FvH4_3g34420

respiratory burst oxidase homolog protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0010309
Physical Location & Seq
Reverse (-)
29860620 .. 29865391
4772 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g34420.t1

Sequence Viewer

Length: 2598 bp
ATGAACATCTCAGAAAATGAGGGTAAGGAGGACGTCCCATCAAAAGGGGTCCTTCAAAACATCGATATTGATCCCATGGTTGATGTGCCAAGTAGTTCCAATGAGAATGTATTGACGGGGACCAATAACATTGTAAGGAGGAGAGCTGGATTTCATGGAAATGTTCCTAGTGGCACGGGAAAGGTTGAAGCAAGAGGAGGAGGAGGAGGAGGAGGAGGGCTTAAGGGCCTGCATTTTCTTAATATCAAAGGGAAGGAATCTGAAGCATGGAAGCCTATGGAAAAGCGCTTCCATCAATATGCAGTTGAAGATAGGCTCTCTAGGGACGACTTTGGAACCTGCATTGGAATGGGTGGACGAGAGTCGAAGGAGTTTGCAGGCCAACTGTTTGATGCATTGTGTAGGAGAAGGAAGCTGTGTGCAGCCGATGGGATTACTATTGTTGAATTGAGGCTGTTTTGGGAAGACTTGACTAGTGAAGACACCGAATCCCGGCTTCAGATATTCTTTGACATGTGTGACAAGAATGGTGATGGGAAGCTCTCAGAGGATGAGGTAATGGAGGTTATAATTTTGAGTGCCTCCACGAACAAGTTGGCAAATCTTAAAGATCAAGCAGCAACATATGCAGCTTTGATCATGGAAGAGCTTGACCCTGACCACCTCGGGTATATAGAGATGTGGCAGTTAGAAACTCTACTTAGGGAAATGGTAATGGTTGAGACGGAAGCAAAACCAAAAATTAGCAAGAGAACCCAAACTCTCGCAAAAGCCATGATTCCTAGAAGGTACAGGAATCCTATGAGCAAATTCACATCTACTACCATAGAGCTTGTCTACGAAAACTGGAGGAAAATATGGATTATTGGGTTGTGGCTAGCGGTTAACGTGGGCCTGTTTACTTGGAAATACCGCCAGTACCAGAAAAATTCGTTATACAAAATCATGGGTCGATGCCTCTGCTTTGCAAAGGGTGCTGCTGAGACCCTTAAGTTCAACATGGCTCTCATTCTCATTCCAGTTTGTAGGAGAGGTCTTACAGCCCTTAGATCAACATTTTTAAGTAACTTGATCCCTTTTGATGACAATATCAATTTCCATAAGTTGATTGCATTGGGAATAACAGTTGGGACTGGTATACATGGAATCGTGCATCTAGCCTGCGATTTTCCTAGATTGATTTCATGTCCACATGATCGGTTCATGGACATTGCCGGGCCTTATTTCAAATATAAGCAGCCAAGTTACATGGACTTGGTTAAAAGTATTCCAGGCATAACTGGGATTATCTTTGTTGTTATCATGGCATTTTCCTTCACTCTTGCATTGAACTCACTCCGGAGAAGTATCAACTTACCAGGGCCTCTCAAGAATTGGATAGGGTTTAATACCTTCTGGTATTCACATCAGTTGCTGGCATTGGCATATATACTCTTCATCATACACGGTTTTTTCCTAATATTTCAGGATCTATGGTACAAGAAGACGACATGGATGTATGTATCAGTTCCAGTGTTATTGTATGCAAGTGAACGACTGGTTACAATATTTCGAGAATTTTCACACCCTGTCTGTGTCATTAAGGCGATAACTTACACAGGAAATGTTCTCGCACTGTACATGACCAAACCTCCCGGATTCAAGTACGAAAGTGGAATGTACCTCTTTCTCAAGTGTCCTGATCTGTCAAATTTCGAATGGCATCCCTTCAGCATCACTTCTGCCCCAGGAGATGAATACTTGAGTGTCCACATCAGAGCTCTGGGAGACTGGACTACAGAGCTCAGAAACATCTTTTCTAAGGTCAGCAGTCAGGTTCAAACTACACAGACTACTAGAAAGGGATCTCTGGTTAGAATAGAAACTAGAGTGAGACCGAAAACCTATGATCCTGTAGAAGACTTCGATAAATTAGAAGAATTCGATCCTAAACAACCAGTATATCCGAGGATTGTATTAAAGGGACCCTTTGGAGCCCCTGCTCAGAATTACACCAAGTATGACATCTTATTGCTCATAGGTCTTGGAATTGGAGCAACTCCTTTCATCAGCGTCGCAAAGGATATCATAAACCATATAAGCAAAAAATACGCTGAAGGGCCTGAGTCAGGAGGTCATGTTCGACGAAGAAGCTCCTTAGGAAAGTTGCTAAGCGGCGACCATGTTGAAGTGAACACAAAGACTCCAGAAAGAGCATACTTTTACTGGTTAACAAGGGAACAAGGTTCATTTGAATGGTTTAAAGGCGTCATGGATGATATTGCAGAATGTGACCAGCATCGAGTAATAGAAATGCATACCTACTTGACAAGCGTCTACGAAGAAGGAGATGCACGGTCTGCGCTTATTACCATGGTACAGAGACTGCAACACGCTAAGAATGGGGTTGATGTTGTCTCACAAAGCCGGATAAGAACACATTTTTCAAGACCTAATTGGAGAAAGGTGTTTTCAGACTTGGCTGCAGCTCATCAATCATCTCGAATAGGCGTCTTCTACTGTGGAACTCCAGTACTTATCAAAACACTAAAGAACCTTTGCCTAGAATTTAGCTTAAATTCATCAACCCGGTTCCAGTTCCACAAGGAGAATTTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04013 ko04624 map04013 map04624
Pfam Domains
Protein Families
EF-hand_6 FAD_binding_8 Ferric_reduct NADPH_Ox NAD_binding_6

Protein Analysis

866

Amino Acids

98.37

Weight (kDa)

8.93

Isoelectric Point (pI)

43.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NADPH_Ox PF08414 72 - 162 1.8e-25 Respiratory burst NADPH oxidase
EF-hand_7 PF13499 163 - 226 3.4e-06 EF-hand domain pair
Ferric_reduct PF01794 336 - 480 8e-12 Ferric reductase like transmembrane component
FAD_binding_8 PF08022 526 - 660 4.8e-25 FAD-binding domain
NAD_binding_6 PF08030 667 - 847 5e-46 Ferric reductase NAD binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 569
AatII GACGTC 1 cut(s) 36
Acc36I ACCTGC 1 cut(s) 347
AccI GTMKAC 3 cut(s) 837, 1138, 2316
AccIII TCCGGA 1 cut(s) 1338
AciI CCGC 3 cut(s) 881, 913, 2154
AclWI GGATC 6 cut(s) 65, 1066, 1476, 1852, 1883, 1919
AcsI RAATTY 8 cut(s) 809, 928, 1556, 1690, 1919, 2546, 2557, 2590
AcuI CTGAAG 4 cut(s) 282, 482, 1693, 2115
AcyI GRCGYC 3 cut(s) 33, 2247, 2490
AfaI GTAC 8 cut(s) 791, 920, 1478, 1619, 1646, 1661, 2358, 2514
AfeI AGCGCT 1 cut(s) 287
AfiI CCNNNNNNNGG 3 cut(s) 44, 492, 2108
AflII CTTAAG 2 cut(s) 221, 989
AflIII ACRYGT 1 cut(s) 513
AhlI ACTAGT 1 cut(s) 473
