 1109, 1345, 2420
Asp700I GAANNNNTTC 1 cut(s) 392
Asp718I GGTACC 1 cut(s) 217
AspLEI GCGC 3 cut(s) 214, 443, 2209
AspS9I GGNCC 2 cut(s) 1841, 2057
AsuC2I CCSGG 1 cut(s) 1297
AsuHPI GGTGA 2 cut(s) 977, 1621
AsuII TTCGAA 1 cut(s) 1716
AsuNHI GCTAGC 1 cut(s) 1336
AvaII GGWCC 2 cut(s) 1841, 2057
BaeGI GKGCMC 2 cut(s) 1598, 1855
BalI TGGCCA 1 cut(s) 1378
BanI GGYRCC 2 cut(s) 211, 217
BauI CACGAG 1 cut(s) 781
BbsI GAAGAC 4 cut(s) 492, 507, 1505, 2443
Bbv12I GWGCWC 1 cut(s) 1855
BbvI GCAGC 3 cut(s) 662, 1264, 1740
BccI CCATC 3 cut(s) 367, 548, 1640
BceAI ACGGC 2 cut(s) 565, 1518
BciT130I CCWGG 4 cut(s) 222, 1287, 1554, 1647
BclI TGATCA 1 cut(s) 657
BcnI CCSGG 1 cut(s) 1297
BcoDI GTCTC 5 cut(s) 992, 1680, 1997, 2196, 2275
BfaI CTAG 8 cut(s) 345, 423, 1337, 1472, 1752, 2184, 2417, 2470
BfmI CTRYAG 2 cut(s) 840, 1695
BfoI RGCGCY 1 cut(s) 215
BfrI CTTAAG 1 cut(s) 1589
BisI GCNGC 3 cut(s) 651, 1253, 1729
BlsI GCNGC 3 cut(s) 652, 1254, 1730
Bme1390I CCNGG 5 cut(s) 222, 1287, 1297, 1554, 1647
Bme18I GGWCC 2 cut(s) 1841, 2057
BmeRI GACNNNNNGTC 1 cut(s) 2209
BmgT120I GGNCC 2 cut(s) 1841, 2057
BmiI GGNNCC 5 cut(s) 213, 219, 361, 1842, 2058
BmrFI CCNGG 5 cut(s) 222, 1287, 1297, 1554, 1647
BmrI ACTGGG 1 cut(s) 1139
BmsI GCATC 6 cut(s) 403, 549, 981, 1630, 1938, 2005
BmtI GCTAGC 1 cut(s) 1340
BmuI ACTGGG 1 cut(s) 1139
BpiI GAAGAC 4 cut(s) 492, 507, 1505, 2443
BplI GAGNNNNNCTC 2 cut(s) 1534, 1566
BpmI CTGGAG 1 cut(s) 2332
Bpu14I TTCGAA 1 cut(s) 1716
BpuEI CTTGAG 2 cut(s) 989, 1681
BpuMI CCSGG 1 cut(s) 1297
BsaBI GATNNNNATC 2 cut(s) 829, 2151
BsaHI GRCGYC 1 cut(s) 212
BsaJI CCNNGG 7 cut(s) 66, 567, 685, 943, 1373, 1645, 2226
BsaXI ACNNNNNCTCC 2 cut(s) 2250, 2280
Bsc4I CCNNNNNNNGG 8 cut(s) 36, 70, 221, 369, 723, 724, 1192, 2109
Bse118I RCCGGY 2 cut(s) 214, 1855
Bse1I ACTGG 7 cut(s) 195, 866, 1034, 1134, 1493, 1694, 2315
Bse3DI GCAATG 4 cut(s) 112, 978, 2133, 2220
Bse8I GATNNNNATC 2 cut(s) 829, 2151
BseBI CCWGG 4 cut(s) 222, 1287, 1554, 1647
BseDI CCNNGG 7 cut(s) 66, 567, 685, 943, 1373, 1645, 2226
