AT5G60010

respiratory burst oxidase homolog protein H

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0010309
Physical Location & Seq
Forward (+)
24160270 .. 24165052
4783 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G60010.1

Sequence Viewer

Length: 2661 bp
ATGAAAAGTAACACTCCTACGGAGGATTCAACAAAATGGATGTTAGAGAGTGTAGAGATCGATTCAATGGGTGAAAGCTCCTCAAAAGAACCCGAAATTAACCTCAACAAGAACGAAGGTGGTCTGAAGAAGAACGCGTCAAGAAATCTCGGCGTGGGATCGATAATCCGAACATTGAGCGTTTCAAACTGGAGAAAGAGCGGGAATCTAGGCTCTCCGAGCACAAGGAAAAGTGGAAACCTGGGGCCTCCGACCAATGCCGTGCCCAAGAAGACAGGTCCACAAAGAGTGGAGAGGACAACATCAAGCGCGGCTAGGGGACTTCAGAGCTTACGGTTCCTTGATCGGACAGTCACCGGACGAGAACGAGATGCATGGAGATCGATTGAGAACCGGTTCAATCAGTTCTCTGTTGATGGCAAGTTGCCTAAAGAGAAATTCGGCGTCTGCATTGGAATGGGAGACACAATGGAGTTTGCGGCAGAAGTTTATGAAGCATTGGGTCGGAGGAGACAAATAGAGACAGAAAACGGTATTGACAAAGAACAACTCAAGCTGTTTTGGGAAGACATGATCAAGAAAGACCTCGATTGTCGTCTTCAGATCTTCTTCGACATGTGTGACAAAAACGGAGATGGTAAGCTGACGGAAGAGGAAGTGAAAGAGGTCATAGTATTGAGTGCCTCGGCGAACCGCCTCGGGAATTTAAAAAAGAATGCTGCAGCTTACGCATCTTTGATCATGGAAGAACTCGACCCTGATCATAAAGGATACATAGAGATGTGGCAGTTAGAAATACTACTAACAGGAATGGTGACAAACGCTGATACGGAGAAGATGAAGAAATCGCAAACGCTGACACGCGCGATGATCCCAGAGCGGTACAGAACGCCGATGAGCAAGTACGTCTCCGTAACCGCGGAACTGATGCACGAGAATTGGAAAAAATTATGGGTACTCGCTTTGTGGGCCATCATCAACGTCTATCTATTCATGTGGAAGTACGAAGAGTTCATGAGAAACCCTCTCTACAACATCACCGGACGCTGCGTTTGCGCCGCTAAAGGCGCTGCTGAAACGCTGAAACTCAACATGGCTCTGATTTTGGTCCCAGTCTGTAGAAAAACCCTAACGATACTTAGGTCAACGTTCTTGAACCGTGTGGTCCCATTCGACGACAACATAAACTTCCACAAGGTGATTGCATATATGATCGCGTTCCAGGCTTTGCTCCACACGGCACTTCACATCTTCTGTAACTACCCTAGGTTAAGCTCGTGCTCTTACGACGTGTTCTTGACGTACGCGGGTGCTGCCTTGGGAAATACGCAACCGAGTTACCTAGGTTTAATGTTGACGTCAGTGTCGATCACGGGTGTTTTAATGATTTTCTTCATGGGATTCTCGTTTACACTGGCGATGCATTATTTTAGAAGGAACATAGTGAAATTGCCTAAACCGTTTAACGTTCTTGCTGGGTTTAATGCGTTTTGGTATGCTCATCATTTGTTGGTTCTTGCTTATATTCTTCTCATCATCCATGGTTACTATCTTATCATCGAGAAGCCTTGGTACCAGAAGACGACATGGATGTATTTGGCCGTGCCGATGTTGTTCTACGCGAGTGAGAGGCTATTCTCACGTCTCCTTCAAGAACACAGCCATCGTGTCAACGTTATTAAGGCTATTGTATATTCGGGGAACGTTCTTGCACTTTATGTTACAAAACCTCCCGGATTCAAATACAAAAGTGGCATGTACATGTTTGTCAAGTGTCCAGATCTCTCAAAATTTGAATGGCATCCATTCTCCATCACTTCTGCACCAGGAGATGACTATTTAAGTGTTCACATTAGAGCCTTAGGAGATTGGACCACTGAACTTAGGAGCAGATTTGCAAAGACATGCGAGCCTACTCAAGCAGCCGCTAAACCTAAACCAAACAGTCTTATGAGGATGGAAACAAGAGCTGCGGGTGTGAATCCTCACATTGAAGAATCACAAGTCTTGTTCCCAAAAATATTCATCAAAGGACCGTATGGAGCTCCGGCACAAAATTATCAGAAGTTCGACATCCTCTTACTAGTTGGGCTAGGGATTGGGGCAACTCCATTCATAAGCATTTTGAAGGACATGTTAAACCATCTGAAACCCGGAATTCCCAGAAGTGGGCAAAAGTACGAAGGAAGTGTAGGAGGAGAGAGTATAGGAGGTGATAGTGTTAGTGGTGGAGGAGGCAAGAAGTTTCCTCAAAGAGCATATTTTTTTTGGGTGACAAGAGAACAAGCTTCCTTTGATTGGTTCAAGGGAGTTATGGATGACATCGCAGAGTATGATAAAACCCATGTAATAGAAATGCATAACTACTTAACAAGCATGTACGAAGCTGGAGATGCAAGATCTGCCCTTATCGCCATGGTTCAGAAACTTCAACATGCCAAGAACGGTGTTGATATTGTCTCCGAAAGCCGGATACGAACACATTTTGCAAGACCTAATTGGAGGAAGGTTTTTTCTGAATTGTCAAGCAAACACGAAGCTTGTCGAATAGGTGTATTCTACTGTGGAAGTCCAACACTGGTTCGACCACTTAAAGAACTCTGTCAGGAGTTTAGTCTCGAGTCATCCACTCGTTTTACTTTCCACAAGGAAAATTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0016020
KEGG Pathways
Metabolic & Signaling
ko04013 ko04624 map04013 map04624
Pfam Domains
Protein Families
EF-hand_6 FAD_binding_8 Ferric_reduct NADPH_Ox NAD_binding_6

Protein Analysis

886

Amino Acids

100.63

Weight (kDa)

9.25

Isoelectric Point (pI)

42.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NADPH_Ox PF08414 96 - 198 5.7e-33 Respiratory burst NADPH oxidase
EF-hand_7 PF13499 199 - 260 2.1e-06 EF-hand domain pair
Ferric_reduct PF01794 366 - 512 1.3e-11 Ferric reductase like transmembrane component
FAD_binding_8 PF08022 556 - 684 6e-30 FAD-binding domain
NAD_binding_6 PF08030 690 - 869 1.2e-44 Ferric reductase NAD binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1363
AatII GACGTC 1 cut(s) 1361
Acc65I GGTACC 1 cut(s) 1572
AccB1I GGYRCC 1 cut(s) 1572
AccBSI CCGCTC 2 cut(s) 201, 880
AccII CGCG 8 cut(s) 137, 311, 864, 866, 920, 1217, 1307, 1622
AclI AACGTT 4 cut(s) 1148, 1467, 1674, 1704
AclWI GGATC 2 cut(s) 166, 865
AcoI YGGCCR 1 cut(s) 1599
AcsI RAATTY 5 cut(s) 437, 703, 1790, 2157, 2653
AcuI CTGAAG 3 cut(s) 146, 308, 584
AcyI GRCGYC 2 cut(s) 444, 1358
AdeI CACNNNGTG 1 cut(s) 1198
AfaI GTAC 9 cut(s) 884, 905, 957, 1004, 1304, 1574, 1760, 2180, 2381