AjnI CCWGG 3 cut(s) 1270, 1357, 1726
AloI GAACNNNNNNTCC 2 cut(s) 2103, 2135
Alw21I GWGCWC 2 cut(s) 1762, 1785
Alw26I GTCTC 6 cut(s) 716, 977, 1761, 1867, 2356, 2401
AlwI GGATC 6 cut(s) 65, 1066, 1476, 1852, 1883, 1919
AlwNI CAGNNNCTG 2 cut(s) 1414, 2365
Ama87I CYCGRG 1 cut(s) 665
Aor13HI TCCGGA 1 cut(s) 1338
Aor51HI AGCGCT 1 cut(s) 287
AoxI GGCC 6 cut(s) 226, 379, 892, 1217, 1361, 2099
ApeKI GCWGC 7 cut(s) 422, 617, 629, 977, 1237, 2462, 2465
ApoI RAATTY 8 cut(s) 809, 928, 1556, 1690, 1919, 2546, 2557, 2590
AspLEI GCGC 2 cut(s) 288, 2344
AspS9I GGNCC 8 cut(s) 49, 120, 226, 892, 1217, 1361, 1964, 2099
AsuC2I CCSGG 4 cut(s) 493, 1216, 1635, 2569
AsuHPI GGTGA 1 cut(s) 542
AsuII TTCGAA 1 cut(s) 1695
AsuNHI GCTAGC 1 cut(s) 877
AvaI CYCGRG 1 cut(s) 665
AvaII GGWCC 3 cut(s) 49, 120, 1964
AxyI CCTNAGG 1 cut(s) 2137
BanII GRGCYC 3 cut(s) 1762, 1785, 1978
BbsI GAAGAC 5 cut(s) 471, 486, 1490, 1905, 2485
Bbv12I GWGCWC 2 cut(s) 1762, 1785
BbvI GCAGC 7 cut(s) 434, 629, 641, 964, 1249, 2449, 2477
BccI CCATC 4 cut(s) 46, 300, 422, 527
BcgI CGANNNNNNTGC 2 cut(s) 942, 976
BciT130I CCWGG 3 cut(s) 1272, 1359, 1728
BclI TGATCA 1 cut(s) 636
BcnI CCSGG 4 cut(s) 493, 1216, 1635, 2569
BcoDI GTCTC 6 cut(s) 716, 977, 1761, 1867, 2356, 2401
BcuI ACTAGT 1 cut(s) 473
BfmI CTRYAG 3 cut(s) 1776, 1893, 2463
BfoI RGCGCY 1 cut(s) 289
BfrI CTTAAG 2 cut(s) 221, 989
BfuAI ACCTGC 1 cut(s) 347
BisI GCNGC 8 cut(s) 423, 618, 630, 978, 1238, 2155, 2463, 2466
BlpI GCTNAGC 1 cut(s) 2150
BlsI GCNGC 8 cut(s) 424, 619, 631, 979, 1239, 2156, 2464, 2467
BmcAI AGTACT 1 cut(s) 2514
Bme1390I CCNGG 7 cut(s) 493, 1216, 1272, 1359, 1635, 1728, 2569
Bme18I GGWCC 3 cut(s) 49, 120, 1964
BmeT110I CYCGRG 1 cut(s) 665
BmgT120I GGNCC 8 cut(s) 49, 120, 226, 892, 1217, 1361, 1964, 2099
BmiI GGNNCC 7 cut(s) 50, 121, 337, 1965, 1966, 1975, 2573
BmrFI CCNGG 7 cut(s) 493, 1216, 1272, 1359, 1635, 1728, 2569
BmrI ACTGGG 1 cut(s) 1290
BmsI GCATC 7 cut(s) 382, 944, 1162, 1711, 1722, 2287, 2320
BmtI GCTAGC 1 cut(s) 881
BmuI ACTGGG 1 cut(s) 1290
BoxI GACNNNNGTC 2 cut(s) 361, 2312