BseGI GGATG 7 cut(s) 378, 564, 577, 1199, 1228, 1621, 2134
BseJI GATNNNNATC 2 cut(s) 829, 2151
BseLI CCNNNNNNNGG 8 cut(s) 36, 70, 221, 369, 723, 724, 1192, 2109
BseMI GCAATG 4 cut(s) 112, 978, 2133, 2220
BseMII CTCAG 6 cut(s) 713, 987, 1090, 2286, 2416, 2448
BseNI ACTGG 7 cut(s) 195, 866, 1034, 1134, 1493, 1694, 2315
BseRI GAGGAG 1 cut(s) 393
BseSI GKGCMC 2 cut(s) 1598, 1855
BseXI GCAGC 3 cut(s) 662, 1264, 1740
Bsh1236I CGCG 7 cut(s) 326, 443, 608, 945, 1481, 2207, 2209
BshFI GGCC 3 cut(s) 909, 1378, 2305
BshNI GGYRCC 2 cut(s) 211, 217
BsiHKAI GWGCWC 1 cut(s) 1855
BsiSI CCGG 4 cut(s) 215, 1296, 1856, 2281
BslFI GGGAC 3 cut(s) 362, 1246, 1854
BslI CCNNNNNNNGG 8 cut(s) 36, 70, 221, 369, 723, 724, 1192, 2109
BsmAI GTCTC 5 cut(s) 992, 1680, 1997, 2196, 2275
BsmBI CGTCTC 2 cut(s) 2196, 2275
BsmFI GGGAC 3 cut(s) 362, 1246, 1854
BsmI GAATGC 1 cut(s) 974
BsnI GGCC 3 cut(s) 909, 1378, 2305
Bsp119I TTCGAA 1 cut(s) 1716
Bsp1286I GDGCHC 2 cut(s) 1598, 1855
Bsp1407I TGTACA 1 cut(s) 1536
Bsp143I GATC 3 cut(s) 657, 1064, 1827
Bsp19I CCATGG 2 cut(s) 66, 2226
Bsp68I TCGCGA 1 cut(s) 1481
BspANI GGCC 3 cut(s) 909, 1378, 2305
BspCNI CTCAG 6 cut(s) 714, 988, 1089, 2285, 2415, 2447
BspFNI CGCG 7 cut(s) 326, 443, 608, 945, 1481, 2207, 2209
BspHI TCATGA 1 cut(s) 1804
BspLI GGNNCC 5 cut(s) 213, 219, 361, 1842, 2058
BspMAI CTGCAG 1 cut(s) 844
BspOI GCTAGC 1 cut(s) 1340
BspQI GCTCTTC 1 cut(s) 660
BspT104I TTCGAA 1 cut(s) 1716
BspT107I GGYRCC 2 cut(s) 211, 217
BspTI CTTAAG 1 cut(s) 1589
BsrDI GCAATG 4 cut(s) 112, 978, 2133, 2220
BsrFI RCCGGY 2 cut(s) 214, 1855
BsrGI TGTACA 1 cut(s) 1536
BsrI ACTGG 7 cut(s) 195, 866, 1034, 1134, 1493, 1694, 2315
BssAI RCCGGY 2 cut(s) 214, 1855
BssECI CCNNGG 7 cut(s) 66, 567, 685, 943, 1373, 1645, 2226
BssMI GATC 3 cut(s) 657, 1064, 1827
BssNI GRCGYC 1 cut(s) 212
BssSI CACGAG 1 cut(s) 781
BssT1I CCWWGG 2 cut(s) 66, 2226
Bst2BI CACGAG 1 cut(s) 781
Bst2UI CCWGG 4 cut(s) 222, 1287, 1554, 1647
Bst4CI ACNGT 6 cut(s) 252, 268, 1280, 1312, 1374, 1802
Bst6I CTCTTC 3 cut(s) 134, 158, 660
BstACI GRCGYC 1 cut(s) 212
BstAFI CTTAAG 1 cut(s) 1589
