Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0007746

Physical Location & Seq

Genomic Coordinates Forward (+)

74497360 .. 74501935

Gene Structure 4576 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000035985

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2460 bp

ATGTCATCGGCGGTGGAGTATTTACGTCCGACAATCCACACTCGGTTCTGCTTGAACTCCAATTCAAATCTCCGTCACTGCAGTAATGGATTGGGCTTCTTCTTCCTCCGCGGCGCCCAGTCTAGGGTTTTCAGTCCCGACGTGAAACGCTGCGTTTCGGCGGCGCCGTTCCCGAAGGTTGCGAGGGTCTCCGAGAAAAGGTTCGGGCATGTGGGAGGTTACAATGGAGGAGGGTTCAGGACGGTTAGGGTTTTGGCGAACGAGCCGGAGAGCGATTCTGGGGAGAAGAGCGAGGCCAGCGAGGGGCAGGGTGTGAATGGCCAGACGCCGAGTCCGAGTCCGAGCTCGTCGCCGGCGGCGTCGAATCCGAGAAGAGGAGAGAGGCAGAAGAAGAAAGAGAGCTGGTGGTTTTCGAAAGGAGGGAAATGGAAGTGGCAGCCGATTGTTCAGGCCCAGGAGATTGGGATTCTGCTGTTGCAGTTGGGGATTGTTATTTTCGTTATGAGGTTGCTCCGGCCCGGAATTCCGTTGCCCGGGTCCGACCCGAGGCCGCCGACGACGTTTATTAGTGTGCCGTATAGTGACTTTTTGAGTAAGATTAATACTAACCAGGTGCAGAAGGTGGAGGTTGATGGGGTTCATGTTATGTTTAAGCTCAAGTCGGAGCCGGCGGGTGAGGTGGAGAGTGAAACGAATGGTGCCAGTAAGTTTCAGGAGTCGGAGGCTTTGATAAGAAGTGTGGCTCCGACGAGGAGGGTGGTATATACGACCACGAGGCCGACTGATATCAAGACGCCGTATGAGAAGATGCTTGAGAATGAGGTGGAGTTTGGGTCGCCGGATAAGCGCTCCGGCGGATTCATGAACTCTGCGATGATAGCTTTGTTTTATGTTGCTGTGCTTGCAGGGCTTCTCCACAGGTTCCCTGTAAGCTTTTCTCAGCATACGGCTGGTCAGATTAGGAATAGAAAACCTGGGGGCTCTGGTGGTGCCAAAACCTCTGAACCCTCGGAAGCAATAACCTTTGCTGATGTTGCTGGTGTTGACGAGGCTAAGGAGGAGCTAGAGGAAATTGTGGAATTTCTTCGGAATCCAGACAGGTATATACGACTTGGTGCTCGTCCTCCCCGTGGTGTTCTGCTGGTGGGTCTTCCTGGGACAGGTAAGACTCTTCTTGCAAAGGCTGTGGCTGGGGAAGCTGAAGTACCCTTTATAAGTTGCTCTGCTAGTGAGTTCGTAGAGCTCTATGTGGGCATGGGTGCCTCTCGTGTAAGGGACCTATTTGCACGGGCCAAAAAGGAAGCACCGTCAATAATATTTATTGATGAGATAGATGCTGTGGCAAAAAGTCGTGATGGAAAACACCGCATTGTCAGCAATGACGAGAGAGAACAAACATTGAATCAGTTGCTCACTGAGATGGATGGGTTTGACAGCAACTCTGCGGTTATTGTTCTTGGAGCTACTAATCGCGCAGATGTTTTAGACCCGGCACTTCGTCGACCAGGGAGATTTGATCGTGTAGTTATGGTGGAAACGCCTGATAGGATTGGAAGAGAATCAATTCTCAAAGTGCATGTTTCCAAAAAGGAACTTCCTTTAGCTAAAGATGTTTACCTTGGTGACATTGCTTCTATGACCACAGGCTTTACTGGGGCTGATCTTGCAAATTTGGTGAATGAAGCTGCTTTGTTGGCTGGAAGACAAAGCAAGGTGGTTGTGGAAAAGATTGATTTCATTCAGGCTGTGGAGAGATCAATAGCTGGAATTGAAAAGAAGACTGCCAAGTTGCAGGGATGTGAGAAGGGTGTAGTTGCACGACATGAAGCTGGTCATGCAGTTGTAGGGACAGCTATTGCAAGTCTTGTTGCTGGACAGCCACGTGTGGAGAAATTGAGCATATTGCCAAGGACAGGGGGGGCATTGGGTTTTACTTACACTCCTCCAGCGACTGAAGATAGATATTTACTATTCATTGATGAGTTGCGTGGACGTTTGGTTACGCTTCTAGGAGGACGCGCAGCAGAGGAGTTTGTATATTCAGGTCGTGTATCAACTGGTGCGCTTGATGACATACGGCGAGCCACGGAAATGGCATATAAAGCAGTATCTGAGTATGGTCTTAATGAGAACATTGGCCCTGTGTCTATAGCAACACTTTCTGCTGGTGGAATGGATGAGTCGGGGGGACTTTTTGGAAGGGATCAGGGACACCTTGTTAATCTTGCTCAACGAGAGACTCAAGAATTGCTGCAATCTGCTATGGAGGTAGCCCTTTGTGTTGTACGTGCTAATCCTGTTGTTTTGGAGGGCCTTGGTGCTCATTTGGAAGAAAAAGAGAAAGTAGAAGGTGAAGAGCTACACAAGTGGTTAAAATTGGTGGTTGCACCAGCAGAACTTGCTGCCTTCATTAAAGGCAAGCAACAGGCCCTTCTTCCATTGCAGACCACCTCTGGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004176 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019538 GO:0031967 GO:0031975 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA FtsH_ext Peptidase_M41

