Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0007746

Physical Location & Seq

Genomic Coordinates Forward (+)

32598852 .. 32604536

Gene Structure 5685 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g38190.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2376 bp

ATGACGTCATCGACGGTGGAGTATTTACGTCCGGCAATCCATACTAGGTTCAGCTTAAATTCGAATCCGAATAACGGATTGGGCTTCTTCTTCCTCCGCGGGTTTCAATCTCAGTCTAGGGTTTTCAACCCGGACGCGAAACGCTGCGTTTCGGCGGCGCCATTCCCGAAGGTTCTGACGGTATCGGAGAAAAGGTTCGCGCTTTTCGGCGGTTACGGGAGGAGGAACGGAGGGTTGAGGACGGTTAGGGTTTTGGCGAGCGGGCCGGAGAGCGATTCCGGCGAGAAGAGCGAGGCGGGGGAAGGGCAGGGAGGTGTGAACGGCAAGACGCCGGCGGCGAAACCGAGCTCGCCGCCGGCGTCGAATCAGAGGAGAGGAGAGAAGCAGAAGAAGGAGAGCTGGTGGTTTTCGAAAGGAGGGAAATGGAAGTGGCAGCCGATTGTGCAGGCTCAGGAGATTGGGATTCTGTTGTTGCAGTTAGGGATTGTGATTTTCGTTATGCGGTTGCTCCGGCCCGGAATCCCGTTGCCCGGGTCCGACCCGAGGCCGCCGACGACGTTTATTAGTGTGCCGTATAGTGACTTTTTGAGTAAGATAAATACTAACCAGGTGCAGAAGGTGGAGGTTGATGGGGTTCATGTGATGTTTAAGCTGAAATCGGAGCCCGCTGGTGAGGTGGAGAGTGAGGTGAATAGTGGTGGTGTTAGTAAGTTTCAGGAGTCAGAGGCTTTGTTAAGAAGTGTGGCTCCGACGAGGAGGGTGGTTTATACTACCACCAGGCCAACTGATATCAAGACGCCGTATGAGAAGATGCTTGAGAATGAGGTGGAGTTTGGGTCCCCGGATAAGCGCTCTGGTGGATTCATGAACTCTGCAATGATAGCTTTGTTTTATGTTGCTGTGCTTGCAGGACTTCTCCACCGGTTCCCTGTAAGCTTTTCTCAGCATACAGCTGGTCAGATTAGGAATAGAAAAACTGGGGGCTCCGGTGGTGCGAAAACATCTGAACCCTCGGAAGCAATAACCTTTGCTGATGTTGCTGGTGTTGACGAGGCTAAAGAGGAGCTAGAGGAAATTGTGGAATTTCTTCGGAATCCAGACAGGTATATACGACTTGGTGCTCGTCCTCCCCGTGGTGTTCTGCTGGTGGGTCTTCCTGGGACAGGTAAGACTCTTCTTGCAAAGGCTGTGGCTGGGGAAGCTGAAGTACCCTTTATAAGTTGCTCTGCTAGTGAGTTTGTGGAGCTGTATGTTGGCATGGGTGCCTCTCGTGTTAGGGATCTATTTGCACGGGCAAAAAAGGAAGCACCGTCAATAATATTTATTGATGAGATAGATGCTGTGGCAAAAAGTCGTGATGGAAAACACCGCATTGTCAGCAATGACGAGAGAGAACAAACATTGAATCAGTTGCTCACTGAGATGGATGGGTTTGACAGCAACTCAGCAGTTATTGTTCTTGGAGCTACTAATCGCGCAGATGTATTAGACCCCGCGCTTCGTCGACCAGGGAGATTTGATCGTGTGGTTATGGTTGAAACGCCTGATAGGATTGGAAGAGAATCAATTCTCAAAGTGCATGTTACTAAAAAGGAACTTCCTTTAGCTAAAGACGTTTACCTTGGTGACATTGCTTCTATGACAACAGGCTTTACTGGGGCTGATCTTGCAAATTTGGTGAATGAAGCTGCTTTGTTGGCCGGAAGACAAAGCAAGGTTGTTGTGGAAAAGATTGATTTCATTCAGGCTGTGGAGAGATCAATAGCTGGAATCGAAAAGAAGACTGCCAAGTTGCAGGGATGTGAGAAGGGTGTAGTTGCACGACATGAAGCTGGTCATGCAGTTGTAGGGACAGCTATTGCAAGTCTTGTTCCTGGACAGCCACGTGTTGAGAAATTGAGCATATTGCCAAGGACAGGAGGGGCATTGGGCTTTACTTATACTCCTCCAGCAACTGAAGATAGATATTTACTATTCATTGATGAGTTACGTGGACGTTTAGTTACACTTCTTGGAGGACGTGCAGCAGAGGAGTTTGTGTATTCAGGTCGTGTATCAACTGGAGCGCTTGATGATATACGGCGAGCCACAGAAATGGCATATAAAGCAGTATCTGAGTATGGTCTTAATGAGAACATTGGCCCTGTGTCTATAGGAACACTCTCTGCTGGTGGAATGGATGAGTCTGGTGGAATTTTTGGAAGGGATCAGGGTCACCTTGTTGATCTTGCTCAACGAGAGACTCAAGAATTGCTGCAATCTGCTATGGAGGTAGCCCTTTGTGTTGTGCGTGCTAATCCTGTTGTTTTGGAGGGCCTTGGTGCTCATTTGGAAGGTGATATTCTTCAGCTTTACTTGTCTTCTTTTCTTATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004176 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019538 GO:0031967 GO:0031975 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA FtsH_ext Peptidase_M41

Protein Analysis

792

Amino Acids

85.62

Weight (kDa)

8.56

Isoelectric Point (pI)

38.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA	PF00004	380 - 513	1.1e-43	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	538 - 580	3.8e-10	AAA+ lid domain
Peptidase_M41	PF01434	601 - 790	6.5e-33	Peptidase family M41

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007746)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47060 AT5G58870
fragaria_vesca	FvH4_3g38190 FvH4_3g38190 FvH4_3g38190
malus_domestica	MD03G1074100.v1.1 MD11G1080400.v1.1
prunus_persica	Prupe.6G060800_v2.0.a1 Prupe.6G060800_v2.0.a1 Prupe.6G060800_v2.0.a1
pyrus_communis	pycom03g05990 pycom11g06770
rosa_chinensis	RchiOBHm_Chr5g0068621
rosa_laevigata	RLG00000035985
rosa_multiflora	Rmu_co8416215.1_g000001 Rmu_sc0000376.1_g000003 Rmu_sc0004721.1_g000004
rosa_roxburghii	Rroxscaffold_1G00012250
rosa_rugosa	Rorug05G0392000
rosa_samantha	Rh5AG449600 Rh5BG467800 Rh5CG489600 Rh5DG481200
rosa_wichuraiana	Rw5G041980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1217
AatII	GACGTC	1 cut(s)	8
AccB1I	GGYRCC	2 cut(s)	157, 1262
AccBSI	CCGCTC	1 cut(s)	261
AccI	GTMKAC	1 cut(s)	1504
AccII	CGCG	5 cut(s)	99, 137, 200, 1476, 1496
AclWI	GGATC	2 cut(s)	1287, 2214
AcoI	YGGCCR	1 cut(s)	1698
AcsI	RAATTY	4 cut(s)	58, 1082, 1672, 2193
AcuI	CTGAAG	3 cut(s)	1224, 1977, 2330
AcvI	CACGTG	1 cut(s)	1886
AcyI	GRCGYC	5 cut(s)	5, 158, 329, 359, 797
AfaI	GTAC	1 cut(s)	1209
AfeI	AGCGCT	2 cut(s)	851, 2067
AfiI	CCNNNNNNNGG	6 cut(s)	74, 530, 543, 1133, 1163, 1916
AflIII	ACRYGT	1 cut(s)	1885
AgeI	ACCGGT	1 cut(s)	921
AgsI	TTSAA	4 cut(s)	107, 127, 1405, 1538
