Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0011462

Physical Location & Seq

Genomic Coordinates Reverse (-)

14082194 .. 14090842

Gene Structure 8649 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G159200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4461 bp

ATGTCTGCTTCAGGCTTAGCCGCAGAGCCGAACCAGGAGGTGTTTTCATGGCTCAAAACCCTACCAGTAGCTCCAGAGTACCACCCAACTTGGGCCGAGTTCCAAGATCCGATTGCCTACATTTTCAAGATCGAGAAGGAGGCTTCCAAGTACGGAATCTGCAAAATCGTGCCTCCGGTGCCGCCTTCTCCGAAGAAGACCGCAATTGCGAACCTGAACCGGTCTCTGGCGGCTCGGGCCGGCCCTTCGGGGGCCCCAGGCACTAAATCTCAGCCCACATTCACTACCCGGCAGCAGCAGATCGGGTTCTGCCCTCGGAAACCCCGACCAGTGAACCGACCCGTGTGGCAGAGCGGCGAGTACTACACTTTTCAGCAATTCGAAGCGAAAGCCAAGAGCTTTGAAAAGACTTACTTGAGAAAATGTAACAAAAAAGGAGGGCTTTCACCTCTGGATATCGAAACCCTTTACTGGAAAGCGACTGTGGACAAACCCTTTTCTGTAGAGTATGCCAACGACATGCCCGGTTCGGCTTTCGTTCCGGTAAGTGCCAGAAAGAGTAGTACTAGTAGAGATGCAGGAGACAATGTGACCCTTGGTGAGACTGCTTGGAATATGAGGGGGGTGTCAAGGTCAAAAGGGTCTTTGTTGAGGTTTATGAAGGAGGAGATTCCGGGGGTTACATCACCTATGGTGTATATAGCTATGTTGTTCAGCTGGTTTGCTTGGCATGTGGAGGACCACGACTTACATAGCTTGAATTATCTGCATATGGGAGCAGGGAAGACGTGGTATGGCGTGCCTAGGGAAGCAGCGGTTGCTTTCGAGGAGGTGGTGAGGGTGCAGGGTTATGCAGGAGAGATCAATCCTCTTGTTACTTTTTCAACCCTTGGTCAGAAGACCACTGTGATGTCACCTGAAGTATTTATCAGTTCAGGAATTCCATGCTGCAGGCTTGTGCAAAATGCTGGGGAGTTTGTCGTGACTTTCCCAAGAGCCTATCACACTGGATTCAGTCATGGATTTAATTGTGGGGAGGCAGCTAACATTGCAACTCCTGAATGGTTGAGGGTTGCAAAAGATGCCGCTATTCGACGGGCTTCAATCAATTATCCTCCTATGGTGTCTCATTTTCAATTACTTTATGATCTCGCTTTAGCATTATGTTCAAGAATGCCTGCGCGCATTTGTGCTGAACCACGGAGTTCTCGACTAAAAGATAAGAGAAAGGGTGAAGGAGAAGCGGTAGTTAAAGAGCTATTCGTGCAGAATGTTATTCAGAACAATGACCTGCTTCACGTTCTAGGAAAAGGGTCGTCAATTGTACTTCTACCGCAGAGTTCTTCAGACCTTTCTTTTTGTTCAAAATTACGTGTTGGTTCACATTTAAGAGTAAACCCTGGCTTTGCCAATGGTTTATACGATCAGAGGGAAGAAATGAAATCCTCAGGTTCTGATTCTGATGGTCTCTTGATAGACAGACAGCATGGAATCAAACAGGTTAAAGGTGGCTATTCAGTGAAAGGAAAACTTGCATCTTTATGTGAAAGTAATAGGCTTCCCTCATTAAGTGGAAATAATGATGCACATGCCCTGAATTCAAAGAGATTGAACATGAACATTGAAAGAGAAAGTAATGTCGAAGGTGAAGGGTTGTCAGATCAGAGACTGTTTTCTTGTGTTACATGTGGAATTTTGAGCTTTGCTTGTGTTGCTATAATTCAACCAACAGAAGCAGCAGCCAGATATCTAATGTCAGCAGATCGTAGCTTTTTCAGTGATTGGGTTGTTGGATCTGGATTAGCTGGTGAGGTGTTCCAGGTTGCAAATGAAGATCCAATCACTTCAAAGGATGATCCTTGCACAGGATTGGTGGAAAACAATGCCCCTGCTGGTTTATATGATGTGCCTGTTCAATCTGCTGATTATCAAATTCAGAGGGGAGATCAAAGTAATAAACCCGTTTCAAATACTGAAATGCAGAGAGATACTTCAGCTCTTGGGCTTTTAGCTTTAAACTATGGAAATTCGTCTGACTCGGAGGAAGATCAACTTGCACCAGATGTTCCTGTTTGTTGTGATGAAACAAACACGACAAACTGTTCTTTTGAAAGTAGATATGATTACCAGAGTGCTAGTCCTTCTCCTTTAAGAGACTCTTATGGTGGTACAACTGAGGCTCACAGTCCCCCATCACCAGGATTTGATTGTGGGAATGAACTTCCTCTCCAAAGCCCTGATCACTATGCGAGAGATGGACGTAAAATAGCTAATTTCAAGGATAGCAGCTATCAAAATTTTGATTTCTCTGCTGATTTTAAAAATAATTCTGCTTCCACAAAGACGAATGGTTTGGTGGGTACATCTATGGATCCAATGAAACTTTCACATTCTTGCTCCCCAGATGCTCATCGGCCTCAAACAACAGAATTGTCAAAGGTCACTTTACCCATAGAAACCACAAATACAGCGTTTCCTCCAGGATGCGATGAAGACTCTTCCAGAATGCATGTCTTCTGCCTTGAGCATGCTATAGAGGTCGAACAGCAGCTTCGTTCAATTGGAGGTGTCCATATATTTCTCCTTTGTCATCCAGACTACCCGAGGATAGAGGATGAAGCAAAATTAATGGCAGAAGAACTGGGAATAAGTTATCTCTGGAATGAAACGACATTCAGGGATGCCACTGAGGAAGATGAGAAGAGAATTCAGTCAGCTCTGGATAGTGAGGAAGCCATTGCGGGGAATGGGGACTGGGCTGTAAAGTTGGGGATCAATCTCTTCTACAGTGCCAGCCTTAGCCGTTCTCATCTTTACAGTAAGCAGATGGCATACAATTCTGTTATATACAATGCATTTGGTCGTAGTTCTCCAGCTAGCTCGCCCACAAGAACTGATGTCTATGGGAGGAGATCTGGCAAGCAGAAAAAGGTAGTGGCAGGGAAATGGTGTGGTAAAGTCTGGATGTCGAATCAAGTTCATCCCTATCTAGCAAAAAGGGACCCTGAAGAAGAAGAAGAAGTAGTAGAAGAAGAACATAGGAGCTTCCATGCTTGGGCAATGCCAGATGAGAAGCTTGAGGGACAACCAGAAAGCACACGCAAAACTGAGAACACCTTGGTGACTAAAAAATATGCTAGGAAGAGGAAAATGACTGCAGAGACCGGGACAACGAAGAAAGTAAAATGTTTGGAGAAAGAAGATGCTGTTTCAGATTATTCAGTAGATGATAACTCCCATCAGCAGCAGAGGAGGTTTCCTAAGAGCAAGCAAGCTGAATATATTGAGAGTGGTCCAACCAAGAAAGCCAAGTTTGTTCAGACAGAATTTACTCTTTCAGATGATTCAATGCAAGATGATTCTCATCAGCCAGATGGTAGAAATTTTCGGTGTGAGCAAGCCAATTATATTGAGGGAAATGATGTTTCAGATGATTCAGTGGGAGTTGAATCTCATCAGCAGCATAGGAGGAGTGCTAAAAGTAAGCAAGCCAAACATATGGAAAGAGATGTGGTTTCAGATGATTCAGTTGAGGGTAGTTCTCGTCAGCAGCATGGGAGGGTCCTTAGAAGCAAGACAGCTAAGGGTGAAACAGATAATTTTCACAAGGCTAGTTCTCATCAAGAACGAGGGAGTATTTCTAAAAGCAAGCAGGCCAGATTCATTGAGAGAGATGATGCAGCTGTGGGTGAAACAGATAATTTTCTTCAGCAGCACAAGAGGATTCTCCGAAGCAAGCAAACGCAACAAGAGACCCTTCAGAAAATGAGACGAGAAACCCCTCGGCAAGTGAAACAAGGAACTGCTCTTCTTGTGAAACAAGGCACCCGCACTCTAAGAAAGCAACAAACCGGTCAGCAAATGAAGCAACAGACACCTAGGCTCCGAAATAATCAATCTGAGCAGAACTTTGATTTGTATGCTGATGAGGGGGCAGAAGGCGGACCTAGCACACGCCTTAGAAAAAGAGCTCCTAAGCCCATTAAAGTCTCTGGAACCAAACCAAAAGAGCAGCAACAAACGGCTAGGAAAAAGGCAAAGAATGTTTCAGCTGTGAAGTCTCAGGCTGGCCAAAATGATGCAAAATTGAGGGAAGAGGAAGCAGAATTCTCGTGTGATATTGATGGGTGCACCATGAGTCTAGGCTCGAAACAAGAGCTTGCCCTCCACAAAAGAAACATATGTCCAGTCAAGGGGTGCGGAAAGAAATTCTTCTCTCACAAGTATCTGGTGCAACATCGTCGAGTTCACACGGATGACCGCCCCCTTCGGTGCCCTTGGAAGGGCTGCAAGATGACATTCAAGTGGGCATGGGCTCGGACTGAGCACATTAGGGTTCACACAGGTGCTCGTCCCTATGTATGTGCTGAGCCAGGGTGTGGGCAGACCTTCCGATTTGTCTCAGATTTCAGCCGCCATAAGCGGAAGACTGGACATTCAGCAAAGAAAAGTAGGGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006325 GO:0006464 GO:0006482 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008214 GO:0009653 GO:0009719 GO:0009725 GO:0009741 GO:0009791 GO:0009826 GO:0009892 GO:0009987 GO:0010033 GO:0010228 GO:0010605 GO:0010639 GO:0014070 GO:0016043 GO:0016049 GO:0016569 GO:0016570 GO:0016577 GO:0019222 GO:0019538 GO:0022414 GO:0031056 GO:0031057 GO:0031323 GO:0031324 GO:0031399 GO:0031400 GO:0032268 GO:0032269 GO:0032501 GO:0032502 GO:0032989 GO:0033043 GO:0033044 GO:0033169 GO:0033993 GO:0035065 GO:0035067 GO:0036211 GO:0040007 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048366 GO:0048367 GO:0048519 GO:0048523 GO:0048589 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051129 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0051276 GO:0060255 GO:0060560 GO:0061458 GO:0065007 GO:0070076 GO:0070988 GO:0071704 GO:0071840 GO:0080090 GO:0099402 GO:1901564 GO:1901700 GO:1901983 GO:1901984 GO:1902275 GO:1905268 GO:2000756 GO:2000757 GO:2001251