Protein Analysis

820

Amino Acids

88.74

Weight (kDa)

8.47

Isoelectric Point (pI)

39.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA	PF00004	379 - 512	1.1e-43	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	537 - 579	3.8e-10	AAA+ lid domain
Peptidase_M41	PF01434	600 - 788	1.1e-32	Peptidase family M41

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007746)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47060 AT5G58870
fragaria_vesca	FvH4_3g38190 FvH4_3g38190 FvH4_3g38190
malus_domestica	MD03G1074100.v1.1 MD11G1080400.v1.1
prunus_persica	Prupe.6G060800_v2.0.a1 Prupe.6G060800_v2.0.a1 Prupe.6G060800_v2.0.a1
pyrus_communis	pycom03g05990 pycom11g06770
rosa_chinensis	RchiOBHm_Chr5g0068621
rosa_laevigata	RLG00000035985
rosa_multiflora	Rmu_co8416215.1_g000001 Rmu_sc0000376.1_g000003 Rmu_sc0004721.1_g000004
rosa_roxburghii	Rroxscaffold_1G00012250
rosa_rugosa	Rorug05G0392000
rosa_samantha	Rh5AG449600 Rh5BG467800 Rh5CG489600 Rh5DG481200
rosa_wichuraiana	Rw5G041980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1214
AccB1I	GGYRCC	5 cut(s)	113, 163, 698, 989, 1259
AccI	GTMKAC	1 cut(s)	1501
AccII	CGCG	3 cut(s)	111, 1473, 2019
AclWI	GGATC	1 cut(s)	2211
AcoI	YGGCCR	1 cut(s)	319
AcsI	RAATTY	3 cut(s)	522, 1079, 1669
AcuI	CTGAAG	2 cut(s)	1221, 1974
AcvI	CACGTG	1 cut(s)	1883
AcyI	GRCGYC	5 cut(s)	114, 164, 326, 359, 794
AfaI	GTAC	2 cut(s)	1206, 2286
AfeI	AGCGCT	1 cut(s)	848
AflIII	ACRYGT	1 cut(s)	1882
AgsI	TTSAA	4 cut(s)	55, 66, 1402, 1772
AhdI	GACNNNNNGTC	1 cut(s)	330
AjiI	CACGTC	1 cut(s)	142
AjnI	CCWGG	5 cut(s)	453, 609, 973, 1153, 1504
Alw21I	GWGCWC	4 cut(s)	347, 1120, 1245, 2323
Alw26I	GTCTC	2 cut(s)	193, 2231
AlwI	GGATC	1 cut(s)	2211
AlwNI	CAGNNNCTG	2 cut(s)	1952, 2111
Ama87I	CYCGRG	2 cut(s)	533, 544
Aor51HI	AGCGCT	1 cut(s)	848
ApeKI	GCWGC	6 cut(s)	150, 436, 1685, 2021, 2251, 2402
ApoI	RAATTY	3 cut(s)	522, 1079, 1669
AseI	ATTAAT	1 cut(s)	600
Asp700I	GAANNNNTTC	3 cut(s)	200, 1083, 1563
AspLEI	GCGC	6 cut(s)	116, 166, 849, 1475, 2021, 2065
AspS9I	GGNCC	8 cut(s)	451, 516, 537, 1276, 1290, 2138, 2311, 2428
AsuC2I	CCSGG	4 cut(s)	519, 534, 535, 1490
