Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0007746

Physical Location & Seq

Genomic Coordinates Forward (+)

17332926 .. 17336966

Gene Structure 4041 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G47060.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2409 bp

ATGACTACTACATTCGAATTTCTGCAACCAAGAATCCACGGATTTGCAACTTGTTGTAGTAGTAATAGTCTATTGTACTCGAAAGCTTCGAGATTTTTCAACGATCGTTGTAGGGTTTATCGCCAAAATCCGAATCGGTTTGTCTCCAATTCAATCACGCTTCCTCTGCAGAAGAAACAAGTTACAGTGTTGAGAAATCACGAAAGGTTTAATCTTTGGGATGGGTTTTCAAGAAAGAAGAGTAGATTAGTTGTGAATTGTCAAGAAGATGATCAGAACGAGAGTTCTAGTGAGGAGGAAGAAAGCAGTCAGAGTACTCCGGCGAAGTCGGAGAGGAAAAGAGAGAAGAAAGAAGATAAGGTGTGGTGGTCAAAGGGCAAGAAATGGCAGTGGCAGCCAATAATCCAAGCGCAAGGGATTGGAGTTTTGTTGTTGCAATTGAGTGTTGTTATGTTTGTGATGCGATTGCTTCGACCTGGTATACCTTTACCTGGATCGGAGCCTCGAATTCAGACGACTTTTGTGAGTGTACCGTATAGTGAGTTCTTAAGTAAAGTTAACAGTAACCAGGTGCAGAAAGTGGAGGTTGATGGGGTTCAAGTTTTGTTTAAGTTAAGAGATGATGGGAAGTGGCAAGAGAGTGAAACTAGTAGGTTGTCTCAGTCGTCTGAATCGTTGTTAAGAACTGTGGCTCCTACGAAAAGGGTTGTGTATTCCACTACTAGGCCGGGTGATATCAAAACACCGTATGAGAAGATGCTTGGGAATAATGTGGAATTTGGATCGCCTGAGAAGCGTTCTGGTGGCTTCTTCAACTCTGCATTGATAGCTCTTTTCTACATAGCGGTACTTGCTGGGCTTATTCGATTCCCTGTTAGCTTCTCCACGAGTTCAACCGGCCAGCTTAGGACCCGAAAGGCTGGTGGTCCTGATGGGGGAAAAGTCTCTGGTGGAGGTGAAACAATCACTTTTGCGGATGTTGCAGGTGTTGATGAAGCAAAGGAAGAGCTAGAAGAAATCGTGGAATTTCTTAGGAATCCTGAAAAGTATGTCCGTCTAGGTGCACGTCCTCCGCGTGGTGTCCTATTGGTTGGTCTTCCCGGAACAGGGAAAACCCTTCTTGCAAAGGCTGTTGCTGGGGAAGCTGAAGTCCCCTTCATAAGTTGCTCTGCAAGTGAGTTTGTAGAGCTGTATGTCGGTATGGGTGCCTCACGTGTAAGGGATCTTTTTGCACGGGCCAAGAAGGAAGCTCCATCGATTATATTTATTGATGAGATAGATGCTGTGGCAAAAAGCCGTGATGGTAAATTCCGAATGGGGAGCAACGATGAAAGGGAGCAAACTTTAAATCAGTTGCTCACTGAGATGGATGGTTTTGACAGCAATTCTGCGGTTATCGTTCTTGGAGCTACAAATCGTGCCGATGTCTTAGATCCGGCCCTGCGTCGTCCTGGGAGATTTGATCGTGTTGTTACGGTGGAAACGCCAGACAAAATTGGAAGAGAATCCATTTTGAGAGTACATGTGTCAAAGAAAGAGCTTCCTTTGGGAGATGATGTCAACCTCGGTAGTATTGCCTCAATGACCACTGGTTTCACGGGGGCAGATCTTGCAAACTTGGTAAATGAGGCTGCCTTGCTAGCTGGAAGAAAGAACAAGACGAACGTTGAGAAAATTGACTTCATTCAAGCTGTGGAGCGATCAATAGCGGGCATAGAGAAGAAATCTGCAAGATTAAAAGGCAATGAGAAGGCAGTGGTCGCAAGGCATGAAGCTGGGCATGCAGTGGTTGGTACCGCTGTTGCAAATCTTCTTACTGGACAGCCACGTGTTGAGAAATTAAGCATATTGCCAAGAACAGGAGGGGCATTGGGATTTACATACATTCCTCCTACTAGTGAAGACAGATATTTACTCTTCATTGATGAGCTGCTTGGGCGTTTAGTTACCCTTCTTGGAGGTCGTGCAGCTGAAGAAGTTGTTTACTCAGGGCGTATATCAACAGGTGCATTTGATGATATAAGGCGGGCAACTGATATGGCATACAAGGCAGTAGCTGAATACGGTCTTAACCAAAAAATCGGACCTGTGTCTGTGGCTACACTTTCTGGTGGTGGGATTGACGATTCTGGAGGCTCGCCATGGGGAAGAGATCAGGGGAAACTAGTTGATCTTGTTCAAAAAGAAGTGACAATTTTGTTACAATCTGCTCTCGATGTTGCGCTGTCTGTTGTACGCGCTAATCCAGATGTATTGGAAGGGCTTGGTGCTCAACTTGAAGAGAAAGAGAAAGTAGAAGGTGAAGAACTGCAGAAGTGGTTAAGCATGGTGGTTGCACCAGAAGAACTCGCAGTCTTTGTCGAAGGAAAGCAAGAGCTTTTGCTCCCAGCACAAGCTAGCTCCAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004176 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019538 GO:0031967 GO:0031975 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA FtsH_ext Peptidase_M41

