Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0007746

Physical Location & Seq

Genomic Coordinates Reverse (-)

15101024 .. 15106323

Gene Structure 5300 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00012250.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2451 bp

ATGTCATCGGCGGCGGAGTATTTACGTCCGACAATCCACACTCGGTTCTGCTTGTACTCCAATTCTAATCTCCGTCACTGCAGTAATGGATTGGGCTTCTTCTTCCTCCGCGGCGCCCAGTCTAGGGTTTTCAGTCCCGACGTGAAACGCTGCGTTTCGGCGGCGCCGTTCCCGAAGGTTGCGAGGGTCTCCGAGAAAAGGTTCGGGCATGTGGGAGGTTACAATGGAGGAGGGTTCAGGACGGTTAGGGTTTTGGCGAACGAGCCGGAGAGCGATTCCGGGGAGAAGAGCGAGGCCAGCGAGGGGCAGGGTGTGAATGGCCAGACGCCGAGTCCGAGTCCGAGCTCGAGCTCGAGCTCGTCGTCGCCGGCGGCGTCGAATCCGAGAAGAGGAGAGAGGCAGAAGAAGAAGGAGAGCTGGTGGTTTTCAAAAGGAGGGAAATGGAAGTGGCAGCCGATTGTGCAGGCCCAGGAGATTGGGATTCTGCTGTTGCAATTGGGGATTGTGATTTTCGTCATGCGGTTGCTCCGGCCCGGAATTCCGTTGCCCGGGTCCGACCCGAGGCCGCCGACGACGTTTATTAGTGTGCCGTATAGTGACTTTTTGAGTAAGATTAATACTAACCAGGTGCAGAAAGTGGAGGTTGATGGGGTTCATGTTATGTTTAAGCTCAAGTCGGAGCCGGCGGGTGAGGTGGAGAGTGAAATGAATGGTGCCAGTAAGTTTCAGGAGTCGGAGGCTTTGATAAGAAGTGTGGCTCCGACGAGGAGGGTGGTTTATACGACGACCAGGCCAACTGATATCAAGACGCCGTATGAGAAGATGCTTGAGAATGAGGTGGAGTTTGGGTCGCCGGATAAACGCTCCGGCGGATTCATGAACTCTGCGATGATAGCTTTGTTTTATGTTGCTGTGCTTGCAGGGCTTCTCCACAGGTTCCCTGTAAGCTTTTCTCAGCATACGGCTGGTCAGATTAGGAATAGAAAACCTGGGGGCTCTGGTGGTGCCAAAACATCTGAACCCTCAGAAGCAATAACCTTTGCTGATGTTGCTGGTGTTGACGAGGCTAAGGAGGAGCTAGAGGAAATTGTGGAATTTCTTCGGAATCCAGACAGGTATATACGACTTGGTGCTCGTCCTCCCCGTGGTGTTCTGCTGGTGGGTCTTCCTGGGACAGGTAAGACTCTTCTTGCAAAGGCTGTGGCTGGGGAAGCTGAAGTACCCTTTATAAGTTGTTCTGCTAGTGAGTTCGTAGAGCTCTATGTGGGCATGGGTGCCTCTCGTGTAAGGGACCTATTTGCACGGGCAAAAAAGGAAGCACCGTCAATAATTTTTATTGATGAGATAGATGCTGTGGCAAAAAGTCGTGATGGAAAACACCGGATTGTCAGCAATGACGAGAGAGAACAAACATTGAATCAGTTGCTCACTGAGATGGATGGGTTTGACAGTAACTCTGCGGTTATTGTTCTTGGAGCTACTAATCGCGCAGATGTTTTAGACCCAGCACTTCGTCGACCAGGGAGATTTGATCGTGTAGTTATGGTGGAAACGCCTGATAGGATTGGAAGAGAATCAATTCTCAAAGTGCATGTTTCCAAAAAGGAACTTCCTTTAGCTAAAGATGTTTACCTTGGTGACATTGCTTCTATGACCACAGGCTTTACTGGGGCTGATCTTGCAAATTTGGTGAATGAAGCTGCTTTGTTGGCCGGAAGACAAAGCAAGGGAATTGAAAAGAAGACTGCCAAGTTGCAGGGGTGTGAAAAGGGTGTAGTTGCACGACATGAAGCTGGTCATGCAGTTGTAGGGACAGCTATTGCAAGTCTTGTTGCTGGACAGCCACGTGTGGAGATATATAACAATAACTATATGTTGACAGAAATTGAGCATATTGCCAAGGACAGGGGGGCATTGGGCTTTACTTACACTCCTCCAGCGACTGAAGATAGATATTTACTATTCATTGATGAGTTACGTGGACGTTTGGTTACACTTCTTGGAGGACGCGCAGCAGAGGAGTTTGTATATTCAGGTCGTGTATCAACTGGTGCGCTTGATGACATACGGCGAGCCACGGAAATGGCATATAAAGCTGTATCTGAGTATGGTCTTAATGAGAACATTGGCCCTGTGTCTATAGCAACACTTTCTGCTGGTGGAATGGATGAGTCTGGGGGACTTTTTGGAAGGGATCAGGGACACCTTGTTAATCTTGCTCAACGAGAGACTCAAGAATTGCTGCAATCTGCTATGGAGGTAGCCCTTTGTGTTGTACGTGCTAATCCTGTTGTTTTGGAGGGCCTTGGTGCTCATTTGGAAGAAAAAGAGAAAGTAGAAGGTGAAGAGCTACACAAGTGGTTAAAATTGGTGGTTGCACCAGCAGAACTTGTTGCCTTCATTAAAGGCAAGCAACGGGCCCTTCTTCCATTGCAGACCACCTCTGGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004176 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019538 GO:0031967 GO:0031975 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA FtsH_ext Peptidase_M41

