Small domain found in the jumonji family of transcription factors
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G48430 AT3G48430 |
| fragaria_vesca | FvH4_5g07090 FvH4_5g07090 FvH4_5g07090 |
| malus_domestica | MD06G1159300.v1.1 MD14G1165600.v1.1 |
| prunus_persica | Prupe.5G159200_v2.0.a1 |
| pyrus_communis | pycom06g14210 pycom14g13810 |
| rosa_chinensis | RchiOBHm_Chr7g0191461 |
| rosa_laevigata | RLG00000004448 |
| rosa_multiflora | Rmu_sc0002661.1_g000009 |
| rosa_roxburghii | Rroxscaffold_157G00438400 Rroxscaffold_3G00263790 |
| rosa_rugosa | Rorug06G0510400 |
| rosa_samantha | Rh7AG118500 Rh7BG120500 Rh7CG123300 Rh7DG121400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 2934, 3060 |
| Acc36I | ACCTGC | 2 cut(s) | 948, 1383 |
| AccB1I | GGYRCC | 1 cut(s) | 2860 |
| AccBSI | CCGCTC | 1 cut(s) | 227 |
| AccI | GTMKAC | 1 cut(s) | 3113 |
| AccII | CGCG | 2 cut(s) | 260, 295 |
| AcoI | YGGCCR | 1 cut(s) | 2053 |
| AcsI | RAATTY | 6 cut(s) | 153, 1505, 2369, 3065, 3367, 3491 |
| AcuI | CTGAAG | 5 cut(s) | 945, 1932, 2334, 3120, 4012 |
| AcvI | CACGTG | 1 cut(s) | 2209 |
| AfaI | GTAC | 6 cut(s) | 371, 800, 2297, 2513, 3120, 3397 |
| AfeI | AGCGCT | 1 cut(s) | 2488 |
| AflII | CTTAAG | 3 cut(s) | 656, 1438, 1657 |
| AflIII | ACRYGT | 2 cut(s) | 1646, 2208 |
| AgeI | ACCGGT | 2 cut(s) | 52, 4049 |
| AjnI | CCWGG | 7 cut(s) | 529, 679, 973, 1404, 2300, 2795, 3413 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 3503, 3535 |
| AleI | CACNNNNGTG | 1 cut(s) | 3861 |
| Alw21I | GWGCWC | 5 cut(s) | 870, 2340, 2582, 3146, 3948 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2999 |
| Ama87I | CYCGRG | 1 cut(s) | 2385 |
| Aor51HI | AGCGCT | 1 cut(s) | 2488 |
| AoxI | GGCC | 3 cut(s) | 1329, 2053, 3971 |
| ApoI | RAATTY | 6 cut(s) | 153, 1505, 2369, 3065, 3367, 3491 |
| ArsI | GACNNNNNNTTYG | 8 cut(s) | 236, 268, 2325, 2357, 3005, 3037, 4039, 4071 |
| AsiGI | ACCGGT | 2 cut(s) | 52, 4049 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2403 |
| AspA2I | CCTAGG | 2 cut(s) | 320, 3215 |
| AspLEI | GCGC | 7 cut(s) | 260, 297, 1615, 1915, 2489, 3968, 3986 |
| AspS9I | GGNCC | 5 cut(s) | 278, 745, 1330, 2454, 3539 |
| AsuC2I | CCSGG | 2 cut(s) | 999, 2956 |
| AvaI | CYCGRG | 1 cut(s) | 2385 |
| AvaII | GGWCC | 4 cut(s) | 278, 745, 2454, 3539 |
| AvrII | CCTAGG | 2 cut(s) | 320, 3215 |
| BalI | TGGCCA | 1 cut(s) | 2055 |
| BamHI | GGATCC | 2 cut(s) | 1319, 1385 |
