Belongs to the short-chain dehydrogenases reductases (SDR) family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G47350 AT3G47350 AT3G47350 AT3G47360 AT5G50590 AT5G50590 AT5G50690 AT5G50690 |
| fragaria_vesca | FvH4_5g08710 |
| malus_domestica | MD14G1152900.v1.1 |
| prunus_persica | Prupe.5G148000_v2.0.a1 |
| pyrus_communis | pycom14g12740 |
| rosa_chinensis | RchiOBHm_Chr7g0189561 |
| rosa_laevigata | RLG00000004600 |
| rosa_multiflora | Rmu_sc0001924.1_g000013 |
| rosa_roxburghii | Rroxscaffold_3G00265300 |
| rosa_rugosa | Rorug06G0499000 |
| rosa_samantha | Rh7AG104000 Rh7BG106700 Rh7CG108800 Rh7DG106100 |
| rosa_wichuraiana | Rw7G008980 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 842 |
| Acc16I | TGCGCA | 1 cut(s) | 766 |
| AccII | CGCG | 1 cut(s) | 542 |
| AclWI | GGATC | 2 cut(s) | 252, 292 |
| AcsI | RAATTY | 1 cut(s) | 438 |
| AcuI | CTGAAG | 1 cut(s) | 763 |
| AfaI | GTAC | 1 cut(s) | 481 |
| AgsI | TTSAA | 3 cut(s) | 410, 443, 919 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 360 |
| AjiI | CACGTC | 1 cut(s) | 275 |
| AjnI | CCWGG | 2 cut(s) | 307, 676 |
| AluBI | AGCT | 2 cut(s) | 164, 643 |
| AluI | AGCT | 2 cut(s) | 164, 643 |
| Alw26I | GTCTC | 3 cut(s) | 347, 620, 794 |
| AlwI | GGATC | 2 cut(s) | 252, 292 |
| ApeKI | GCWGC | 2 cut(s) | 593, 605 |
| ApoI | RAATTY | 1 cut(s) | 438 |
| AspLEI | GCGC | 1 cut(s) | 767 |
| AsuHPI | GGTGA | 3 cut(s) | 148, 323, 484 |
| AsuII | TTCGAA | 3 cut(s) | 126, 423, 517 |
| BbsI | GAAGAC | 1 cut(s) | 98 |
| BbvI | GCAGC | 2 cut(s) | 605, 617 |
| BccI | CCATC | 1 cut(s) | 826 |
| BciT130I | CCWGG | 2 cut(s) | 309, 678 |
| BclI | TGATCA | 2 cut(s) | 87, 387 |
| BcoDI | GTCTC | 3 cut(s) | 347, 620, 794 |
| BfaI | CTAG | 2 cut(s) | 251, 377 |
| BisI | GCNGC | 2 cut(s) | 594, 606 |
| BlsI | GCNGC | 2 cut(s) | 595, 607 |
| Bme1390I | CCNGG | 2 cut(s) | 309, 678 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 360 |
| BmgBI | CACGTC | 1 cut(s) | 275 |
| BmrFI | CCNGG | 2 cut(s) | 309, 678 |
| BmsI | GCATC | 2 cut(s) | 183, 594 |
| BpiI | GAAGAC | 1 cut(s) | 98 |
| Bpu14I | TTCGAA | 3 cut(s) | 126, 423, 517 |
| Bsa29I | ATCGAT | 1 cut(s) | 348 |
| BsaJI | CCNNGG | 1 cut(s) | 676 |
| BsaWI | WCCGGW | 1 cut(s) | 158 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 171, 201 |
| BseBI | CCWGG | 2 cut(s) | 309, 678 |
| BseCI | ATCGAT | 1 cut(s) | 348 |
| BseDI | CCNNGG | 1 cut(s) | 676 |
| BseGI | GGATG | 1 cut(s) | 831 |
| BseRI | GAGGAG | 3 cut(s) | 30, 696, 810 |
| BseXI | GCAGC | 2 cut(s) | 605, 617 |
| Bsh1236I | CGCG | 1 cut(s) | 542 |
| BshVI | ATCGAT | 1 cut(s) | 348 |
| BsiSI | CCGG | 1 cut(s) | 159 |
| BslFI | GGGAC | 1 cut(s) | 843 |
| BsmAI | GTCTC | 3 cut(s) | 347, 620, 794 |
| BsmBI | CGTCTC | 1 cut(s) | 347 |
| BsmFI | GGGAC | 1 cut(s) | 843 |
| Bsp119I | TTCGAA | 3 cut(s) | 126, 423, 517 |
| Bsp143I | GATC | 4 cut(s) | 87, 244, 284, 387 |
| Bsp68I | TCGCGA | 1 cut(s) | 542 |
| BspDI | ATCGAT | 1 cut(s) | 348 |
| BspFNI | CGCG | 1 cut(s) | 542 |