AjiI	CACGTC	1 cut(s)	2021
AjnI	CCWGG	5 cut(s)	606, 776, 1156, 1507, 1873
AjuI	GAANNNNNNNTTGG	2 cut(s)	62, 94
AloI	GAACNNNNNNTCC	2 cut(s)	179, 211
Alw21I	GWGCWC	3 cut(s)	350, 1123, 2326
Alw26I	GTCTC	1 cut(s)	2234
AlwI	GGATC	2 cut(s)	1287, 2214
AlwNI	CAGNNNCTG	2 cut(s)	1955, 2114
Ama87I	CYCGRG	2 cut(s)	530, 541
Aor51HI	AGCGCT	2 cut(s)	851, 2067
AoxI	GGCC	7 cut(s)	263, 512, 545, 779, 1698, 2140, 2314
ApeKI	GCWGC	5 cut(s)	144, 433, 1688, 2024, 2254
ApoI	RAATTY	4 cut(s)	58, 1082, 1672, 2193
AsiGI	ACCGGT	1 cut(s)	921
Asp700I	GAANNNNTTC	3 cut(s)	194, 1086, 1566
AspLEI	GCGC	6 cut(s)	160, 202, 852, 1478, 1498, 2068
AspS9I	GGNCC	6 cut(s)	263, 513, 534, 837, 2141, 2314
AsuC2I	CCSGG	5 cut(s)	131, 516, 531, 532, 842
AsuHPI	GGTGA	6 cut(s)	683, 700, 1637, 1690, 2207, 2348
AsuII	TTCGAA	2 cut(s)	62, 410
AvaI	CYCGRG	2 cut(s)	530, 541
AvaII	GGWCC	2 cut(s)	534, 837
BanI	GGYRCC	2 cut(s)	157, 1262
BanII	GRGCYC	3 cut(s)	350, 666, 986
BarI	GAAGNNNNNNTAC	2 cut(s)	1191, 1223
BauI	CACGAG	1 cut(s)	1269
BbrPI	CACGTG	1 cut(s)	1886
BbsI	GAAGAC	4 cut(s)	1145, 1711, 1787, 2352
Bbv12I	GWGCWC	3 cut(s)	350, 1123, 2326
BbvI	GCAGC	5 cut(s)	131, 445, 1675, 2036, 2241
BccI	CCATC	4 cut(s)	623, 1352, 1417, 1421
BceAI	ACGGC	4 cut(s)	337, 556, 784, 2096
BciT130I	CCWGG	5 cut(s)	608, 778, 1158, 1509, 1875
BcnI	CCSGG	5 cut(s)	131, 516, 531, 532, 842
BcoDI	GTCTC	1 cut(s)	2234
BfaI	CTAG	4 cut(s)	45, 117, 1067, 1230
BfmI	CTRYAG	1 cut(s)	2151
BfoI	RGCGCY	3 cut(s)	161, 853, 2069
BisI	GCNGC	9 cut(s)	145, 156, 336, 353, 434, 548, 1689, 2025, 2255
BlsI	GCNGC	9 cut(s)	146, 157, 337, 354, 435, 549, 1690, 2026, 2256
Bme18I	GGWCC	2 cut(s)	534, 837
BmeT110I	CYCGRG	2 cut(s)	530, 541
BmgBI	CACGTC	1 cut(s)	2021
BmgT120I	GGNCC	6 cut(s)	263, 513, 534, 837, 2141, 2314
BmiI	GGNNCC	9 cut(s)	159, 535, 663, 747, 838, 839, 926, 985, 1264
BmrI	ACTGGG	2 cut(s)	987, 1665
BmsI	GCATC	2 cut(s)	801, 1327
BmuI	ACTGGG	2 cut(s)	987, 1665
BpiI	GAAGAC	4 cut(s)	1145, 1711, 1787, 2352
BpmI	CTGGAG	2 cut(s)	1932, 2082
Bpu10I	CCTNAGC	1 cut(s)	450
Bpu14I	TTCGAA	2 cut(s)	62, 410
BpuEI	CTTGAG	2 cut(s)	836, 2229
BpuMI	CCSGG	5 cut(s)	131, 516, 531, 532, 842
BsaAI	YACGTR	2 cut(s)	1886, 1991
BsaHI	GRCGYC	5 cut(s)	5, 158, 329, 359, 797
BsaWI	WCCGGW	2 cut(s)	921, 986