Protein Analysis

802

Amino Acids

87.8

Weight (kDa)

8.3

Isoelectric Point (pI)

38.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FtsH_ext	PF06480	149 - 258	6.3e-06	FtsH Extracellular
AAA	PF00004	361 - 494	4.3e-44	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	519 - 561	1.9e-12	AAA+ lid domain
Peptidase_M41	PF01434	580 - 772	2.1e-36	Peptidase family M41

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007746)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47060 AT5G58870
fragaria_vesca	FvH4_3g38190 FvH4_3g38190 FvH4_3g38190
malus_domestica	MD03G1074100.v1.1 MD11G1080400.v1.1
prunus_persica	Prupe.6G060800_v2.0.a1 Prupe.6G060800_v2.0.a1 Prupe.6G060800_v2.0.a1
pyrus_communis	pycom03g05990 pycom11g06770
rosa_chinensis	RchiOBHm_Chr5g0068621
rosa_laevigata	RLG00000035985
rosa_multiflora	Rmu_co8416215.1_g000001 Rmu_sc0000376.1_g000003 Rmu_sc0004721.1_g000004
rosa_roxburghii	Rroxscaffold_1G00012250
rosa_rugosa	Rorug05G0392000
rosa_samantha	Rh5AG449600 Rh5BG467800 Rh5CG489600 Rh5DG481200
rosa_wichuraiana	Rw5G041980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	974
Acc36I	ACCTGC	1 cut(s)	974
Acc65I	GGTACC	1 cut(s)	1793
AccB1I	GGYRCC	2 cut(s)	1205, 1793
AccI	GTMKAC	1 cut(s)	481
AccII	CGCG	2 cut(s)	1075, 2238
AciI	CCGC	7 cut(s)	845, 974, 1073, 1391, 1709, 1797, 2026
AclI	AACGTT	1 cut(s)	1665
AclWI	GGATC	4 cut(s)	502, 790, 1230, 1427
AcoI	YGGCCR	1 cut(s)	898
AcsI	RAATTY	5 cut(s)	17, 507, 776, 1025, 1307
AcuI	CTGAAG	2 cut(s)	1167, 1992
AcvI	CACGTG	2 cut(s)	1214, 1829
AfaI	GTAC	7 cut(s)	77, 316, 531, 849, 1521, 1795, 2235
AfiI	CCNNNNNNNGG	7 cut(s)	491, 723, 935, 1076, 1106, 1107, 1859
AflII	CTTAAG	1 cut(s)	547
AflIII	ACRYGT	3 cut(s)	1213, 1522, 1828
AgsI	TTSAA	9 cut(s)	100, 153, 231, 599, 814, 894, 1688, 2180, 2279
AhlI	ACTAGT	3 cut(s)	647, 1895, 2164
AjiI	CACGTC	1 cut(s)	1067
AjnI	CCWGG	4 cut(s)	475, 490, 567, 1450
AloI	GAACNNNNNNTCC	2 cut(s)	676, 708
Alw21I	GWGCWC	2 cut(s)	1066, 2272
Alw26I	GTCTC	3 cut(s)	148, 663, 949
Alw44I	GTGCAC	1 cut(s)	1062