| BanI | GGYRCC | 1 cut(s) | 2860 |
| BanII | GRGCYC | 4 cut(s) | 870, 2340, 2582, 3146 |
| BbrPI | CACGTG | 1 cut(s) | 2209 |
| BbsI | GAAGAC | 4 cut(s) | 911, 1877, 4052, 4073 |
| Bbv12I | GWGCWC | 5 cut(s) | 870, 2340, 2582, 3146, 3948 |
| BccI | CCATC | 5 cut(s) | 2045, 2066, 2295, 2546, 2891 |
| BceAI | ACGGC | 4 cut(s) | 262, 2512, 3559, 3566 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 3317, 3351, 3372, 3406 |
| BciT130I | CCWGG | 7 cut(s) | 531, 681, 975, 1406, 2302, 2797, 3415 |
| BciVI | GTATCC | 1 cut(s) | 1477 |
| BclI | TGATCA | 1 cut(s) | 2035 |
| BcnI | CCSGG | 2 cut(s) | 999, 2956 |
| BfmI | CTRYAG | 1 cut(s) | 1719 |
| BfoI | RGCGCY | 2 cut(s) | 2490, 3969 |
| BfrI | CTTAAG | 3 cut(s) | 656, 1438, 1657 |
| BfuAI | ACCTGC | 2 cut(s) | 948, 1383 |
| BfuI | GTATCC | 1 cut(s) | 1477 |
| BglII | AGATCT | 1 cut(s) | 2180 |
| BlnI | CCTAGG | 2 cut(s) | 320, 3215 |
| BmcAI | AGTACT | 1 cut(s) | 371 |
| Bme1390I | CCNGG | 9 cut(s) | 531, 681, 975, 999, 1406, 2302, 2797, 2956, 3415 |
| Bme18I | GGWCC | 4 cut(s) | 278, 745, 2454, 3539 |
| BmeT110I | CYCGRG | 1 cut(s) | 2385 |
| BmgT120I | GGNCC | 5 cut(s) | 278, 745, 1330, 2454, 3539 |
| BmiI | GGNNCC | 6 cut(s) | 280, 1321, 1387, 2862, 3233, 3540 |
| BmrFI | CCNGG | 9 cut(s) | 531, 681, 975, 999, 1406, 2302, 2797, 2956, 3415 |
| BmrI | ACTGGG | 1 cut(s) | 1319 |
| BmuI | ACTGGG | 1 cut(s) | 1319 |
| BoxI | GACNNNNGTC | 2 cut(s) | 276, 3879 |
| BpiI | GAAGAC | 4 cut(s) | 911, 1877, 4052, 4073 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 356, 388, 3143, 3175 |
| BpmI | CTGGAG | 8 cut(s) | 45, 499, 702, 996, 1124, 2553, 2714, 3628 |
| Bpu10I | CCTNAGC | 2 cut(s) | 2433, 3554 |
| BpuEI | CTTGAG | 3 cut(s) | 407, 1548, 2240 |
| BpuMI | CCSGG | 2 cut(s) | 999, 2956 |
| BsaAI | YACGTR | 1 cut(s) | 2209 |
| BsaI | GGTCTC | 2 cut(s) | 337, 602 |
| BsaWI | WCCGGW | 3 cut(s) | 52, 3991, 4049 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 585, 615, 969, 999 |
| Bse118I | RCCGGY | 3 cut(s) | 52, 4032, 4049 |
| Bse1I | ACTGG | 8 cut(s) | 335, 482, 1325, 1420, 1879, 2570, 2770, 3260 |
| Bse3DI | GCAATG | 4 cut(s) | 636, 650, 1053, 2948 |
| BseBI | CCWGG | 7 cut(s) | 531, 681, 975, 1406, 2302, 2797, 3415 |
| BseMI | GCAATG | 4 cut(s) | 636, 650, 1053, 2948 |
| BseMII | CTCAG | 6 cut(s) | 542, 1365, 1480, 2509, 3176, 3885 |
| BseNI | ACTGG | 8 cut(s) | 335, 482, 1325, 1420, 1879, 2570, 2770, 3260 |