Protein Analysis

816

Amino Acids

88.63

Weight (kDa)

8.28

Isoelectric Point (pI)

42.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA	PF00004	384 - 517	1.1e-43	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	542 - 574	8.7e-10	AAA+ lid domain
Peptidase_M41	PF01434	588 - 785	5.2e-25	Peptidase family M41

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007746)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47060 AT5G58870
fragaria_vesca	FvH4_3g38190 FvH4_3g38190 FvH4_3g38190
malus_domestica	MD03G1074100.v1.1 MD11G1080400.v1.1
prunus_persica	Prupe.6G060800_v2.0.a1 Prupe.6G060800_v2.0.a1 Prupe.6G060800_v2.0.a1
pyrus_communis	pycom03g05990 pycom11g06770
rosa_chinensis	RchiOBHm_Chr5g0068621
rosa_laevigata	RLG00000035985
rosa_multiflora	Rmu_co8416215.1_g000001 Rmu_sc0000376.1_g000003 Rmu_sc0004721.1_g000004
rosa_roxburghii	Rroxscaffold_1G00012250
rosa_rugosa	Rorug05G0392000
rosa_samantha	Rh5AG449600 Rh5BG467800 Rh5CG489600 Rh5DG481200
rosa_wichuraiana	Rw5G041980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1229
AccB1I	GGYRCC	5 cut(s)	113, 163, 713, 1004, 1274
AccI	GTMKAC	1 cut(s)	1516
AccII	CGCG	3 cut(s)	111, 1488, 2010
AclWI	GGATC	1 cut(s)	2202
AcoI	YGGCCR	2 cut(s)	319, 1710
AcsI	RAATTY	3 cut(s)	537, 1094, 1684
AcuI	CTGAAG	2 cut(s)	1236, 1965
AcvI	CACGTG	1 cut(s)	1847
AcyI	GRCGYC	5 cut(s)	114, 164, 326, 374, 809
AfaI	GTAC	3 cut(s)	56, 1221, 2277
AflIII	ACRYGT	1 cut(s)	1846
AgsI	TTSAA	3 cut(s)	429, 1417, 1736
AhdI	GACNNNNNGTC	1 cut(s)	330
AjiI	CACGTC	1 cut(s)	142
AjnI	CCWGG	6 cut(s)	468, 624, 788, 988, 1168, 1519
Alw21I	GWGCWC	6 cut(s)	347, 353, 359, 1135, 1260, 2314
Alw26I	GTCTC	2 cut(s)	193, 2222
AlwI	GGATC	1 cut(s)	2202
AlwNI	CAGNNNCTG	1 cut(s)	1943
Ama87I	CYCGRG	4 cut(s)	346, 352, 548, 559
ApaI	GGGCCC	1 cut(s)	2422
ApeKI	GCWGC	5 cut(s)	150, 451, 1700, 2012, 2242
ApoI	RAATTY	3 cut(s)	537, 1094, 1684
AseI	ATTAAT	1 cut(s)	615
Asp700I	GAANNNNTTC	3 cut(s)	200, 1098, 1578
AspLEI	GCGC	5 cut(s)	116, 166, 1490, 2012, 2056
AspS9I	GGNCC	8 cut(s)	466, 531, 552, 1291, 2129, 2302, 2418, 2419
