Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0007746

Physical Location & Seq

Genomic Coordinates Forward (+)

74576258 .. 74582127

Gene Structure 5870 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG467800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2418 bp

ATGTCATCGGCGGTGGAGTATTTACGTCCGACAATCCACACTCGGTTCTGCTTGTACTCCAATTCTAATCTCCGTCACTGCAGTAATGGATTGGGCTTCTTCTTCCTCCGCGGCGCCCAGTCTAGGGTTTTCAGTCCCGACGTGAAACGCTGCGTTTCGGCGGCGCCGTTCCCGAATGTTGCGAGGGTCTCCGAGAAAAGGTTCGGGCATGTGGGAGGTTACAATGGAGGAGGGTTCAGGACGGTTAGGGTTTTTGCGAACGAGCCGGAGAGCGATTCCGGCGAGAAGAGCGAGGCAAGCGAGGGGCAGGGCGTGAATGGCCAGACGCCGAGTCCGAGTCCGAGTCCGAGCTCGTCGCCGGCGGCGTCGAATCCGAGAAGAGGAGAGAGGCAGAAGAAGAAGGAGAGCTGGTGGTTTTCGAAAGGAGGGAAATGGAAGTGGCAGCCGATTGTGCAGGCCCAGGAGATTGGGATTCTGCTGTTGCAGTTGGGGATTGTTATTGTCGTTATGCGGTTGCTCCGGCCCGGAATTCCGTTGCCCGGGTCGGACCCCAGGCCGCCGACGACGTTTATTAGTGTGCCTTATAGTGACTTTTTGAGTAAGATTAATACTAACCAGGTGCAGAAGGTGGAGGTTGATGGGGTTCATGTTATGTTTAAGCTCAAGTCGGAGCAGGGTGGTGAGGTGGAGAGTGAAATGAATGGTGCCAGTAAGTTTCAGGAGTCGGAGGCTTTGCTAAGAAGTGTGGCTCCGACGAGGAGGGTGGTTTATACGACCACTAGGCCGACTGATATCAAGACTCCGTATGAGAAGATGCTTGAGAATGAGGTGGAGTTTGGGTCCCCGGATAAGCGCTCCGGCGGATTCATGAACTCTGCGATGATAGCTTTGTTTTACGTTGCTGTGCTTGCAGGGCTTCTCCACCGGTTCCCTGTTAGCTTTTCTCAGCATACTGCTGGTCAGATTAGGAATAGAAAACCTGGGGGCTCTGGTGGTGCCAAAACATCTGAACCCTCGGAAGCAATAACCTTTGCTGATGTTGCTGGTGTTGACGAGGCTAAGGAGGAGCTAGAGGAAATTGTGGAATTTCTTCGGAATCCAGACAGGTATATACGACTTGGTGCTCGTCCTCCCCGTGGTGTTCTGCTGGTGGGTCTTCCTGGGACAGGTAAGACTCTTCTTGCAAAGGCTGTGGCTGGGGAAGCTGAAGTACCCTTTATAAGTTGCTCTGCTAGTGAGTTCGTAGAGCTCTATGTGGGCATGGGTGCCTCTCGTGTAAGGGACCTATTTGCACGGGCCAAAAAGGAAGCACCGTCAATAATATTTATTGATGAGATAGATGCTGTGGCAAAAAGTCGTGATGGAAAACACCGCATTGTCAGCAATGACGAGAGAGAACAAACATTGAATCAGTTGCTCACTGAGATGGATGGGTTTGACAGCAACTCTGCGGTTATTGTTCTTGGAGCTACTAATCGCGCAGATGTTTTAGACCCAGCACTTCGTCGACCAGGGAGATTTGATCGTGTAGTTATGGTGGAAACGCCTGATAGGATTGGAAGAGAATCAATTCTCAAAGTGCATGTTTCCAAAAAGGAACTTCCTTTAGCTAAAGATGTTTACCTTGGTGACATTGCTTCTATGACCACAGGCTTTACTGGGGCTGATCTTGCAAATTTGGTGAATGAAGCTGCTTTGTTGGCCGGAAGACAAAGCAAGGTGGTTGTGGAAAAGATTGATTTCATTCAGGCTGTGGAGAGATCAATAGCTGGAATTGAAAAGAAGACTGCCAAGTTGCAGGGATGTGAGAAGGGTGTAGTTGCACGACATGAAGCTGGTCATGCAGTTGTAGGGACAGCTATTGCAAGTCTTGTTGCTGGACAGCCACGTGTGGAGAAATTGAGCATATTGCCAAGGACAGGGGGGGCATTGGGTTTTACTTACACTCCTCCAGCGACTGAAGATAGATATTTACTATTCATTGATGAGTTACGTGGACGTTTGGTTACACTTCTTGGAGGACGCGCAGCAGAGGAGTTTGTATATTCAGGTCGTGTATCAACTGGTGCGCTTGATGACATACGGCGAGCCACGGAAATGGCATATAAAGCAGTATCTGAGTATGGTCTTAATGAGAACATTGGCCCTGTGTCTATAGCAACACTTTCTGCTGGTGGAATGGATGAGTCTGGGGGACTTTTTGGAAGGGATCAGGGACACCTTGTTAATCTTGCTCAACGAGAGACTCAAGAATTGCTGCAATCTGCTATGGAGGTAGCCCTTTGTGTTGTACGTGCTAATCCTGTTGTTTTGGAGGGCCTTGGTGCTCATTTGGAAGGTAATATTCTTTTGCTTTGTTTTCCTTTTTTCTTATTTAATTATTTTATCATGGTATTTCATGTGTTCCTAGTTTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004176 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019538 GO:0031967 GO:0031975 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA FtsH_ext Peptidase_M41