AfiI CCNNNNNNNGG 4 cut(s) 2168, 2169, 2298, 2469
AflIII ACRYGT 5 cut(s) 135, 615, 1290, 1761, 2133
AgeI ACCGGT 1 cut(s) 393
AhlI ACTAGT 1 cut(s) 2083
AjiI CACGTC 2 cut(s) 1291, 1643
AjnI CCWGG 3 cut(s) 240, 1221, 1825
Alw21I GWGCWC 3 cut(s) 224, 1283, 2047
Alw26I GTCTC 7 cut(s) 456, 505, 515, 913, 1649, 2464, 2621
AlwI GGATC 2 cut(s) 166, 865
Ama87I CYCGRG 2 cut(s) 698, 2618
AoxI GGCC 3 cut(s) 245, 969, 1599
ApeKI GCWGC 7 cut(s) 719, 722, 1047, 1070, 1313, 1922, 1970
ApoI RAATTY 5 cut(s) 437, 703, 1790, 2157, 2653
ArsI GACNNNNNNTTYG 2 cut(s) 1035, 1067
AsiGI ACCGGT 1 cut(s) 393
Asp700I GAANNNNTTC 1 cut(s) 395
Asp718I GGTACC 1 cut(s) 1572
AspA2I CCTAGG 2 cut(s) 1265, 1342
AspLEI GCGC 4 cut(s) 311, 866, 1058, 1070
AspS9I GGNCC 7 cut(s) 245, 278, 969, 1108, 1165, 1872, 2033
AsuC2I CCSGG 2 cut(s) 1734, 2154
AsuHPI GGTGA 7 cut(s) 83, 346, 826, 1030, 1210, 2225, 2284
AvaI CYCGRG 2 cut(s) 698, 2618
AvaII GGWCC 5 cut(s) 278, 1108, 1165, 1872, 2033
AvrII CCTAGG 2 cut(s) 1265, 1342
AxyI CCTNAGG 1 cut(s) 1861
BaeGI GKGCMC 1 cut(s) 267
BaeI ACNNNNGTAYC 2 cut(s) 1127, 1160
BanI GGYRCC 1 cut(s) 1572
BanII GRGCYC 1 cut(s) 2047
BarI GAAGNNNNNNTAC 2 cut(s) 1556, 1588
BauI CACGAG 2 cut(s) 932, 1276
BbsI GAAGAC 4 cut(s) 278, 573, 590, 1586
Bbv12I GWGCWC 3 cut(s) 224, 1283, 2047
BbvI GCAGC 7 cut(s) 706, 734, 1034, 1057, 1300, 1934, 1957
BccI CCATC 7 cut(s) 410, 629, 980, 1671, 1820, 1951, 2151
BceAI ACGGC 3 cut(s) 245, 1254, 1586
BcgI CGANNNNNNTGC 2 cut(s) 363, 397
BciT130I CCWGG 3 cut(s) 242, 1223, 1827
BciVI GTATCC 2 cut(s) 764, 2466
BclI TGATCA 3 cut(s) 573, 738, 760
BcnI CCSGG 2 cut(s) 1734, 2154
BcoDI GTCTC 7 cut(s) 456, 505, 515, 913, 1649, 2464, 2621
BcuI ACTAGT 1 cut(s) 2083
BfaI CTAG 6 cut(s) 209, 315, 1266, 1343, 2084, 2093
BfmI CTRYAG 2 cut(s) 720, 1117
BfoI RGCGCY 1 cut(s) 1071
BfuI GTATCC 2 cut(s) 764, 2466
BglII AGATCT 3 cut(s) 603, 1780, 2399
BlnI CCTAGG 2 cut(s) 1265, 1342
Bme1390I CCNGG 5 cut(s) 242, 1223, 1734, 1827, 2154
Bme18I GGWCC 5 cut(s) 278, 1108, 1165, 1872, 2033
BmeT110I CYCGRG 2 cut(s) 698, 2618
BmgBI CACGTC 2 cut(s) 1291, 1643
BmgT120I GGNCC 7 cut(s) 245, 278, 969, 1108, 1165, 1872, 2033