BstAUI TGTACA 1 cut(s) 1536
BstBI TTCGAA 1 cut(s) 1716
BstDEI CTNAG 8 cut(s) 722, 996, 1076, 1703, 2250, 2272, 2402, 2434
BstDSI CCRYGG 4 cut(s) 66, 943, 1373, 2226
BstF5I GGATG 7 cut(s) 378, 564, 577, 1199, 1228, 1621, 2134
BstFNI CGCG 7 cut(s) 326, 443, 608, 945, 1481, 2207, 2209
BstH2I RGCGCY 1 cut(s) 215
BstHHI GCGC 3 cut(s) 214, 443, 2209
BstKTI GATC 3 cut(s) 660, 1067, 1830
BstMAI GTCTC 5 cut(s) 992, 1680, 1997, 2196, 2275
BstMBI GATC 3 cut(s) 657, 1064, 1827
BstMWI GCNNNNNNNGC 2 cut(s) 2213, 2222
BstNI CCWGG 4 cut(s) 222, 1287, 1554, 1647
BstNSI RCATGY 4 cut(s) 538, 1728, 2035, 2249
BstSCI CCNGG 5 cut(s) 220, 1285, 1295, 1552, 1645
BstSFI CTRYAG 2 cut(s) 840, 1695
BstSLI GKGCMC 2 cut(s) 1598, 1855
BstUI CGCG 7 cut(s) 326, 443, 608, 945, 1481, 2207, 2209
BstV1I GCAGC 3 cut(s) 662, 1264, 1740
BstV2I GAAGAC 4 cut(s) 492, 507, 1505, 2443
BsuRI GGCC 3 cut(s) 909, 1378, 2305
BtgI CCRYGG 4 cut(s) 66, 943, 1373, 2226
BtgZI GCGATG 1 cut(s) 567
BtsCI GGATG 7 cut(s) 378, 564, 577, 1199, 1228, 1621, 2134
BtsI GCAGTG 1 cut(s) 160
BtsIMutI CAGTG 3 cut(s) 160, 202, 1127
BtuMI TCGCGA 1 cut(s) 1481
CaiI CAGNNNCTG 1 cut(s) 2239
CciI TCATGA 1 cut(s) 1804
CfoI GCGC 3 cut(s) 214, 443, 2209
Cfr10I RCCGGY 2 cut(s) 214, 1855
Cfr13I GGNCC 2 cut(s) 1841, 2057
Cfr42I CCGCGG 1 cut(s) 946
CseI GACGC 2 cut(s) 1654, 2213
Csp6I GTAC 4 cut(s) 218, 1537, 1579, 1743
CviQI GTAC 4 cut(s) 218, 1537, 1579, 1743
DdeI CTNAG 8 cut(s) 722, 996, 1076, 1703, 2250, 2272, 2402, 2434
DinI GGCGCC 1 cut(s) 213
DpnI GATC 3 cut(s) 659, 1066, 1829
DpnII GATC 3 cut(s) 657, 1064, 1827
DraI TTTAAA 1 cut(s) 2116
DriI GACNNNNNGTC 1 cut(s) 2209
EaeI YGGCCR 1 cut(s) 1376
Eam1104I CTCTTC 3 cut(s) 134, 158, 660
Eam1105I GACNNNNNGTC 1 cut(s) 2209
EarI CTCTTC 3 cut(s) 134, 158, 660
Eco130I CCWWGG 2 cut(s) 66, 2226
Eco147I AGGCCT 2 cut(s) 909, 2305
Eco32I GATATC 2 cut(s) 1820, 1942
Eco47I GGWCC 2 cut(s) 1841, 2057
Eco57I CTGAAG 2 cut(s) 503, 762
EcoRI GAATTC 1 cut(s) 392
EcoRII CCWGG 4 cut(s) 220, 1285, 1552, 1645
EcoRV GATATC 2 cut(s) 1820, 1942