Bsc4I	CCNNNNNNNGG	6 cut(s)	74, 530, 543, 1133, 1163, 1916
Bse118I	RCCGGY	3 cut(s)	331, 355, 921
Bse1I	ACTGG	3 cut(s)	982, 1660, 2065
Bse3DI	GCAATG	3 cut(s)	882, 1387, 1629
BseBI	CCWGG	5 cut(s)	608, 778, 1158, 1509, 1875
BseGI	GGATG	3 cut(s)	1432, 1805, 2185
BseLI	CCNNNNNNNGG	6 cut(s)	74, 530, 543, 1133, 1163, 1916
BseMI	GCAATG	3 cut(s)	882, 1387, 1629
BseMII	CTCAG	6 cut(s)	125, 464, 956, 1410, 1458, 2106
BseNI	ACTGG	3 cut(s)	982, 1660, 2065
BseRI	GAGGAG	7 cut(s)	235, 385, 390, 769, 1076, 1935, 2045
BseXI	GCAGC	5 cut(s)	131, 445, 1675, 2036, 2241
BseYI	CCCAGC	1 cut(s)	1193
BsgI	GTGCAG	3 cut(s)	464, 632, 2043
Bsh1236I	CGCG	5 cut(s)	99, 137, 200, 1476, 1496
BshFI	GGCC	7 cut(s)	265, 514, 547, 781, 1700, 2142, 2316
BshNI	GGYRCC	2 cut(s)	157, 1262
BshTI	ACCGGT	1 cut(s)	921
BsiHKAI	GWGCWC	3 cut(s)	350, 1123, 2326
BsiHKCI	CYCGRG	2 cut(s)	530, 541
BslFI	GGGAC	3 cut(s)	823, 1174, 1864
BslI	CCNNNNNNNGG	6 cut(s)	74, 530, 543, 1133, 1163, 1916
BsmAI	GTCTC	1 cut(s)	2234
BsmFI	GGGAC	3 cut(s)	823, 1174, 1864
BsnI	GGCC	7 cut(s)	265, 514, 547, 781, 1700, 2142, 2316
BsoBI	CYCGRG	2 cut(s)	530, 541
Bsp119I	TTCGAA	2 cut(s)	62, 410
Bsp1286I	GDGCHC	5 cut(s)	350, 666, 986, 1123, 2326
Bsp143I	GATC	6 cut(s)	1279, 1519, 1663, 1757, 2206, 2224
BspANI	GGCC	7 cut(s)	265, 514, 547, 781, 1700, 2142, 2316
BspCNI	CTCAG	6 cut(s)	124, 463, 955, 1411, 1457, 2107
BspFNI	CGCG	5 cut(s)	99, 137, 200, 1476, 1496
BspHI	TCATGA	1 cut(s)	864
BspLI	GGNNCC	9 cut(s)	159, 535, 663, 747, 838, 839, 926, 985, 1264
BspPI	GGATC	2 cut(s)	1287, 2214
BspQI	GCTCTTC	1 cut(s)	281
BspT104I	TTCGAA	2 cut(s)	62, 410
BspT107I	GGYRCC	2 cut(s)	157, 1262
BsrBI	CCGCTC	1 cut(s)	261
BsrDI	GCAATG	3 cut(s)	882, 1387, 1629
BsrFI	RCCGGY	3 cut(s)	331, 355, 921
BsrI	ACTGG	3 cut(s)	982, 1660, 2065
BssAI	RCCGGY	3 cut(s)	331, 355, 921
BssMI	GATC	6 cut(s)	1279, 1519, 1663, 1757, 2206, 2224
BssNI	GRCGYC	5 cut(s)	5, 158, 329, 359, 797
BssSI	CACGAG	1 cut(s)	1269
BssT1I	CCWWGG	3 cut(s)	1621, 1910, 2317
Bst2BI	CACGAG	1 cut(s)	1269
Bst2UI	CCWGG	5 cut(s)	608, 778, 1158, 1509, 1875
Bst4CI	ACNGT	4 cut(s)	16, 181, 244, 1311
Bst6I	CTCTTC	3 cut(s)	281, 1179, 1552
BstACI	GRCGYC	5 cut(s)	5, 158, 329, 359, 797
BstBAI	YACGTR	2 cut(s)	1886, 1991
BstBI	TTCGAA	2 cut(s)	62, 410
BstDEI	CTNAG	6 cut(s)	111, 450, 942, 1419, 1444, 2115