AsuHPI	GGTGA	4 cut(s)	686, 1634, 1687, 2363
AsuII	TTCGAA	1 cut(s)	413
AvaI	CYCGRG	2 cut(s)	533, 544
AvaII	GGWCC	2 cut(s)	537, 1276
BalI	TGGCCA	1 cut(s)	321
BanI	GGYRCC	5 cut(s)	113, 163, 698, 989, 1259
BanII	GRGCYC	3 cut(s)	347, 983, 1245
BarI	GAAGNNNNNNTAC	2 cut(s)	1188, 1220
BauI	CACGAG	2 cut(s)	772, 1266
BbrPI	CACGTG	1 cut(s)	1883
BbsI	GAAGAC	3 cut(s)	1142, 1708, 1784
Bbv12I	GWGCWC	4 cut(s)	347, 1120, 1245, 2323
BbvI	GCAGC	6 cut(s)	137, 448, 1672, 2033, 2238, 2389
BccI	CCATC	4 cut(s)	626, 1349, 1414, 1418
BceAI	ACGGC	5 cut(s)	151, 559, 781, 963, 2093
BciT130I	CCWGG	5 cut(s)	455, 611, 975, 1155, 1506
BcnI	CCSGG	4 cut(s)	519, 534, 535, 1490
BcoDI	GTCTC	2 cut(s)	193, 2231
BfaI	CTAG	4 cut(s)	123, 1064, 1227, 2009
BfmI	CTRYAG	2 cut(s)	79, 2148
BfoI	RGCGCY	3 cut(s)	117, 167, 850
Bme1390I	CCNGG	9 cut(s)	455, 519, 534, 535, 611, 975, 1155, 1490, 1506
Bme18I	GGWCC	2 cut(s)	537, 1276
BmeRI	GACNNNNNGTC	1 cut(s)	330
BmeT110I	CYCGRG	2 cut(s)	533, 544
BmgBI	CACGTC	1 cut(s)	142
BmgT120I	GGNCC	8 cut(s)	451, 516, 537, 1276, 1290, 2138, 2311, 2428
BmrFI	CCNGG	9 cut(s)	455, 519, 534, 535, 611, 975, 1155, 1490, 1506
BmrI	ACTGGG	2 cut(s)	112, 1662
BmsI	GCATC	2 cut(s)	798, 1324
BmuI	ACTGGG	2 cut(s)	112, 1662
BpiI	GAAGAC	3 cut(s)	1142, 1708, 1784
BpmI	CTGGAG	1 cut(s)	1929
Bpu10I	CCTNAGC	1 cut(s)	1053
Bpu14I	TTCGAA	1 cut(s)	413
BpuEI	CTTGAG	3 cut(s)	641, 833, 2226
BpuMI	CCSGG	4 cut(s)	519, 534, 535, 1490
BsaAI	YACGTR	2 cut(s)	1883, 2288
BsaHI	GRCGYC	5 cut(s)	114, 164, 326, 359, 794
BsaI	GGTCTC	1 cut(s)	193
BsaXI	ACNNNNNCTCC	4 cut(s)	818, 848, 1924, 1954
Bse118I	RCCGGY	2 cut(s)	352, 667
Bse1I	ACTGG	4 cut(s)	118, 702, 1657, 2062
Bse3DI	GCAATG	3 cut(s)	1384, 1626, 2438
BseBI	CCWGG	5 cut(s)	455, 611, 975, 1155, 1506
BseGI	GGATG	3 cut(s)	1429, 1802, 2182
BseMI	GCAATG	3 cut(s)	1384, 1626, 2438
BseMII	CTCAG	3 cut(s)	953, 1407, 2103
BseNI	ACTGG	4 cut(s)	118, 702, 1657, 2062
BseRI	GAGGAG	6 cut(s)	243, 390, 766, 1073, 1932, 2042
BseXI	GCAGC	6 cut(s)	137, 448, 1672, 2033, 2238, 2389
BseYI	CCCAGC	1 cut(s)	1190
BsgI	GTGCAG	1 cut(s)	635
Bsh1236I	CGCG	3 cut(s)	111, 1473, 2019