| BseRI | GAGGAG | 7 cut(s) | 162, 380, 583, 586, 848, 2075, 2496 |
| BsgI | GTGCAG | 3 cut(s) | 359, 3150, 3741 |
| Bsh1236I | CGCG | 2 cut(s) | 260, 295 |
| Bsh1285I | CGRYCG | 3 cut(s) | 102, 2560, 3880 |
| BshFI | GGCC | 3 cut(s) | 1331, 2055, 3973 |
| BshNI | GGYRCC | 1 cut(s) | 2860 |
| BshTI | ACCGGT | 2 cut(s) | 52, 4049 |
| BsiEI | CGRYCG | 3 cut(s) | 102, 2560, 3880 |
| BsiHKAI | GWGCWC | 5 cut(s) | 870, 2340, 2582, 3146, 3948 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2385 |
| BsiSI | CCGG | 8 cut(s) | 53, 942, 998, 1099, 2955, 3992, 4033, 4050 |
| BslFI | GGGAC | 2 cut(s) | 264, 3552 |
| BsmFI | GGGAC | 2 cut(s) | 264, 3552 |
| BsmI | GAATGC | 1 cut(s) | 3166 |
| BsnI | GGCC | 3 cut(s) | 1331, 2055, 3973 |
| Bso31I | GGTCTC | 2 cut(s) | 337, 602 |
| BsoBI | CYCGRG | 1 cut(s) | 2385 |
| Bsp1286I | GDGCHC | 5 cut(s) | 870, 2340, 2582, 3146, 3948 |
| Bsp1407I | TGTACA | 1 cut(s) | 2511 |
| Bsp19I | CCATGG | 2 cut(s) | 35, 3896 |
| BspANI | GGCC | 3 cut(s) | 1331, 2055, 3973 |
| BspCNI | CTCAG | 6 cut(s) | 543, 1364, 1479, 2508, 3175, 3884 |
| BspFNI | CGCG | 2 cut(s) | 260, 295 |
| BspHI | TCATGA | 1 cut(s) | 663 |
| BspLI | GGNNCC | 6 cut(s) | 280, 1321, 1387, 2862, 3233, 3540 |
| BspMAI | CTGCAG | 1 cut(s) | 1723 |
| BspMI | ACCTGC | 2 cut(s) | 948, 1383 |
| BspQI | GCTCTTC | 2 cut(s) | 858, 2328 |
| BspT107I | GGYRCC | 1 cut(s) | 2860 |
| BspTI | CTTAAG | 3 cut(s) | 656, 1438, 1657 |
| BspTNI | GGTCTC | 2 cut(s) | 337, 602 |
| BsrBI | CCGCTC | 1 cut(s) | 227 |
| BsrDI | GCAATG | 4 cut(s) | 636, 650, 1053, 2948 |
| BsrFI | RCCGGY | 3 cut(s) | 52, 4032, 4049 |
| BsrGI | TGTACA | 1 cut(s) | 2511 |
| BsrI | ACTGG | 8 cut(s) | 335, 482, 1325, 1420, 1879, 2570, 2770, 3260 |
| BssAI | RCCGGY | 3 cut(s) | 52, 4032, 4049 |
| BssNAI | GTATAC | 1 cut(s) | 3114 |
| BssT1I | CCWWGG | 5 cut(s) | 35, 320, 3215, 3227, 3896 |
| Bst1107I | GTATAC | 1 cut(s) | 3114 |
| Bst2UI | CCWGG | 7 cut(s) | 531, 681, 975, 1406, 2302, 2797, 3415 |
| BstAFI | CTTAAG | 3 cut(s) | 656, 1438, 1657 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1610 |
| BstAUI | TGTACA | 1 cut(s) | 2511 |
| BstBAI | YACGTR | 1 cut(s) | 2209 |
| BstC8I | GCNNGC | 7 cut(s) | 299, 1104, 1546, 2226, 2578, 3330, 4034 |
| BstDSI | CCRYGG | 3 cut(s) | 35, 1205, 3896 |
| BstFNI | CGCG | 2 cut(s) | 260, 295 |
| BstH2I | RGCGCY | 2 cut(s) | 2490, 3969 |
| BstHHI | GCGC | 7 cut(s) | 260, 297, 1615, 1915, 2489, 3968, 3986 |