AlwI	GGATC	4 cut(s)	502, 790, 1230, 1427
AlwNI	CAGNNNCTG	1 cut(s)	2057
AoxI	GGCC	4 cut(s)	725, 898, 1236, 1437
ApaLI	GTGCAC	1 cut(s)	1062
ApeKI	GCWGC	4 cut(s)	394, 1631, 1930, 1967
ApoI	RAATTY	5 cut(s)	17, 507, 776, 1025, 1307
Asp718I	GGTACC	1 cut(s)	1793
AspLEI	GCGC	3 cut(s)	412, 2224, 2240
AspS9I	GGNCC	5 cut(s)	909, 926, 1236, 1438, 2084
AsuC2I	CCSGG	2 cut(s)	729, 1101
AsuHPI	GGTGA	3 cut(s)	743, 968, 2312
AsuII	TTCGAA	1 cut(s)	15
AsuNHI	GCTAGC	2 cut(s)	1639, 2396
AvaII	GGWCC	3 cut(s)	909, 926, 2084
BaeGI	GKGCMC	1 cut(s)	1066
BaeI	ACNNNNGTAYC	2 cut(s)	1785, 1818
BanI	GGYRCC	2 cut(s)	1205, 1793
BauI	CACGAG	1 cut(s)	886
BbrPI	CACGTG	2 cut(s)	1214, 1829
BbsI	GAAGAC	2 cut(s)	1088, 1908
Bbv12I	GWGCWC	2 cut(s)	1066, 2272
BbvI	GCAGC	4 cut(s)	406, 1618, 1917, 1979
BccI	CCATC	8 cut(s)	215, 584, 617, 926, 1261, 1295, 1360, 1364
BceAI	ACGGC	1 cut(s)	1281
BciT130I	CCWGG	4 cut(s)	477, 492, 569, 1452
BclI	TGATCA	1 cut(s)	271
BcnI	CCSGG	2 cut(s)	729, 1101
BcoDI	GTCTC	3 cut(s)	148, 663, 949
BcuI	ACTAGT	3 cut(s)	647, 1895, 2164
BfaI	CTAG	9 cut(s)	288, 648, 723, 1010, 1058, 1640, 1896, 2165, 2397
BfmI	CTRYAG	2 cut(s)	167, 2309
BfrI	CTTAAG	1 cut(s)	547
BfuAI	ACCTGC	1 cut(s)	974
BglII	AGATCT	1 cut(s)	1606
BisI	GCNGC	4 cut(s)	395, 1632, 1931, 1968
BlsI	GCNGC	4 cut(s)	396, 1633, 1932, 1969
BmcAI	AGTACT	1 cut(s)	316
Bme1390I	CCNGG	6 cut(s)	477, 492, 569, 729, 1101, 1452
Bme18I	GGWCC	3 cut(s)	909, 926, 2084
BmgBI	CACGTC	1 cut(s)	1067
BmgT120I	GGNCC	5 cut(s)	909, 926, 1236, 1438, 2084
BmiI	GGNNCC	5 cut(s)	501, 693, 911, 1207, 1795
BmrFI	CCNGG	6 cut(s)	477, 492, 569, 729, 1101, 1452
BmsI	GCATC	3 cut(s)	450, 747, 1270
BmtI	GCTAGC	2 cut(s)	1643, 2400
BoxI	GACNNNNGTC	1 cut(s)	2089
BpiI	GAAGAC	2 cut(s)	1088, 1908
BpmI	CTGGAG	2 cut(s)	2151, 2386
Bpu10I	CCTNAGC	1 cut(s)	905
Bpu14I	TTCGAA	1 cut(s)	15
BpuMI	CCSGG	2 cut(s)	729, 1101
Bsa29I	ATCGAT	1 cut(s)	1256
BsaAI	YACGTR	2 cut(s)	1214, 1829
BsaJI	CCNNGG	4 cut(s)	37, 1451, 1564, 2141
BsaXI	ACNNNNNCTCC	4 cut(s)	676, 706, 1542, 1572