BstDSI	CCRYGG	2 cut(s)	97, 1132
BstEII	GGTNACC	1 cut(s)	2213
BstENI	CCTNNNNNAGG	1 cut(s)	1161
BstF5I	GGATG	3 cut(s)	1432, 1805, 2185
BstFNI	CGCG	5 cut(s)	99, 137, 200, 1476, 1496
BstH2I	RGCGCY	3 cut(s)	161, 853, 2069
BstHHI	GCGC	6 cut(s)	160, 202, 852, 1478, 1498, 2068
BstKTI	GATC	6 cut(s)	1282, 1522, 1666, 1760, 2209, 2227
BstMAI	GTCTC	1 cut(s)	2234
BstMBI	GATC	6 cut(s)	1279, 1519, 1663, 1757, 2206, 2224
BstNI	CCWGG	5 cut(s)	608, 778, 1158, 1509, 1875
BstNSI	RCATGY	1 cut(s)	1583
BstPI	GGTNACC	1 cut(s)	2213
BstSFI	CTRYAG	1 cut(s)	2151
BstUI	CGCG	5 cut(s)	99, 137, 200, 1476, 1496
BstV1I	GCAGC	5 cut(s)	131, 445, 1675, 2036, 2241
BstV2I	GAAGAC	4 cut(s)	1145, 1711, 1787, 2352
BstX2I	RGATCY	1 cut(s)	1279
BstXI	CCANNNNNNTGG	1 cut(s)	2095
BstYI	RGATCY	1 cut(s)	1279
BsuRI	GGCC	7 cut(s)	265, 514, 547, 781, 1700, 2142, 2316
BtgI	CCRYGG	2 cut(s)	97, 1132
BtrI	CACGTC	1 cut(s)	2021
BtsCI	GGATG	3 cut(s)	1432, 1805, 2185
BtsIMutI	CAGTG	1 cut(s)	1416
CaiI	CAGNNNCTG	2 cut(s)	1955, 2114
CciI	TCATGA	1 cut(s)	864
CfoI	GCGC	6 cut(s)	160, 202, 852, 1478, 1498, 2068
Cfr10I	RCCGGY	3 cut(s)	331, 355, 921
Cfr13I	GGNCC	6 cut(s)	263, 513, 534, 837, 2141, 2314
Cfr42I	CCGCGG	1 cut(s)	100
Cfr9I	CCCGGG	1 cut(s)	530
CseI	GACGC	4 cut(s)	143, 337, 348, 805
CsiI	ACCWGGT	1 cut(s)	606
Csp6I	GTAC	1 cut(s)	1208
CspAI	ACCGGT	1 cut(s)	921
CspCI	CAANNNNNGTGG	2 cut(s)	1170, 1205
CviAII	CATG	6 cut(s)	638, 865, 1258, 1580, 1826, 1838
CviQI	GTAC	1 cut(s)	1208
DdeI	CTNAG	6 cut(s)	111, 450, 942, 1419, 1444, 2115
DinI	GGCGCC	1 cut(s)	159
DpnI	GATC	6 cut(s)	1281, 1521, 1665, 1759, 2208, 2226
DpnII	GATC	6 cut(s)	1279, 1519, 1663, 1757, 2206, 2224
EaeI	YGGCCR	1 cut(s)	1698
Eam1104I	CTCTTC	3 cut(s)	281, 1179, 1552
EarI	CTCTTC	3 cut(s)	281, 1179, 1552
Ecl136II	GAGCTC	1 cut(s)	348
Eco130I	CCWWGG	3 cut(s)	1621, 1910, 2317
Eco24I	GRGCYC	3 cut(s)	350, 666, 986
Eco32I	GATATC	1 cut(s)	790
Eco47I	GGWCC	2 cut(s)	534, 837
Eco47III	AGCGCT	2 cut(s)	851, 2067
Eco53kI	GAGCTC	1 cut(s)	348
Eco57I	CTGAAG	3 cut(s)	1224, 1977, 2330
Eco72I	CACGTG	1 cut(s)	1886
Eco88I	CYCGRG	2 cut(s)	530, 541
Eco91I	GGTNACC	1 cut(s)	2213
EcoICRI	GAGCTC	1 cut(s)	348
EcoNI	CCTNNNNNAGG	1 cut(s)	1161
EcoO109I	RGGNCCY	2 cut(s)	837, 2314
EcoO65I	GGTNACC	1 cut(s)	2213