| BstMCI | CGRYCG | 3 cut(s) | 102, 2560, 3880 |
| BstNI | CCWGG | 7 cut(s) | 531, 681, 975, 1406, 2302, 2797, 3415 |
| BstNSI | RCATGY | 5 cut(s) | 529, 740, 1650, 2228, 3129 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 276, 3879 |
| BstSCI | CCNGG | 9 cut(s) | 529, 679, 973, 997, 1404, 2300, 2795, 2954, 3413 |
| BstSFI | CTRYAG | 1 cut(s) | 1719 |
| BstUI | CGCG | 2 cut(s) | 260, 295 |
| BstV2I | GAAGAC | 4 cut(s) | 911, 1877, 4052, 4073 |
| BstX2I | RGATCY | 6 cut(s) | 94, 675, 1319, 1385, 1760, 2180 |
| BstYI | RGATCY | 6 cut(s) | 94, 675, 1319, 1385, 1760, 2180 |
| BstZ17I | GTATAC | 1 cut(s) | 3114 |
| BsuI | GTATCC | 1 cut(s) | 1477 |
| BsuRI | GGCC | 3 cut(s) | 1331, 2055, 3973 |
| BtgI | CCRYGG | 3 cut(s) | 35, 1205, 3896 |
| BtsI | GCAGTG | 1 cut(s) | 164 |
| BtsIMutI | CAGTG | 8 cut(s) | 164, 342, 486, 1332, 1500, 1872, 2452, 2763 |
| BveI | ACCTGC | 2 cut(s) | 948, 1383 |
| Cac8I | GCNNGC | 7 cut(s) | 299, 1104, 1546, 2226, 2578, 3330, 4034 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2999 |
| CciI | TCATGA | 1 cut(s) | 663 |
| CfoI | GCGC | 7 cut(s) | 260, 297, 1615, 1915, 2489, 3968, 3986 |
| Cfr10I | RCCGGY | 3 cut(s) | 52, 4032, 4049 |
| Cfr13I | GGNCC | 5 cut(s) | 278, 745, 1330, 2454, 3539 |
| CseI | GACGC | 1 cut(s) | 320 |
| CsiI | ACCWGGT | 1 cut(s) | 3413 |
| Csp6I | GTAC | 6 cut(s) | 370, 799, 2296, 2512, 3119, 3396 |
| CspAI | ACCGGT | 2 cut(s) | 52, 4049 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 412, 447 |
| CviQI | GTAC | 6 cut(s) | 370, 799, 2296, 2512, 3119, 3396 |
| DraI | TTTAAA | 2 cut(s) | 394, 1479 |
| EaeI | YGGCCR | 1 cut(s) | 2053 |
| EciI | GGCGGA | 1 cut(s) | 2151 |
| Ecl136II | GAGCTC | 4 cut(s) | 868, 2338, 2580, 3144 |
| Eco130I | CCWWGG | 5 cut(s) | 35, 320, 3215, 3227, 3896 |
| Eco147I | AGGCCT | 1 cut(s) | 3973 |
| Eco24I | GRGCYC | 4 cut(s) | 870, 2340, 2582, 3146 |
| Eco31I | GGTCTC | 2 cut(s) | 337, 602 |
| Eco32I | GATATC | 2 cut(s) | 1709, 3202 |
| Eco47I | GGWCC | 4 cut(s) | 278, 745, 2454, 3539 |
| Eco47III | AGCGCT | 1 cut(s) | 2488 |
| Eco53kI | GAGCTC | 4 cut(s) | 868, 2338, 2580, 3144 |
| Eco57I | CTGAAG | 5 cut(s) | 945, 1932, 2334, 3120, 4012 |
| Eco72I | CACGTG | 1 cut(s) | 2209 |
| Eco88I | CYCGRG | 1 cut(s) | 2385 |
| EcoICRI | GAGCTC | 4 cut(s) | 868, 2338, 2580, 3144 |
| EcoO109I | RGGNCCY | 1 cut(s) | 3539 |
| EcoRI | GAATTC | 2 cut(s) | 2369, 3367 |
| EcoRII | CCWGG | 7 cut(s) | 529, 679, 973, 1404, 2300, 2795, 3413 |