Bsc4I	CCNNNNNNNGG	7 cut(s)	491, 723, 935, 1076, 1106, 1107, 1859
Bse118I	RCCGGY	1 cut(s)	896
Bse1I	ACTGG	3 cut(s)	1594, 1822, 2403
Bse3DI	GCAATG	1 cut(s)	1750
BseBI	CCWGG	4 cut(s)	477, 492, 569, 1452
BseCI	ATCGAT	1 cut(s)	1256
BseDI	CCNNGG	4 cut(s)	37, 1451, 1564, 2141
BseGI	GGATG	3 cut(s)	226, 982, 1375
BseLI	CCNNNNNNNGG	7 cut(s)	491, 723, 935, 1076, 1106, 1107, 1859
BseMI	GCAATG	1 cut(s)	1750
BseMII	CTCAG	4 cut(s)	674, 780, 1353, 2001
BseNI	ACTGG	3 cut(s)	1594, 1822, 2403
BseRI	GAGGAG	1 cut(s)	308
BseSI	GKGCMC	1 cut(s)	1066
BseXI	GCAGC	4 cut(s)	406, 1618, 1917, 1979
BseYI	CCCAGC	4 cut(s)	854, 1136, 1775, 2386
BsgI	GTGCAG	2 cut(s)	593, 1986
Bsh1236I	CGCG	2 cut(s)	1075, 2238
Bsh1285I	CGRYCG	1 cut(s)	106
BshFI	GGCC	4 cut(s)	727, 900, 1238, 1439
BshNI	GGYRCC	2 cut(s)	1205, 1793
BshVI	ATCGAT	1 cut(s)	1256
BsiEI	CGRYCG	1 cut(s)	106
BsiHKAI	GWGCWC	2 cut(s)	1066, 2272
BsiSI	CCGG	5 cut(s)	320, 728, 897, 1101, 1436
BslFI	GGGAC	1 cut(s)	1136
BslI	CCNNNNNNNGG	7 cut(s)	491, 723, 935, 1076, 1106, 1107, 1859
BsmAI	GTCTC	3 cut(s)	148, 663, 949
BsmFI	GGGAC	1 cut(s)	1136
BsnI	GGCC	4 cut(s)	727, 900, 1238, 1439
Bsp119I	TTCGAA	1 cut(s)	15
Bsp1286I	GDGCHC	2 cut(s)	1066, 2272
Bsp19I	CCATGG	1 cut(s)	2141
BspACI	CCGC	7 cut(s)	845, 974, 1073, 1391, 1709, 1797, 2026
BspANI	GGCC	4 cut(s)	727, 900, 1238, 1439
BspCNI	CTCAG	4 cut(s)	673, 781, 1354, 2000
BspDI	ATCGAT	1 cut(s)	1256
BspFNI	CGCG	2 cut(s)	1075, 2238
BspLI	GGNNCC	5 cut(s)	501, 693, 911, 1207, 1795
BspMAI	CTGCAG	2 cut(s)	171, 2313
BspMI	ACCTGC	1 cut(s)	974
BspOI	GCTAGC	2 cut(s)	1643, 2400
BspPI	GGATC	4 cut(s)	502, 790, 1230, 1427
BspQI	GCTCTTC	1 cut(s)	999
BspT104I	TTCGAA	1 cut(s)	15
BspT107I	GGYRCC	2 cut(s)	1205, 1793
BspTI	CTTAAG	1 cut(s)	547
BsrDI	GCAATG	1 cut(s)	1750
BsrFI	RCCGGY	1 cut(s)	896
BsrI	ACTGG	3 cut(s)	1594, 1822, 2403
BssAI	RCCGGY	1 cut(s)	896
BssECI	CCNNGG	4 cut(s)	37, 1451, 1564, 2141
BssNAI	GTATAC	1 cut(s)	482
BssSI	CACGAG	1 cut(s)	886
BssT1I	CCWWGG	1 cut(s)	2141
Bst1107I	GTATAC	1 cut(s)	482
Bst2BI	CACGAG	1 cut(s)	886