| BspPI | GGATC | 2 cut(s) | 252, 292 |
| BspT104I | TTCGAA | 3 cut(s) | 126, 423, 517 |
| BssECI | CCNNGG | 1 cut(s) | 676 |
| BssMI | GATC | 4 cut(s) | 87, 244, 284, 387 |
| Bst2UI | CCWGG | 2 cut(s) | 309, 678 |
| Bst4CI | ACNGT | 2 cut(s) | 415, 713 |
| Bst6I | CTCTTC | 1 cut(s) | 65 |
| BstBI | TTCGAA | 3 cut(s) | 126, 423, 517 |
| BstC8I | GCNNGC | 2 cut(s) | 583, 598 |
| BstDEI | CTNAG | 1 cut(s) | 644 |
| BstF5I | GGATG | 1 cut(s) | 831 |
| BstFNI | CGCG | 1 cut(s) | 542 |
| BstHHI | GCGC | 1 cut(s) | 767 |
| BstKTI | GATC | 4 cut(s) | 90, 247, 287, 390 |
| BstMAI | GTCTC | 3 cut(s) | 347, 620, 794 |
| BstMBI | GATC | 4 cut(s) | 87, 244, 284, 387 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 221, 230, 602 |
| BstNI | CCWGG | 2 cut(s) | 309, 678 |
| BstNSI | RCATGY | 1 cut(s) | 188 |
| BstSCI | CCNGG | 2 cut(s) | 307, 676 |
| BstUI | CGCG | 1 cut(s) | 542 |
| BstV1I | GCAGC | 2 cut(s) | 605, 617 |
| BstV2I | GAAGAC | 1 cut(s) | 98 |
| BstX2I | RGATCY | 1 cut(s) | 284 |
| BstYI | RGATCY | 1 cut(s) | 284 |
| Bsu15I | ATCGAT | 1 cut(s) | 348 |
| BsuTUI | ATCGAT | 1 cut(s) | 348 |
| BtrI | CACGTC | 1 cut(s) | 275 |
| BtsCI | GGATG | 1 cut(s) | 831 |
| BtsIMutI | CAGTG | 2 cut(s) | 709, 759 |
| BtuMI | TCGCGA | 1 cut(s) | 542 |
| Cac8I | GCNNGC | 2 cut(s) | 583, 598 |
| CfoI | GCGC | 1 cut(s) | 767 |
| ClaI | ATCGAT | 1 cut(s) | 348 |
| CseI | GACGC | 1 cut(s) | 455 |
| CsiI | ACCWGGT | 1 cut(s) | 307 |
| Csp6I | GTAC | 1 cut(s) | 480 |
| CviAII | CATG | 1 cut(s) | 185 |
| CviJI | RGCY | 6 cut(s) | 137, 164, 224, 608, 643, 835 |
| CviKI_1 | RGCY | 6 cut(s) | 137, 164, 224, 608, 643, 835 |
| CviQI | GTAC | 1 cut(s) | 480 |
| DdeI | CTNAG | 1 cut(s) | 644 |
| DpnI | GATC | 4 cut(s) | 89, 246, 286, 389 |
| DpnII | GATC | 4 cut(s) | 87, 244, 284, 387 |
| DriI | GACNNNNNGTC | 1 cut(s) | 360 |
| Eam1104I | CTCTTC | 1 cut(s) | 65 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 360 |
| EarI | CTCTTC | 1 cut(s) | 65 |
| Eco32I | GATATC | 1 cut(s) | 655 |
| Eco57I | CTGAAG | 1 cut(s) | 763 |
| EcoRII | CCWGG | 2 cut(s) | 307, 676 |
| EcoRV | GATATC | 1 cut(s) | 655 |
| Esp3I | CGTCTC | 1 cut(s) | 347 |
| FaeI | CATG | 1 cut(s) | 188 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 761, 793 |
| FaqI | GGGAC | 1 cut(s) | 843 |
| FatI | CATG | 1 cut(s) | 184 |
| FbaI | TGATCA | 2 cut(s) | 87, 387 |
| Fnu4HI | GCNGC | 2 cut(s) | 594, 606 |
| FokI | GGATG | 1 cut(s) | 838 |
| Fsp4HI | GCNGC | 2 cut(s) | 594, 606 |
| FspBI | CTAG | 2 cut(s) | 251, 377 |
| FspI | TGCGCA | 1 cut(s) | 766 |
| GlaI | GCGC | 1 cut(s) | 766 |
| GluI | GCNGC | 2 cut(s) | 594, 606 |
| HapII | CCGG | 1 cut(s) | 159 |
| HgaI | GACGC | 1 cut(s) | 455 |
| HhaI | GCGC | 1 cut(s) | 767 |
| Hin1II | CATG | 1 cut(s) | 188 |
| Hin6I | GCGC | 1 cut(s) | 765 |
| HinP1I | GCGC | 1 cut(s) | 765 |
| HinfI | GANTC | 3 cut(s) | 358, 618, 749 |
| HpaII | CCGG | 1 cut(s) | 159 |
| HphI | GGTGA | 3 cut(s) | 148, 323, 484 |
| Hpy188I | TCNGA | 5 cut(s) | 179, 371, 733, 748, 782 |