BmiI GGNNCC 5 cut(s) 246, 338, 1110, 1167, 1574
BmrFI CCNGG 5 cut(s) 242, 1223, 1734, 1827, 2154
BmrI ACTGGG 1 cut(s) 1106
BmsI GCATC 6 cut(s) 361, 740, 918, 1410, 1810, 2383
BmuI ACTGGG 1 cut(s) 1106
BpiI GAAGAC 4 cut(s) 278, 573, 590, 1586
BplI GAGNNNNNCTC 2 cut(s) 1009, 1041
BpmI CTGGAG 2 cut(s) 211, 2409
BpuEI CTTGAG 2 cut(s) 536, 1902
BpuMI CCSGG 2 cut(s) 1734, 2154
Bsa29I ATCGAT 3 cut(s) 60, 161, 383
BsaHI GRCGYC 2 cut(s) 444, 1358
BsaWI WCCGGW 3 cut(s) 356, 393, 1040
BsaXI ACNNNNNCTCC 2 cut(s) 1714, 1744
Bsc4I CCNNNNNNNGG 4 cut(s) 2168, 2169, 2298, 2469
Bse118I RCCGGY 1 cut(s) 393
Bse1I ACTGG 4 cut(s) 194, 1112, 1419, 2583
Bse21I CCTNAGG 1 cut(s) 1861
BseBI CCWGG 3 cut(s) 242, 1223, 1827
BseCI ATCGAT 3 cut(s) 60, 161, 383
BseGI GGATG 8 cut(s) 45, 1536, 1596, 1801, 1962, 2073, 2323, 2624
BseLI CCNNNNNNNGG 4 cut(s) 2168, 2169, 2298, 2469
BseNI ACTGG 4 cut(s) 194, 1112, 1419, 2583
BseRI GAGGAG 4 cut(s) 70, 523, 2211, 2247
BseSI GKGCMC 1 cut(s) 267
BseXI GCAGC 7 cut(s) 706, 734, 1034, 1057, 1300, 1934, 1957
BseYI CCCAGC 1 cut(s) 1475
BsgI GTGCAG 1 cut(s) 1806
Bsh1236I CGCG 8 cut(s) 137, 311, 864, 866, 920, 1217, 1307, 1622
BshFI GGCC 3 cut(s) 247, 971, 1601
BshNI GGYRCC 1 cut(s) 1572
BshTI ACCGGT 1 cut(s) 393
BshVI ATCGAT 3 cut(s) 60, 161, 383
BsiHKAI GWGCWC 3 cut(s) 224, 1283, 2047
BsiHKCI CYCGRG 2 cut(s) 698, 2618
BsiSI CCGG 7 cut(s) 357, 394, 1041, 1734, 2048, 2154, 2470
BsiWI CGTACG 1 cut(s) 1302
BslFI GGGAC 3 cut(s) 333, 1094, 1151
BslI CCNNNNNNNGG 4 cut(s) 2168, 2169, 2298, 2469
BsmAI GTCTC 7 cut(s) 456, 505, 515, 913, 1649, 2464, 2621
BsmBI CGTCTC 2 cut(s) 913, 1649
BsmFI GGGAC 3 cut(s) 333, 1094, 1151
BsmI GAATGC 1 cut(s) 721
BsnI GGCC 3 cut(s) 247, 971, 1601
BsoBI CYCGRG 2 cut(s) 698, 2618
Bsp1286I GDGCHC 4 cut(s) 224, 267, 1283, 2047
Bsp1407I TGTACA 1 cut(s) 1758
Bsp19I CCATGG 2 cut(s) 1540, 2415
BspANI GGCC 3 cut(s) 247, 971, 1601
BspDI ATCGAT 3 cut(s) 60, 161, 383
BspFNI CGCG 8 cut(s) 137, 311, 864, 866, 920, 1217, 1307, 1622
BspHI TCATGA 1 cut(s) 1014
BspLI GGNNCC 5 cut(s) 246, 338, 1110, 1167, 1574
BspMAI CTGCAG 1 cut(s) 724