BpiI GAAGAC 5 cut(s) 471, 486, 1490, 1905, 2485
BpmI CTGGAG 3 cut(s) 868, 2169, 2493
Bpu1102I GCTNAGC 1 cut(s) 2150
Bpu14I TTCGAA 1 cut(s) 1695
BpuEI CTTGAG 3 cut(s) 1352, 1655, 1762
BpuMI CCSGG 4 cut(s) 493, 1216, 1635, 2569
Bsa29I ATCGAT 1 cut(s) 63
BsaBI GATNNNNATC 1 cut(s) 69
BsaHI GRCGYC 3 cut(s) 33, 2247, 2490
BsaI GGTCTC 2 cut(s) 977, 1867
BsaJI CCNNGG 6 cut(s) 75, 664, 1358, 1726, 1946, 2352
BsaWI WCCGGW 1 cut(s) 1338
BsaXI ACNNNNNCTCC 6 cut(s) 1615, 1645, 2103, 2133, 2167, 2197
Bsc4I CCNNNNNNNGG 3 cut(s) 44, 492, 2108
Bse21I CCTNAGG 1 cut(s) 2137
Bse3DI GCAATG 1 cut(s) 1209
Bse8I GATNNNNATC 1 cut(s) 69
BseAI TCCGGA 1 cut(s) 1338
BseBI CCWGG 3 cut(s) 1272, 1359, 1728
BseCI ATCGAT 1 cut(s) 63
BseDI CCNNGG 6 cut(s) 75, 664, 1358, 1726, 1946, 2352
BseGI GGATG 4 cut(s) 556, 1500, 1702, 2260
BseJI GATNNNNATC 1 cut(s) 69
BseLI CCNNNNNNNGG 3 cut(s) 44, 492, 2108
BseMI GCAATG 1 cut(s) 1209
BseMII CTCAG 6 cut(s) 24, 558, 972, 1798, 1997, 2094
BseRI GAGGAG 8 cut(s) 154, 210, 213, 216, 219, 222, 225, 228
BseXI GCAGC 7 cut(s) 434, 629, 641, 964, 1249, 2449, 2477
BsgI GTGCAG 1 cut(s) 441
BshFI GGCC 6 cut(s) 228, 381, 894, 1219, 1363, 2101
BshVI ATCGAT 1 cut(s) 63
BsiHKAI GWGCWC 2 cut(s) 1762, 1785
BsiHKCI CYCGRG 1 cut(s) 665
BsiSI CCGG 6 cut(s) 493, 1215, 1339, 1635, 2407, 2569
BslFI GGGAC 5 cut(s) 20, 133, 338, 1144, 1977
BslI CCNNNNNNNGG 3 cut(s) 44, 492, 2108
BsmAI GTCTC 6 cut(s) 716, 977, 1761, 1867, 2356, 2401
BsmBI CGTCTC 1 cut(s) 716
BsmFI GGGAC 5 cut(s) 20, 133, 338, 1144, 1977
BsnI GGCC 6 cut(s) 228, 381, 894, 1219, 1363, 2101
Bso31I GGTCTC 2 cut(s) 977, 1867
BsoBI CYCGRG 1 cut(s) 665
Bsp119I TTCGAA 1 cut(s) 1695
Bsp1286I GDGCHC 3 cut(s) 1762, 1785, 1978
Bsp13I TCCGGA 1 cut(s) 1338
Bsp1407I TGTACA 1 cut(s) 1617
Bsp1720I GCTNAGC 1 cut(s) 2150
Bsp19I CCATGG 2 cut(s) 75, 2352
BspACI CCGC 3 cut(s) 881, 913, 2154
BspANI GGCC 6 cut(s) 228, 381, 894, 1219, 1363, 2101
BspCNI CTCAG 6 cut(s) 23, 557, 973, 1797, 1996, 2095
BspDI ATCGAT 1 cut(s) 63
BspEI TCCGGA 1 cut(s) 1338
BspLI GGNNCC 7 cut(s) 50, 121, 337, 1965, 1966, 1975, 2573
BspMAI CTGCAG 1 cut(s) 2467