AsuC2I	CCSGG	4 cut(s)	280, 534, 549, 550
AsuHPI	GGTGA	4 cut(s)	701, 1649, 1702, 2354
AvaI	CYCGRG	4 cut(s)	346, 352, 548, 559
AvaII	GGWCC	2 cut(s)	552, 1291
BaeGI	GKGCMC	1 cut(s)	2422
BalI	TGGCCA	1 cut(s)	321
BanI	GGYRCC	5 cut(s)	113, 163, 713, 1004, 1274
BanII	GRGCYC	6 cut(s)	347, 353, 359, 998, 1260, 2422
BarI	GAAGNNNNNNTAC	2 cut(s)	1203, 1235
BauI	CACGAG	1 cut(s)	1281
BbrPI	CACGTG	1 cut(s)	1847
BbsI	GAAGAC	3 cut(s)	1157, 1723, 1748
Bbv12I	GWGCWC	6 cut(s)	347, 353, 359, 1135, 1260, 2314
BbvI	GCAGC	5 cut(s)	137, 463, 1687, 2024, 2229
BccI	CCATC	4 cut(s)	641, 1364, 1429, 1433
BceAI	ACGGC	5 cut(s)	151, 574, 796, 978, 2084
BciT130I	CCWGG	6 cut(s)	470, 626, 790, 990, 1170, 1521
BcnI	CCSGG	4 cut(s)	280, 534, 549, 550
BcoDI	GTCTC	2 cut(s)	193, 2222
BfaI	CTAG	3 cut(s)	123, 1079, 1242
BfmI	CTRYAG	2 cut(s)	79, 2139
BfoI	RGCGCY	2 cut(s)	117, 167
Bme18I	GGWCC	2 cut(s)	552, 1291
BmeRI	GACNNNNNGTC	1 cut(s)	330
BmeT110I	CYCGRG	4 cut(s)	346, 352, 548, 559
BmgBI	CACGTC	1 cut(s)	142
BmgT120I	GGNCC	8 cut(s)	466, 531, 552, 1291, 2129, 2302, 2418, 2419
BmrI	ACTGGG	2 cut(s)	112, 1677
BmsI	GCATC	2 cut(s)	813, 1339
BmuI	ACTGGG	2 cut(s)	112, 1677
BpiI	GAAGAC	3 cut(s)	1157, 1723, 1748
BpmI	CTGGAG	1 cut(s)	1920
Bpu10I	CCTNAGC	1 cut(s)	1068
BpuEI	CTTGAG	3 cut(s)	656, 848, 2217
BpuMI	CCSGG	4 cut(s)	280, 534, 549, 550
BsaAI	YACGTR	3 cut(s)	1847, 1979, 2279
BsaHI	GRCGYC	5 cut(s)	114, 164, 326, 374, 809
BsaI	GGTCTC	1 cut(s)	193
BsaWI	WCCGGW	1 cut(s)	1380
BsaXI	ACNNNNNCTCC	6 cut(s)	404, 434, 833, 863, 1915, 1945
Bse118I	RCCGGY	2 cut(s)	367, 682
Bse1I	ACTGG	4 cut(s)	118, 717, 1672, 2053
Bse3DI	GCAATG	3 cut(s)	1399, 1641, 2429
BseBI	CCWGG	6 cut(s)	470, 626, 790, 990, 1170, 1521
BseGI	GGATG	2 cut(s)	1444, 2173
BseMI	GCAATG	3 cut(s)	1399, 1641, 2429
BseMII	CTCAG	4 cut(s)	968, 1038, 1422, 2094
BseNI	ACTGG	4 cut(s)	118, 717, 1672, 2053
BseRI	GAGGAG	6 cut(s)	243, 405, 781, 1088, 1923, 2033
BseSI	GKGCMC	1 cut(s)	2422
BseXI	GCAGC	5 cut(s)	137, 463, 1687, 2024, 2229
BseYI	CCCAGC	2 cut(s)	1205, 1504
BsgI	GTGCAG	2 cut(s)	482, 650
Bsh1236I	CGCG	3 cut(s)	111, 1488, 2010