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

JmjC JmjN zf-C2H2

Protein Analysis

1487

Amino Acids

165.8

Weight (kDa)

8.73

Isoelectric Point (pI)

54.9

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011462)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48430 AT3G48430
fragaria_vesca	FvH4_5g07090 FvH4_5g07090 FvH4_5g07090
malus_domestica	MD06G1159300.v1.1 MD14G1165600.v1.1
prunus_persica	Prupe.5G159200_v2.0.a1
pyrus_communis	pycom06g14210 pycom14g13810
rosa_chinensis	RchiOBHm_Chr7g0191461
rosa_laevigata	RLG00000004448
rosa_multiflora	Rmu_sc0002661.1_g000009
rosa_roxburghii	Rroxscaffold_157G00438400 Rroxscaffold_3G00263790
rosa_rugosa	Rorug06G0510400
rosa_samantha	Rh7AG118500 Rh7BG120500 Rh7CG123300 Rh7DG121400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1299
AccB1I	GGYRCC	3 cut(s)	178, 3824, 4272
AccB7I	CCANNNNNTGG	1 cut(s)	4379
AccBSI	CCGCTC	1 cut(s)	354
AccII	CGCG	1 cut(s)	1183
AclWI	GGATC	7 cut(s)	101, 1801, 1829, 1850, 2366, 2379, 2780
AcoI	YGGCCR	1 cut(s)	4069
AcuI	CTGAAG	6 cut(s)	939, 1329, 1977, 3027, 3692, 3743
AfaI	GTAC	7 cut(s)	80, 152, 362, 565, 1326, 2170, 2362
AflIII	ACRYGT	2 cut(s)	1372, 1685
AgeI	ACCGGT	2 cut(s)	219, 3851
AhlI	ACTAGT	1 cut(s)	566
AjiI	CACGTC	1 cut(s)	789
AjnI	CCWGG	7 cut(s)	33, 256, 1399, 1818, 2197, 2479, 4372
AjuI	GAANNNNNNNTTGG	2 cut(s)	2368, 2400
AleI	CACNNNNGTG	2 cut(s)	3119, 4344
AloI	GAACNNNNNNTCC	2 cut(s)	2211, 2243
Alw21I	GWGCWC	4 cut(s)	3973, 4133, 4329, 4351
Alw44I	GTGCAC	1 cut(s)	4129
AlwI	GGATC	7 cut(s)	101, 1801, 1829, 1850, 2366, 2379, 2780
AlwNI	CAGNNNCTG	2 cut(s)	1454, 1669
Ama87I	CYCGRG	2 cut(s)	234, 2602
AoxI	GGCC	7 cut(s)	93, 237, 241, 252, 2414, 3654, 4069
ApaI	GGGCCC	1 cut(s)	256
ApaLI	GTGCAC	1 cut(s)	4129
ArsI	GACNNNNNNTTYG	2 cut(s)	2335, 2367
AseI	ATTAAT	1 cut(s)	2627
AsiGI	ACCGGT	2 cut(s)	219, 3851
Asp700I	GAANNNNTTC	1 cut(s)	4211
AspA2I	CCTAGG	2 cut(s)	803, 3878
AspLEI	GCGC	2 cut(s)	1183, 1185
AsuC2I	CCSGG	4 cut(s)	289, 525, 675, 3166
AsuII	TTCGAA	1 cut(s)	381
AsuNHI	GCTAGC	1 cut(s)	2876
AvaI	CYCGRG	2 cut(s)	234, 2602
AvaII	GGWCC	5 cut(s)	739, 3001, 3293, 3562, 3944
AvrII	CCTAGG	2 cut(s)	803, 3878
AxyI	CCTNAGG	1 cut(s)	1447
BaeGI	GKGCMC	3 cut(s)	256, 4133, 4277
BalI	TGGCCA	1 cut(s)	4071
BamHI	GGATCC	1 cut(s)	2371
BanI	GGYRCC	3 cut(s)	178, 3824, 4272