| EcoRV | GATATC | 2 cut(s) | 1709, 3202 |
| EcoT14I | CCWWGG | 5 cut(s) | 35, 320, 3215, 3227, 3896 |
| EcoT38I | GRGCYC | 4 cut(s) | 870, 2340, 2582, 3146 |
| ErhI | CCWWGG | 5 cut(s) | 35, 320, 3215, 3227, 3896 |
| FaqI | GGGAC | 2 cut(s) | 264, 3552 |
| FauNDI | CATATG | 4 cut(s) | 777, 1954, 3268, 3800 |
| FbaI | TGATCA | 1 cut(s) | 2035 |
| FblI | GTMKAC | 1 cut(s) | 3113 |
| FriOI | GRGCYC | 4 cut(s) | 870, 2340, 2582, 3146 |
| GlaI | GCGC | 7 cut(s) | 259, 296, 1614, 1914, 2488, 3967, 3985 |
| GsuI | CTGGAG | 8 cut(s) | 45, 499, 702, 996, 1124, 2553, 2714, 3628 |
| HaeII | RGCGCY | 2 cut(s) | 2490, 3969 |
| HaeIII | GGCC | 3 cut(s) | 1331, 2055, 3973 |
| HapII | CCGG | 8 cut(s) | 53, 942, 998, 1099, 2955, 3992, 4033, 4050 |
| HgaI | GACGC | 1 cut(s) | 320 |
| HhaI | GCGC | 7 cut(s) | 260, 297, 1615, 1915, 2489, 3968, 3986 |
| Hin6I | GCGC | 7 cut(s) | 258, 295, 1613, 1913, 2487, 3966, 3984 |
| HinP1I | GCGC | 7 cut(s) | 258, 295, 1613, 1913, 2487, 3966, 3984 |
| HincII | GTYRAC | 3 cut(s) | 446, 2473, 3420 |
| HindII | GTYRAC | 3 cut(s) | 446, 2473, 3420 |
| HindIII | AAGCTT | 3 cut(s) | 129, 1660, 2873 |
| HpaI | GTTAAC | 1 cut(s) | 2473 |
| HpaII | CCGG | 8 cut(s) | 53, 942, 998, 1099, 2955, 3992, 4033, 4050 |
| Hpy166II | GTNNAC | 7 cut(s) | 446, 2473, 3098, 3114, 3420, 3868, 3958 |
| Hpy8I | GTNNAC | 7 cut(s) | 446, 2473, 3098, 3114, 3420, 3868, 3958 |
| Hpy99I | CGWCG | 1 cut(s) | 3580 |
| HpyCH4IV | ACGT | 3 cut(s) | 2030, 2208, 3917 |
| HpySE526I | ACGT | 3 cut(s) | 2030, 2208, 3917 |
| HspAI | GCGC | 7 cut(s) | 258, 295, 1613, 1913, 2487, 3966, 3984 |
| KroI | GCCGGC | 1 cut(s) | 4032 |
| KroNI | GCCGGC | 1 cut(s) | 4034 |
| Ksp22I | TGATCA | 1 cut(s) | 2035 |
| KspAI | GTTAAC | 1 cut(s) | 2473 |
| LguI | GCTCTTC | 2 cut(s) | 858, 2328 |
| LmnI | GCTCC | 5 cut(s) | 64, 1001, 1527, 2695, 3231 |
| MabI | ACCWGGT | 1 cut(s) | 3413 |
| MaeII | ACGT | 3 cut(s) | 2030, 2208, 3917 |
| MbiI | CCGCTC | 1 cut(s) | 227 |
| MflI | RGATCY | 6 cut(s) | 94, 675, 1319, 1385, 1760, 2180 |
| MhlI | GDGCHC | 5 cut(s) | 870, 2340, 2582, 3146, 3948 |
| MlsI | TGGCCA | 1 cut(s) | 2055 |
| MluNI | TGGCCA | 1 cut(s) | 2055 |
| MlyI | GAGTC | 9 cut(s) | 28, 451, 562, 587, 1662, 1955, 2978, 3080, 3281 |
| MmeI | TCCRAC | 2 cut(s) | 2397, 2620 |
| Mox20I | TGGCCA | 1 cut(s) | 2055 |
| MroNI | GCCGGC | 1 cut(s) | 4032 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2403 |
