Rh7DG121400

lysine-specific demethylase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Reverse (-)
10310574 .. 10317972
7399 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG121400.1

Sequence Viewer

Length: 4479 bp
ATGGCAGCTTCGGAGCAGCCCCAGGAAGTTCTGTCATGGCTCAGAGCCCTCCCCGTAGCTCCGGAGTACCACCCTACTTGGGCCGAGTTCCAAGATCCGATTGCCTACATTTTCAAGATCGAGAAGGAGGCTTCCAAGTATGGAATCTGCAAAATCGTGCCGCCGGTGCCGCCGGCGCCGAAGAAAACAGCAATTGCTAATCTCAACAAGTCTCTGGTGGCGCGCGGTGGGCCTTCGGTTGGAAAAGGCCCCAAGGCCCTGCCCACATTCACTACCCGGCAGCAGCAGATCGGGTTCTGCCCCCGGAAGGCCCGCCCGGTGCAGAGACCCGTCTGGCAGAGCGGCGAGCACTACACATTCAACCAATTCGAGGCCAAAGCCAAGAGCTTTGAGAAGAGCTACTTGAAGAAGCGGAGGAAGAAGGGAGGCCTGAACCCTCTGGATGTCGAGACCCTTTACTGGAGAGCCACTGTGGACAAGCCCTTCTCCGTCGAGTACGCCAATGACATGCCCGGCTCGGCTTTCGTGCCGCTCAGCAGCAAGAAGAGTGGCGCCAGCACTAGCAGGGAGGCAGGGGACGGCGTCACGCTGGGAGAGACGGCCTGGAATATGAGGGGGGTTTCCAGGTCCAGAGGGTCTCTGCTGAGGTTTATGAAGGAGGAGATTCCCGGGGTTACGTGTCCAATGGTCTATGTCGCCATGATGTTCAGCTGGTTTGCTTGGCACGTCGAGGATCATGACTTGCATAGCTTGAATTACCTGCATTTGGGAGCCGGCAAGACTTGGTATGGCGTCCCCAGGGAGGCTGCCGTGGCCTTCGAGGAGGTCGTCAGAGTTCAGGGTTATGGAGGAGAGATCAATCCTCTTGTTACATTTGCGACGCTTGGTGAGAAGACCACCGTGATGTCACCTGAAGTCTTTATTAGTTCAGGGATTCCATGCTGCAGGTTAGTGCAAAATGCTGGGGAATTTGTTGTCACTTTTCCAAGAGCCTATCACACTGGATTCAGTCACGGATTTAATTGTGGGGAGGCAGCCAACATTGCAACTCCTGAGTGGTTGAGGGTTGCCAATGATGCGGCTGTCCGACGAGCTTCAATCAATTATCCTCCTATGGTGTCTCATTTTCAGTTACTTTATGATCTTGCTCTAGCATTATGTTCAAGAACGCCTGTGCGCAATAGTGCTGAACCTCGAAGTTCTCGACTAAAAGATAAGAAAAAGGGTGAAGGAGAAACAGTAGTTAAAGGTTTATTTGTGAAGAATGTCATTCAGAACAATGAGCTGCTTCATGTTCTTGGAAAAGGGTCGTCAATTGTACTTCTACCACAGAGTTCTTCGGACATTTCTGTTTGTTCAAAATTACGTGTTGGTTCACAGTTAAGAGTAAACCCTGATGATCTCATGATAGACGGGAAGCAGGGAATCAAGCAGGTAAAAGGGTTGTATTCAGTGAAAGGAAAACTTGCATCTTTATGTGAAAGTAGCCAGCATCCCTCATTAAATGCAAATGGCAATGCAAGTACTCCTTCTAAGATGCTGAACATGAGCACTAAAAGAGAAAGTAATGTTGAAGGCGAAGGGTTGTCAGATCAGAGACTATTTTCTTGTGTTACATGTGGAATTTTGAGCTTTTCATGTGTTGCTATAATTCAACCAAGAGAAGCAGCAGCCAGATATCTCATGTCAGCAGATTGTAGTTTTTTCAACGATTGGGCTGTTGATTGTGAGCCTATCCAGGTTGCAAATGGAGATCCAAATAGTTCAAAGAAGGGTCCCTGTACAGAAACAGGATTGATGCAAAAGAGTACCCATGATGGTTTATACGATGTGCCCGTTCAGTCTGCTGATTATCGAAATCAGATCACAGATCCAATCAATGAAGTTGATTCAAATACTGAAATGCAGAGAGATACTAATGCACTTGGGCTATTAGCTTTGACCTATGGAGATTCATCTGACTCGGAGGAAGATCAGGCTGAACCAGATGCTCCTGTTTGTGGTGACGAAACAAACTTGTCAGACTGTTCTTTGGAAGGTAGATATGAGTATAAAAGTGCTAGTCCTCCTTTGAGAGACTCTTATGGAGGTACAGCCGGGGTTCGCAGTCCAACTTCACCACGATTTGATTGTGGTAATGAACTCCCGACTGTTGACAGCAATGTGGAAAATAGACGTGAAGCAACTAATTTCAAGGATAATGGTCATCAATATATTGACTATTCTGTTGATCTTGACACTTTGACAAAGACAAATGGTTTGGGGGGTACATCTATAGATCCAGTAAAGGTTTCATATTCTGGCTCCCCAGATGCGTTAGACATTCAACCAACACGATTTGGTCAGGCCACTTTACAGAAAGAGAGTACAGGCACATCATTTTTTCCAGGATGTGACCAGGATTCTTCTAGAATGCATGTGTTCTGCCTTGAGCATGCTGTAGAGGTTGAGCAGCAGCTCCGTTCATTTGGAGGTGCCCATATTTTACTCCTTTGTCATCCAGACTATCCGCGGATAGTGGATGAAGCAAAAGAAATAGCAGAAGAACTGGGAGTAAATTATCCCTGGAATGATATGGTATTCAGGGATGCCACCAGGGAGGATGAGGAGAGGATTCAGTCAGCTCTGGATAGTGAGGAAGCCATTGCTGGGAATGGAGACTGGGCTGTAAAGATGGGGATCAATCTCTTCTACAGTGCCAGTCTTAGCCGCTCTCATCTTTATAGTAAGCAGATGCCATACAATTCTGTTATATACAATGCATTTGGTCGTAGTTCTCCAGCTAGCTCGCCTGCAGGACCTGAGGTCTGTGGGAGGAGGCCTGCCAAACAGAAAAAGATAGTGGTAGGGAAATGGTGCGGTAAAGTTTGGATGTCAAATCAAGTTCATCCCTTCTTAATAAAAAGGGATCATGAAGAGAAAAAAGTAGAGCTAGAACAGAGGAGGTTCCATGATTCAGAAATGCCAGATGAGAAGCTTGATGGAAAATCAGAAAGCACACGCAAAACTGAGAAAACTATGGTGACTAAACAGTATTCTAGGAAGAGGAAAATGACTGTAGAGGGTGGGACAACCAAGAAAGCAAAATGTCCTGATGCAGTTTCTGCTCATTCAGTAGATGATAACTCCCAGCAGCAGCAGAAGAGGTTTCTCAAGAACAAGCAAGCCAAATATATAGAGAGTGGTCCAACCAAGAAAGCAAAGTTTACTGAGACGGAAGATGCAGTGTCAGGTGATTCAATGGAAGATGATTTCCGTCAGCAAAATAGGAGGACTCTTCGAAGCGAGCAAGCCAAGTATATGGGAGATGATGATGTTTCAGATGATTCAATGGGAGTTGATTCTCACCAGCAGCAGAGGCGGATTGCTAAAAGTAAGCAAGCGAAGTATATTGCCAGAGATTTCTCTATGTTGTCAGATGATTCAGTTGGAGTTAATTCTGATCATCAGCAGAGGCGGGTTGCTGAAAGTAATGCCAGGGAGTTCTCTGCGGTTTCAGATGATTCGCTTGAGGATAATATCCATCAGCTGCATAGGAGGTCACTTAGACGCAACAAAGGTAAATGCATTGGGAGAGGAAATTTGACTTCACAAAATCTTCACGGGGTCAGTTCTCCTCAGCAACAAAGGAGGACTTCTAAAAGCAAGCAGGCCAAAACTGTGGAGAGAGAAGATGCAGCTCTGGATGACACACCGGACGATAATGCTGCACTGCAGCTTAAGAGTTTCCGAGGCAGGCAAATAAAACCAGAGACCGTTCAGCAAAAGAAACAGGAAACTCCTCGCCGTGTGAAGCAAGGCTCCCGCCGTCTTCAAGAAACCCAGCAAAAGACTCCCAGGATCCAAAATATTCAATCTGAACAAAACACCGTTGATGTAAATGCTGAGGAACCAGAAGGTGGGCCTAGCACGCGACTTAGAAAAAGACCTCCAAAAGAGCAGCCAGAAACCGGTAGGAAAAAGGCAAAAGAGCAGCCAGAAACTGGAAGGAAAAAGGCAAGAGAGCAGCAACAAACTGGTAGGATAAAGGTAAACACTGCTTTAGGTGTGAAGACAAAGAATGCTTCAGCTCGGAAGGGAAAGAATGCTTCAGCAGTGAGGGAAGAGGAAGCAGAATTCTTGTGTGACGTTGAGGGGTGCACCATGAGTTTTGGCACGAAACAAGAGCTAAATCTCCACAAGAAAAACGTGTGTCCGGTCAAGGGTTGTGGAAAGAAATTCTTCTCGCACAAGTATCTGGTGCAACATCGTCGAGTTCATGAGGATGACCGCCCCCTTCGGTGCCCTTGGAAGGGATGCAAGATGACATTCAAGTGGGCATGGGCTCGGACTGAGCACATTAGGGTACACACAGGTGCCCGTCCGTACGTCTGTGCAGAGCCAGGGTGTGGGCAGACCTTCCGGTTTGTGTCAGATTTCAGCCGTCATAAGCGGAAGACTGGGCATTCAGTAAAGAAAGGTAAGGGGCGATCGCGATGA