BspPI GGATC 2 cut(s) 166, 865
BspT107I GGYRCC 1 cut(s) 1572
BsrBI CCGCTC 2 cut(s) 201, 880
BsrFI RCCGGY 1 cut(s) 393
BsrGI TGTACA 1 cut(s) 1758
BsrI ACTGG 4 cut(s) 194, 1112, 1419, 2583
BssAI RCCGGY 1 cut(s) 393
BssNI GRCGYC 2 cut(s) 444, 1358
BssSI CACGAG 2 cut(s) 932, 1276
BssT1I CCWWGG 6 cut(s) 1265, 1317, 1342, 1540, 1568, 2415
Bst2BI CACGAG 2 cut(s) 932, 1276
Bst2UI CCWGG 3 cut(s) 242, 1223, 1827
Bst4CI ACNGT 9 cut(s) 336, 352, 533, 1160, 1461, 1946, 2037, 2447, 2564
Bst6I CTCTTC 2 cut(s) 645, 1002
BstACI GRCGYC 2 cut(s) 444, 1358
BstAPI GCANNNNNTGC 1 cut(s) 2402
BstAUI TGTACA 1 cut(s) 1758
BstC8I GCNNGC 1 cut(s) 1910
BstDEI CTNAG 3 cut(s) 1139, 1861, 1883
BstDSI CCRYGG 3 cut(s) 918, 1540, 2415
BstF5I GGATG 8 cut(s) 45, 1536, 1596, 1801, 1962, 2073, 2323, 2624
BstFNI CGCG 8 cut(s) 137, 311, 864, 866, 920, 1217, 1307, 1622
BstH2I RGCGCY 1 cut(s) 1071
BstHHI GCGC 4 cut(s) 311, 866, 1058, 1070
BstMAI GTCTC 7 cut(s) 456, 505, 515, 913, 1649, 2464, 2621
BstNI CCWGG 3 cut(s) 242, 1223, 1827
BstNSI RCATGY 7 cut(s) 619, 1759, 1765, 1908, 2137, 2380, 2438
BstSCI CCNGG 5 cut(s) 240, 1221, 1732, 1825, 2152
BstSFI CTRYAG 2 cut(s) 720, 1117
BstSLI GKGCMC 1 cut(s) 267
BstUI CGCG 8 cut(s) 137, 311, 864, 866, 920, 1217, 1307, 1622
BstV1I GCAGC 7 cut(s) 706, 734, 1034, 1057, 1300, 1934, 1957
BstV2I GAAGAC 4 cut(s) 278, 573, 590, 1586
BstX2I RGATCY 3 cut(s) 603, 1780, 2399
BstYI RGATCY 3 cut(s) 603, 1780, 2399
Bsu15I ATCGAT 3 cut(s) 60, 161, 383
Bsu36I CCTNAGG 1 cut(s) 1861
BsuI GTATCC 2 cut(s) 764, 2466
BsuRI GGCC 3 cut(s) 247, 971, 1601
BsuTUI ATCGAT 3 cut(s) 60, 161, 383
BtgI CCRYGG 3 cut(s) 918, 1540, 2415
BtgZI GCGATG 3 cut(s) 881, 1433, 2308
BtrI CACGTC 2 cut(s) 1291, 1643
BtsCI GGATG 8 cut(s) 45, 1536, 1596, 1801, 1962, 2073, 2323, 2624
BtsIMutI CAGTG 4 cut(s) 1368, 1412, 1875, 2576
Cac8I GCNNGC 1 cut(s) 1910
CciI TCATGA 1 cut(s) 1014
CfoI GCGC 4 cut(s) 311, 866, 1058, 1070
Cfr10I RCCGGY 1 cut(s) 393
Cfr13I GGNCC 7 cut(s) 245, 278, 969, 1108, 1165, 1872, 2033
Cfr42I CCGCGG 1 cut(s) 921
ClaI ATCGAT 3 cut(s) 60, 161, 383
CseI GACGC 3 cut(s) 126, 433, 1053