BshNI	GGYRCC	5 cut(s)	113, 163, 698, 989, 1259
BsiHKAI	GWGCWC	4 cut(s)	347, 1120, 1245, 2323
BsiHKCI	CYCGRG	2 cut(s)	533, 544
BsiSI	CCGG	9 cut(s)	266, 353, 514, 519, 534, 668, 839, 852, 1490
BslFI	GGGAC	6 cut(s)	120, 1171, 1289, 1861, 2202, 2223
BsmAI	GTCTC	2 cut(s)	193, 2231
BsmFI	GGGAC	6 cut(s)	120, 1171, 1289, 1861, 2202, 2223
Bso31I	GGTCTC	1 cut(s)	193
BsoBI	CYCGRG	2 cut(s)	533, 544
Bsp119I	TTCGAA	1 cut(s)	413
Bsp1286I	GDGCHC	5 cut(s)	347, 983, 1120, 1245, 2323
Bsp143I	GATC	4 cut(s)	1516, 1660, 1754, 2203
BspCNI	CTCAG	3 cut(s)	952, 1408, 2104
BspFNI	CGCG	3 cut(s)	111, 1473, 2019
BspHI	TCATGA	1 cut(s)	861
BspMAI	CTGCAG	1 cut(s)	83
BspPI	GGATC	1 cut(s)	2211
BspQI	GCTCTTC	2 cut(s)	281, 2349
BspT104I	TTCGAA	1 cut(s)	413
BspT107I	GGYRCC	5 cut(s)	113, 163, 698, 989, 1259
BspTNI	GGTCTC	1 cut(s)	193
BsrDI	GCAATG	3 cut(s)	1384, 1626, 2438
BsrFI	RCCGGY	2 cut(s)	352, 667
BsrI	ACTGG	4 cut(s)	118, 702, 1657, 2062
BssAI	RCCGGY	2 cut(s)	352, 667
BssMI	GATC	4 cut(s)	1516, 1660, 1754, 2203
BssNI	GRCGYC	5 cut(s)	114, 164, 326, 359, 794
BssSI	CACGAG	2 cut(s)	772, 1266
BssT1I	CCWWGG	3 cut(s)	1618, 1907, 2314
Bst2BI	CACGAG	2 cut(s)	772, 1266
Bst2UI	CCWGG	5 cut(s)	455, 611, 975, 1155, 1506
Bst4CI	ACNGT	2 cut(s)	244, 1308
Bst6I	CTCTTC	5 cut(s)	281, 367, 1176, 1549, 2349
BstACI	GRCGYC	5 cut(s)	114, 164, 326, 359, 794
BstAPI	GCANNNNNTGC	1 cut(s)	2399
BstBAI	YACGTR	2 cut(s)	1883, 2288
BstBI	TTCGAA	1 cut(s)	413
BstC8I	GCNNGC	6 cut(s)	298, 354, 669, 903, 2082, 2420
BstDEI	CTNAG	4 cut(s)	939, 1053, 1416, 2112
BstDSI	CCRYGG	3 cut(s)	109, 1129, 2085
BstENI	CCTNNNNNAGG	1 cut(s)	1158
BstF5I	GGATG	3 cut(s)	1429, 1802, 2182
BstFNI	CGCG	3 cut(s)	111, 1473, 2019
BstH2I	RGCGCY	3 cut(s)	117, 167, 850
BstHHI	GCGC	6 cut(s)	116, 166, 849, 1475, 2021, 2065
BstKTI	GATC	4 cut(s)	1519, 1663, 1757, 2206
BstMAI	GTCTC	2 cut(s)	193, 2231
BstMBI	GATC	4 cut(s)	1516, 1660, 1754, 2203
BstNI	CCWGG	5 cut(s)	455, 611, 975, 1155, 1506
BstNSI	RCATGY	2 cut(s)	212, 1580
BstSCI	CCNGG	9 cut(s)	453, 517, 532, 533, 609, 973, 1153, 1488, 1504
BstSFI	CTRYAG	2 cut(s)	79, 2148
BstUI	CGCG	3 cut(s)	111, 1473, 2019