| Hpy188III | TCNNGA | 5 cut(s) | 251, 443, 541, 650, 860 |
| Hpy99I | CGWCG | 1 cut(s) | 542 |
| HpyAV | CCTTC | 2 cut(s) | 128, 234 |
| HpyCH4III | ACNGT | 2 cut(s) | 415, 713 |
| HpyCH4IV | ACGT | 2 cut(s) | 132, 274 |
| HpyCH4V | TGCA | 3 cut(s) | 336, 503, 593 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 221, 230, 602 |
| HpyF3I | CTNAG | 1 cut(s) | 644 |
| HpySE526I | ACGT | 2 cut(s) | 132, 274 |
| Hsp92II | CATG | 1 cut(s) | 188 |
| HspAI | GCGC | 1 cut(s) | 765 |
| Ksp22I | TGATCA | 2 cut(s) | 87, 387 |
| Kzo9I | GATC | 4 cut(s) | 87, 244, 284, 387 |
| LmnI | GCTCC | 2 cut(s) | 161, 212 |
| Lsp1109I | GCAGC | 2 cut(s) | 605, 617 |
| LweI | GCATC | 2 cut(s) | 183, 594 |
| MabI | ACCWGGT | 1 cut(s) | 307 |
| MaeI | CTAG | 2 cut(s) | 251, 377 |
| MaeII | ACGT | 2 cut(s) | 132, 274 |
| MalI | GATC | 4 cut(s) | 89, 246, 286, 389 |
| MboI | GATC | 4 cut(s) | 87, 244, 284, 387 |
| MfeI | CAATTG | 1 cut(s) | 666 |
| MflI | RGATCY | 1 cut(s) | 284 |
| MluCI | AATT | 4 cut(s) | 278, 438, 504, 666 |
| MnlI | CCTC | 8 cut(s) | 48, 51, 178, 322, 519, 717, 776, 788 |
| MseI | TTAA | 3 cut(s) | 614, 632, 882 |
| MspI | CCGG | 1 cut(s) | 159 |
| MspR9I | CCNGG | 2 cut(s) | 309, 678 |
| MunI | CAATTG | 1 cut(s) | 666 |
| MvaI | CCWGG | 2 cut(s) | 309, 678 |
| MvnI | CGCG | 1 cut(s) | 542 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 221, 230, 602 |
| NdeII | GATC | 4 cut(s) | 87, 244, 284, 387 |
| NlaIII | CATG | 1 cut(s) | 188 |
| NruI | TCGCGA | 1 cut(s) | 542 |
| NsbI | TGCGCA | 1 cut(s) | 766 |
| NspI | RCATGY | 1 cut(s) | 188 |
| NspV | TTCGAA | 3 cut(s) | 126, 423, 517 |
| PfeI | GAWTC | 3 cut(s) | 358, 618, 749 |
| PkrI | GCNGC | 2 cut(s) | 595, 607 |
| PsiI | TTATAA | 1 cut(s) | 842 |
| Psp6I | CCWGG | 2 cut(s) | 307, 676 |
| PspGI | CCWGG | 2 cut(s) | 307, 676 |
| PsuI | RGATCY | 1 cut(s) | 284 |
| RruI | TCGCGA | 1 cut(s) | 542 |
| RsaI | GTAC | 1 cut(s) | 481 |
| RsaNI | GTAC | 1 cut(s) | 480 |
| SaqAI | TTAA | 3 cut(s) | 614, 632, 882 |
| SatI | GCNGC | 2 cut(s) | 594, 606 |
| Sau3AI | GATC | 4 cut(s) | 87, 244, 284, 387 |
| ScrFI | CCNGG | 2 cut(s) | 309, 678 |
| SexAI | ACCWGGT | 1 cut(s) | 307 |
| SfaNI | GCATC | 2 cut(s) | 183, 594 |
| SfuI | TTCGAA | 3 cut(s) | 126, 423, 517 |
| Sse9I | AATT | 4 cut(s) | 278, 438, 504, 666 |
| SspMI | CTAG | 2 cut(s) | 251, 377 |
| StyD4I | CCNGG | 2 cut(s) | 307, 676 |
| TaaI | ACNGT | 2 cut(s) | 415, 713 |
| TaiI | ACGT | 2 cut(s) | 135, 277 |
| TaqI | TCGA | 5 cut(s) | 126, 235, 348, 423, 517 |
| TasI | AATT | 4 cut(s) | 278, 438, 504, 666 |
| TfiI | GAWTC | 3 cut(s) | 358, 618, 749 |
| Tru1I | TTAA | 3 cut(s) | 614, 632, 882 |
| Tru9I | TTAA | 3 cut(s) | 614, 632, 882 |
| TscAI | CASTG | 2 cut(s) | 716, 759 |
| TseI | GCWGC | 2 cut(s) | 593, 605 |
| TspDTI | ATGAA | 3 cut(s) | 334, 842, 860 |
| TspGWI | ACGGA | 1 cut(s) | 891 |
| TspRI | CASTG | 2 cut(s) | 716, 759 |
| XapI | RAATTY | 1 cut(s) | 438 |
| XbaI | TCTAGA | 1 cut(s) | 250 |
| XceI | RCATGY | 1 cut(s) | 188 |
| XspI | CTAG | 2 cut(s) | 251, 377 |