Protein Analysis

805

Amino Acids

87.53

Weight (kDa)

8.28

Isoelectric Point (pI)

40.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA	PF00004	381 - 514	1.1e-43	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	539 - 581	3.7e-10	AAA+ lid domain
Peptidase_M41	PF01434	602 - 769	4.4e-30	Peptidase family M41

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007746)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47060 AT5G58870
fragaria_vesca	FvH4_3g38190 FvH4_3g38190 FvH4_3g38190
malus_domestica	MD03G1074100.v1.1 MD11G1080400.v1.1
prunus_persica	Prupe.6G060800_v2.0.a1 Prupe.6G060800_v2.0.a1 Prupe.6G060800_v2.0.a1
pyrus_communis	pycom03g05990 pycom11g06770
rosa_chinensis	RchiOBHm_Chr5g0068621
rosa_laevigata	RLG00000035985
rosa_multiflora	Rmu_co8416215.1_g000001 Rmu_sc0000376.1_g000003 Rmu_sc0004721.1_g000004
rosa_roxburghii	Rroxscaffold_1G00012250
rosa_rugosa	Rorug05G0392000
rosa_samantha	Rh5AG449600 Rh5BG467800 Rh5CG489600 Rh5DG481200
rosa_wichuraiana	Rw5G041980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1220
AccB1I	GGYRCC	5 cut(s)	113, 163, 704, 995, 1265
AccI	GTMKAC	1 cut(s)	1507
AccII	CGCG	3 cut(s)	111, 1479, 2025
AclWI	GGATC	1 cut(s)	2217
AcoI	YGGCCR	2 cut(s)	319, 1701
AcsI	RAATTY	3 cut(s)	528, 1085, 1675
AcuI	CTGAAG	2 cut(s)	1227, 1980
AcvI	CACGTG	1 cut(s)	1889
AcyI	GRCGYC	4 cut(s)	114, 164, 326, 365
AfaI	GTAC	3 cut(s)	56, 1212, 2292
AfeI	AGCGCT	1 cut(s)	854
AfiI	CCNNNNNNNGG	8 cut(s)	123, 124, 198, 380, 539, 1136, 1166, 1919
AflIII	ACRYGT	1 cut(s)	1888
AgeI	ACCGGT	1 cut(s)	924
AgsI	TTSAA	2 cut(s)	1408, 1778
AhdI	GACNNNNNGTC	1 cut(s)	330
AjiI	CACGTC	1 cut(s)	142
AjnI	CCWGG	6 cut(s)	459, 551, 615, 979, 1159, 1510
Alw21I	GWGCWC	4 cut(s)	353, 1126, 1251, 2329
Alw26I	GTCTC	2 cut(s)	193, 2237
AlwI	GGATC	1 cut(s)	2217
AlwNI	CAGNNNCTG	2 cut(s)	1958, 2117
Ama87I	CYCGRG	1 cut(s)	539
Aor51HI	AGCGCT	1 cut(s)	854
AoxI	GGCC	9 cut(s)	319, 456, 521, 554, 782, 1296, 1701, 2143, 2317
ApeKI	GCWGC	5 cut(s)	150, 442, 1691, 2027, 2257
ApoI	RAATTY	3 cut(s)	528, 1085, 1675
AseI	ATTAAT	1 cut(s)	606
AsiGI	ACCGGT	1 cut(s)	924
Asp700I	GAANNNNTTC	3 cut(s)	200, 1089, 1569
AspLEI	GCGC	6 cut(s)	116, 166, 855, 1481, 2027, 2071