EcoRII	CCWGG	5 cut(s)	606, 776, 1156, 1507, 1873
EcoRV	GATATC	1 cut(s)	790
EcoT14I	CCWWGG	3 cut(s)	1621, 1910, 2317
EcoT38I	GRGCYC	3 cut(s)	350, 666, 986
EgeI	GGCGCC	1 cut(s)	159
EheI	GGCGCC	1 cut(s)	159
ErhI	CCWWGG	3 cut(s)	1621, 1910, 2317
FaeI	CATG	6 cut(s)	641, 868, 1261, 1583, 1829, 1841
FaqI	GGGAC	3 cut(s)	823, 1174, 1864
FatI	CATG	6 cut(s)	637, 864, 1257, 1579, 1825, 1837
FauI	CCCGC	5 cut(s)	92, 254, 289, 673, 1501
FblI	GTMKAC	1 cut(s)	1504
Fnu4HI	GCNGC	9 cut(s)	145, 156, 336, 353, 434, 548, 1689, 2025, 2255
FokI	GGATG	3 cut(s)	1439, 1812, 2192
FriOI	GRGCYC	3 cut(s)	350, 666, 986
Fsp4HI	GCNGC	9 cut(s)	145, 156, 336, 353, 434, 548, 1689, 2025, 2255
FspBI	CTAG	4 cut(s)	45, 117, 1067, 1230
GlaI	GCGC	6 cut(s)	159, 201, 851, 1477, 1497, 2067
GluI	GCNGC	9 cut(s)	145, 156, 336, 353, 434, 548, 1689, 2025, 2255
GsaI	CCCAGC	1 cut(s)	1197
GsuI	CTGGAG	2 cut(s)	1932, 2082
HaeII	RGCGCY	3 cut(s)	161, 853, 2069
HaeIII	GGCC	7 cut(s)	265, 514, 547, 781, 1700, 2142, 2316
HgaI	GACGC	4 cut(s)	143, 337, 348, 805
HhaI	GCGC	6 cut(s)	160, 202, 852, 1478, 1498, 2068
Hin1I	GRCGYC	5 cut(s)	5, 158, 329, 359, 797
Hin1II	CATG	6 cut(s)	641, 868, 1261, 1583, 1829, 1841
Hin6I	GCGC	6 cut(s)	158, 200, 850, 1476, 1496, 2066
HinP1I	GCGC	6 cut(s)	158, 200, 850, 1476, 1496, 2066
HincII	GTYRAC	2 cut(s)	1048, 1505
HindII	GTYRAC	2 cut(s)	1048, 1505
HindIII	AAGCTT	1 cut(s)	934
HphI	GGTGA	6 cut(s)	683, 700, 1637, 1690, 2207, 2348
Hpy166II	GTNNAC	5 cut(s)	319, 1048, 1505, 1618, 1994
Hpy188III	TCNNGA	8 cut(s)	166, 452, 716, 793, 865, 1097, 1355, 2246
Hpy8I	GTNNAC	5 cut(s)	319, 1048, 1505, 1618, 1994
Hpy99I	CGWCG	6 cut(s)	16, 364, 556, 559, 754, 1506
HpyAV	CCTTC	7 cut(s)	163, 296, 385, 610, 1801, 2196, 2327
HpyCH4III	ACNGT	4 cut(s)	16, 181, 244, 1311
HpyCH4IV	ACGT	8 cut(s)	5, 28, 557, 1614, 1885, 1990, 1996, 2020
HpyF3I	CTNAG	6 cut(s)	111, 450, 942, 1419, 1444, 2115
HpySE526I	ACGT	8 cut(s)	5, 28, 557, 1614, 1885, 1990, 1996, 2020
Hsp92I	GRCGYC	5 cut(s)	5, 158, 329, 359, 797
Hsp92II	CATG	6 cut(s)	641, 868, 1261, 1583, 1829, 1841
HspAI	GCGC	6 cut(s)	158, 200, 850, 1476, 1496, 2066
KasI	GGCGCC	1 cut(s)	157
KflI	GGGWCCC	1 cut(s)	837
KroI	GCCGGC	2 cut(s)	331, 355
KroNI	GCCGGC	2 cut(s)	333, 357
KspI	CCGCGG	1 cut(s)	100
Kzo9I	GATC	6 cut(s)	1279, 1519, 1663, 1757, 2206, 2224