Protein Analysis

1492

Amino Acids

166.38

Weight (kDa)

9.05

Isoelectric Point (pI)

51.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
JmjN PF02375 21 - 54 1.9e-15 jmjN domain
JmjC PF02373 230 - 347 1.2e-34 JmjC domain, hydroxylase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1178
Acc36I ACCTGC 3 cut(s) 768, 936, 1423
AccB1I GGYRCC 6 cut(s) 166, 175, 551, 2474, 4281, 4355
AccB7I CCANNNNNTGG 3 cut(s) 3899, 3983, 4388
AccBSI CCGCTC 3 cut(s) 342, 532, 2712
AccII CGCG 5 cut(s) 223, 225, 2512, 3913, 4474
AccIII TCCGGA 1 cut(s) 61
AclWI GGATC 9 cut(s) 89, 741, 1748, 1865, 2273, 2687, 2916, 3835, 3848
AcsI RAATTY 5 cut(s) 968, 1623, 3580, 4115, 4217
AcuI CTGAAG 3 cut(s) 933, 4050, 4074
AcyI GRCGYC 4 cut(s) 176, 552, 582, 792
AflII CTTAAG 1 cut(s) 3719
AflIII ACRYGT 4 cut(s) 677, 1366, 1616, 4188
AgeI ACCGGT 1 cut(s) 3950
AhdI GACNNNNNGTC 1 cut(s) 2804
AjiI CACGTC 2 cut(s) 727, 2177
AleI CACNNNNGTG 1 cut(s) 4353
Alw21I GWGCWC 4 cut(s) 351, 1553, 4142, 4338
Alw44I GTGCAC 1 cut(s) 4138
AlwI GGATC 9 cut(s) 89, 741, 1748, 1865, 2273, 2687, 2916, 3835, 3848
AlwNI CAGNNNCTG 3 cut(s) 2801, 3104, 3983
Ama87I CYCGRG 1 cut(s) 668
Aor13HI TCCGGA 1 cut(s) 61
ApaLI GTGCAC 1 cut(s) 4138
ApoI RAATTY 5 cut(s) 968, 1623, 3580, 4115, 4217
ArsI GACNNNNNNTTYG 2 cut(s) 2242, 2274
AsiGI ACCGGT 1 cut(s) 3950
AsiSI GCGATCGC 1 cut(s) 4472
Asp700I GAANNNNTTC 1 cut(s) 4220
AspLEI GCGC 5 cut(s) 178, 223, 225, 554, 1179
AsuC2I CCSGG 7 cut(s) 277, 304, 317, 513, 669, 670, 2098
AsuHPI GGTGA 8 cut(s) 899, 900, 1238, 2015, 2109, 3034, 3245, 3338
AsuII TTCGAA 1 cut(s) 3280
AsuNHI GCTAGC 1 cut(s) 2783
AvaI CYCGRG 1 cut(s) 668
AvaII GGWCC 4 cut(s) 627, 1775, 2798, 3185
AxyI CCTNAGG 1 cut(s) 2802
BaeGI GKGCMC 5 cut(s) 1836, 2479, 4142, 4286, 4360
BamHI GGATCC 1 cut(s) 3840
BanI GGYRCC 6 cut(s) 166, 175, 551, 2474, 4281, 4355
BanII GRGCYC 2 cut(s) 49, 4327
BbsI GAAGAC 4 cut(s) 899, 3803, 4058, 4442
Bbv12I GWGCWC 4 cut(s) 351, 1553, 4142, 4338
BbvCI CCTCAGC 3 cut(s) 644, 3618, 3885
BccI CCATC 4 cut(s) 1811, 2668, 2975, 3531
BceAI ACGGC 6 cut(s) 595, 615, 794, 3771, 3792, 4407
BcgI CGANNNNNNTGC 4 cut(s) 3689, 3723, 4232, 4266
BclI TGATCA 1 cut(s) 3442
BcnI CCSGG 7 cut(s) 277, 304, 317, 513, 669, 670, 2098