BspMI ACCTGC 1 cut(s) 347
BspOI GCTAGC 1 cut(s) 881
BspPI GGATC 6 cut(s) 65, 1066, 1476, 1852, 1883, 1919
BspQI GCTCTTC 1 cut(s) 639
BspT104I TTCGAA 1 cut(s) 1695
BspTI CTTAAG 2 cut(s) 221, 989
BspTNI GGTCTC 2 cut(s) 977, 1867
BsrDI GCAATG 1 cut(s) 1209
BsrGI TGTACA 1 cut(s) 1617
BssECI CCNNGG 6 cut(s) 75, 664, 1358, 1726, 1946, 2352
BssNAI GTATAC 1 cut(s) 1139
BssNI GRCGYC 3 cut(s) 33, 2247, 2490
BssT1I CCWWGG 2 cut(s) 75, 2352
Bst1107I GTATAC 1 cut(s) 1139
Bst2UI CCWGG 3 cut(s) 1272, 1359, 1728
Bst4CI ACNGT 6 cut(s) 387, 1126, 1448, 1617, 2337, 2501
Bst6I CTCTTC 2 cut(s) 639, 1439
BstACI GRCGYC 3 cut(s) 33, 2247, 2490
BstAFI CTTAAG 2 cut(s) 221, 989
BstAPI GCANNNNNTGC 3 cut(s) 626, 974, 2339
BstAUI TGTACA 1 cut(s) 1617
BstBI TTCGAA 1 cut(s) 1695
BstC8I GCNNGC 5 cut(s) 230, 379, 879, 1162, 1416
BstDSI CCRYGG 2 cut(s) 75, 2352
BstENI CCTNNNNNAGG 1 cut(s) 2106
BstF5I GGATG 4 cut(s) 556, 1500, 1702, 2260
BstH2I RGCGCY 1 cut(s) 289
BstHHI GCGC 2 cut(s) 288, 2344
BstMAI GTCTC 6 cut(s) 716, 977, 1761, 1867, 2356, 2401
BstMWI GCNNNNNNNGC 3 cut(s) 626, 974, 2339
BstNI CCWGG 3 cut(s) 1272, 1359, 1728
BstNSI RCATGY 1 cut(s) 517
BstPAI GACNNNNGTC 2 cut(s) 361, 2312
BstSCI CCNGG 7 cut(s) 491, 1214, 1270, 1357, 1633, 1726, 2567
BstSFI CTRYAG 3 cut(s) 1776, 1893, 2463
BstV1I GCAGC 7 cut(s) 434, 629, 641, 964, 1249, 2449, 2477
BstV2I GAAGAC 5 cut(s) 471, 486, 1490, 1905, 2485
BstX2I RGATCY 2 cut(s) 1468, 1844
BstYI RGATCY 2 cut(s) 1468, 1844
BstZ17I GTATAC 1 cut(s) 1139
Bsu15I ATCGAT 1 cut(s) 63
Bsu36I CCTNAGG 1 cut(s) 2137
BsuRI GGCC 6 cut(s) 228, 381, 894, 1219, 1363, 2101
BsuTUI ATCGAT 1 cut(s) 63
BtgI CCRYGG 2 cut(s) 75, 2352
BtsCI GGATG 4 cut(s) 556, 1500, 1702, 2260
BtsIMutI CAGTG 2 cut(s) 1518, 1613
BveI ACCTGC 1 cut(s) 347
Cac8I GCNNGC 5 cut(s) 230, 379, 879, 1162, 1416
CaiI CAGNNNCTG 2 cut(s) 1414, 2365
CfoI GCGC 2 cut(s) 288, 2344
Cfr13I GGNCC 8 cut(s) 49, 120, 226, 892, 1217, 1361, 1964, 2099
ClaI ATCGAT 1 cut(s) 63
CseI GACGC 4 cut(s) 2041, 2236, 2302, 2479
Csp6I GTAC 8 cut(s) 790, 919, 1477, 1618, 1645, 1660, 2357, 2513