Bst2UI	CCWGG	4 cut(s)	477, 492, 569, 1452
Bst4CI	ACNGT	7 cut(s)	187, 534, 563, 688, 747, 1477, 2066
Bst6I	CTCTTC	6 cut(s)	233, 999, 1495, 1922, 2143, 2274
BstAFI	CTTAAG	1 cut(s)	547
BstAPI	GCANNNNNTGC	1 cut(s)	1610
BstBAI	YACGTR	2 cut(s)	1214, 1829
BstBI	TTCGAA	1 cut(s)	15
BstC8I	GCNNGC	7 cut(s)	902, 1641, 1711, 1782, 2028, 2138, 2398
BstDEI	CTNAG	7 cut(s)	660, 789, 905, 1031, 1362, 1429, 1987
BstDSI	CCRYGG	2 cut(s)	37, 2141
BstF5I	GGATG	3 cut(s)	226, 982, 1375
BstFNI	CGCG	2 cut(s)	1075, 2238
BstHHI	GCGC	3 cut(s)	412, 2224, 2240
BstMAI	GTCTC	3 cut(s)	148, 663, 949
BstMCI	CGRYCG	1 cut(s)	106
BstNI	CCWGG	4 cut(s)	477, 492, 569, 1452
BstNSI	RCATGY	2 cut(s)	1526, 1784
BstPAI	GACNNNNGTC	1 cut(s)	2089
BstSCI	CCNGG	6 cut(s)	475, 490, 567, 727, 1099, 1450
BstSFI	CTRYAG	2 cut(s)	167, 2309
BstSLI	GKGCMC	1 cut(s)	1066
BstUI	CGCG	2 cut(s)	1075, 2238
BstV1I	GCAGC	4 cut(s)	406, 1618, 1917, 1979
BstV2I	GAAGAC	2 cut(s)	1088, 1908
BstX2I	RGATCY	3 cut(s)	1222, 1432, 1606
BstYI	RGATCY	3 cut(s)	1222, 1432, 1606
BstZ17I	GTATAC	1 cut(s)	482
Bsu15I	ATCGAT	1 cut(s)	1256
BsuRI	GGCC	4 cut(s)	727, 900, 1238, 1439
BsuTUI	ATCGAT	1 cut(s)	1256
BtgI	CCRYGG	2 cut(s)	37, 2141
BtrI	CACGTC	1 cut(s)	1067
BtsCI	GGATG	3 cut(s)	226, 982, 1375
BtsI	GCAGTG	3 cut(s)	395, 1761, 1791
BtsIMutI	CAGTG	6 cut(s)	192, 395, 1359, 1587, 1761, 1791
BveI	ACCTGC	1 cut(s)	974
Cac8I	GCNNGC	7 cut(s)	902, 1641, 1711, 1782, 2028, 2138, 2398
CaiI	CAGNNNCTG	1 cut(s)	2057
CfoI	GCGC	3 cut(s)	412, 2224, 2240
Cfr10I	RCCGGY	1 cut(s)	896
Cfr13I	GGNCC	5 cut(s)	909, 926, 1236, 1438, 2084
ClaI	ATCGAT	1 cut(s)	1256
CseI	GACGC	1 cut(s)	1433
CsiI	ACCWGGT	2 cut(s)	475, 567
Csp6I	GTAC	7 cut(s)	76, 315, 530, 848, 1520, 1794, 2234
CviAII	CATG	5 cut(s)	1523, 1769, 1781, 2142, 2326
CviQI	GTAC	7 cut(s)	76, 315, 530, 848, 1520, 1794, 2234
DdeI	CTNAG	7 cut(s)	660, 789, 905, 1031, 1362, 1429, 1987
DraI	TTTAAA	1 cut(s)	1347
EaeI	YGGCCR	1 cut(s)	898
Eam1104I	CTCTTC	6 cut(s)	233, 999, 1495, 1922, 2143, 2274
EarI	CTCTTC	6 cut(s)	233, 999, 1495, 1922, 2143, 2274