BshNI	GGYRCC	5 cut(s)	113, 163, 713, 1004, 1274
BsiHKAI	GWGCWC	6 cut(s)	347, 353, 359, 1135, 1260, 2314
BsiHKCI	CYCGRG	4 cut(s)	346, 352, 548, 559
BslFI	GGGAC	6 cut(s)	120, 1186, 1304, 1825, 2193, 2214
BsmAI	GTCTC	2 cut(s)	193, 2222
BsmFI	GGGAC	6 cut(s)	120, 1186, 1304, 1825, 2193, 2214
Bso31I	GGTCTC	1 cut(s)	193
BsoBI	CYCGRG	4 cut(s)	346, 352, 548, 559
Bsp120I	GGGCCC	1 cut(s)	2418
Bsp1286I	GDGCHC	8 cut(s)	347, 353, 359, 998, 1135, 1260, 2314, 2422
Bsp143I	GATC	3 cut(s)	1531, 1675, 2194
BspCNI	CTCAG	4 cut(s)	967, 1037, 1423, 2095
BspFNI	CGCG	3 cut(s)	111, 1488, 2010
BspHI	TCATGA	1 cut(s)	876
BspMAI	CTGCAG	1 cut(s)	83
BspPI	GGATC	1 cut(s)	2202
BspQI	GCTCTTC	2 cut(s)	281, 2340
BspT107I	GGYRCC	5 cut(s)	113, 163, 713, 1004, 1274
BspTNI	GGTCTC	1 cut(s)	193
BsrDI	GCAATG	3 cut(s)	1399, 1641, 2429
BsrFI	RCCGGY	2 cut(s)	367, 682
BsrI	ACTGG	4 cut(s)	118, 717, 1672, 2053
BssAI	RCCGGY	2 cut(s)	367, 682
BssMI	GATC	3 cut(s)	1531, 1675, 2194
BssNI	GRCGYC	5 cut(s)	114, 164, 326, 374, 809
BssSI	CACGAG	1 cut(s)	1281
BssT1I	CCWWGG	3 cut(s)	1633, 1899, 2305
Bst2BI	CACGAG	1 cut(s)	1281
Bst2UI	CCWGG	6 cut(s)	470, 626, 790, 990, 1170, 1521
Bst4CI	ACNGT	3 cut(s)	244, 1323, 1451
Bst6I	CTCTTC	5 cut(s)	281, 382, 1191, 1564, 2340
BstACI	GRCGYC	5 cut(s)	114, 164, 326, 374, 809
BstBAI	YACGTR	3 cut(s)	1847, 1979, 2279
BstC8I	GCNNGC	7 cut(s)	298, 369, 465, 684, 918, 2073, 2411
BstDEI	CTNAG	5 cut(s)	954, 1024, 1068, 1431, 2103
BstDSI	CCRYGG	3 cut(s)	109, 1144, 2076
BstENI	CCTNNNNNAGG	1 cut(s)	1173
BstF5I	GGATG	2 cut(s)	1444, 2173
BstFNI	CGCG	3 cut(s)	111, 1488, 2010
BstH2I	RGCGCY	2 cut(s)	117, 167
BstHHI	GCGC	5 cut(s)	116, 166, 1490, 2012, 2056
BstKTI	GATC	3 cut(s)	1534, 1678, 2197
BstMAI	GTCTC	2 cut(s)	193, 2222
BstMBI	GATC	3 cut(s)	1531, 1675, 2194
BstNI	CCWGG	6 cut(s)	470, 626, 790, 990, 1170, 1521
BstNSI	RCATGY	2 cut(s)	212, 1595
BstSFI	CTRYAG	2 cut(s)	79, 2139
BstSLI	GKGCMC	1 cut(s)	2422
BstUI	CGCG	3 cut(s)	111, 1488, 2010
BstV1I	GCAGC	5 cut(s)	137, 463, 1687, 2024, 2229
BstV2I	GAAGAC	3 cut(s)	1157, 1723, 1748
BstXI	CCANNNNNNTGG	2 cut(s)	476, 2083