BfaI CTAG 8 cut(s) 561, 1151, 2061, 2409, 2784, 2933, 3039, 3906
BfmI CTRYAG 7 cut(s) 943, 2274, 2439, 2692, 2793, 3057, 3713
BfoI RGCGCY 2 cut(s) 179, 555
BfrI CTTAAG 1 cut(s) 3719
BfuAI ACCTGC 3 cut(s) 768, 936, 1423
BlpI GCTNAGC 1 cut(s) 533
BmcAI AGTACT 1 cut(s) 1525
Bme18I GGWCC 4 cut(s) 627, 1775, 2798, 3185
BmeRI GACNNNNNGTC 1 cut(s) 2804
BmeT110I CYCGRG 1 cut(s) 668
BmgBI CACGTC 2 cut(s) 727, 2177
BmrI ACTGGG 3 cut(s) 2558, 2671, 4449
BmtI GCTAGC 1 cut(s) 2787
BmuI ACTGGG 3 cut(s) 2558, 2671, 4449
BpiI GAAGAC 4 cut(s) 899, 3803, 4058, 4442
BpmI CTGGAG 2 cut(s) 481, 2763
Bpu10I CCTNAGC 3 cut(s) 644, 3618, 3885
Bpu1102I GCTNAGC 1 cut(s) 533
Bpu14I TTCGAA 1 cut(s) 3280
BpuEI CTTGAG 3 cut(s) 2450, 3137, 3530
BpuMI CCSGG 7 cut(s) 277, 304, 317, 513, 669, 670, 2098
BsaAI YACGTR 2 cut(s) 678, 1367
BsaBI GATNNNNATC 1 cut(s) 2678
BsaHI GRCGYC 4 cut(s) 176, 552, 582, 792
BsaI GGTCTC 4 cut(s) 319, 443, 642, 3746
BsaWI WCCGGW 5 cut(s) 61, 3694, 3950, 4195, 4401
BsaXI ACNNNNNCTCC 2 cut(s) 1224, 1254
Bse118I RCCGGY 4 cut(s) 163, 172, 773, 3950
Bse1I ACTGG 9 cut(s) 464, 1006, 2282, 2553, 2666, 2700, 3988, 4021, 4444
Bse21I CCTNAGG 1 cut(s) 2802
Bse3DI GCAATG 4 cut(s) 1041, 1522, 2167, 2643
Bse8I GATNNNNATC 1 cut(s) 2678
BseAI TCCGGA 1 cut(s) 61
BseJI GATNNNNATC 1 cut(s) 2678
BseMI GCAATG 4 cut(s) 1041, 1522, 2167, 2643
BseNI ACTGG 9 cut(s) 464, 1006, 2282, 2553, 2666, 2700, 3988, 4021, 4444
BsePI GCGCGC 1 cut(s) 221
BseRI GAGGAG 8 cut(s) 674, 836, 864, 2621, 2830, 2956, 3606, 3771
BseSI GKGCMC 5 cut(s) 1836, 2479, 4142, 4286, 4360
BseYI CCCAGC 5 cut(s) 589, 962, 2648, 3129, 3822
BsgI GTGCAG 3 cut(s) 341, 3693, 4395
Bsh1236I CGCG 5 cut(s) 223, 225, 2512, 3913, 4474
Bsh1285I CGRYCG 1 cut(s) 4472
BshNI GGYRCC 6 cut(s) 166, 175, 551, 2474, 4281, 4355
BshTI ACCGGT 1 cut(s) 3950
BsiEI CGRYCG 1 cut(s) 4472
BsiHKAI GWGCWC 4 cut(s) 351, 1553, 4142, 4338
BsiHKCI CYCGRG 1 cut(s) 668
BsiWI CGTACG 1 cut(s) 4365
BslFI GGGAC 4 cut(s) 590, 779, 1761, 3082
BsmBI CGTCTC 2 cut(s) 590, 3206
BsmFI GGGAC 4 cut(s) 590, 779, 1761, 3082
BsmI GAATGC 4 cut(s) 2418, 4066, 4090, 4444
Bso31I GGTCTC 4 cut(s) 319, 443, 642, 3746
BsoBI CYCGRG 1 cut(s) 668
Bsp119I TTCGAA 1 cut(s) 3280
Bsp13I TCCGGA 1 cut(s) 61
Bsp1407I TGTACA 1 cut(s) 1781
Bsp1720I GCTNAGC 1 cut(s) 533
Bsp68I TCGCGA 1 cut(s) 4474
BspEI TCCGGA 1 cut(s) 61