BstV1I	GCAGC	6 cut(s)	137, 448, 1672, 2033, 2238, 2389
BstV2I	GAAGAC	3 cut(s)	1142, 1708, 1784
BstXI	CCANNNNNNTGG	2 cut(s)	461, 2092
BtgI	CCRYGG	3 cut(s)	109, 1129, 2085
BtgZI	GCGATG	1 cut(s)	887
BtrI	CACGTC	1 cut(s)	142
BtsCI	GGATG	3 cut(s)	1429, 1802, 2182
BtsI	GCAGTG	1 cut(s)	76
BtsIMutI	CAGTG	2 cut(s)	76, 1413
Cac8I	GCNNGC	6 cut(s)	298, 354, 669, 903, 2082, 2420
CaiI	CAGNNNCTG	2 cut(s)	1952, 2111
CciI	TCATGA	1 cut(s)	861
CfoI	GCGC	6 cut(s)	116, 166, 849, 1475, 2021, 2065
Cfr10I	RCCGGY	2 cut(s)	352, 667
Cfr13I	GGNCC	8 cut(s)	451, 516, 537, 1276, 1290, 2138, 2311, 2428
Cfr42I	CCGCGG	1 cut(s)	112
Cfr9I	CCCGGG	1 cut(s)	533
CseI	GACGC	4 cut(s)	334, 348, 802, 2025
CsiI	ACCWGGT	1 cut(s)	609
Csp6I	GTAC	2 cut(s)	1205, 2285
CspCI	CAANNNNNGTGG	2 cut(s)	1167, 1202
CviAII	CATG	7 cut(s)	209, 641, 862, 1255, 1577, 1823, 1835
CviQI	GTAC	2 cut(s)	1205, 2285
DdeI	CTNAG	4 cut(s)	939, 1053, 1416, 2112
DinI	GGCGCC	2 cut(s)	115, 165
DpnI	GATC	4 cut(s)	1518, 1662, 1756, 2205
DpnII	GATC	4 cut(s)	1516, 1660, 1754, 2203
DriI	GACNNNNNGTC	1 cut(s)	330
EaeI	YGGCCR	1 cut(s)	319
Eam1104I	CTCTTC	5 cut(s)	281, 367, 1176, 1549, 2349
Eam1105I	GACNNNNNGTC	1 cut(s)	330
EarI	CTCTTC	5 cut(s)	281, 367, 1176, 1549, 2349
EciI	GGCGGA	1 cut(s)	870
Ecl136II	GAGCTC	2 cut(s)	345, 1243
Eco130I	CCWWGG	3 cut(s)	1618, 1907, 2314
Eco24I	GRGCYC	3 cut(s)	347, 983, 1245
Eco31I	GGTCTC	1 cut(s)	193
Eco32I	GATATC	1 cut(s)	787
Eco47I	GGWCC	2 cut(s)	537, 1276
Eco47III	AGCGCT	1 cut(s)	848
Eco53kI	GAGCTC	2 cut(s)	345, 1243
Eco57I	CTGAAG	2 cut(s)	1221, 1974
Eco72I	CACGTG	1 cut(s)	1883
Eco88I	CYCGRG	2 cut(s)	533, 544
EcoICRI	GAGCTC	2 cut(s)	345, 1243
EcoNI	CCTNNNNNAGG	1 cut(s)	1158
EcoO109I	RGGNCCY	3 cut(s)	1276, 2311, 2428
EcoRI	GAATTC	1 cut(s)	522
EcoRII	CCWGG	5 cut(s)	453, 609, 973, 1153, 1504
EcoRV	GATATC	1 cut(s)	787
EcoT14I	CCWWGG	3 cut(s)	1618, 1907, 2314
EcoT38I	GRGCYC	3 cut(s)	347, 983, 1245
EgeI	GGCGCC	2 cut(s)	115, 165
EheI	GGCGCC	2 cut(s)	115, 165
ErhI	CCWWGG	3 cut(s)	1618, 1907, 2314
FaeI	CATG	7 cut(s)	212, 644, 865, 1258, 1580, 1826, 1838
FaqI	GGGAC	6 cut(s)	120, 1171, 1289, 1861, 2202, 2223