LguI	GCTCTTC	1 cut(s)	281
LmnI	GCTCC	8 cut(s)	513, 661, 751, 989, 1063, 1243, 1463, 2063
Lsp1109I	GCAGC	5 cut(s)	131, 445, 1675, 2036, 2241
LweI	GCATC	2 cut(s)	801, 1327
MabI	ACCWGGT	1 cut(s)	606
MaeI	CTAG	4 cut(s)	45, 117, 1067, 1230
MaeII	ACGT	8 cut(s)	5, 28, 557, 1614, 1885, 1990, 1996, 2020
MaeIII	GTNAC	7 cut(s)	212, 578, 1582, 1625, 1986, 2002, 2213
MalI	GATC	6 cut(s)	1281, 1521, 1665, 1759, 2208, 2226
MbiI	CCGCTC	1 cut(s)	261
MboI	GATC	6 cut(s)	1279, 1519, 1663, 1757, 2206, 2224
MflI	RGATCY	1 cut(s)	1279
MhlI	GDGCHC	5 cut(s)	350, 666, 986, 1123, 2326
MluCI	AATT	8 cut(s)	58, 1074, 1082, 1566, 1672, 1895, 2193, 2249
Mly113I	GGCGCC	1 cut(s)	158
MlyI	GAGTC	4 cut(s)	728, 1165, 2192, 2236
MmeI	TCCRAC	2 cut(s)	561, 773
MreI	CGCCGGCG	2 cut(s)	331, 355
MroNI	GCCGGC	2 cut(s)	331, 355
MroXI	GAANNNNTTC	3 cut(s)	194, 1086, 1566
MseI	TTAA	4 cut(s)	56, 648, 734, 2127
MslI	CAYNNNNRTG	2 cut(s)	1421, 2093
MspA1I	CMGCKG	3 cut(s)	99, 668, 953
MvaI	CCWGG	5 cut(s)	608, 778, 1158, 1509, 1875
MvnI	CGCG	5 cut(s)	99, 137, 200, 1476, 1496
NaeI	GCCGGC	2 cut(s)	333, 357
NarI	GGCGCC	1 cut(s)	158
NciI	CCSGG	5 cut(s)	131, 516, 531, 532, 842
NdeII	GATC	6 cut(s)	1279, 1519, 1663, 1757, 2206, 2224
NgoMIV	GCCGGC	2 cut(s)	331, 355
NlaIII	CATG	6 cut(s)	641, 868, 1261, 1583, 1829, 1841
NlaIV	GGNNCC	9 cut(s)	159, 535, 663, 747, 838, 839, 926, 985, 1264
NmuCI	GTSAC	3 cut(s)	578, 1625, 2213
NspI	RCATGY	1 cut(s)	1583
NspV	TTCGAA	2 cut(s)	62, 410
PagI	TCATGA	1 cut(s)	864
PciSI	GCTCTTC	1 cut(s)	281
PcsI	WCGNNNNNNNCGW	3 cut(s)	335, 356, 1129
PdiI	GCCGGC	2 cut(s)	333, 357
PdmI	GAANNNNTTC	3 cut(s)	194, 1086, 1566
PfoI	TCCNGGA	1 cut(s)	1873
PinAI	ACCGGT	1 cut(s)	921
PkrI	GCNGC	9 cut(s)	146, 157, 337, 354, 435, 549, 1690, 2026, 2256
PleI	GAGTC	4 cut(s)	727, 1165, 2191, 2236
PluTI	GGCGCC	1 cut(s)	161
PmaCI	CACGTG	1 cut(s)	1886
PmlI	CACGTG	1 cut(s)	1886
PpsI	GAGTC	4 cut(s)	727, 1165, 2191, 2236
Ppu21I	YACGTR	2 cut(s)	1886, 1991
PpuMI	RGGWCCY	1 cut(s)	837
PsiI	TTATAA	1 cut(s)	1217
Psp124BI	GAGCTC	1 cut(s)	350
Psp5II	RGGWCCY	1 cut(s)	837
Psp6I	CCWGG	5 cut(s)	606, 776, 1156, 1507, 1873
PspCI	CACGTG	1 cut(s)	1886
PspEI	GGTNACC	1 cut(s)	2213
PspFI	CCCAGC	1 cut(s)	1193
PspGI	CCWGG	5 cut(s)	606, 776, 1156, 1507, 1873