BspFNI CGCG 5 cut(s) 223, 225, 2512, 3913, 4474
BspHI TCATGA 4 cut(s) 736, 1404, 2911, 4258
BspMAI CTGCAG 3 cut(s) 947, 2797, 3717
BspMI ACCTGC 3 cut(s) 768, 936, 1423
BspOI GCTAGC 1 cut(s) 2787
BspPI GGATC 9 cut(s) 89, 741, 1748, 1865, 2273, 2687, 2916, 3835, 3848
BspQI GCTCTTC 1 cut(s) 389
BspT104I TTCGAA 1 cut(s) 3280
BspT107I GGYRCC 6 cut(s) 166, 175, 551, 2474, 4281, 4355
BspTI CTTAAG 1 cut(s) 3719
BspTNI GGTCTC 4 cut(s) 319, 443, 642, 3746
BsrBI CCGCTC 3 cut(s) 342, 532, 2712
BsrDI GCAATG 4 cut(s) 1041, 1522, 2167, 2643
BsrFI RCCGGY 4 cut(s) 163, 172, 773, 3950
BsrGI TGTACA 1 cut(s) 1781
BsrI ACTGG 9 cut(s) 464, 1006, 2282, 2553, 2666, 2700, 3988, 4021, 4444
BssAI RCCGGY 4 cut(s) 163, 172, 773, 3950
BssHII GCGCGC 1 cut(s) 221
BssNI GRCGYC 4 cut(s) 176, 552, 582, 792
BssT1I CCWWGG 2 cut(s) 252, 4286
Bst6I CTCTTC 8 cut(s) 389, 539, 2693, 2910, 3038, 3137, 3282, 4098
BstACI GRCGYC 4 cut(s) 176, 552, 582, 792
BstAFI CTTAAG 1 cut(s) 3719
BstAPI GCANNNNNTGC 1 cut(s) 3104
BstAUI TGTACA 1 cut(s) 1781
BstBAI YACGTR 2 cut(s) 678, 1367
BstBI TTCGAA 1 cut(s) 3280
BstDSI CCRYGG 2 cut(s) 810, 2510
BstFNI CGCG 5 cut(s) 223, 225, 2512, 3913, 4474
BstH2I RGCGCY 2 cut(s) 179, 555
BstHHI GCGC 5 cut(s) 178, 223, 225, 554, 1179
BstMCI CGRYCG 1 cut(s) 4472
BstNSI RCATGY 4 cut(s) 511, 1620, 2420, 2438
BstSFI CTRYAG 7 cut(s) 943, 2274, 2439, 2692, 2793, 3057, 3713
BstSLI GKGCMC 5 cut(s) 1836, 2479, 4142, 4286, 4360
BstUI CGCG 5 cut(s) 223, 225, 2512, 3913, 4474
BstV2I GAAGAC 4 cut(s) 899, 3803, 4058, 4442
BstX2I RGATCY 5 cut(s) 94, 1753, 1870, 2278, 3840
BstXI CCANNNNNNTGG 2 cut(s) 3301, 3661
BstYI RGATCY 5 cut(s) 94, 1753, 1870, 2278, 3840
Bsu36I CCTNAGG 1 cut(s) 2802
BtgI CCRYGG 2 cut(s) 810, 2510
BtrI CACGTC 2 cut(s) 727, 2177
BtsI GCAGTG 4 cut(s) 3231, 3710, 4035, 4101
BtsIMutI CAGTG 8 cut(s) 468, 999, 1458, 2701, 3231, 3710, 4035, 4101
BtuMI TCGCGA 1 cut(s) 4474
BveI ACCTGC 3 cut(s) 768, 936, 1423
CaiI CAGNNNCTG 3 cut(s) 2801, 3104, 3983
CciI TCATGA 4 cut(s) 736, 1404, 2911, 4258
CfoI GCGC 5 cut(s) 178, 223, 225, 554, 1179
Cfr10I RCCGGY 4 cut(s) 163, 172, 773, 3950
Cfr42I CCGCGG 1 cut(s) 2513
Cfr9I CCCGGG 1 cut(s) 668
CseI GACGC 4 cut(s) 571, 781, 889, 3558
CspAI ACCGGT 1 cut(s) 3950
CspCI CAANNNNNGTGG 6 cut(s) 59, 94, 529, 564, 4189, 4224
DinI GGCGCC 2 cut(s) 177, 553
DriI GACNNNNNGTC 1 cut(s) 2804