BtgI	CCRYGG	3 cut(s)	109, 1144, 2076
BtgZI	GCGATG	1 cut(s)	902
BtrI	CACGTC	1 cut(s)	142
BtsCI	GGATG	2 cut(s)	1444, 2173
BtsI	GCAGTG	1 cut(s)	76
BtsIMutI	CAGTG	2 cut(s)	76, 1428
Cac8I	GCNNGC	7 cut(s)	298, 369, 465, 684, 918, 2073, 2411
CaiI	CAGNNNCTG	1 cut(s)	1943
CciI	TCATGA	1 cut(s)	876
CfoI	GCGC	5 cut(s)	116, 166, 1490, 2012, 2056
Cfr10I	RCCGGY	2 cut(s)	367, 682
Cfr13I	GGNCC	8 cut(s)	466, 531, 552, 1291, 2129, 2302, 2418, 2419
Cfr42I	CCGCGG	1 cut(s)	112
Cfr9I	CCCGGG	1 cut(s)	548
CseI	GACGC	4 cut(s)	334, 363, 817, 2016
CsiI	ACCWGGT	1 cut(s)	624
Csp6I	GTAC	3 cut(s)	55, 1220, 2276
CspCI	CAANNNNNGTGG	2 cut(s)	1182, 1217
CviAII	CATG	8 cut(s)	209, 517, 656, 877, 1270, 1592, 1787, 1799
CviQI	GTAC	3 cut(s)	55, 1220, 2276
DdeI	CTNAG	5 cut(s)	954, 1024, 1068, 1431, 2103
DinI	GGCGCC	2 cut(s)	115, 165
DpnI	GATC	3 cut(s)	1533, 1677, 2196
DpnII	GATC	3 cut(s)	1531, 1675, 2194
DriI	GACNNNNNGTC	1 cut(s)	330
EaeI	YGGCCR	2 cut(s)	319, 1710
Eam1104I	CTCTTC	5 cut(s)	281, 382, 1191, 1564, 2340
Eam1105I	GACNNNNNGTC	1 cut(s)	330
EarI	CTCTTC	5 cut(s)	281, 382, 1191, 1564, 2340
EciI	GGCGGA	2 cut(s)	29, 885
Ecl136II	GAGCTC	4 cut(s)	345, 351, 357, 1258
Eco130I	CCWWGG	3 cut(s)	1633, 1899, 2305
Eco24I	GRGCYC	6 cut(s)	347, 353, 359, 998, 1260, 2422
Eco31I	GGTCTC	1 cut(s)	193
Eco32I	GATATC	1 cut(s)	802
Eco47I	GGWCC	2 cut(s)	552, 1291
Eco53kI	GAGCTC	4 cut(s)	345, 351, 357, 1258
Eco57I	CTGAAG	2 cut(s)	1236, 1965
Eco72I	CACGTG	1 cut(s)	1847
Eco88I	CYCGRG	4 cut(s)	346, 352, 548, 559
EcoICRI	GAGCTC	4 cut(s)	345, 351, 357, 1258
EcoNI	CCTNNNNNAGG	1 cut(s)	1173
EcoO109I	RGGNCCY	3 cut(s)	1291, 2302, 2419
EcoRI	GAATTC	1 cut(s)	537
EcoRII	CCWGG	6 cut(s)	468, 624, 788, 988, 1168, 1519
EcoRV	GATATC	1 cut(s)	802
EcoT14I	CCWWGG	3 cut(s)	1633, 1899, 2305
EcoT38I	GRGCYC	6 cut(s)	347, 353, 359, 998, 1260, 2422
EgeI	GGCGCC	2 cut(s)	115, 165
EheI	GGCGCC	2 cut(s)	115, 165
ErhI	CCWWGG	3 cut(s)	1633, 1899, 2305
FaeI	CATG	8 cut(s)	212, 520, 659, 880, 1273, 1595, 1790, 1802
FaqI	GGGAC	6 cut(s)	120, 1186, 1304, 1825, 2193, 2214
FatI	CATG	8 cut(s)	208, 516, 655, 876, 1269, 1591, 1786, 1798