| MscI | TGGCCA | 1 cut(s) | 2055 |
| MslI | CAYNNNNRTG | 5 cut(s) | 780, 1516, 3186, 3730, 3861 |
| Msp20I | TGGCCA | 1 cut(s) | 2055 |
| MspA1I | CMGCKG | 3 cut(s) | 1607, 1700, 1751 |
| MspCI | CTTAAG | 3 cut(s) | 656, 1438, 1657 |
| MspI | CCGG | 8 cut(s) | 53, 942, 998, 1099, 2955, 3992, 4033, 4050 |
| MspR9I | CCNGG | 9 cut(s) | 531, 681, 975, 999, 1406, 2302, 2797, 2956, 3415 |
| Mva1269I | GAATGC | 1 cut(s) | 3166 |
| MvaI | CCWGG | 7 cut(s) | 531, 681, 975, 1406, 2302, 2797, 3415 |
| MvnI | CGCG | 2 cut(s) | 260, 295 |
| NaeI | GCCGGC | 1 cut(s) | 4034 |
| NciI | CCSGG | 2 cut(s) | 999, 2956 |
| NcoI | CCATGG | 2 cut(s) | 35, 3896 |
| NdeI | CATATG | 4 cut(s) | 777, 1954, 3268, 3800 |
| NgoMIV | GCCGGC | 1 cut(s) | 4032 |
| NlaIV | GGNNCC | 6 cut(s) | 280, 1321, 1387, 2862, 3233, 3540 |
| NmeAIII | GCCGAG | 1 cut(s) | 515 |
| NmuCI | GTSAC | 5 cut(s) | 242, 880, 988, 2380, 2667 |
| NspI | RCATGY | 5 cut(s) | 529, 740, 1650, 2228, 3129 |
| OliI | CACNNNNGTG | 1 cut(s) | 3861 |
| PaeI | GCATGC | 1 cut(s) | 2228 |
| PagI | TCATGA | 1 cut(s) | 663 |
| PceI | AGGCCT | 1 cut(s) | 3973 |
| PciI | ACATGT | 1 cut(s) | 1646 |
| PciSI | GCTCTTC | 2 cut(s) | 858, 2328 |
| PctI | GAATGC | 1 cut(s) | 3166 |
| PdiI | GCCGGC | 1 cut(s) | 4034 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2403 |
| PfoI | TCCNGGA | 3 cut(s) | 973, 997, 2954 |
| PinAI | ACCGGT | 2 cut(s) | 52, 4049 |
| Ple19I | CGATCG | 1 cut(s) | 102 |
| PleI | GAGTC | 9 cut(s) | 27, 450, 561, 586, 1661, 1955, 2977, 3079, 3280 |
| PmaCI | CACGTG | 1 cut(s) | 2209 |
| PmlI | CACGTG | 1 cut(s) | 2209 |
| PpsI | GAGTC | 9 cut(s) | 27, 450, 561, 586, 1661, 1955, 2977, 3079, 3280 |
| Ppu21I | YACGTR | 1 cut(s) | 2209 |
| PpuMI | RGGWCCY | 1 cut(s) | 3539 |
| PscI | ACATGT | 1 cut(s) | 1646 |
| PshAI | GACNNNNGTC | 2 cut(s) | 276, 3879 |
| PsiI | TTATAA | 2 cut(s) | 2934, 3060 |
| Psp124BI | GAGCTC | 4 cut(s) | 870, 2340, 2582, 3146 |
| Psp5II | RGGWCCY | 1 cut(s) | 3539 |
| Psp6I | CCWGG | 7 cut(s) | 529, 679, 973, 1404, 2300, 2795, 3413 |
| PspCI | CACGTG | 1 cut(s) | 2209 |
| PspGI | CCWGG | 7 cut(s) | 529, 679, 973, 1404, 2300, 2795, 3413 |
| PspN4I | GGNNCC | 6 cut(s) | 280, 1321, 1387, 2862, 3233, 3540 |
| PspPI | GGNCC | 5 cut(s) | 278, 745, 1330, 2454, 3539 |
| PspPPI | RGGWCCY | 1 cut(s) | 3539 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1665, 1697 |
| PstI | CTGCAG | 1 cut(s) | 1723 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2999 |