AspS9I	GGNCC	8 cut(s)	457, 522, 547, 840, 1282, 1296, 2144, 2317
AsuC2I	CCSGG	4 cut(s)	525, 540, 541, 845
AsuHPI	GGTGA	3 cut(s)	692, 1640, 1693
AsuII	TTCGAA	1 cut(s)	419
AvaI	CYCGRG	1 cut(s)	539
AvaII	GGWCC	3 cut(s)	547, 840, 1282
BalI	TGGCCA	1 cut(s)	321
BanI	GGYRCC	5 cut(s)	113, 163, 704, 995, 1265
BanII	GRGCYC	3 cut(s)	353, 989, 1251
BarI	GAAGNNNNNNTAC	2 cut(s)	1194, 1226
BauI	CACGAG	1 cut(s)	1272
BbrPI	CACGTG	1 cut(s)	1889
BbsI	GAAGAC	3 cut(s)	1148, 1714, 1790
Bbv12I	GWGCWC	4 cut(s)	353, 1126, 1251, 2329
BbvI	GCAGC	5 cut(s)	137, 454, 1678, 2039, 2244
BccI	CCATC	4 cut(s)	632, 1355, 1420, 1424
BceAI	ACGGC	2 cut(s)	151, 2099
BciT130I	CCWGG	6 cut(s)	461, 553, 617, 981, 1161, 1512
BcnI	CCSGG	4 cut(s)	525, 540, 541, 845
BcoDI	GTCTC	2 cut(s)	193, 2237
BfaI	CTAG	5 cut(s)	123, 780, 1070, 1233, 2408
BfmI	CTRYAG	2 cut(s)	79, 2154
BfoI	RGCGCY	3 cut(s)	117, 167, 856
BisI	GCNGC	9 cut(s)	112, 151, 162, 363, 443, 557, 1692, 2028, 2258
BlsI	GCNGC	9 cut(s)	113, 152, 163, 364, 444, 558, 1693, 2029, 2259
Bme18I	GGWCC	3 cut(s)	547, 840, 1282
BmeRI	GACNNNNNGTC	1 cut(s)	330
BmeT110I	CYCGRG	1 cut(s)	539
BmgBI	CACGTC	1 cut(s)	142
BmgT120I	GGNCC	8 cut(s)	457, 522, 547, 840, 1282, 1296, 2144, 2317
BmrI	ACTGGG	2 cut(s)	112, 1668
BmsI	GCATC	2 cut(s)	804, 1330
BmuI	ACTGGG	2 cut(s)	112, 1668
BpiI	GAAGAC	3 cut(s)	1148, 1714, 1790
BpmI	CTGGAG	1 cut(s)	1935
Bpu10I	CCTNAGC	1 cut(s)	1059
Bpu14I	TTCGAA	1 cut(s)	419
BpuEI	CTTGAG	3 cut(s)	647, 839, 2232
BpuMI	CCSGG	4 cut(s)	525, 540, 541, 845
BsaAI	YACGTR	3 cut(s)	1889, 1994, 2294
BsaHI	GRCGYC	4 cut(s)	114, 164, 326, 365
BsaI	GGTCTC	1 cut(s)	193
BsaWI	WCCGGW	1 cut(s)	924
BsaXI	ACNNNNNCTCC	6 cut(s)	395, 425, 824, 854, 1930, 1960
Bsc4I	CCNNNNNNNGG	8 cut(s)	123, 124, 198, 380, 539, 1136, 1166, 1919
Bse118I	RCCGGY	2 cut(s)	358, 924
Bse1I	ACTGG	4 cut(s)	118, 708, 1663, 2068
Bse3DI	GCAATG	2 cut(s)	1390, 1632
BseBI	CCWGG	6 cut(s)	461, 553, 617, 981, 1161, 1512
BseGI	GGATG	3 cut(s)	1435, 1808, 2188
BseLI	CCNNNNNNNGG	8 cut(s)	123, 124, 198, 380, 539, 1136, 1166, 1919
BseMI	GCAATG	2 cut(s)	1390, 1632
BseMII	CTCAG	3 cut(s)	959, 1413, 2109
BseNI	ACTGG	4 cut(s)	118, 708, 1663, 2068
BseRI	GAGGAG	6 cut(s)	243, 396, 772, 1079, 1938, 2048
BseXI	GCAGC	5 cut(s)	137, 454, 1678, 2039, 2244