FatI	CATG	7 cut(s)	208, 640, 861, 1254, 1576, 1822, 1834
FauI	CCCGC	1 cut(s)	664
FblI	GTMKAC	1 cut(s)	1501
FokI	GGATG	3 cut(s)	1436, 1809, 2189
FriOI	GRGCYC	3 cut(s)	347, 983, 1245
FspBI	CTAG	4 cut(s)	123, 1064, 1227, 2009
GlaI	GCGC	6 cut(s)	115, 165, 848, 1474, 2020, 2064
GsaI	CCCAGC	1 cut(s)	1194
GsuI	CTGGAG	1 cut(s)	1929
HaeII	RGCGCY	3 cut(s)	117, 167, 850
HapII	CCGG	9 cut(s)	266, 353, 514, 519, 534, 668, 839, 852, 1490
HgaI	GACGC	4 cut(s)	334, 348, 802, 2025
HhaI	GCGC	6 cut(s)	116, 166, 849, 1475, 2021, 2065
Hin1I	GRCGYC	5 cut(s)	114, 164, 326, 359, 794
Hin1II	CATG	7 cut(s)	212, 644, 865, 1258, 1580, 1826, 1838
Hin6I	GCGC	6 cut(s)	114, 164, 847, 1473, 2019, 2063
HinP1I	GCGC	6 cut(s)	114, 164, 847, 1473, 2019, 2063
HincII	GTYRAC	2 cut(s)	1045, 1502
HindII	GTYRAC	2 cut(s)	1045, 1502
HindIII	AAGCTT	1 cut(s)	931
HpaII	CCGG	9 cut(s)	266, 353, 514, 519, 534, 668, 839, 852, 1490
HphI	GGTGA	4 cut(s)	686, 1634, 1687, 2363
Hpy166II	GTNNAC	4 cut(s)	1045, 1502, 1615, 1991
Hpy188III	TCNNGA	9 cut(s)	137, 172, 238, 713, 790, 862, 1094, 1352, 2243
Hpy8I	GTNNAC	4 cut(s)	1045, 1502, 1615, 1991
Hpy99I	CGWCG	7 cut(s)	143, 352, 364, 559, 562, 751, 1503
HpyAV	CCTTC	7 cut(s)	169, 613, 1798, 2193, 2342, 2416, 2441
HpyCH4III	ACNGT	2 cut(s)	244, 1308
HpyCH4IV	ACGT	6 cut(s)	25, 141, 560, 1882, 1993, 2287
HpyF3I	CTNAG	4 cut(s)	939, 1053, 1416, 2112
HpySE526I	ACGT	6 cut(s)	25, 141, 560, 1882, 1993, 2287
Hsp92I	GRCGYC	5 cut(s)	114, 164, 326, 359, 794
Hsp92II	CATG	7 cut(s)	212, 644, 865, 1258, 1580, 1826, 1838
HspAI	GCGC	6 cut(s)	114, 164, 847, 1473, 2019, 2063
KasI	GGCGCC	2 cut(s)	113, 163
KroI	GCCGGC	2 cut(s)	352, 667
KroNI	GCCGGC	2 cut(s)	354, 669
KspI	CCGCGG	1 cut(s)	112
Kzo9I	GATC	4 cut(s)	1516, 1660, 1754, 2203
LguI	GCTCTTC	2 cut(s)	281, 2349
LmnI	GCTCC	6 cut(s)	516, 664, 748, 854, 1060, 1460
Lsp1109I	GCAGC	6 cut(s)	137, 448, 1672, 2033, 2238, 2389
LweI	GCATC	2 cut(s)	798, 1324
MabI	ACCWGGT	1 cut(s)	609
MaeI	CTAG	4 cut(s)	123, 1064, 1227, 2009
MaeII	ACGT	6 cut(s)	25, 141, 560, 1882, 1993, 2287
MaeIII	GTNAC	5 cut(s)	74, 218, 581, 1622, 1999
MalI	GATC	4 cut(s)	1518, 1662, 1756, 2205