CviQI GTAC 8 cut(s) 790, 919, 1477, 1618, 1645, 1660, 2357, 2513
DraI TTTAAA 1 cut(s) 2242
Eam1104I CTCTTC 2 cut(s) 639, 1439
EarI CTCTTC 2 cut(s) 639, 1439
Ecl136II GAGCTC 2 cut(s) 1760, 1783
Eco130I CCWWGG 2 cut(s) 75, 2352
Eco24I GRGCYC 3 cut(s) 1762, 1785, 1978
Eco31I GGTCTC 2 cut(s) 977, 1867
Eco32I GATATC 1 cut(s) 2065
Eco47I GGWCC 3 cut(s) 49, 120, 1964
Eco47III AGCGCT 1 cut(s) 287
Eco53kI GAGCTC 2 cut(s) 1760, 1783
Eco57I CTGAAG 4 cut(s) 282, 482, 1693, 2115
Eco81I CCTNAGG 1 cut(s) 2137
Eco88I CYCGRG 1 cut(s) 665
EcoICRI GAGCTC 2 cut(s) 1760, 1783
EcoNI CCTNNNNNAGG 1 cut(s) 2106
EcoO109I RGGNCCY 5 cut(s) 49, 226, 1361, 1964, 2099
EcoRI GAATTC 1 cut(s) 1919
EcoRII CCWGG 3 cut(s) 1270, 1357, 1726
EcoRV GATATC 1 cut(s) 2065
EcoT14I CCWWGG 2 cut(s) 75, 2352
EcoT22I ATGCAT 2 cut(s) 397, 2298
EcoT38I GRGCYC 3 cut(s) 1762, 1785, 1978
ErhI CCWWGG 2 cut(s) 75, 2352
Esp3I CGTCTC 1 cut(s) 716
FalI AAGNNNNNCTT 4 cut(s) 36, 68, 1952, 1984
FaqI GGGAC 5 cut(s) 20, 133, 338, 1144, 1977
FauNDI CATATG 1 cut(s) 625
FbaI TGATCA 1 cut(s) 636
FblI GTMKAC 3 cut(s) 837, 1138, 2316
Fnu4HI GCNGC 8 cut(s) 423, 618, 630, 978, 1238, 2155, 2463, 2466
FokI GGATG 4 cut(s) 563, 1507, 1689, 2267
FriOI GRGCYC 3 cut(s) 1762, 1785, 1978
Fsp4HI GCNGC 8 cut(s) 423, 618, 630, 978, 1238, 2155, 2463, 2466
GlaI GCGC 2 cut(s) 287, 2343
GluI GCNGC 8 cut(s) 423, 618, 630, 978, 1238, 2155, 2463, 2466
GsuI CTGGAG 3 cut(s) 868, 2169, 2493
HaeII RGCGCY 1 cut(s) 289
HaeIII GGCC 6 cut(s) 228, 381, 894, 1219, 1363, 2101
HapII CCGG 6 cut(s) 493, 1215, 1339, 1635, 2407, 2569
HgaI GACGC 4 cut(s) 2041, 2236, 2302, 2479
HhaI GCGC 2 cut(s) 288, 2344
Hin1I GRCGYC 3 cut(s) 33, 2247, 2490
Hin6I GCGC 2 cut(s) 286, 2342
HinP1I GCGC 2 cut(s) 286, 2342
HincII GTYRAC 2 cut(s) 886, 2211
HindII GTYRAC 2 cut(s) 886, 2211
HinfI GANTC 9 cut(s) 257, 362, 488, 778, 796, 1146, 1638, 2105, 2182
HpaI GTTAAC 2 cut(s) 886, 2211
HpaII CCGG 6 cut(s) 493, 1215, 1339, 1635, 2407, 2569
HphI GGTGA 1 cut(s) 542
Hpy188I TCNGA 9 cut(s) 13, 262, 501, 547, 1757, 1787, 1947, 1986, 2455