BanII	GRGCYC	3 cut(s)	256, 3973, 4318
BauI	CACGAG	1 cut(s)	4111
BbsI	GAAGAC	6 cut(s)	203, 791, 905, 2499, 2506, 4433
Bbv12I	GWGCWC	4 cut(s)	3973, 4133, 4329, 4351
BccI	CCATC	7 cut(s)	1457, 2200, 2249, 2821, 3246, 3368, 4118
BceAI	ACGGC	2 cut(s)	2787, 4038
BcgI	CGANNNNNNTGC	4 cut(s)	4092, 4126, 4223, 4257
BciT130I	CCWGG	7 cut(s)	35, 258, 1401, 1820, 2199, 2481, 4374
BclI	TGATCA	1 cut(s)	2239
BcnI	CCSGG	4 cut(s)	289, 525, 675, 3166
BcuI	ACTAGT	1 cut(s)	566
BfmI	CTRYAG	5 cut(s)	501, 949, 2532, 2785, 3156
BfuAI	ACCTGC	1 cut(s)	1299
BglII	AGATCT	1 cut(s)	2912
BlnI	CCTAGG	2 cut(s)	803, 3878
BlpI	GCTNAGC	2 cut(s)	16, 4368
BmcAI	AGTACT	2 cut(s)	362, 565
Bme18I	GGWCC	5 cut(s)	739, 3001, 3293, 3562, 3944
BmeT110I	CYCGRG	2 cut(s)	234, 2602
BmgBI	CACGTC	1 cut(s)	789
BmrI	ACTGGG	2 cut(s)	2651, 2764
BmtI	GCTAGC	1 cut(s)	2880
BmuI	ACTGGG	2 cut(s)	2651, 2764
BpiI	GAAGAC	6 cut(s)	203, 791, 905, 2499, 2506, 4433
BpmI	CTGGAG	3 cut(s)	57, 2463, 2856
Bpu10I	CCTNAGC	3 cut(s)	2798, 3582, 3975
Bpu1102I	GCTNAGC	2 cut(s)	16, 4368
Bpu14I	TTCGAA	1 cut(s)	381
BpuEI	CTTGAG	3 cut(s)	436, 2543, 3098
BpuMI	CCSGG	4 cut(s)	289, 525, 675, 3166
BsaAI	YACGTR	1 cut(s)	1373
BsaBI	GATNNNNATC	2 cut(s)	2409, 3363
BsaI	GGTCTC	4 cut(s)	228, 1472, 3155, 3746
BsaWI	WCCGGW	4 cut(s)	175, 219, 541, 3851
BsaXI	ACNNNNNCTCC	8 cut(s)	573, 603, 1230, 1260, 2211, 2241, 3867, 3897
Bse118I	RCCGGY	3 cut(s)	219, 239, 3851
Bse1I	ACTGG	8 cut(s)	65, 329, 476, 1012, 2646, 2759, 4187, 4435
Bse21I	CCTNAGG	1 cut(s)	1447
Bse3DI	GCAATG	3 cut(s)	1047, 2736, 3066
Bse8I	GATNNNNATC	2 cut(s)	2409, 3363
BseBI	CCWGG	7 cut(s)	35, 258, 1401, 1820, 2199, 2481, 4374
BseGI	GGATG	8 cut(s)	1858, 2489, 2590, 2620, 2686, 2970, 2980, 4261
BseJI	GATNNNNATC	2 cut(s)	2409, 3363
BseMI	GCAATG	3 cut(s)	1047, 2736, 3066
BseNI	ACTGG	8 cut(s)	65, 329, 476, 1012, 2646, 2759, 4187, 4435
BsePI	GCGCGC	1 cut(s)	1181
BseRI	GAGGAG	5 cut(s)	680, 842, 2923, 3265, 3484
BseSI	GKGCMC	3 cut(s)	256, 4133, 4277
BseYI	CCCAGC	1 cut(s)	968
BsgI	GTGCAG	2 cut(s)	863, 1286
Bsh1236I	CGCG	1 cut(s)	1183
BshFI	GGCC	7 cut(s)	95, 239, 243, 254, 2416, 3656, 4071
BshNI	GGYRCC	3 cut(s)	178, 3824, 4272
BshTI	ACCGGT	2 cut(s)	219, 3851
BsiHKAI	GWGCWC	4 cut(s)	3973, 4133, 4329, 4351
BsiHKCI	CYCGRG	2 cut(s)	234, 2602