| PsuI | RGATCY | 6 cut(s) | 94, 675, 1319, 1385, 1760, 2180 |
| PvuI | CGATCG | 1 cut(s) | 102 |
| PvuII | CAGCTG | 3 cut(s) | 1607, 1700, 1751 |
| RsaI | GTAC | 6 cut(s) | 371, 800, 2297, 2513, 3120, 3397 |
| RsaNI | GTAC | 6 cut(s) | 370, 799, 2296, 2512, 3119, 3396 |
| RseI | CAYNNNNRTG | 5 cut(s) | 780, 1516, 3186, 3730, 3861 |
| SacI | GAGCTC | 4 cut(s) | 870, 2340, 2582, 3146 |
| SapI | GCTCTTC | 2 cut(s) | 858, 2328 |
| Sau96I | GGNCC | 5 cut(s) | 278, 745, 1330, 2454, 3539 |
| ScaI | AGTACT | 1 cut(s) | 371 |
| SchI | GAGTC | 9 cut(s) | 28, 451, 562, 587, 1662, 1955, 2978, 3080, 3281 |
| ScrFI | CCNGG | 9 cut(s) | 531, 681, 975, 999, 1406, 2302, 2797, 2956, 3415 |
| SduI | GDGCHC | 5 cut(s) | 870, 2340, 2582, 3146, 3948 |
| SexAI | ACCWGGT | 1 cut(s) | 3413 |
| SfcI | CTRYAG | 1 cut(s) | 1719 |
| SinI | GGWCC | 4 cut(s) | 278, 745, 2454, 3539 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 780, 1516, 3186, 3730, 3861 |
| SmlI | CTYRAG | 6 cut(s) | 422, 656, 1438, 1563, 1657, 2219 |
| SmoI | CTYRAG | 6 cut(s) | 422, 656, 1438, 1563, 1657, 2219 |
| SphI | GCATGC | 1 cut(s) | 2228 |
| SseBI | AGGCCT | 1 cut(s) | 3973 |
| SstI | GAGCTC | 4 cut(s) | 870, 2340, 2582, 3146 |
| StuI | AGGCCT | 1 cut(s) | 3973 |
| StyD4I | CCNGG | 9 cut(s) | 529, 679, 973, 997, 1404, 2300, 2795, 2954, 3413 |
| StyI | CCWWGG | 5 cut(s) | 35, 320, 3215, 3227, 3896 |
| TaiI | ACGT | 3 cut(s) | 2033, 2211, 3920 |
| TaqI | TCGA | 9 cut(s) | 191, 387, 2588, 2740, 2804, 3204, 3337, 3461, 3578 |
| TaqII | GACCGA | 1 cut(s) | 2546 |
| TatI | WGTACW | 3 cut(s) | 369, 2511, 3395 |
| TauI | GCSGC | 4 cut(s) | 221, 230, 233, 252 |
| TscAI | CASTG | 8 cut(s) | 171, 342, 493, 1332, 1500, 1872, 2452, 2770 |
| TseFI | GTSAC | 5 cut(s) | 242, 880, 988, 2380, 2667 |
| Tsp45I | GTSAC | 5 cut(s) | 242, 880, 988, 2380, 2667 |
| TspGWI | ACGGA | 2 cut(s) | 1222, 1565 |
| TspRI | CASTG | 8 cut(s) | 171, 342, 493, 1332, 1500, 1872, 2452, 2770 |
| Vha464I | CTTAAG | 3 cut(s) | 656, 1438, 1657 |
| VpaK11BI | GGWCC | 4 cut(s) | 278, 745, 2454, 3539 |
| XapI | RAATTY | 6 cut(s) | 153, 1505, 2369, 3065, 3367, 3491 |
| XbaI | TCTAGA | 5 cut(s) | 134, 635, 1175, 1214, 3935 |
| XceI | RCATGY | 5 cut(s) | 529, 740, 1650, 2228, 3129 |
| XmaJI | CCTAGG | 2 cut(s) | 320, 3215 |
| XmiI | GTMKAC | 1 cut(s) | 3113 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2403 |
| ZrmI | AGTACT | 1 cut(s) | 371 |