Csp6I GTAC 9 cut(s) 883, 904, 956, 1003, 1303, 1573, 1759, 2179, 2380
CspAI ACCGGT 1 cut(s) 393
CviQI GTAC 9 cut(s) 883, 904, 956, 1003, 1303, 1573, 1759, 2179, 2380
DdeI CTNAG 3 cut(s) 1139, 1861, 1883
DraI TTTAAA 1 cut(s) 708
DraIII CACNNNGTG 1 cut(s) 1198
DrdI GACNNNNNNGTC 1 cut(s) 1363
DseDI GACNNNNNNGTC 1 cut(s) 1363
EaeI YGGCCR 1 cut(s) 1599
Eam1104I CTCTTC 2 cut(s) 645, 1002
EarI CTCTTC 2 cut(s) 645, 1002
Ecl136II GAGCTC 1 cut(s) 2045
Eco130I CCWWGG 6 cut(s) 1265, 1317, 1342, 1540, 1568, 2415
Eco24I GRGCYC 1 cut(s) 2047
Eco47I GGWCC 5 cut(s) 278, 1108, 1165, 1872, 2033
Eco53kI GAGCTC 1 cut(s) 2045
Eco57I CTGAAG 3 cut(s) 146, 308, 584
Eco81I CCTNAGG 1 cut(s) 1861
Eco88I CYCGRG 2 cut(s) 698, 2618
EcoICRI GAGCTC 1 cut(s) 2045
EcoO109I RGGNCCY 1 cut(s) 245
EcoRI GAATTC 1 cut(s) 2157
EcoRII CCWGG 3 cut(s) 240, 1221, 1825
EcoT14I CCWWGG 6 cut(s) 1265, 1317, 1342, 1540, 1568, 2415
EcoT22I ATGCAT 3 cut(s) 376, 1425, 2361
EcoT38I GRGCYC 1 cut(s) 2047
ErhI CCWWGG 6 cut(s) 1265, 1317, 1342, 1540, 1568, 2415
Esp3I CGTCTC 2 cut(s) 913, 1649
FaqI GGGAC 3 cut(s) 333, 1094, 1151
FauI CCCGC 3 cut(s) 194, 1300, 1966
FbaI TGATCA 3 cut(s) 573, 738, 760
FokI GGATG 8 cut(s) 52, 1523, 1603, 1788, 1969, 2060, 2330, 2611
FriOI GRGCYC 1 cut(s) 2047
FspBI CTAG 6 cut(s) 209, 315, 1266, 1343, 2084, 2093
GlaI GCGC 4 cut(s) 310, 865, 1057, 1069
GsaI CCCAGC 1 cut(s) 1479
GsuI CTGGAG 2 cut(s) 211, 2409
HaeII RGCGCY 1 cut(s) 1071
HaeIII GGCC 3 cut(s) 247, 971, 1601
HapII CCGG 7 cut(s) 357, 394, 1041, 1734, 2048, 2154, 2470
HgaI GACGC 3 cut(s) 126, 433, 1053
HhaI GCGC 4 cut(s) 311, 866, 1058, 1070
Hin1I GRCGYC 2 cut(s) 444, 1358
Hin6I GCGC 4 cut(s) 309, 864, 1056, 1068
HinP1I GCGC 4 cut(s) 309, 864, 1056, 1068
HincII GTYRAC 3 cut(s) 1146, 1356, 1672
HindII GTYRAC 3 cut(s) 1146, 1356, 1672
HindIII AAGCTT 2 cut(s) 2286, 2538
HinfI GANTC 8 cut(s) 26, 62, 205, 1401, 1737, 1981, 1997, 2621
HpaII CCGG 7 cut(s) 357, 394, 1041, 1734, 2048, 2154, 2470
HphI GGTGA 7 cut(s) 83, 346, 826, 1030, 1210, 2225, 2284
Hpy166II GTNNAC 6 cut(s) 281, 1146, 1356, 1410, 1672, 1849
Hpy8I GTNNAC 6 cut(s) 281, 1146, 1356, 1410, 1672, 1849