BsiSI	CCGG	9 cut(s)	176, 220, 240, 289, 525, 542, 674, 3165, 3852
BslFI	GGGAC	6 cut(s)	2172, 2765, 3014, 3096, 3181, 4338
BsmBI	CGTCTC	1 cut(s)	3763
BsmFI	GGGAC	6 cut(s)	2172, 2765, 3014, 3096, 3181, 4338
BsmI	GAATGC	2 cut(s)	1179, 2511
BsnI	GGCC	7 cut(s)	95, 239, 243, 254, 2416, 3656, 4071
Bso31I	GGTCTC	4 cut(s)	228, 1472, 3155, 3746
BsoBI	CYCGRG	2 cut(s)	234, 2602
Bsp119I	TTCGAA	1 cut(s)	381
Bsp120I	GGGCCC	1 cut(s)	252
Bsp1286I	GDGCHC	7 cut(s)	256, 3973, 4133, 4277, 4318, 4329, 4351
Bsp1720I	GCTNAGC	2 cut(s)	16, 4368
BspANI	GGCC	7 cut(s)	95, 239, 243, 254, 2416, 3656, 4071
BspFNI	CGCG	1 cut(s)	1183
BspMAI	CTGCAG	2 cut(s)	953, 3160
BspMI	ACCTGC	1 cut(s)	1299
BspOI	GCTAGC	1 cut(s)	2880
BspPI	GGATC	7 cut(s)	101, 1801, 1829, 1850, 2366, 2379, 2780
BspQI	GCTCTTC	1 cut(s)	3813
BspT104I	TTCGAA	1 cut(s)	381
BspT107I	GGYRCC	3 cut(s)	178, 3824, 4272
BspTNI	GGTCTC	4 cut(s)	228, 1472, 3155, 3746
BsrBI	CCGCTC	1 cut(s)	354
BsrDI	GCAATG	3 cut(s)	1047, 2736, 3066
BsrFI	RCCGGY	3 cut(s)	219, 239, 3851
BsrI	ACTGG	8 cut(s)	65, 329, 476, 1012, 2646, 2759, 4187, 4435
BssAI	RCCGGY	3 cut(s)	219, 239, 3851
BssHII	GCGCGC	1 cut(s)	1181
BssSI	CACGAG	1 cut(s)	4111
BssT1I	CCWWGG	6 cut(s)	595, 803, 889, 3117, 3878, 4277
Bst2BI	CACGAG	1 cut(s)	4111
Bst2UI	CCWGG	7 cut(s)	35, 258, 1401, 1820, 2199, 2481, 4374
Bst4CI	ACNGT	7 cut(s)	484, 907, 1671, 2102, 2186, 2789, 2819
Bst6I	CTCTTC	6 cut(s)	2503, 2696, 2786, 3137, 3813, 4089
BstAPI	GCANNNNNTGC	2 cut(s)	818, 1082
BstBAI	YACGTR	1 cut(s)	1373
BstBI	TTCGAA	1 cut(s)	381
BstDSI	CCRYGG	1 cut(s)	1199
BstENI	CCTNNNNNAGG	1 cut(s)	1863
BstF5I	GGATG	8 cut(s)	1858, 2489, 2590, 2620, 2686, 2970, 2980, 4261
BstFNI	CGCG	1 cut(s)	1183
BstHHI	GCGC	2 cut(s)	1183, 1185
BstMWI	GCNNNNNNNGC	9 cut(s)	178, 236, 818, 1049, 1082, 1264, 1712, 3865, 3948
BstNI	CCWGG	7 cut(s)	35, 258, 1401, 1820, 2199, 2481, 4374
BstNSI	RCATGY	6 cut(s)	523, 734, 1592, 1689, 2513, 2531
BstSFI	CTRYAG	5 cut(s)	501, 949, 2532, 2785, 3156
BstSLI	GKGCMC	3 cut(s)	256, 4133, 4277
BstUI	CGCG	1 cut(s)	1183
BstV2I	GAAGAC	6 cut(s)	203, 791, 905, 2499, 2506, 4433
BstX2I	RGATCY	5 cut(s)	106, 1793, 1834, 2371, 2912
BstXI	CCANNNNNNTGG	1 cut(s)	3499
BstYI	RGATCY	5 cut(s)	106, 1793, 1834, 2371, 2912
Bsu36I	CCTNAGG	1 cut(s)	1447
BsuRI	GGCC	7 cut(s)	95, 239, 243, 254, 2416, 3656, 4071
BtgI	CCRYGG	1 cut(s)	1199