MboI	GATC	4 cut(s)	1516, 1660, 1754, 2203
MhlI	GDGCHC	5 cut(s)	347, 983, 1120, 1245, 2323
MlsI	TGGCCA	1 cut(s)	321
MluNI	TGGCCA	1 cut(s)	321
Mly113I	GGCGCC	2 cut(s)	114, 164
MlyI	GAGTC	6 cut(s)	340, 346, 725, 1162, 2189, 2233
MmeI	TCCRAC	5 cut(s)	53, 564, 642, 699, 770
Mox20I	TGGCCA	1 cut(s)	321
MreI	CGCCGGCG	1 cut(s)	352
MroNI	GCCGGC	2 cut(s)	352, 667
MroXI	GAANNNNTTC	3 cut(s)	200, 1083, 1563
MscI	TGGCCA	1 cut(s)	321
MseI	TTAA	7 cut(s)	600, 651, 2124, 2220, 2372, 2412, 2458
MslI	CAYNNNNRTG	2 cut(s)	1418, 2090
Msp20I	TGGCCA	1 cut(s)	321
MspA1I	CMGCKG	1 cut(s)	111
MspI	CCGG	9 cut(s)	266, 353, 514, 519, 534, 668, 839, 852, 1490
MspR9I	CCNGG	9 cut(s)	455, 519, 534, 535, 611, 975, 1155, 1490, 1506
MvaI	CCWGG	5 cut(s)	455, 611, 975, 1155, 1506
MvnI	CGCG	3 cut(s)	111, 1473, 2019
NaeI	GCCGGC	2 cut(s)	354, 669
NarI	GGCGCC	2 cut(s)	114, 164
NciI	CCSGG	4 cut(s)	519, 534, 535, 1490
NdeII	GATC	4 cut(s)	1516, 1660, 1754, 2203
NgoMIV	GCCGGC	2 cut(s)	352, 667
NlaIII	CATG	7 cut(s)	212, 644, 865, 1258, 1580, 1826, 1838
NmeAIII	GCCGAG	1 cut(s)	354
NmuCI	GTSAC	3 cut(s)	74, 581, 1622
NspI	RCATGY	2 cut(s)	212, 1580
NspV	TTCGAA	1 cut(s)	413
PagI	TCATGA	1 cut(s)	861
PciSI	GCTCTTC	2 cut(s)	281, 2349
PcsI	WCGNNNNNNNCGW	4 cut(s)	164, 332, 356, 1126
PdiI	GCCGGC	2 cut(s)	354, 669
PdmI	GAANNNNTTC	3 cut(s)	200, 1083, 1563
PfeI	GAWTC	7 cut(s)	275, 364, 466, 858, 1090, 1402, 1559
PleI	GAGTC	6 cut(s)	339, 345, 724, 1162, 2188, 2233
PluTI	GGCGCC	2 cut(s)	117, 167
PmaCI	CACGTG	1 cut(s)	1883
PmlI	CACGTG	1 cut(s)	1883
PpsI	GAGTC	6 cut(s)	339, 345, 724, 1162, 2188, 2233
Ppu21I	YACGTR	2 cut(s)	1883, 2288
PpuMI	RGGWCCY	1 cut(s)	1276
PshBI	ATTAAT	1 cut(s)	600
PsiI	TTATAA	1 cut(s)	1214
Psp124BI	GAGCTC	2 cut(s)	347, 1245
Psp5II	RGGWCCY	1 cut(s)	1276
Psp6I	CCWGG	5 cut(s)	453, 609, 973, 1153, 1504
PspCI	CACGTG	1 cut(s)	1883
PspFI	CCCAGC	1 cut(s)	1190
PspGI	CCWGG	5 cut(s)	453, 609, 973, 1153, 1504
PspPI	GGNCC	8 cut(s)	451, 516, 537, 1276, 1290, 2138, 2311, 2428
PspPPI	RGGWCCY	1 cut(s)	1276
PstI	CTGCAG	1 cut(s)	83
PstNI	CAGNNNCTG	2 cut(s)	1952, 2111
RsaI	GTAC	2 cut(s)	1206, 2286
RsaNI	GTAC	2 cut(s)	1205, 2285