Hpy99I CGWCG 2 cut(s) 1178, 1292
HpyAV CCTTC 6 cut(s) 110, 1428, 1658, 2122, 2177, 2500
HpyCH4III ACNGT 9 cut(s) 336, 352, 533, 1160, 1461, 1946, 2037, 2447, 2564
HpyF3I CTNAG 3 cut(s) 1139, 1861, 1883
Hsp92I GRCGYC 2 cut(s) 444, 1358
HspAI GCGC 4 cut(s) 309, 864, 1056, 1068
KpnI GGTACC 1 cut(s) 1576
Ksp22I TGATCA 3 cut(s) 573, 738, 760
KspI CCGCGG 1 cut(s) 921
LmnI GCTCC 5 cut(s) 83, 1236, 1887, 2042, 2050
Lsp1109I GCAGC 7 cut(s) 706, 734, 1034, 1057, 1300, 1934, 1957
LweI GCATC 6 cut(s) 361, 740, 918, 1410, 1810, 2383
MaeI CTAG 6 cut(s) 209, 315, 1266, 1343, 2084, 2093
MbiI CCGCTC 2 cut(s) 201, 880
MflI RGATCY 3 cut(s) 603, 1780, 2399
MhlI GDGCHC 4 cut(s) 224, 267, 1283, 2047
MluI ACGCGT 1 cut(s) 135
MlyI GAGTC 1 cut(s) 2630
MmeI TCCRAC 3 cut(s) 275, 485, 2597
Mph1103I ATGCAT 3 cut(s) 376, 1425, 2361
MroXI GAANNNNTTC 1 cut(s) 395
MslI CAYNNNNRTG 3 cut(s) 455, 779, 1760
MspA1I CMGCKG 1 cut(s) 920
MspI CCGG 7 cut(s) 357, 394, 1041, 1734, 2048, 2154, 2470
MspR9I CCNGG 5 cut(s) 242, 1223, 1734, 1827, 2154
Mva1269I GAATGC 1 cut(s) 721
MvaI CCWGG 3 cut(s) 242, 1223, 1827
MvnI CGCG 8 cut(s) 137, 311, 864, 866, 920, 1217, 1307, 1622
NciI CCSGG 2 cut(s) 1734, 2154
NcoI CCATGG 2 cut(s) 1540, 2415
NlaIV GGNNCC 5 cut(s) 246, 338, 1110, 1167, 1574
NmeAIII GCCGAG 2 cut(s) 129, 665
NmuCI GTSAC 4 cut(s) 352, 620, 814, 2272
NsiI ATGCAT 3 cut(s) 376, 1425, 2361
NspI RCATGY 7 cut(s) 619, 1759, 1765, 1908, 2137, 2380, 2438
PaeR7I CTCGAG 1 cut(s) 2618
PagI TCATGA 1 cut(s) 1014
PciI ACATGT 3 cut(s) 615, 1761, 2133
PcsI WCGNNNNNNNCGW 1 cut(s) 1364
PctI GAATGC 1 cut(s) 721
PdmI GAANNNNTTC 1 cut(s) 395
PfeI GAWTC 7 cut(s) 26, 62, 205, 1401, 1737, 1981, 1997
Pfl23II CGTACG 1 cut(s) 1302
PfoI TCCNGGA 1 cut(s) 1732
PinAI ACCGGT 1 cut(s) 393
PleI GAGTC 1 cut(s) 2629
PpsI GAGTC 1 cut(s) 2629
PscI ACATGT 3 cut(s) 615, 1761, 2133
Psp124BI GAGCTC 1 cut(s) 2047
Psp1406I AACGTT 4 cut(s) 1148, 1467, 1674, 1704
Psp6I CCWGG 3 cut(s) 240, 1221, 1825
PspFI CCCAGC 1 cut(s) 1475
PspGI CCWGG 3 cut(s) 240, 1221, 1825
PspLI CGTACG 1 cut(s) 1302
PspN4I GGNNCC 5 cut(s) 246, 338, 1110, 1167, 1574