Eam1104I CTCTTC 8 cut(s) 389, 539, 2693, 2910, 3038, 3137, 3282, 4098
Eam1105I GACNNNNNGTC 1 cut(s) 2804
EarI CTCTTC 8 cut(s) 389, 539, 2693, 2910, 3038, 3137, 3282, 4098
EciI GGCGGA 1 cut(s) 3376
Eco130I CCWWGG 2 cut(s) 252, 4286
Eco147I AGGCCT 2 cut(s) 429, 2821
Eco24I GRGCYC 2 cut(s) 49, 4327
Eco31I GGTCTC 4 cut(s) 319, 443, 642, 3746
Eco32I GATATC 1 cut(s) 1679
Eco47I GGWCC 4 cut(s) 627, 1775, 2798, 3185
Eco57I CTGAAG 3 cut(s) 933, 4050, 4074
Eco81I CCTNAGG 1 cut(s) 2802
Eco88I CYCGRG 1 cut(s) 668
EcoO109I RGGNCCY 4 cut(s) 248, 256, 1775, 2798
EcoRI GAATTC 1 cut(s) 4115
EcoRV GATATC 1 cut(s) 1679
EcoT14I CCWWGG 2 cut(s) 252, 4286
EcoT22I ATGCAT 3 cut(s) 2418, 2764, 3569
EcoT38I GRGCYC 2 cut(s) 49, 4327
EgeI GGCGCC 2 cut(s) 177, 553
EheI GGCGCC 2 cut(s) 177, 553
ErhI CCWWGG 2 cut(s) 252, 4286
Esp3I CGTCTC 2 cut(s) 590, 3206
FaqI GGGAC 4 cut(s) 590, 779, 1761, 3082
FauI CCCGC 3 cut(s) 320, 3450, 3812
FbaI TGATCA 1 cut(s) 3442
FriOI GRGCYC 2 cut(s) 49, 4327
FspBI CTAG 8 cut(s) 561, 1151, 2061, 2409, 2784, 2933, 3039, 3906
FspI TGCGCA 1 cut(s) 1178
GlaI GCGC 5 cut(s) 177, 222, 224, 553, 1178
GsaI CCCAGC 5 cut(s) 593, 966, 2652, 3133, 3826
GsuI CTGGAG 2 cut(s) 481, 2763
HaeII RGCGCY 2 cut(s) 179, 555
HgaI GACGC 4 cut(s) 571, 781, 889, 3558
HhaI GCGC 5 cut(s) 178, 223, 225, 554, 1179
Hin1I GRCGYC 4 cut(s) 176, 552, 582, 792
Hin6I GCGC 5 cut(s) 176, 221, 223, 552, 1177
HinP1I GCGC 5 cut(s) 176, 221, 223, 552, 1177
HincII GTYRAC 1 cut(s) 2155
HindII GTYRAC 1 cut(s) 2155
HindIII AAGCTT 1 cut(s) 2975
HphI GGTGA 8 cut(s) 899, 900, 1238, 2015, 2109, 3034, 3245, 3338
Hpy166II GTNNAC 8 cut(s) 475, 1376, 1390, 2155, 3207, 4033, 4140, 4348
Hpy8I GTNNAC 8 cut(s) 475, 1376, 1390, 2155, 3207, 4033, 4140, 4348
Hpy99I CGWCG 5 cut(s) 494, 731, 883, 1092, 4254
HpyCH4IV ACGT 7 cut(s) 677, 726, 1366, 2176, 4128, 4188, 4368
HpySE526I ACGT 7 cut(s) 677, 726, 1366, 2176, 4128, 4188, 4368
Hsp92I GRCGYC 4 cut(s) 176, 552, 582, 792
HspAI GCGC 5 cut(s) 176, 221, 223, 552, 1177
KasI GGCGCC 2 cut(s) 175, 551
KflI GGGWCCC 1 cut(s) 1775
Kpn2I TCCGGA 1 cut(s) 61
KroI GCCGGC 2 cut(s) 172, 773
KroNI GCCGGC 2 cut(s) 174, 775
Ksp22I TGATCA 1 cut(s) 3442
KspI CCGCGG 1 cut(s) 2513
LguI GCTCTTC 1 cut(s) 389
LmnI GCTCC 7 cut(s) 13, 64, 770, 1996, 2309, 2463, 3806
MaeI CTAG 8 cut(s) 561, 1151, 2061, 2409, 2784, 2933, 3039, 3906