EcoT14I CCWWGG 2 cut(s) 66, 2226
EcoT22I ATGCAT 2 cut(s) 418, 974
EgeI GGCGCC 1 cut(s) 213
EheI GGCGCC 1 cut(s) 213
ErhI CCWWGG 2 cut(s) 66, 2226
Esp3I CGTCTC 2 cut(s) 2196, 2275
FalI AAGNNNNNCTT 3 cut(s) 501, 533, 2450
FaqI GGGAC 3 cut(s) 362, 1246, 1854
FauI CCCGC 1 cut(s) 950
FauNDI CATATG 2 cut(s) 1846, 2157
FbaI TGATCA 1 cut(s) 657
Fnu4HI GCNGC 3 cut(s) 651, 1253, 1729
FokI GGATG 7 cut(s) 385, 571, 584, 1186, 1235, 1608, 2141
Fsp4HI GCNGC 3 cut(s) 651, 1253, 1729
FspBI CTAG 8 cut(s) 345, 423, 1337, 1472, 1752, 2184, 2417, 2470
GlaI GCGC 3 cut(s) 213, 442, 2208
GluI GCNGC 3 cut(s) 651, 1253, 1729
GsuI CTGGAG 1 cut(s) 2332
HaeII RGCGCY 1 cut(s) 215
HaeIII GGCC 3 cut(s) 909, 1378, 2305
HapII CCGG 4 cut(s) 215, 1296, 1856, 2281
HgaI GACGC 2 cut(s) 1654, 2213
HhaI GCGC 3 cut(s) 214, 443, 2209
Hin1I GRCGYC 1 cut(s) 212
Hin6I GCGC 3 cut(s) 212, 441, 2207
HinP1I GCGC 3 cut(s) 212, 441, 2207
HincII GTYRAC 3 cut(s) 61, 901, 1366
HindII GTYRAC 3 cut(s) 61, 901, 1366
HindIII AAGCTT 2 cut(s) 41, 1678
HinfI GANTC 9 cut(s) 383, 773, 793, 825, 1000, 1300, 1557, 1713, 2348
HpaII CCGG 4 cut(s) 215, 1296, 1856, 2281
HphI GGTGA 2 cut(s) 977, 1621
Hpy166II GTNNAC 8 cut(s) 61, 901, 1166, 1332, 1366, 1669, 1745, 1853
Hpy188I TCNGA 8 cut(s) 522, 568, 689, 742, 1305, 1824, 2235, 2275
Hpy8I GTNNAC 8 cut(s) 61, 901, 1166, 1332, 1366, 1669, 1745, 1853
HpyCH4III ACNGT 6 cut(s) 252, 268, 1280, 1312, 1374, 1802
HpyCH4IV ACGT 2 cut(s) 134, 903
HpyF10VI GCNNNNNNNGC 2 cut(s) 2213, 2222
HpyF3I CTNAG 8 cut(s) 722, 996, 1076, 1703, 2250, 2272, 2402, 2434
HpySE526I ACGT 2 cut(s) 134, 903
Hsp92I GRCGYC 1 cut(s) 212
HspAI GCGC 3 cut(s) 212, 441, 2207
KasI GGCGCC 1 cut(s) 211
KpnI GGTACC 1 cut(s) 221
Ksp22I TGATCA 1 cut(s) 657
KspI CCGCGG 1 cut(s) 946
Kzo9I GATC 3 cut(s) 657, 1064, 1827
LguI GCTCTTC 1 cut(s) 660
LmnI GCTCC 3 cut(s) 359, 1910, 2092
Lsp1109I GCAGC 3 cut(s) 662, 1264, 1740
LweI GCATC 6 cut(s) 403, 549, 981, 1630, 1938, 2005
MaeI CTAG 8 cut(s) 345, 423, 1337, 1472, 1752, 2184, 2417, 2470
MaeII ACGT 2 cut(s) 134, 903