BtgZI	GCGATG	1 cut(s)	2502
BtrI	CACGTC	1 cut(s)	789
BtsCI	GGATG	8 cut(s)	1858, 2489, 2590, 2620, 2686, 2970, 2980, 4261
BtsIMutI	CAGTG	8 cut(s)	336, 903, 1005, 1524, 1783, 2685, 2794, 3444
BveI	ACCTGC	1 cut(s)	1299
CaiI	CAGNNNCTG	2 cut(s)	1454, 1669
CfoI	GCGC	2 cut(s)	1183, 1185
Cfr10I	RCCGGY	3 cut(s)	219, 239, 3851
Csp6I	GTAC	7 cut(s)	79, 151, 361, 564, 1325, 2169, 2361
CspAI	ACCGGT	2 cut(s)	219, 3851
CspCI	CAANNNNNGTGG	2 cut(s)	71, 106
CviQI	GTAC	7 cut(s)	79, 151, 361, 564, 1325, 2169, 2361
DraI	TTTAAA	2 cut(s)	2016, 2320
EaeI	YGGCCR	1 cut(s)	4069
Eam1104I	CTCTTC	6 cut(s)	2503, 2696, 2786, 3137, 3813, 4089
EarI	CTCTTC	6 cut(s)	2503, 2696, 2786, 3137, 3813, 4089
EciI	GGCGGA	1 cut(s)	3957
Ecl136II	GAGCTC	1 cut(s)	3971
Eco130I	CCWWGG	6 cut(s)	595, 803, 889, 3117, 3878, 4277
Eco24I	GRGCYC	3 cut(s)	256, 3973, 4318
Eco31I	GGTCTC	4 cut(s)	228, 1472, 3155, 3746
Eco32I	GATATC	2 cut(s)	457, 1748
Eco47I	GGWCC	5 cut(s)	739, 3001, 3293, 3562, 3944
Eco53kI	GAGCTC	1 cut(s)	3971
Eco57I	CTGAAG	6 cut(s)	939, 1329, 1977, 3027, 3692, 3743
Eco81I	CCTNAGG	1 cut(s)	1447
Eco88I	CYCGRG	2 cut(s)	234, 2602
EcoICRI	GAGCTC	1 cut(s)	3971
EcoNI	CCTNNNNNAGG	1 cut(s)	1863
EcoO109I	RGGNCCY	4 cut(s)	252, 253, 3001, 3562
EcoRI	GAATTC	4 cut(s)	939, 1597, 2706, 4106
EcoRII	CCWGG	7 cut(s)	33, 256, 1399, 1818, 2197, 2479, 4372
EcoRV	GATATC	2 cut(s)	457, 1748
EcoT14I	CCWWGG	6 cut(s)	595, 803, 889, 3117, 3878, 4277
EcoT22I	ATGCAT	2 cut(s)	2511, 2857
EcoT38I	GRGCYC	3 cut(s)	256, 3973, 4318
ErhI	CCWWGG	6 cut(s)	595, 803, 889, 3117, 3878, 4277
Esp3I	CGTCTC	1 cut(s)	3763
FaqI	GGGAC	6 cut(s)	2172, 2765, 3014, 3096, 3181, 4338
FauI	CCCGC	2 cut(s)	2734, 3836
FauNDI	CATATG	3 cut(s)	771, 3498, 4181
FbaI	TGATCA	1 cut(s)	2239
FokI	GGATG	8 cut(s)	1865, 2496, 2577, 2627, 2693, 2967, 2977, 4268
FriOI	GRGCYC	3 cut(s)	256, 3973, 4318
FseI	GGCCGGCC	1 cut(s)	243
GlaI	GCGC	2 cut(s)	1182, 1184
GsaI	CCCAGC	1 cut(s)	972
GsuI	CTGGAG	3 cut(s)	57, 2463, 2856
HaeIII	GGCC	7 cut(s)	95, 239, 243, 254, 2416, 3656, 4071
HapII	CCGG	9 cut(s)	176, 220, 240, 289, 525, 542, 674, 3165, 3852
HhaI	GCGC	2 cut(s)	1183, 1185
Hin6I	GCGC	2 cut(s)	1181, 1183
HinP1I	GCGC	2 cut(s)	1181, 1183
HindIII	AAGCTT	1 cut(s)	3074
HpaII	CCGG	9 cut(s)	176, 220, 240, 289, 525, 542, 674, 3165, 3852