Eco130I	CCWWGG	1 cut(s)	2141
Eco32I	GATATC	1 cut(s)	736
Eco47I	GGWCC	3 cut(s)	909, 926, 2084
Eco57I	CTGAAG	2 cut(s)	1167, 1992
Eco72I	CACGTG	2 cut(s)	1214, 1829
EcoO109I	RGGNCCY	1 cut(s)	909
EcoRI	GAATTC	1 cut(s)	507
EcoRII	CCWGG	4 cut(s)	475, 490, 567, 1450
EcoRV	GATATC	1 cut(s)	736
EcoT14I	CCWWGG	1 cut(s)	2141
ErhI	CCWWGG	1 cut(s)	2141
FaeI	CATG	5 cut(s)	1526, 1772, 1784, 2145, 2329
FaqI	GGGAC	1 cut(s)	1136
FatI	CATG	5 cut(s)	1522, 1768, 1780, 2141, 2325
FauI	CCCGC	2 cut(s)	1702, 2019
FbaI	TGATCA	1 cut(s)	271
FblI	GTMKAC	1 cut(s)	481
Fnu4HI	GCNGC	4 cut(s)	395, 1632, 1931, 1968
FokI	GGATG	3 cut(s)	233, 989, 1382
Fsp4HI	GCNGC	4 cut(s)	395, 1632, 1931, 1968
FspBI	CTAG	9 cut(s)	288, 648, 723, 1010, 1058, 1640, 1896, 2165, 2397
GlaI	GCGC	3 cut(s)	411, 2223, 2239
GluI	GCNGC	4 cut(s)	395, 1632, 1931, 1968
GsaI	CCCAGC	4 cut(s)	858, 1140, 1779, 2390
GsuI	CTGGAG	2 cut(s)	2151, 2386
HaeIII	GGCC	4 cut(s)	727, 900, 1238, 1439
HapII	CCGG	5 cut(s)	320, 728, 897, 1101, 1436
HgaI	GACGC	1 cut(s)	1433
HhaI	GCGC	3 cut(s)	412, 2224, 2240
Hin1II	CATG	5 cut(s)	1526, 1772, 1784, 2145, 2329
Hin6I	GCGC	3 cut(s)	410, 2222, 2238
HinP1I	GCGC	3 cut(s)	410, 2222, 2238
HincII	GTYRAC	2 cut(s)	559, 1561
HindII	GTYRAC	2 cut(s)	559, 1561
HindIII	AAGCTT	1 cut(s)	84
HinfI	GANTC	7 cut(s)	33, 133, 671, 867, 1036, 1505, 2126
HpaI	GTTAAC	1 cut(s)	559
HpaII	CCGG	5 cut(s)	320, 728, 897, 1101, 1436
HphI	GGTGA	3 cut(s)	743, 968, 2312
Hpy166II	GTNNAC	6 cut(s)	482, 530, 559, 1064, 1561, 1984
Hpy188I	TCNGA	9 cut(s)	132, 276, 312, 331, 499, 513, 670, 1313, 2084
Hpy188III	TCNNGA	9 cut(s)	90, 200, 231, 263, 929, 1040, 2130, 2213, 2246
Hpy8I	GTNNAC	6 cut(s)	482, 530, 559, 1064, 1561, 1984
Hpy99I	CGWCG	1 cut(s)	1449
HpyAV	CCTTC	8 cut(s)	1127, 1165, 1237, 1744, 1961, 2252, 2291, 2357
HpyCH4III	ACNGT	7 cut(s)	187, 534, 563, 688, 747, 1477, 2066
HpyCH4IV	ACGT	4 cut(s)	1066, 1213, 1665, 1828
HpyF3I	CTNAG	7 cut(s)	660, 789, 905, 1031, 1362, 1429, 1987
HpySE526I	ACGT	4 cut(s)	1066, 1213, 1665, 1828