BseYI	CCCAGC	2 cut(s)	1196, 1495
BsgI	GTGCAG	2 cut(s)	473, 641
Bsh1236I	CGCG	3 cut(s)	111, 1479, 2025
BshFI	GGCC	9 cut(s)	321, 458, 523, 556, 784, 1298, 1703, 2145, 2319
BshNI	GGYRCC	5 cut(s)	113, 163, 704, 995, 1265
BshTI	ACCGGT	1 cut(s)	924
BsiHKAI	GWGCWC	4 cut(s)	353, 1126, 1251, 2329
BsiHKCI	CYCGRG	1 cut(s)	539
BslFI	GGGAC	7 cut(s)	120, 826, 1177, 1295, 1867, 2208, 2229
BslI	CCNNNNNNNGG	8 cut(s)	123, 124, 198, 380, 539, 1136, 1166, 1919
BsmAI	GTCTC	2 cut(s)	193, 2237
BsmFI	GGGAC	7 cut(s)	120, 826, 1177, 1295, 1867, 2208, 2229
BsnI	GGCC	9 cut(s)	321, 458, 523, 556, 784, 1298, 1703, 2145, 2319
Bso31I	GGTCTC	1 cut(s)	193
BsoBI	CYCGRG	1 cut(s)	539
Bsp119I	TTCGAA	1 cut(s)	419
Bsp1286I	GDGCHC	5 cut(s)	353, 989, 1126, 1251, 2329
Bsp143I	GATC	4 cut(s)	1522, 1666, 1760, 2209
BspANI	GGCC	9 cut(s)	321, 458, 523, 556, 784, 1298, 1703, 2145, 2319
BspCNI	CTCAG	3 cut(s)	958, 1414, 2110
BspFNI	CGCG	3 cut(s)	111, 1479, 2025
BspHI	TCATGA	1 cut(s)	867
BspMAI	CTGCAG	1 cut(s)	83
BspPI	GGATC	1 cut(s)	2217
BspQI	GCTCTTC	1 cut(s)	281
BspT104I	TTCGAA	1 cut(s)	419
BspT107I	GGYRCC	5 cut(s)	113, 163, 704, 995, 1265
BspTNI	GGTCTC	1 cut(s)	193
BsrDI	GCAATG	2 cut(s)	1390, 1632
BsrFI	RCCGGY	2 cut(s)	358, 924
BsrI	ACTGG	4 cut(s)	118, 708, 1663, 2068
BssAI	RCCGGY	2 cut(s)	358, 924
BssMI	GATC	4 cut(s)	1522, 1666, 1760, 2209
BssNI	GRCGYC	4 cut(s)	114, 164, 326, 365
BssSI	CACGAG	1 cut(s)	1272
BssT1I	CCWWGG	3 cut(s)	1624, 1913, 2320
Bst2BI	CACGAG	1 cut(s)	1272
Bst2UI	CCWGG	6 cut(s)	461, 553, 617, 981, 1161, 1512
Bst4CI	ACNGT	2 cut(s)	244, 1314
Bst6I	CTCTTC	4 cut(s)	281, 373, 1182, 1555
BstACI	GRCGYC	4 cut(s)	114, 164, 326, 365
BstBAI	YACGTR	3 cut(s)	1889, 1994, 2294
BstBI	TTCGAA	1 cut(s)	419
BstC8I	GCNNGC	5 cut(s)	298, 360, 456, 909, 2088
BstDEI	CTNAG	5 cut(s)	737, 945, 1059, 1422, 2118
BstDSI	CCRYGG	3 cut(s)	109, 1135, 2091
BstENI	CCTNNNNNAGG	1 cut(s)	1164
BstF5I	GGATG	3 cut(s)	1435, 1808, 2188
BstFNI	CGCG	3 cut(s)	111, 1479, 2025
BstH2I	RGCGCY	3 cut(s)	117, 167, 856
BstHHI	GCGC	6 cut(s)	116, 166, 855, 1481, 2027, 2071
BstKTI	GATC	4 cut(s)	1525, 1669, 1763, 2212
BstMAI	GTCTC	2 cut(s)	193, 2237
BstMBI	GATC	4 cut(s)	1522, 1666, 1760, 2209
BstNI	CCWGG	6 cut(s)	461, 553, 617, 981, 1161, 1512