FauI	CCCGC	1 cut(s)	679
FblI	GTMKAC	1 cut(s)	1516
FokI	GGATG	2 cut(s)	1451, 2180
FriOI	GRGCYC	6 cut(s)	347, 353, 359, 998, 1260, 2422
FspBI	CTAG	3 cut(s)	123, 1079, 1242
GlaI	GCGC	5 cut(s)	115, 165, 1489, 2011, 2055
GsaI	CCCAGC	2 cut(s)	1209, 1508
GsuI	CTGGAG	1 cut(s)	1920
HaeII	RGCGCY	2 cut(s)	117, 167
HgaI	GACGC	4 cut(s)	334, 363, 817, 2016
HhaI	GCGC	5 cut(s)	116, 166, 1490, 2012, 2056
Hin1I	GRCGYC	5 cut(s)	114, 164, 326, 374, 809
Hin1II	CATG	8 cut(s)	212, 520, 659, 880, 1273, 1595, 1790, 1802
Hin6I	GCGC	5 cut(s)	114, 164, 1488, 2010, 2054
HinP1I	GCGC	5 cut(s)	114, 164, 1488, 2010, 2054
HincII	GTYRAC	3 cut(s)	1060, 1517, 1878
HindII	GTYRAC	3 cut(s)	1060, 1517, 1878
HindIII	AAGCTT	1 cut(s)	946
HphI	GGTGA	4 cut(s)	701, 1649, 1702, 2354
Hpy166II	GTNNAC	5 cut(s)	1060, 1517, 1630, 1878, 1982
Hpy188III	TCNNGA	9 cut(s)	137, 172, 238, 728, 805, 877, 1109, 1367, 2234
Hpy8I	GTNNAC	5 cut(s)	1060, 1517, 1630, 1878, 1982
Hpy99I	CGWCG	9 cut(s)	143, 364, 367, 379, 574, 577, 766, 787, 1518
HpyAV	CCTTC	6 cut(s)	169, 403, 2184, 2333, 2407, 2432
HpyCH4III	ACNGT	3 cut(s)	244, 1323, 1451
HpyCH4IV	ACGT	7 cut(s)	25, 141, 575, 1846, 1978, 1984, 2278
HpyF3I	CTNAG	5 cut(s)	954, 1024, 1068, 1431, 2103
HpySE526I	ACGT	7 cut(s)	25, 141, 575, 1846, 1978, 1984, 2278
Hsp92I	GRCGYC	5 cut(s)	114, 164, 326, 374, 809
Hsp92II	CATG	8 cut(s)	212, 520, 659, 880, 1273, 1595, 1790, 1802
HspAI	GCGC	5 cut(s)	114, 164, 1488, 2010, 2054
KasI	GGCGCC	2 cut(s)	113, 163
KroI	GCCGGC	2 cut(s)	367, 682
KroNI	GCCGGC	2 cut(s)	369, 684
KspI	CCGCGG	1 cut(s)	112
Kzo9I	GATC	3 cut(s)	1531, 1675, 2194
LguI	GCTCTTC	2 cut(s)	281, 2340
LmnI	GCTCC	6 cut(s)	531, 679, 763, 869, 1075, 1475
Lsp1109I	GCAGC	5 cut(s)	137, 463, 1687, 2024, 2229
LweI	GCATC	2 cut(s)	813, 1339
MabI	ACCWGGT	1 cut(s)	624
MaeI	CTAG	3 cut(s)	123, 1079, 1242
MaeII	ACGT	7 cut(s)	25, 141, 575, 1846, 1978, 1984, 2278
MaeIII	GTNAC	7 cut(s)	74, 218, 596, 1451, 1637, 1974, 1990
MalI	GATC	3 cut(s)	1533, 1677, 2196
MboI	GATC	3 cut(s)	1531, 1675, 2194
MfeI	CAATTG	1 cut(s)	494
MhlI	GDGCHC	8 cut(s)	347, 353, 359, 998, 1135, 1260, 2314, 2422