MalI GATC 3 cut(s) 659, 1066, 1829
MboI GATC 3 cut(s) 657, 1064, 1827
MhlI GDGCHC 2 cut(s) 1598, 1855
MlsI TGGCCA 1 cut(s) 1378
MluNI TGGCCA 1 cut(s) 1378
Mly113I GGCGCC 1 cut(s) 212
MlyI GAGTC 1 cut(s) 994
MmeI TCCRAC 3 cut(s) 147, 2352, 2408
Mox20I TGGCCA 1 cut(s) 1378
Mph1103I ATGCAT 2 cut(s) 418, 974
MroXI GAANNNNTTC 1 cut(s) 392
MscI TGGCCA 1 cut(s) 1378
MseI TTAA 9 cut(s) 240, 315, 627, 1275, 1343, 1590, 1934, 1974, 2115
MslI CAYNNNNRTG 5 cut(s) 195, 371, 1268, 1803, 2225
Msp20I TGGCCA 1 cut(s) 1378
MspA1I CMGCKG 1 cut(s) 945
MspCI CTTAAG 1 cut(s) 1589
MspI CCGG 4 cut(s) 215, 1296, 1856, 2281
MspR9I CCNGG 5 cut(s) 222, 1287, 1297, 1554, 1647
Mva1269I GAATGC 1 cut(s) 974
MvaI CCWGG 4 cut(s) 222, 1287, 1554, 1647
MvnI CGCG 7 cut(s) 326, 443, 608, 945, 1481, 2207, 2209
MwoI GCNNNNNNNGC 2 cut(s) 2213, 2222
NarI GGCGCC 1 cut(s) 212
NciI CCSGG 1 cut(s) 1297
NcoI CCATGG 2 cut(s) 66, 2226
NdeI CATATG 2 cut(s) 1846, 2157
NdeII GATC 3 cut(s) 657, 1064, 1827
NheI GCTAGC 1 cut(s) 1336
NlaIV GGNNCC 5 cut(s) 213, 219, 361, 1842, 2058
NmuCI GTSAC 5 cut(s) 109, 130, 268, 539, 880
NruI TCGCGA 1 cut(s) 1481
NsiI ATGCAT 2 cut(s) 418, 974
NspI RCATGY 4 cut(s) 538, 1728, 2035, 2249
NspV TTCGAA 1 cut(s) 1716
PaeI GCATGC 2 cut(s) 1728, 2035
PagI TCATGA 1 cut(s) 1804
PceI AGGCCT 2 cut(s) 909, 2305
PciI ACATGT 1 cut(s) 534
PciSI GCTCTTC 1 cut(s) 660
PctI GAATGC 1 cut(s) 974
PdmI GAANNNNTTC 1 cut(s) 392
PfeI GAWTC 8 cut(s) 383, 773, 793, 825, 1300, 1557, 1713, 2348
PflMI CCANNNNNTGG 1 cut(s) 36
PfoI TCCNGGA 2 cut(s) 1285, 1552
PkrI GCNGC 3 cut(s) 652, 1254, 1730
PleI GAGTC 1 cut(s) 994
PluTI GGCGCC 1 cut(s) 215
PpsI GAGTC 1 cut(s) 994
PscI ACATGT 1 cut(s) 534
PsiI TTATAA 1 cut(s) 1248
Psp6I CCWGG 4 cut(s) 220, 1285, 1552, 1645
PspGI CCWGG 4 cut(s) 220, 1285, 1552, 1645
PspN4I GGNNCC 5 cut(s) 213, 219, 361, 1842, 2058
PspPI GGNCC 2 cut(s) 1841, 2057
PstI CTGCAG 1 cut(s) 844
PstNI CAGNNNCTG 1 cut(s) 2239
RruI TCGCGA 1 cut(s) 1481
RsaI GTAC 4 cut(s) 219, 1538, 1580, 1744
RsaNI GTAC 4 cut(s) 218, 1537, 1579, 1743