BstNSI	RCATGY	2 cut(s)	212, 1586
BstSFI	CTRYAG	2 cut(s)	79, 2154
BstUI	CGCG	3 cut(s)	111, 1479, 2025
BstV1I	GCAGC	5 cut(s)	137, 454, 1678, 2039, 2244
BstV2I	GAAGAC	3 cut(s)	1148, 1714, 1790
BstXI	CCANNNNNNTGG	2 cut(s)	467, 2098
BsuRI	GGCC	9 cut(s)	321, 458, 523, 556, 784, 1298, 1703, 2145, 2319
BtgI	CCRYGG	3 cut(s)	109, 1135, 2091
BtgZI	GCGATG	1 cut(s)	893
BtrI	CACGTC	1 cut(s)	142
BtsCI	GGATG	3 cut(s)	1435, 1808, 2188
BtsI	GCAGTG	1 cut(s)	76
BtsIMutI	CAGTG	2 cut(s)	76, 1419
Cac8I	GCNNGC	5 cut(s)	298, 360, 456, 909, 2088
CaiI	CAGNNNCTG	2 cut(s)	1958, 2117
CciI	TCATGA	1 cut(s)	867
CfoI	GCGC	6 cut(s)	116, 166, 855, 1481, 2027, 2071
Cfr10I	RCCGGY	2 cut(s)	358, 924
Cfr13I	GGNCC	8 cut(s)	457, 522, 547, 840, 1282, 1296, 2144, 2317
Cfr42I	CCGCGG	1 cut(s)	112
Cfr9I	CCCGGG	1 cut(s)	539
CseI	GACGC	3 cut(s)	334, 354, 2031
CsiI	ACCWGGT	1 cut(s)	615
Csp6I	GTAC	3 cut(s)	55, 1211, 2291
CspAI	ACCGGT	1 cut(s)	924
CspCI	CAANNNNNGTGG	2 cut(s)	1173, 1208
CviAII	CATG	9 cut(s)	209, 647, 868, 1261, 1583, 1829, 1841, 2389, 2399
CviQI	GTAC	3 cut(s)	55, 1211, 2291
DdeI	CTNAG	5 cut(s)	737, 945, 1059, 1422, 2118
DinI	GGCGCC	2 cut(s)	115, 165
DpnI	GATC	4 cut(s)	1524, 1668, 1762, 2211
DpnII	GATC	4 cut(s)	1522, 1666, 1760, 2209
DriI	GACNNNNNGTC	1 cut(s)	330
EaeI	YGGCCR	2 cut(s)	319, 1701
Eam1104I	CTCTTC	4 cut(s)	281, 373, 1182, 1555
Eam1105I	GACNNNNNGTC	1 cut(s)	330
EarI	CTCTTC	4 cut(s)	281, 373, 1182, 1555
EciI	GGCGGA	1 cut(s)	876
Ecl136II	GAGCTC	2 cut(s)	351, 1249
Eco130I	CCWWGG	3 cut(s)	1624, 1913, 2320
Eco24I	GRGCYC	3 cut(s)	353, 989, 1251
Eco31I	GGTCTC	1 cut(s)	193
Eco32I	GATATC	1 cut(s)	793
Eco47I	GGWCC	3 cut(s)	547, 840, 1282
Eco47III	AGCGCT	1 cut(s)	854
Eco53kI	GAGCTC	2 cut(s)	351, 1249
Eco57I	CTGAAG	2 cut(s)	1227, 1980
Eco72I	CACGTG	1 cut(s)	1889
Eco88I	CYCGRG	1 cut(s)	539
EcoICRI	GAGCTC	2 cut(s)	351, 1249
EcoNI	CCTNNNNNAGG	1 cut(s)	1164
EcoO109I	RGGNCCY	3 cut(s)	840, 1282, 2317
EcoRI	GAATTC	1 cut(s)	528
EcoRII	CCWGG	6 cut(s)	459, 551, 615, 979, 1159, 1510
EcoRV	GATATC	1 cut(s)	793
EcoT14I	CCWWGG	3 cut(s)	1624, 1913, 2320
EcoT38I	GRGCYC	3 cut(s)	353, 989, 1251
EgeI	GGCGCC	2 cut(s)	115, 165
EheI	GGCGCC	2 cut(s)	115, 165
ErhI	CCWWGG	3 cut(s)	1624, 1913, 2320