MlsI	TGGCCA	1 cut(s)	321
MluNI	TGGCCA	1 cut(s)	321
Mly113I	GGCGCC	2 cut(s)	114, 164
MlyI	GAGTC	6 cut(s)	340, 346, 740, 1177, 2180, 2224
MmeI	TCCRAC	5 cut(s)	53, 579, 657, 714, 785
Mox20I	TGGCCA	1 cut(s)	321
MreI	CGCCGGCG	1 cut(s)	367
MroNI	GCCGGC	2 cut(s)	367, 682
MroXI	GAANNNNTTC	3 cut(s)	200, 1098, 1578
MscI	TGGCCA	1 cut(s)	321
MseI	TTAA	7 cut(s)	615, 666, 2115, 2211, 2363, 2403, 2449
MslI	CAYNNNNRTG	2 cut(s)	1433, 2081
Msp20I	TGGCCA	1 cut(s)	321
MspA1I	CMGCKG	1 cut(s)	111
MunI	CAATTG	1 cut(s)	494
MvaI	CCWGG	6 cut(s)	470, 626, 790, 990, 1170, 1521
MvnI	CGCG	3 cut(s)	111, 1488, 2010
NaeI	GCCGGC	2 cut(s)	369, 684
NarI	GGCGCC	2 cut(s)	114, 164
NciI	CCSGG	4 cut(s)	280, 534, 549, 550
NdeII	GATC	3 cut(s)	1531, 1675, 2194
NgoMIV	GCCGGC	2 cut(s)	367, 682
NlaIII	CATG	8 cut(s)	212, 520, 659, 880, 1273, 1595, 1790, 1802
NmeAIII	GCCGAG	1 cut(s)	354
NmuCI	GTSAC	3 cut(s)	74, 596, 1637
NspI	RCATGY	2 cut(s)	212, 1595
PaeR7I	CTCGAG	2 cut(s)	346, 352
PagI	TCATGA	1 cut(s)	876
PciSI	GCTCTTC	2 cut(s)	281, 2340
PcsI	WCGNNNNNNNCGW	5 cut(s)	164, 332, 359, 371, 1141
PdiI	GCCGGC	2 cut(s)	369, 684
PdmI	GAANNNNTTC	3 cut(s)	200, 1098, 1578
PfeI	GAWTC	7 cut(s)	275, 379, 481, 873, 1105, 1417, 1574
PleI	GAGTC	6 cut(s)	339, 345, 739, 1177, 2179, 2224
PluTI	GGCGCC	2 cut(s)	117, 167
PmaCI	CACGTG	1 cut(s)	1847
PmlI	CACGTG	1 cut(s)	1847
PpsI	GAGTC	6 cut(s)	339, 345, 739, 1177, 2179, 2224
Ppu21I	YACGTR	3 cut(s)	1847, 1979, 2279
PpuMI	RGGWCCY	1 cut(s)	1291
PshBI	ATTAAT	1 cut(s)	615
PsiI	TTATAA	1 cut(s)	1229
Psp124BI	GAGCTC	4 cut(s)	347, 353, 359, 1260
Psp5II	RGGWCCY	1 cut(s)	1291
Psp6I	CCWGG	6 cut(s)	468, 624, 788, 988, 1168, 1519
PspCI	CACGTG	1 cut(s)	1847
PspFI	CCCAGC	2 cut(s)	1205, 1504
PspGI	CCWGG	6 cut(s)	468, 624, 788, 988, 1168, 1519
PspOMI	GGGCCC	1 cut(s)	2418
PspPI	GGNCC	8 cut(s)	466, 531, 552, 1291, 2129, 2302, 2418, 2419
PspPPI	RGGWCCY	1 cut(s)	1291
PspXI	VCTCGAGB	2 cut(s)	346, 352
PstI	CTGCAG	1 cut(s)	83
PstNI	CAGNNNCTG	1 cut(s)	1943
RsaI	GTAC	3 cut(s)	56, 1221, 2277
RsaNI	GTAC	3 cut(s)	55, 1220, 2276
RseI	CAYNNNNRTG	2 cut(s)	1433, 2081