Hsp92II	CATG	5 cut(s)	1526, 1772, 1784, 2145, 2329
HspAI	GCGC	3 cut(s)	410, 2222, 2238
KpnI	GGTACC	1 cut(s)	1797
Ksp22I	TGATCA	1 cut(s)	271
KspAI	GTTAAC	1 cut(s)	559
LguI	GCTCTTC	1 cut(s)	999
LmnI	GCTCC	9 cut(s)	499, 697, 1255, 1320, 1336, 1406, 1696, 2388, 2405
Lsp1109I	GCAGC	4 cut(s)	406, 1618, 1917, 1979
LweI	GCATC	3 cut(s)	450, 747, 1270
MabI	ACCWGGT	2 cut(s)	475, 567
MaeI	CTAG	9 cut(s)	288, 648, 723, 1010, 1058, 1640, 1896, 2165, 2397
MaeII	ACGT	4 cut(s)	1066, 1213, 1665, 1828
MaeIII	GTNAC	6 cut(s)	181, 563, 1471, 1945, 2188, 2199
MfeI	CAATTG	1 cut(s)	437
MflI	RGATCY	3 cut(s)	1222, 1432, 1606
MhlI	GDGCHC	2 cut(s)	1066, 2272
MmeI	TCCRAC	1 cut(s)	309
MslI	CAYNNNNRTG	1 cut(s)	1364
MspA1I	CMGCKG	2 cut(s)	1799, 1970
MspCI	CTTAAG	1 cut(s)	547
MspI	CCGG	5 cut(s)	320, 728, 897, 1101, 1436
MspR9I	CCNGG	6 cut(s)	477, 492, 569, 729, 1101, 1452
MunI	CAATTG	1 cut(s)	437
MvaI	CCWGG	4 cut(s)	477, 492, 569, 1452
MvnI	CGCG	2 cut(s)	1075, 2238
NciI	CCSGG	2 cut(s)	729, 1101
NcoI	CCATGG	1 cut(s)	2141
NheI	GCTAGC	2 cut(s)	1639, 2396
NlaIII	CATG	5 cut(s)	1526, 1772, 1784, 2145, 2329
NlaIV	GGNNCC	5 cut(s)	501, 693, 911, 1207, 1795
NmuCI	GTSAC	1 cut(s)	2188
NspI	RCATGY	2 cut(s)	1526, 1784
NspV	TTCGAA	1 cut(s)	15
PaeI	GCATGC	1 cut(s)	1784
PaqCI	CACCTGC	1 cut(s)	974
PciI	ACATGT	1 cut(s)	1522
PciSI	GCTCTTC	1 cut(s)	999
PcsI	WCGNNNNNNNCGW	3 cut(s)	86, 671, 1072
PfeI	GAWTC	7 cut(s)	33, 133, 671, 867, 1036, 1505, 2126
PfoI	TCCNGGA	1 cut(s)	1099
PkrI	GCNGC	4 cut(s)	396, 1633, 1932, 1969
Ple19I	CGATCG	1 cut(s)	106
PmaCI	CACGTG	2 cut(s)	1214, 1829
PmlI	CACGTG	2 cut(s)	1214, 1829
Ppu21I	YACGTR	2 cut(s)	1214, 1829
PpuMI	RGGWCCY	1 cut(s)	909
PscI	ACATGT	1 cut(s)	1522
PshAI	GACNNNNGTC	1 cut(s)	2089
Psp1406I	AACGTT	1 cut(s)	1665
Psp5II	RGGWCCY	1 cut(s)	909
Psp6I	CCWGG	4 cut(s)	475, 490, 567, 1450
PspCI	CACGTG	2 cut(s)	1214, 1829
PspFI	CCCAGC	4 cut(s)	854, 1136, 1775, 2386
PspGI	CCWGG	4 cut(s)	475, 490, 567, 1450
PspN4I	GGNNCC	5 cut(s)	501, 693, 911, 1207, 1795
PspPI	GGNCC	5 cut(s)	909, 926, 1236, 1438, 2084