FaeI	CATG	9 cut(s)	212, 650, 871, 1264, 1586, 1832, 1844, 2392, 2402
FaqI	GGGAC	7 cut(s)	120, 826, 1177, 1295, 1867, 2208, 2229
FatI	CATG	9 cut(s)	208, 646, 867, 1260, 1582, 1828, 1840, 2388, 2398
FblI	GTMKAC	1 cut(s)	1507
Fnu4HI	GCNGC	9 cut(s)	112, 151, 162, 363, 443, 557, 1692, 2028, 2258
FokI	GGATG	3 cut(s)	1442, 1815, 2195
FriOI	GRGCYC	3 cut(s)	353, 989, 1251
Fsp4HI	GCNGC	9 cut(s)	112, 151, 162, 363, 443, 557, 1692, 2028, 2258
FspBI	CTAG	5 cut(s)	123, 780, 1070, 1233, 2408
GlaI	GCGC	6 cut(s)	115, 165, 854, 1480, 2026, 2070
GluI	GCNGC	9 cut(s)	112, 151, 162, 363, 443, 557, 1692, 2028, 2258
GsaI	CCCAGC	2 cut(s)	1200, 1499
GsuI	CTGGAG	1 cut(s)	1935
HaeII	RGCGCY	3 cut(s)	117, 167, 856
HaeIII	GGCC	9 cut(s)	321, 458, 523, 556, 784, 1298, 1703, 2145, 2319
HgaI	GACGC	3 cut(s)	334, 354, 2031
HhaI	GCGC	6 cut(s)	116, 166, 855, 1481, 2027, 2071
Hin1I	GRCGYC	4 cut(s)	114, 164, 326, 365
Hin1II	CATG	9 cut(s)	212, 650, 871, 1264, 1586, 1832, 1844, 2392, 2402
Hin6I	GCGC	6 cut(s)	114, 164, 853, 1479, 2025, 2069
HinP1I	GCGC	6 cut(s)	114, 164, 853, 1479, 2025, 2069
HincII	GTYRAC	2 cut(s)	1051, 1508
HindII	GTYRAC	2 cut(s)	1051, 1508
HphI	GGTGA	3 cut(s)	692, 1640, 1693
Hpy166II	GTNNAC	4 cut(s)	1051, 1508, 1621, 1997
Hpy188III	TCNNGA	9 cut(s)	137, 172, 238, 719, 796, 868, 1100, 1358, 2249
Hpy8I	GTNNAC	4 cut(s)	1051, 1508, 1621, 1997
Hpy99I	CGWCG	7 cut(s)	143, 358, 370, 565, 568, 757, 1509
HpyAV	CCTTC	5 cut(s)	394, 619, 1804, 2199, 2330
HpyCH4III	ACNGT	2 cut(s)	244, 1314
HpyCH4IV	ACGT	8 cut(s)	25, 141, 566, 897, 1888, 1993, 1999, 2293
HpyF3I	CTNAG	5 cut(s)	737, 945, 1059, 1422, 2118
HpySE526I	ACGT	8 cut(s)	25, 141, 566, 897, 1888, 1993, 1999, 2293
Hsp92I	GRCGYC	4 cut(s)	114, 164, 326, 365
Hsp92II	CATG	9 cut(s)	212, 650, 871, 1264, 1586, 1832, 1844, 2392, 2402
HspAI	GCGC	6 cut(s)	114, 164, 853, 1479, 2025, 2069
KasI	GGCGCC	2 cut(s)	113, 163
KflI	GGGWCCC	1 cut(s)	840
KroI	GCCGGC	1 cut(s)	358
KroNI	GCCGGC	1 cut(s)	360
KspI	CCGCGG	1 cut(s)	112
Kzo9I	GATC	4 cut(s)	1522, 1666, 1760, 2209
LguI	GCTCTTC	1 cut(s)	281
LmnI	GCTCC	6 cut(s)	522, 670, 754, 860, 1066, 1466
Lsp1109I	GCAGC	5 cut(s)	137, 454, 1678, 2039, 2244
LweI	GCATC	2 cut(s)	804, 1330
MabI	ACCWGGT	1 cut(s)	615