Hpy166II	GTNNAC	7 cut(s)	334, 487, 1382, 1396, 4131, 4249, 4339
Hpy8I	GTNNAC	7 cut(s)	334, 487, 1382, 1396, 4131, 4249, 4339
Hpy99I	CGWCG	2 cut(s)	1098, 4245
HpyCH4III	ACNGT	7 cut(s)	484, 907, 1671, 2102, 2186, 2789, 2819
HpyCH4IV	ACGT	4 cut(s)	788, 1299, 1372, 2260
HpyF10VI	GCNNNNNNNGC	9 cut(s)	178, 236, 818, 1049, 1082, 1264, 1712, 3865, 3948
HpySE526I	ACGT	4 cut(s)	788, 1299, 1372, 2260
HspAI	GCGC	2 cut(s)	1181, 1183
KflI	GGGWCCC	1 cut(s)	3001
KroI	GCCGGC	1 cut(s)	239
KroNI	GCCGGC	1 cut(s)	241
Ksp22I	TGATCA	1 cut(s)	2239
LguI	GCTCTTC	1 cut(s)	3813
LmnI	GCTCC	6 cut(s)	76, 776, 2402, 3042, 3888, 3976
MaeII	ACGT	4 cut(s)	788, 1299, 1372, 2260
MaeIII	GTNAC	9 cut(s)	425, 589, 679, 874, 912, 982, 1681, 2440, 3121
MbiI	CCGCTC	1 cut(s)	354
MfeI	CAATTG	3 cut(s)	204, 1320, 2559
MflI	RGATCY	5 cut(s)	106, 1793, 1834, 2371, 2912
MhlI	GDGCHC	7 cut(s)	256, 3973, 4133, 4277, 4318, 4329, 4351
MlsI	TGGCCA	1 cut(s)	4071
MluNI	TGGCCA	1 cut(s)	4071
MlyI	GAGTC	4 cut(s)	2030, 2150, 2489, 4147
MmeI	TCCRAC	2 cut(s)	1771, 3320
Mox20I	TGGCCA	1 cut(s)	4071
Mph1103I	ATGCAT	2 cut(s)	2511, 2857
MroNI	GCCGGC	1 cut(s)	239
MroXI	GAANNNNTTC	1 cut(s)	4211
MscI	TGGCCA	1 cut(s)	4071
MslI	CAYNNNNRTG	6 cut(s)	908, 1540, 3119, 4254, 4303, 4344
Msp20I	TGGCCA	1 cut(s)	4071
MspA1I	CMGCKG	4 cut(s)	717, 815, 3683, 4052
MspI	CCGG	9 cut(s)	176, 220, 240, 289, 525, 542, 674, 3165, 3852
MunI	CAATTG	3 cut(s)	204, 1320, 2559
Mva1269I	GAATGC	2 cut(s)	1179, 2511
MvaI	CCWGG	7 cut(s)	35, 258, 1401, 1820, 2199, 2481, 4374
MvnI	CGCG	1 cut(s)	1183
MwoI	GCNNNNNNNGC	9 cut(s)	178, 236, 818, 1049, 1082, 1264, 1712, 3865, 3948
NaeI	GCCGGC	1 cut(s)	241
NciI	CCSGG	4 cut(s)	289, 525, 675, 3166
NdeI	CATATG	3 cut(s)	771, 3498, 4181
NgoMIV	GCCGGC	1 cut(s)	239
NheI	GCTAGC	1 cut(s)	2876
NmeAIII	GCCGAG	2 cut(s)	121, 3763
NmuCI	GTSAC	5 cut(s)	589, 912, 982, 2440, 3121
NsiI	ATGCAT	2 cut(s)	2511, 2857
NspI	RCATGY	6 cut(s)	523, 734, 1592, 1689, 2513, 2531
NspV	TTCGAA	1 cut(s)	381
OliI	CACNNNNGTG	2 cut(s)	3119, 4344
PaeI	GCATGC	1 cut(s)	2531
PauI	GCGCGC	1 cut(s)	1181
PciI	ACATGT	1 cut(s)	1685
PciSI	GCTCTTC	1 cut(s)	3813
PcsI	WCGNNNNNNNCGW	2 cut(s)	322, 1207
PctI	GAATGC	2 cut(s)	1179, 2511
PdiI	GCCGGC	1 cut(s)	241
PdmI	GAANNNNTTC	1 cut(s)	4211
PflMI	CCANNNNNTGG	1 cut(s)	4379
PfoI	TCCNGGA	1 cut(s)	2479
PinAI	ACCGGT	2 cut(s)	219, 3851