PspPI GGNCC 7 cut(s) 245, 278, 969, 1108, 1165, 1872, 2033
PsrI GAACNNNNNNTAC 2 cut(s) 995, 1027
PstI CTGCAG 1 cut(s) 724
PsuI RGATCY 3 cut(s) 603, 1780, 2399
RsaI GTAC 9 cut(s) 884, 905, 957, 1004, 1304, 1574, 1760, 2180, 2381
RsaNI GTAC 9 cut(s) 883, 904, 956, 1003, 1303, 1573, 1759, 2179, 2380
RseI CAYNNNNRTG 3 cut(s) 455, 779, 1760
SacI GAGCTC 1 cut(s) 2047
SacII CCGCGG 1 cut(s) 921
Sau96I GGNCC 7 cut(s) 245, 278, 969, 1108, 1165, 1872, 2033
SchI GAGTC 1 cut(s) 2630
ScrFI CCNGG 5 cut(s) 242, 1223, 1734, 1827, 2154
SduI GDGCHC 4 cut(s) 224, 267, 1283, 2047
SfaNI GCATC 6 cut(s) 361, 740, 918, 1410, 1810, 2383
SfcI CTRYAG 2 cut(s) 720, 1117
Sfr274I CTCGAG 1 cut(s) 2618
Sfr303I CCGCGG 1 cut(s) 921
SgrBI CCGCGG 1 cut(s) 921
SinI GGWCC 5 cut(s) 278, 1108, 1165, 1872, 2033
SlaI CTCGAG 1 cut(s) 2618
SmiMI CAYNNNNRTG 3 cut(s) 455, 779, 1760
SmlI CTYRAG 3 cut(s) 551, 1917, 2618
SmoI CTYRAG 3 cut(s) 551, 1917, 2618
SpeI ACTAGT 1 cut(s) 2083
SspI AATATT 1 cut(s) 2022
SspMI CTAG 6 cut(s) 209, 315, 1266, 1343, 2084, 2093
SstI GAGCTC 1 cut(s) 2047
StyD4I CCNGG 5 cut(s) 240, 1221, 1732, 1825, 2152
StyI CCWWGG 6 cut(s) 1265, 1317, 1342, 1540, 1568, 2415
TaaI ACNGT 9 cut(s) 336, 352, 533, 1160, 1461, 1946, 2037, 2447, 2564
TatI WGTACW 1 cut(s) 1758
TauI GCSGC 4 cut(s) 314, 482, 1061, 1928
TfiI GAWTC 7 cut(s) 26, 62, 205, 1401, 1737, 1981, 1997
TscAI CASTG 4 cut(s) 1368, 1419, 1882, 2583
TseFI GTSAC 4 cut(s) 352, 620, 814, 2272
TseI GCWGC 7 cut(s) 719, 722, 1047, 1070, 1313, 1922, 1970
Tsp45I GTSAC 4 cut(s) 352, 620, 814, 2272
TspDTI ATGAA 8 cut(s) 17, 507, 854, 982, 1003, 1384, 2014, 2104
TspGWI ACGGA 5 cut(s) 35, 645, 662, 845, 901
TspRI CASTG 4 cut(s) 1368, 1419, 1882, 2583
VpaK11BI GGWCC 5 cut(s) 278, 1108, 1165, 1872, 2033
XapI RAATTY 5 cut(s) 437, 703, 1790, 2157, 2653
XceI RCATGY 7 cut(s) 619, 1759, 1765, 1908, 2137, 2380, 2438
XhoI CTCGAG 1 cut(s) 2618
XmaJI CCTAGG 2 cut(s) 1265, 1342
XmnI GAANNNNTTC 1 cut(s) 395
XspI CTAG 6 cut(s) 209, 315, 1266, 1343, 2084, 2093
ZraI GACGTC 1 cut(s) 1359
Zsp2I ATGCAT 3 cut(s) 376, 1425, 2361
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.