MaeII ACGT 7 cut(s) 677, 726, 1366, 2176, 4128, 4188, 4368
MbiI CCGCTC 3 cut(s) 342, 532, 2712
MfeI CAATTG 2 cut(s) 192, 1314
MflI RGATCY 5 cut(s) 94, 1753, 1870, 2278, 3840
Mly113I GGCGCC 2 cut(s) 176, 552
MlyI GAGTC 4 cut(s) 1955, 2072, 3268, 3826
MmeI TCCRAC 5 cut(s) 220, 1111, 2135, 3212, 3409
Mph1103I ATGCAT 3 cut(s) 2418, 2764, 3569
MreI CGCCGGCG 1 cut(s) 172
MroI TCCGGA 1 cut(s) 61
MroNI GCCGGC 2 cut(s) 172, 773
MroXI GAANNNNTTC 1 cut(s) 4220
MseI TTAA 7 cut(s) 1020, 1245, 1382, 1502, 2897, 3435, 3720
MslI CAYNNNNRTG 5 cut(s) 902, 1474, 4263, 4312, 4353
MspA1I CMGCKG 3 cut(s) 711, 2512, 3529
MspCI CTTAAG 1 cut(s) 3719
MunI CAATTG 2 cut(s) 192, 1314
Mva1269I GAATGC 4 cut(s) 2418, 4066, 4090, 4444
MvnI CGCG 5 cut(s) 223, 225, 2512, 3913, 4474
NaeI GCCGGC 2 cut(s) 174, 775
NarI GGCGCC 2 cut(s) 176, 552
NciI CCSGG 7 cut(s) 277, 304, 317, 513, 669, 670, 2098
NgoMIV GCCGGC 2 cut(s) 172, 773
NheI GCTAGC 1 cut(s) 2783
NmeAIII GCCGAG 2 cut(s) 109, 497
NmuCI GTSAC 9 cut(s) 583, 906, 976, 1010, 2003, 2393, 3022, 3540, 4124
NruI TCGCGA 1 cut(s) 4474
NsbI TGCGCA 1 cut(s) 1178
NsiI ATGCAT 3 cut(s) 2418, 2764, 3569
NspI RCATGY 4 cut(s) 511, 1620, 2420, 2438
NspV TTCGAA 1 cut(s) 3280
OliI CACNNNNGTG 1 cut(s) 4353
PaeI GCATGC 1 cut(s) 2438
PagI TCATGA 4 cut(s) 736, 1404, 2911, 4258
PasI CCCWGGG 1 cut(s) 798
PauI GCGCGC 1 cut(s) 221
PceI AGGCCT 2 cut(s) 429, 2821
PciI ACATGT 1 cut(s) 1616
PciSI GCTCTTC 1 cut(s) 389
PcsI WCGNNNNNNNCGW 3 cut(s) 825, 1201, 1833
PctI GAATGC 4 cut(s) 2418, 4066, 4090, 4444
PdiI GCCGGC 2 cut(s) 174, 775
PdmI GAANNNNTTC 1 cut(s) 4220
Pfl23II CGTACG 1 cut(s) 4365
PflFI GACNNNGTC 1 cut(s) 581
PflMI CCANNNNNTGG 3 cut(s) 3899, 3983, 4388
PfoI TCCNGGA 1 cut(s) 2386
PinAI ACCGGT 1 cut(s) 3950
Ple19I CGATCG 1 cut(s) 4472
PleI GAGTC 4 cut(s) 1955, 2072, 3268, 3826
PluTI GGCGCC 2 cut(s) 179, 555
PpsI GAGTC 4 cut(s) 1955, 2072, 3268, 3826
Ppu21I YACGTR 2 cut(s) 678, 1367
PpuMI RGGWCCY 2 cut(s) 1775, 2798
PscI ACATGT 1 cut(s) 1616
Psp5II RGGWCCY 2 cut(s) 1775, 2798
PspFI CCCAGC 5 cut(s) 589, 962, 2648, 3129, 3822
PspLI CGTACG 1 cut(s) 4365
PspPPI RGGWCCY 2 cut(s) 1775, 2798
PstI CTGCAG 3 cut(s) 947, 2797, 3717
PstNI CAGNNNCTG 3 cut(s) 2801, 3104, 3983
PsuI RGATCY 5 cut(s) 94, 1753, 1870, 2278, 3840
PsyI GACNNNGTC 1 cut(s) 581
PteI GCGCGC 1 cut(s) 221