Hpy188III TCNNGA 9 cut(s) 1339, 1369, 1466, 1553, 1679, 2109, 2186, 2427, 2481
Hpy99I CGWCG 2 cut(s) 2057, 2127
HpyCH4III ACNGT 6 cut(s) 387, 1126, 1448, 1617, 2337, 2501
HpyCH4IV ACGT 2 cut(s) 33, 888
HpyF10VI GCNNNNNNNGC 3 cut(s) 626, 974, 2339
HpySE526I ACGT 2 cut(s) 33, 888
Hsp92I GRCGYC 3 cut(s) 33, 2247, 2490
HspAI GCGC 2 cut(s) 286, 2342
KflI GGGWCCC 1 cut(s) 1964
Kpn2I TCCGGA 1 cut(s) 1338
Ksp22I TGATCA 1 cut(s) 636
KspAI GTTAAC 2 cut(s) 886, 2211
LguI GCTCTTC 1 cut(s) 639
LmnI GCTCC 3 cut(s) 1973, 2033, 2138
Lsp1109I GCAGC 7 cut(s) 434, 629, 641, 964, 1249, 2449, 2477
LweI GCATC 7 cut(s) 382, 944, 1162, 1711, 1722, 2287, 2320
MaeII ACGT 2 cut(s) 33, 888
MaeIII GTNAC 5 cut(s) 518, 1064, 1244, 1540, 2270
MflI RGATCY 2 cut(s) 1468, 1844
MhlI GDGCHC 3 cut(s) 1762, 1785, 1978
MlyI GAGTC 3 cut(s) 371, 2114, 2176
Mph1103I ATGCAT 2 cut(s) 397, 2298
MroI TCCGGA 1 cut(s) 1338
MslI CAYNNNNRTG 4 cut(s) 159, 297, 347, 2233
MspCI CTTAAG 2 cut(s) 221, 989
MspI CCGG 6 cut(s) 493, 1215, 1339, 1635, 2407, 2569
MspR9I CCNGG 7 cut(s) 493, 1216, 1272, 1359, 1635, 1728, 2569
MvaI CCWGG 3 cut(s) 1272, 1359, 1728
MwoI GCNNNNNNNGC 3 cut(s) 626, 974, 2339
NciI CCSGG 4 cut(s) 493, 1216, 1635, 2569
NcoI CCATGG 2 cut(s) 75, 2352
NdeI CATATG 1 cut(s) 625
NheI GCTAGC 1 cut(s) 877
NlaIV GGNNCC 7 cut(s) 50, 121, 337, 1965, 1966, 1975, 2573
NmuCI GTSAC 2 cut(s) 518, 2270
NsiI ATGCAT 2 cut(s) 397, 2298
NspI RCATGY 1 cut(s) 517
NspV TTCGAA 1 cut(s) 1695
PciI ACATGT 1 cut(s) 513
PciSI GCTCTTC 1 cut(s) 639
PfeI GAWTC 6 cut(s) 257, 488, 778, 796, 1146, 1638
PfoI TCCNGGA 1 cut(s) 1633
PkrI GCNGC 8 cut(s) 424, 619, 631, 979, 1239, 2156, 2464, 2467
PleI GAGTC 3 cut(s) 370, 2113, 2176
PpsI GAGTC 3 cut(s) 370, 2113, 2176
PpuMI RGGWCCY 2 cut(s) 49, 1964
PscI ACATGT 1 cut(s) 513
PshAI GACNNNNGTC 2 cut(s) 361, 2312
PsiI TTATAA 1 cut(s) 569
Psp124BI GAGCTC 2 cut(s) 1762, 1785
Psp5II RGGWCCY 2 cut(s) 49, 1964
Psp6I CCWGG 3 cut(s) 1270, 1357, 1726
PspGI CCWGG 3 cut(s) 1270, 1357, 1726
PspN4I GGNNCC 7 cut(s) 50, 121, 337, 1965, 1966, 1975, 2573
PspPI GGNCC 8 cut(s) 49, 120, 226, 892, 1217, 1361, 1964, 2099