PspN4I	GGNNCC	9 cut(s)	159, 535, 663, 747, 838, 839, 926, 985, 1264
PspPI	GGNCC	6 cut(s)	263, 513, 534, 837, 2141, 2314
PspPPI	RGGWCCY	1 cut(s)	837
PstNI	CAGNNNCTG	2 cut(s)	1955, 2114
PsuI	RGATCY	1 cut(s)	1279
PvuII	CAGCTG	1 cut(s)	953
RsaI	GTAC	1 cut(s)	1209
RsaNI	GTAC	1 cut(s)	1208
RseI	CAYNNNNRTG	2 cut(s)	1421, 2093
SacI	GAGCTC	1 cut(s)	350
SacII	CCGCGG	1 cut(s)	100
SalI	GTCGAC	1 cut(s)	1503
SapI	GCTCTTC	1 cut(s)	281
SaqAI	TTAA	4 cut(s)	56, 648, 734, 2127
SatI	GCNGC	9 cut(s)	145, 156, 336, 353, 434, 548, 1689, 2025, 2255
Sau3AI	GATC	6 cut(s)	1279, 1519, 1663, 1757, 2206, 2224
Sau96I	GGNCC	6 cut(s)	263, 513, 534, 837, 2141, 2314
SchI	GAGTC	4 cut(s)	728, 1165, 2192, 2236
SduI	GDGCHC	5 cut(s)	350, 666, 986, 1123, 2326
SexAI	ACCWGGT	1 cut(s)	606
SfaNI	GCATC	2 cut(s)	801, 1327
SfcI	CTRYAG	1 cut(s)	2151
SfoI	GGCGCC	1 cut(s)	159
Sfr303I	CCGCGG	1 cut(s)	100
SfuI	TTCGAA	2 cut(s)	62, 410
SgrAI	CRCCGGYG	2 cut(s)	331, 355
SgrBI	CCGCGG	1 cut(s)	100
SinI	GGWCC	2 cut(s)	534, 837
SmaI	CCCGGG	1 cut(s)	532
SmiMI	CAYNNNNRTG	2 cut(s)	1421, 2093
SmlI	CTYRAG	2 cut(s)	815, 2244
SmoI	CTYRAG	2 cut(s)	815, 2244
Sse9I	AATT	8 cut(s)	58, 1074, 1082, 1566, 1672, 1895, 2193, 2249
SspDI	GGCGCC	1 cut(s)	157
SspI	AATATT	1 cut(s)	1320
SspMI	CTAG	4 cut(s)	45, 117, 1067, 1230
SstI	GAGCTC	1 cut(s)	350
StyI	CCWWGG	3 cut(s)	1621, 1910, 2317
TaaI	ACNGT	4 cut(s)	16, 181, 244, 1311
TaiI	ACGT	8 cut(s)	8, 31, 560, 1617, 1888, 1993, 1999, 2023
TaqI	TCGA	6 cut(s)	11, 62, 362, 410, 1504, 1773
TasI	AATT	8 cut(s)	58, 1074, 1082, 1566, 1672, 1895, 2193, 2249
TauI	GCSGC	4 cut(s)	158, 338, 355, 550
Tru1I	TTAA	4 cut(s)	56, 648, 734, 2127
Tru9I	TTAA	4 cut(s)	56, 648, 734, 2127
TscAI	CASTG	1 cut(s)	1423
TseFI	GTSAC	3 cut(s)	578, 1625, 2213
TseI	GCWGC	5 cut(s)	144, 433, 1688, 2024, 2254
Tsp45I	GTSAC	3 cut(s)	578, 1625, 2213
TspDTI	ATGAA	7 cut(s)	626, 853, 881, 1698, 1729, 1842, 1966
TspGWI	ACGGA	2 cut(s)	90, 243
TspMI	CCCGGG	1 cut(s)	530
TspRI	CASTG	1 cut(s)	1423
VpaK11BI	GGWCC	2 cut(s)	534, 837
XagI	CCTNNNNNAGG	1 cut(s)	1161
XapI	RAATTY	4 cut(s)	58, 1082, 1672, 2193
XceI	RCATGY	1 cut(s)	1583
XmaI	CCCGGG	1 cut(s)	530
XmiI	GTMKAC	1 cut(s)	1504
XmnI	GAANNNNTTC	3 cut(s)	194, 1086, 1566
XspI	CTAG	4 cut(s)	45, 117, 1067, 1230
ZraI	GACGTC	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.