PvuI CGATCG 1 cut(s) 4472
PvuII CAGCTG 2 cut(s) 711, 3529
RgaI GCGATCGC 1 cut(s) 4472
RruI TCGCGA 1 cut(s) 4474
RseI CAYNNNNRTG 5 cut(s) 902, 1474, 4263, 4312, 4353
SacII CCGCGG 1 cut(s) 2513
SapI GCTCTTC 1 cut(s) 389
SaqAI TTAA 7 cut(s) 1020, 1245, 1382, 1502, 2897, 3435, 3720
SbfI CCTGCAGG 1 cut(s) 2797
ScaI AGTACT 1 cut(s) 1525
SchI GAGTC 4 cut(s) 1955, 2072, 3268, 3826
SdaI CCTGCAGG 1 cut(s) 2797
SfcI CTRYAG 7 cut(s) 943, 2274, 2439, 2692, 2793, 3057, 3713
SfoI GGCGCC 2 cut(s) 177, 553
Sfr303I CCGCGG 1 cut(s) 2513
SfuI TTCGAA 1 cut(s) 3280
SgfI GCGATCGC 1 cut(s) 4472
SgrAI CRCCGGYG 2 cut(s) 163, 172
SgrBI CCGCGG 1 cut(s) 2513
SinI GGWCC 4 cut(s) 627, 1775, 2798, 3185
SmaI CCCGGG 1 cut(s) 670
SmiMI CAYNNNNRTG 5 cut(s) 902, 1474, 4263, 4312, 4353
SmlI CTYRAG 4 cut(s) 2429, 3152, 3509, 3719
SmoI CTYRAG 4 cut(s) 2429, 3152, 3509, 3719
SphI GCATGC 1 cut(s) 2438
Sse8387I CCTGCAGG 1 cut(s) 2797
SseBI AGGCCT 2 cut(s) 429, 2821
SspDI GGCGCC 2 cut(s) 175, 551
SspI AATATT 1 cut(s) 3850
SspMI CTAG 8 cut(s) 561, 1151, 2061, 2409, 2784, 2933, 3039, 3906
StuI AGGCCT 2 cut(s) 429, 2821
StyI CCWWGG 2 cut(s) 252, 4286
TaiI ACGT 7 cut(s) 680, 729, 1369, 2179, 4131, 4191, 4371
TatI WGTACW 4 cut(s) 1318, 1523, 1781, 2366
TauI GCSGC 6 cut(s) 163, 172, 345, 532, 1082, 2712
Tru1I TTAA 7 cut(s) 1020, 1245, 1382, 1502, 2897, 3435, 3720
Tru9I TTAA 7 cut(s) 1020, 1245, 1382, 1502, 2897, 3435, 3720
TscAI CASTG 8 cut(s) 475, 1006, 1458, 2701, 3231, 3717, 4042, 4101
TseFI GTSAC 9 cut(s) 583, 906, 976, 1010, 2003, 2393, 3022, 3540, 4124
Tsp45I GTSAC 9 cut(s) 583, 906, 976, 1010, 2003, 2393, 3022, 3540, 4124
TspGWI ACGGA 6 cut(s) 478, 1029, 2450, 3230, 3245, 4353
TspMI CCCGGG 1 cut(s) 668
TspRI CASTG 8 cut(s) 475, 1006, 1458, 2701, 3231, 3717, 4042, 4101
Tth111I GACNNNGTC 1 cut(s) 581
Van91I CCANNNNNTGG 3 cut(s) 3899, 3983, 4388
Vha464I CTTAAG 1 cut(s) 3719
VneI GTGCAC 1 cut(s) 4138
VpaK11BI GGWCC 4 cut(s) 627, 1775, 2798, 3185
XapI RAATTY 5 cut(s) 968, 1623, 3580, 4115, 4217
XbaI TCTAGA 1 cut(s) 2408
XceI RCATGY 4 cut(s) 511, 1620, 2420, 2438
XcmI CCANNNNNNNNNTGG 1 cut(s) 1745
XmaI CCCGGG 1 cut(s) 668
XmnI GAANNNNTTC 1 cut(s) 4220
XspI CTAG 8 cut(s) 561, 1151, 2061, 2409, 2784, 2933, 3039, 3906
ZrmI AGTACT 1 cut(s) 1525
Zsp2I ATGCAT 3 cut(s) 2418, 2764, 3569
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.