RseI CAYNNNNRTG 5 cut(s) 195, 371, 1268, 1803, 2225
SacII CCGCGG 1 cut(s) 946
SapI GCTCTTC 1 cut(s) 660
SaqAI TTAA 9 cut(s) 240, 315, 627, 1275, 1343, 1590, 1934, 1974, 2115
SatI GCNGC 3 cut(s) 651, 1253, 1729
Sau3AI GATC 3 cut(s) 657, 1064, 1827
Sau96I GGNCC 2 cut(s) 1841, 2057
SchI GAGTC 1 cut(s) 994
ScrFI CCNGG 5 cut(s) 222, 1287, 1297, 1554, 1647
SduI GDGCHC 2 cut(s) 1598, 1855
SfaNI GCATC 6 cut(s) 403, 549, 981, 1630, 1938, 2005
SfcI CTRYAG 2 cut(s) 840, 1695
SfoI GGCGCC 1 cut(s) 213
Sfr303I CCGCGG 1 cut(s) 946
SfuI TTCGAA 1 cut(s) 1716
SgrBI CCGCGG 1 cut(s) 946
SinI GGWCC 2 cut(s) 1841, 2057
SmiMI CAYNNNNRTG 5 cut(s) 195, 371, 1268, 1803, 2225
SmlI CTYRAG 3 cut(s) 1004, 1589, 1660
SmoI CTYRAG 3 cut(s) 1004, 1589, 1660
SphI GCATGC 2 cut(s) 1728, 2035
SseBI AGGCCT 2 cut(s) 909, 2305
SspDI GGCGCC 1 cut(s) 211
SspMI CTAG 8 cut(s) 345, 423, 1337, 1472, 1752, 2184, 2417, 2470
StuI AGGCCT 2 cut(s) 909, 2305
StyD4I CCNGG 5 cut(s) 220, 1285, 1295, 1552, 1645
StyI CCWWGG 2 cut(s) 66, 2226
TaaI ACNGT 6 cut(s) 252, 268, 1280, 1312, 1374, 1802
TaiI ACGT 2 cut(s) 137, 906
TaqI TCGA 6 cut(s) 258, 386, 531, 1063, 1145, 1716
TatI WGTACW 2 cut(s) 1536, 1742
TfiI GAWTC 8 cut(s) 383, 773, 793, 825, 1300, 1557, 1713, 2348
Tru1I TTAA 9 cut(s) 240, 315, 627, 1275, 1343, 1590, 1934, 1974, 2115
Tru9I TTAA 9 cut(s) 240, 315, 627, 1275, 1343, 1590, 1934, 1974, 2115
TscAI CASTG 3 cut(s) 160, 202, 1134
TseFI GTSAC 5 cut(s) 109, 130, 268, 539, 880
TseI GCWGC 3 cut(s) 650, 1252, 1728
Tsp45I GTSAC 5 cut(s) 109, 130, 268, 539, 880
TspDTI ATGAA 8 cut(s) 513, 870, 1207, 1782, 1821, 1912, 2208, 2361
TspGWI ACGGA 2 cut(s) 785, 2054
TspRI CASTG 3 cut(s) 160, 202, 1134
Van91I CCANNNNNTGG 1 cut(s) 36
Vha464I CTTAAG 1 cut(s) 1589
VneI GTGCAC 1 cut(s) 1851
VpaK11BI GGWCC 2 cut(s) 1841, 2057
XapI RAATTY 5 cut(s) 353, 392, 1109, 1345, 2420
XceI RCATGY 4 cut(s) 538, 1728, 2035, 2249
XmnI GAANNNNTTC 1 cut(s) 392
XspI CTAG 8 cut(s) 345, 423, 1337, 1472, 1752, 2184, 2417, 2470
Zsp2I ATGCAT 2 cut(s) 418, 974
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.