MaeI	CTAG	5 cut(s)	123, 780, 1070, 1233, 2408
MaeII	ACGT	8 cut(s)	25, 141, 566, 897, 1888, 1993, 1999, 2293
MaeIII	GTNAC	6 cut(s)	74, 218, 587, 1628, 1989, 2005
MalI	GATC	4 cut(s)	1524, 1668, 1762, 2211
MboI	GATC	4 cut(s)	1522, 1666, 1760, 2209
MhlI	GDGCHC	5 cut(s)	353, 989, 1126, 1251, 2329
MlsI	TGGCCA	1 cut(s)	321
MluNI	TGGCCA	1 cut(s)	321
Mly113I	GGCGCC	2 cut(s)	114, 164
MlyI	GAGTC	8 cut(s)	340, 346, 352, 731, 793, 1168, 2195, 2239
MmeI	TCCRAC	5 cut(s)	53, 525, 648, 705, 776
Mox20I	TGGCCA	1 cut(s)	321
MreI	CGCCGGCG	1 cut(s)	358
MroNI	GCCGGC	1 cut(s)	358
MroXI	GAANNNNTTC	3 cut(s)	200, 1089, 1569
MscI	TGGCCA	1 cut(s)	321
MseI	TTAA	5 cut(s)	606, 657, 2130, 2226, 2376
MslI	CAYNNNNRTG	2 cut(s)	1424, 2096
Msp20I	TGGCCA	1 cut(s)	321
MspA1I	CMGCKG	1 cut(s)	111
MvaI	CCWGG	6 cut(s)	461, 553, 617, 981, 1161, 1512
MvnI	CGCG	3 cut(s)	111, 1479, 2025
NaeI	GCCGGC	1 cut(s)	360
NarI	GGCGCC	2 cut(s)	114, 164
NciI	CCSGG	4 cut(s)	525, 540, 541, 845
NdeII	GATC	4 cut(s)	1522, 1666, 1760, 2209
NgoMIV	GCCGGC	1 cut(s)	358
NlaIII	CATG	9 cut(s)	212, 650, 871, 1264, 1586, 1832, 1844, 2392, 2402
NmeAIII	GCCGAG	1 cut(s)	354
NmuCI	GTSAC	3 cut(s)	74, 587, 1628
NspI	RCATGY	2 cut(s)	212, 1586
NspV	TTCGAA	1 cut(s)	419
PagI	TCATGA	1 cut(s)	867
PciSI	GCTCTTC	1 cut(s)	281
PcsI	WCGNNNNNNNCGW	4 cut(s)	164, 332, 362, 1132
PdiI	GCCGGC	1 cut(s)	360
PdmI	GAANNNNTTC	3 cut(s)	200, 1089, 1569
PfeI	GAWTC	7 cut(s)	275, 370, 472, 864, 1096, 1408, 1565
PinAI	ACCGGT	1 cut(s)	924
PkrI	GCNGC	9 cut(s)	113, 152, 163, 364, 444, 558, 1693, 2029, 2259
PleI	GAGTC	8 cut(s)	339, 345, 351, 730, 793, 1168, 2194, 2239
PluTI	GGCGCC	2 cut(s)	117, 167
PmaCI	CACGTG	1 cut(s)	1889
PmlI	CACGTG	1 cut(s)	1889
PpsI	GAGTC	8 cut(s)	339, 345, 351, 730, 793, 1168, 2194, 2239
Ppu21I	YACGTR	3 cut(s)	1889, 1994, 2294
PpuMI	RGGWCCY	2 cut(s)	840, 1282
PshBI	ATTAAT	1 cut(s)	606
PsiI	TTATAA	1 cut(s)	1220
Psp124BI	GAGCTC	2 cut(s)	353, 1251
Psp5II	RGGWCCY	2 cut(s)	840, 1282
Psp6I	CCWGG	6 cut(s)	459, 551, 615, 979, 1159, 1510
PspCI	CACGTG	1 cut(s)	1889
PspFI	CCCAGC	2 cut(s)	1196, 1495
PspGI	CCWGG	6 cut(s)	459, 551, 615, 979, 1159, 1510
PspPI	GGNCC	8 cut(s)	457, 522, 547, 840, 1282, 1296, 2144, 2317
PspPPI	RGGWCCY	2 cut(s)	840, 1282