PspPPI RGGWCCY 2 cut(s) 49, 1964
PstI CTGCAG 1 cut(s) 2467
PstNI CAGNNNCTG 2 cut(s) 1414, 2365
PsuI RGATCY 2 cut(s) 1468, 1844
RsaI GTAC 8 cut(s) 791, 920, 1478, 1619, 1646, 1661, 2358, 2514
RsaNI GTAC 8 cut(s) 790, 919, 1477, 1618, 1645, 1660, 2357, 2513
RseI CAYNNNNRTG 4 cut(s) 159, 297, 347, 2233
SacI GAGCTC 2 cut(s) 1762, 1785
SapI GCTCTTC 1 cut(s) 639
SatI GCNGC 8 cut(s) 423, 618, 630, 978, 1238, 2155, 2463, 2466
Sau96I GGNCC 8 cut(s) 49, 120, 226, 892, 1217, 1361, 1964, 2099
ScaI AGTACT 1 cut(s) 2514
SchI GAGTC 3 cut(s) 371, 2114, 2176
ScrFI CCNGG 7 cut(s) 493, 1216, 1272, 1359, 1635, 1728, 2569
SduI GDGCHC 3 cut(s) 1762, 1785, 1978
SfaNI GCATC 7 cut(s) 382, 944, 1162, 1711, 1722, 2287, 2320
SfcI CTRYAG 3 cut(s) 1776, 1893, 2463
SfuI TTCGAA 1 cut(s) 1695
SinI GGWCC 3 cut(s) 49, 120, 1964
SmiMI CAYNNNNRTG 4 cut(s) 159, 297, 347, 2233
SmlI CTYRAG 5 cut(s) 221, 989, 1367, 1670, 1741
SmoI CTYRAG 5 cut(s) 221, 989, 1367, 1670, 1741
SpeI ACTAGT 1 cut(s) 473
SsiI CCGC 3 cut(s) 881, 913, 2154
SspI AATATT 2 cut(s) 1461, 1548
SstI GAGCTC 2 cut(s) 1762, 1785
StyD4I CCNGG 7 cut(s) 491, 1214, 1270, 1357, 1633, 1726, 2567
StyI CCWWGG 2 cut(s) 75, 2352
TaaI ACNGT 6 cut(s) 387, 1126, 1448, 1617, 2337, 2501
TaiI ACGT 2 cut(s) 36, 891
TaqII GACCGA 1 cut(s) 1891
TatI WGTACW 2 cut(s) 1617, 2512
TauI GCSGC 1 cut(s) 2157
TfiI GAWTC 6 cut(s) 257, 488, 778, 796, 1146, 1638
TscAI CASTG 2 cut(s) 1518, 1620
TseFI GTSAC 2 cut(s) 518, 2270
TseI GCWGC 7 cut(s) 422, 617, 629, 977, 1237, 2462, 2465
Tsp45I GTSAC 2 cut(s) 518, 2270
TspDTI ATGAA 9 cut(s) 17, 143, 1173, 1192, 1426, 1749, 2035, 2217, 2550
TspGWI ACGGA 1 cut(s) 740
TspRI CASTG 2 cut(s) 1518, 1620
Vha464I CTTAAG 2 cut(s) 221, 989
VpaK11BI GGWCC 3 cut(s) 49, 120, 1964
XagI CCTNNNNNAGG 1 cut(s) 2106
XapI RAATTY 8 cut(s) 809, 928, 1556, 1690, 1919, 2546, 2557, 2590
XceI RCATGY 1 cut(s) 517
XcmI CCANNNNNNNNNTGG 1 cut(s) 592
XmiI GTMKAC 3 cut(s) 837, 1138, 2316
ZraI GACGTC 1 cut(s) 34
ZrmI AGTACT 1 cut(s) 2514
Zsp2I ATGCAT 2 cut(s) 397, 2298
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.