PspPPI	RGGWCCY	1 cut(s)	909
PsrI	GAACNNNNNNTAC	2 cut(s)	527, 559
PstI	CTGCAG	2 cut(s)	171, 2313
PstNI	CAGNNNCTG	1 cut(s)	2057
PsuI	RGATCY	3 cut(s)	1222, 1432, 1606
PvuI	CGATCG	1 cut(s)	106
PvuII	CAGCTG	1 cut(s)	1970
RsaI	GTAC	7 cut(s)	77, 316, 531, 849, 1521, 1795, 2235
RsaNI	GTAC	7 cut(s)	76, 315, 530, 848, 1520, 1794, 2234
RseI	CAYNNNNRTG	1 cut(s)	1364
SapI	GCTCTTC	1 cut(s)	999
SatI	GCNGC	4 cut(s)	395, 1632, 1931, 1968
Sau96I	GGNCC	5 cut(s)	909, 926, 1236, 1438, 2084
ScaI	AGTACT	1 cut(s)	316
ScrFI	CCNGG	6 cut(s)	477, 492, 569, 729, 1101, 1452
SduI	GDGCHC	2 cut(s)	1066, 2272
SexAI	ACCWGGT	2 cut(s)	475, 567
SfaNI	GCATC	3 cut(s)	450, 747, 1270
SfcI	CTRYAG	2 cut(s)	167, 2309
SfuI	TTCGAA	1 cut(s)	15
SinI	GGWCC	3 cut(s)	909, 926, 2084
SmiMI	CAYNNNNRTG	1 cut(s)	1364
SmlI	CTYRAG	1 cut(s)	547
SmoI	CTYRAG	1 cut(s)	547
SpeI	ACTAGT	3 cut(s)	647, 1895, 2164
SphI	GCATGC	1 cut(s)	1784
SsiI	CCGC	7 cut(s)	845, 974, 1073, 1391, 1709, 1797, 2026
SspMI	CTAG	9 cut(s)	288, 648, 723, 1010, 1058, 1640, 1896, 2165, 2397
StyD4I	CCNGG	6 cut(s)	475, 490, 567, 727, 1099, 1450
StyI	CCWWGG	1 cut(s)	2141
TaaI	ACNGT	7 cut(s)	187, 534, 563, 688, 747, 1477, 2066
TaiI	ACGT	4 cut(s)	1069, 1216, 1668, 1831
TaqI	TCGA	9 cut(s)	15, 80, 89, 472, 505, 865, 1256, 2214, 2361
TatI	WGTACW	3 cut(s)	75, 314, 1519
TfiI	GAWTC	7 cut(s)	33, 133, 671, 867, 1036, 1505, 2126
TscAI	CASTG	6 cut(s)	192, 395, 1366, 1594, 1761, 1791
TseFI	GTSAC	1 cut(s)	2188
TseI	GCWGC	4 cut(s)	394, 1631, 1930, 1967
Tsp45I	GTSAC	1 cut(s)	2188
TspDTI	ATGAA	6 cut(s)	1008, 1147, 1344, 1672, 1785, 1909
TspGWI	ACGGA	2 cut(s)	54, 1043
TspRI	CASTG	6 cut(s)	192, 395, 1366, 1594, 1761, 1791
Vha464I	CTTAAG	1 cut(s)	547
VneI	GTGCAC	1 cut(s)	1062
VpaK11BI	GGWCC	3 cut(s)	909, 926, 2084
XapI	RAATTY	5 cut(s)	17, 507, 776, 1025, 1307
XceI	RCATGY	2 cut(s)	1526, 1784
XmiI	GTMKAC	1 cut(s)	481
XspI	CTAG	9 cut(s)	288, 648, 723, 1010, 1058, 1640, 1896, 2165, 2397
ZrmI	AGTACT	1 cut(s)	316

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.