PleI	GAGTC	4 cut(s)	2030, 2150, 2489, 4146
PpsI	GAGTC	4 cut(s)	2030, 2150, 2489, 4146
Ppu21I	YACGTR	1 cut(s)	1373
PpuMI	RGGWCCY	2 cut(s)	3001, 3562
PscI	ACATGT	1 cut(s)	1685
PshBI	ATTAAT	1 cut(s)	2627
Psp124BI	GAGCTC	1 cut(s)	3973
Psp5II	RGGWCCY	2 cut(s)	3001, 3562
Psp6I	CCWGG	7 cut(s)	33, 256, 1399, 1818, 2197, 2479, 4372
PspFI	CCCAGC	1 cut(s)	968
PspGI	CCWGG	7 cut(s)	33, 256, 1399, 1818, 2197, 2479, 4372
PspOMI	GGGCCC	1 cut(s)	252
PspPPI	RGGWCCY	2 cut(s)	3001, 3562
PstI	CTGCAG	2 cut(s)	953, 3160
PstNI	CAGNNNCTG	2 cut(s)	1454, 1669
PsuI	RGATCY	5 cut(s)	106, 1793, 1834, 2371, 2912
PteI	GCGCGC	1 cut(s)	1181
PvuII	CAGCTG	3 cut(s)	717, 3683, 4052
RigI	GGCCGGCC	1 cut(s)	243
RsaI	GTAC	7 cut(s)	80, 152, 362, 565, 1326, 2170, 2362
RsaNI	GTAC	7 cut(s)	79, 151, 361, 564, 1325, 2169, 2361
RseI	CAYNNNNRTG	6 cut(s)	908, 1540, 3119, 4254, 4303, 4344
SacI	GAGCTC	1 cut(s)	3973
SapI	GCTCTTC	1 cut(s)	3813
ScaI	AGTACT	2 cut(s)	362, 565
SchI	GAGTC	4 cut(s)	2030, 2150, 2489, 4147
SduI	GDGCHC	7 cut(s)	256, 3973, 4133, 4277, 4318, 4329, 4351
SfcI	CTRYAG	5 cut(s)	501, 949, 2532, 2785, 3156
SfuI	TTCGAA	1 cut(s)	381
SinI	GGWCC	5 cut(s)	739, 3001, 3293, 3562, 3944
SmiMI	CAYNNNNRTG	6 cut(s)	908, 1540, 3119, 4254, 4303, 4344
SmlI	CTYRAG	3 cut(s)	415, 2522, 3077
SmoI	CTYRAG	3 cut(s)	415, 2522, 3077
SpeI	ACTAGT	1 cut(s)	566
SphI	GCATGC	1 cut(s)	2531
SstI	GAGCTC	1 cut(s)	3973
StyI	CCWWGG	6 cut(s)	595, 803, 889, 3117, 3878, 4277
TaaI	ACNGT	7 cut(s)	484, 907, 1671, 2102, 2186, 2789, 2819
TaiI	ACGT	4 cut(s)	791, 1302, 1375, 2263
TatI	WGTACW	3 cut(s)	360, 563, 1324
TauI	GCSGC	6 cut(s)	23, 184, 233, 357, 1088, 4416
TscAI	CASTG	8 cut(s)	336, 910, 1012, 1524, 1783, 2692, 2794, 3444
TseFI	GTSAC	5 cut(s)	589, 912, 982, 2440, 3121
Tsp45I	GTSAC	5 cut(s)	589, 912, 982, 2440, 3121
TspGWI	ACGGA	3 cut(s)	168, 1216, 4268
TspRI	CASTG	8 cut(s)	336, 910, 1012, 1524, 1783, 2692, 2794, 3444
Van91I	CCANNNNNTGG	1 cut(s)	4379
VneI	GTGCAC	1 cut(s)	4129
VpaK11BI	GGWCC	5 cut(s)	739, 3001, 3293, 3562, 3944
VspI	ATTAAT	1 cut(s)	2627
XagI	CCTNNNNNAGG	1 cut(s)	1863
XceI	RCATGY	6 cut(s)	523, 734, 1592, 1689, 2513, 2531
XmaJI	CCTAGG	2 cut(s)	803, 3878
XmnI	GAANNNNTTC	1 cut(s)	4211
ZrmI	AGTACT	2 cut(s)	362, 565
Zsp2I	ATGCAT	2 cut(s)	2511, 2857

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.