SacI	GAGCTC	4 cut(s)	347, 353, 359, 1260
SacII	CCGCGG	1 cut(s)	112
SalI	GTCGAC	1 cut(s)	1515
SapI	GCTCTTC	2 cut(s)	281, 2340
SaqAI	TTAA	7 cut(s)	615, 666, 2115, 2211, 2363, 2403, 2449
Sau3AI	GATC	3 cut(s)	1531, 1675, 2194
Sau96I	GGNCC	8 cut(s)	466, 531, 552, 1291, 2129, 2302, 2418, 2419
SchI	GAGTC	6 cut(s)	340, 346, 740, 1177, 2180, 2224
SduI	GDGCHC	8 cut(s)	347, 353, 359, 998, 1135, 1260, 2314, 2422
SexAI	ACCWGGT	1 cut(s)	624
SfaNI	GCATC	2 cut(s)	813, 1339
SfcI	CTRYAG	2 cut(s)	79, 2139
SfoI	GGCGCC	2 cut(s)	115, 165
Sfr274I	CTCGAG	2 cut(s)	346, 352
Sfr303I	CCGCGG	1 cut(s)	112
SgrAI	CRCCGGYG	1 cut(s)	367
SgrBI	CCGCGG	1 cut(s)	112
SinI	GGWCC	2 cut(s)	552, 1291
SlaI	CTCGAG	2 cut(s)	346, 352
SmaI	CCCGGG	1 cut(s)	550
SmiMI	CAYNNNNRTG	2 cut(s)	1433, 2081
SmlI	CTYRAG	5 cut(s)	346, 352, 671, 827, 2232
SmoI	CTYRAG	5 cut(s)	346, 352, 671, 827, 2232
SspDI	GGCGCC	2 cut(s)	113, 163
SspMI	CTAG	3 cut(s)	123, 1079, 1242
SstI	GAGCTC	4 cut(s)	347, 353, 359, 1260
StyI	CCWWGG	3 cut(s)	1633, 1899, 2305
TaaI	ACNGT	3 cut(s)	244, 1323, 1451
TaiI	ACGT	7 cut(s)	28, 144, 578, 1849, 1981, 1987, 2281
TaqI	TCGA	4 cut(s)	347, 353, 377, 1516
TatI	WGTACW	1 cut(s)	54
TauI	GCSGC	5 cut(s)	14, 114, 164, 374, 568
TfiI	GAWTC	7 cut(s)	275, 379, 481, 873, 1105, 1417, 1574
Tru1I	TTAA	7 cut(s)	615, 666, 2115, 2211, 2363, 2403, 2449
Tru9I	TTAA	7 cut(s)	615, 666, 2115, 2211, 2363, 2403, 2449
TscAI	CASTG	2 cut(s)	83, 1435
TseFI	GTSAC	3 cut(s)	74, 596, 1637
TseI	GCWGC	5 cut(s)	150, 451, 1700, 2012, 2242
Tsp45I	GTSAC	3 cut(s)	74, 596, 1637
TspDTI	ATGAA	8 cut(s)	644, 722, 865, 893, 1710, 1803, 1954, 2389
TspGWI	ACGGA	3 cut(s)	62, 531, 2093
TspMI	CCCGGG	1 cut(s)	548
TspRI	CASTG	2 cut(s)	83, 1435
VpaK11BI	GGWCC	2 cut(s)	552, 1291
VspI	ATTAAT	1 cut(s)	615
XagI	CCTNNNNNAGG	1 cut(s)	1173
XapI	RAATTY	3 cut(s)	537, 1094, 1684
XceI	RCATGY	2 cut(s)	212, 1595
XhoI	CTCGAG	2 cut(s)	346, 352
XmaI	CCCGGG	1 cut(s)	548
XmiI	GTMKAC	1 cut(s)	1516
XmnI	GAANNNNTTC	3 cut(s)	200, 1098, 1578
XspI	CTAG	3 cut(s)	123, 1079, 1242

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.