RseI	CAYNNNNRTG	2 cut(s)	1418, 2090
SacI	GAGCTC	2 cut(s)	347, 1245
SacII	CCGCGG	1 cut(s)	112
SalI	GTCGAC	1 cut(s)	1500
SapI	GCTCTTC	2 cut(s)	281, 2349
SaqAI	TTAA	7 cut(s)	600, 651, 2124, 2220, 2372, 2412, 2458
Sau3AI	GATC	4 cut(s)	1516, 1660, 1754, 2203
Sau96I	GGNCC	8 cut(s)	451, 516, 537, 1276, 1290, 2138, 2311, 2428
SchI	GAGTC	6 cut(s)	340, 346, 725, 1162, 2189, 2233
ScrFI	CCNGG	9 cut(s)	455, 519, 534, 535, 611, 975, 1155, 1490, 1506
SduI	GDGCHC	5 cut(s)	347, 983, 1120, 1245, 2323
SexAI	ACCWGGT	1 cut(s)	609
SfaNI	GCATC	2 cut(s)	798, 1324
SfcI	CTRYAG	2 cut(s)	79, 2148
SfoI	GGCGCC	2 cut(s)	115, 165
Sfr303I	CCGCGG	1 cut(s)	112
SfuI	TTCGAA	1 cut(s)	413
SgrAI	CRCCGGYG	1 cut(s)	352
SgrBI	CCGCGG	1 cut(s)	112
SinI	GGWCC	2 cut(s)	537, 1276
SmaI	CCCGGG	1 cut(s)	535
SmiMI	CAYNNNNRTG	2 cut(s)	1418, 2090
SmlI	CTYRAG	3 cut(s)	656, 812, 2241
SmoI	CTYRAG	3 cut(s)	656, 812, 2241
SspDI	GGCGCC	2 cut(s)	113, 163
SspI	AATATT	1 cut(s)	1317
SspMI	CTAG	4 cut(s)	123, 1064, 1227, 2009
SstI	GAGCTC	2 cut(s)	347, 1245
StyD4I	CCNGG	9 cut(s)	453, 517, 532, 533, 609, 973, 1153, 1488, 1504
StyI	CCWWGG	3 cut(s)	1618, 1907, 2314
TaaI	ACNGT	2 cut(s)	244, 1308
TaiI	ACGT	6 cut(s)	28, 144, 563, 1885, 1996, 2290
TaqI	TCGA	3 cut(s)	362, 413, 1501
TauI	GCSGC	4 cut(s)	114, 164, 359, 553
TfiI	GAWTC	7 cut(s)	275, 364, 466, 858, 1090, 1402, 1559
Tru1I	TTAA	7 cut(s)	600, 651, 2124, 2220, 2372, 2412, 2458
Tru9I	TTAA	7 cut(s)	600, 651, 2124, 2220, 2372, 2412, 2458
TscAI	CASTG	2 cut(s)	83, 1420
TseFI	GTSAC	3 cut(s)	74, 581, 1622
TseI	GCWGC	6 cut(s)	150, 436, 1685, 2021, 2251, 2402
Tsp45I	GTSAC	3 cut(s)	74, 581, 1622
TspDTI	ATGAA	8 cut(s)	629, 850, 878, 1695, 1726, 1839, 1963, 2398
TspGWI	ACGGA	3 cut(s)	62, 516, 2102
TspMI	CCCGGG	1 cut(s)	533
TspRI	CASTG	2 cut(s)	83, 1420
VpaK11BI	GGWCC	2 cut(s)	537, 1276
VspI	ATTAAT	1 cut(s)	600
XagI	CCTNNNNNAGG	1 cut(s)	1158
XapI	RAATTY	3 cut(s)	522, 1079, 1669
XceI	RCATGY	2 cut(s)	212, 1580
XmaI	CCCGGG	1 cut(s)	533
XmiI	GTMKAC	1 cut(s)	1501
XmnI	GAANNNNTTC	3 cut(s)	200, 1083, 1563
XspI	CTAG	4 cut(s)	123, 1064, 1227, 2009

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.