PstI	CTGCAG	1 cut(s)	83
PstNI	CAGNNNCTG	2 cut(s)	1958, 2117
RsaI	GTAC	3 cut(s)	56, 1212, 2292
RsaNI	GTAC	3 cut(s)	55, 1211, 2291
RseI	CAYNNNNRTG	2 cut(s)	1424, 2096
SacI	GAGCTC	2 cut(s)	353, 1251
SacII	CCGCGG	1 cut(s)	112
SalI	GTCGAC	1 cut(s)	1506
SapI	GCTCTTC	1 cut(s)	281
SaqAI	TTAA	5 cut(s)	606, 657, 2130, 2226, 2376
SatI	GCNGC	9 cut(s)	112, 151, 162, 363, 443, 557, 1692, 2028, 2258
Sau3AI	GATC	4 cut(s)	1522, 1666, 1760, 2209
Sau96I	GGNCC	8 cut(s)	457, 522, 547, 840, 1282, 1296, 2144, 2317
SchI	GAGTC	8 cut(s)	340, 346, 352, 731, 793, 1168, 2195, 2239
SduI	GDGCHC	5 cut(s)	353, 989, 1126, 1251, 2329
SexAI	ACCWGGT	1 cut(s)	615
SfaNI	GCATC	2 cut(s)	804, 1330
SfcI	CTRYAG	2 cut(s)	79, 2154
SfoI	GGCGCC	2 cut(s)	115, 165
Sfr303I	CCGCGG	1 cut(s)	112
SfuI	TTCGAA	1 cut(s)	419
SgrAI	CRCCGGYG	1 cut(s)	358
SgrBI	CCGCGG	1 cut(s)	112
SinI	GGWCC	3 cut(s)	547, 840, 1282
SmaI	CCCGGG	1 cut(s)	541
SmiMI	CAYNNNNRTG	2 cut(s)	1424, 2096
SmlI	CTYRAG	3 cut(s)	662, 818, 2247
SmoI	CTYRAG	3 cut(s)	662, 818, 2247
SspDI	GGCGCC	2 cut(s)	113, 163
SspI	AATATT	2 cut(s)	1323, 2344
SspMI	CTAG	5 cut(s)	123, 780, 1070, 1233, 2408
SstI	GAGCTC	2 cut(s)	353, 1251
StyI	CCWWGG	3 cut(s)	1624, 1913, 2320
TaaI	ACNGT	2 cut(s)	244, 1314
TaiI	ACGT	8 cut(s)	28, 144, 569, 900, 1891, 1996, 2002, 2296
TaqI	TCGA	3 cut(s)	368, 419, 1507
TatI	WGTACW	1 cut(s)	54
TauI	GCSGC	4 cut(s)	114, 164, 365, 559
TfiI	GAWTC	7 cut(s)	275, 370, 472, 864, 1096, 1408, 1565
Tru1I	TTAA	5 cut(s)	606, 657, 2130, 2226, 2376
Tru9I	TTAA	5 cut(s)	606, 657, 2130, 2226, 2376
TscAI	CASTG	2 cut(s)	83, 1426
TseFI	GTSAC	3 cut(s)	74, 587, 1628
TseI	GCWGC	5 cut(s)	150, 442, 1691, 2027, 2257
Tsp45I	GTSAC	3 cut(s)	74, 587, 1628
TspDTI	ATGAA	9 cut(s)	635, 713, 856, 884, 1701, 1732, 1845, 1969, 2387
TspGWI	ACGGA	4 cut(s)	62, 522, 792, 2108
TspMI	CCCGGG	1 cut(s)	539
TspRI	CASTG	2 cut(s)	83, 1426
VpaK11BI	GGWCC	3 cut(s)	547, 840, 1282
VspI	ATTAAT	1 cut(s)	606
XagI	CCTNNNNNAGG	1 cut(s)	1164
XapI	RAATTY	3 cut(s)	528, 1085, 1675
XceI	RCATGY	2 cut(s)	212, 1586
XmaI	CCCGGG	1 cut(s)	539
XmiI	GTMKAC	1 cut(s)	1507
XmnI	GAANNNNTTC	3 cut(s)	200, 1089, 1569
XspI	CTAG	5 cut(s)	123, 780, 1070, 1233, 2408

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.