Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr14

Orthogroup ID

OG0011462

Physical Location & Seq

Genomic Coordinates Reverse (-)

16663471 .. 16667969

Gene Structure 4499 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom14g13810.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3315 bp

ATGCTGCTATTCGACGAGCGTCAATCAATTAGCCTCCGATGGTGTCTCATTTTCAATTACTTGATCGATCTTGCTTTAGCATTGTGTTCAAGAATGCCTTCTCGCATTAGTTCTGAACCACGGAGTTCTCGACTGAAAGATAAGAGAAAGTGTGAAGGAGACATAGTAGTTAAAGAGCTATTTGTACAGGATGTCATTCAGAACAATGACCTGCTTAATGTTCTTGGAAAAGGGTCACCAATTGTCCTTCTACCGCAAAGTTCTTCAGACCTTTCTGTTTGTTCAAAATTACGTGTTGGTTCACAGTCAAGAGTAAACCCTGGATTTTCCCAGGGTTCACACAGTCTGAGGGAAGAAATGAAATCCTCAGGCTCAGTTTCTGATGGTCTCATGATAGACAGGCAGCAGGTTAAAGGTTTCTATTCAGTGAGAGGAAAACTTGCATCTCCAAGTGAAAGTAATACTCTTGCCTCTTTAAGTGGATCTAACAATGTACGCGGCCTGAATTCGAAGAGGTCAAACTTGAACTGTGAAAGAGAAAGTAATGTTGAAGGGGAGGGGTTGTCAGATCAGAGACTGTTTTCTTGTGTTACGTGTGGAATTTTGAGCTTTGCTTGTGTTGCTATTATTCAACCAACAGAAGAAGCAGCCAGATATCTTATGTCGGCAGATTGTAGCTTTTTCAATGATTGGGTTGTTGGATCTGGATTGGCTAGTGAGGTGTTCCCGGTTGCAACTGGAGATCCAATTACTTCAAAAAATGCTCCTTGCACAGGATTGGAGGAATACAATGCCCCTGCTGGTTTATATGACGTGCTTGTTCAATCTGGTGATTGTCAAATTCAGGTGGTTGATCAAGGTAATGAAGTGGTTTCAAATACTGAAATGCCGAGAGAGACTTCAGCTCTTGGGCTGGTAGCTTTGAATTATGGAAATTCATCTGACTCGGAGGAAGATCAGGTTGAACCAGATGTTCCTGTCTGTTCTGATGAACCGAACATGACAAACTGCTCTTTGGAAAGTAGATATAGAGACCAGAGTGCTAGTCCTCCTTGGAGAAACCCTTATGCTGGTACAAGTGGGGCTCACAGTCCCTCGTCACAAGGATCTGGTTGTGAGAATGAACTTCATCTCCAAACTTTTGATCACTATGCGACAGATGGACGAAAAATAGCTAATTTCAAGGATAGCAGCCTTCAAAACTTTGACTGCTCTGCTGATTTCAAAACTAATAATTCTGCTTCCACAGCAACAGGATTTGGTAAGGCTATCGTACCAATACAGAAAAAAAGTATGTCATTTCATCCAGGATGCGACGAAGACTCTTCTAGAATGCATGTATTCTGCCTTGAGCATGCTGTAGAGGTTGAGCAGCAGCTTCGTTCAATTGGCGGTGTCCATATATTGCTCCTTTGTCATCCAGACTACCCCAGGATAGAGGATGAAGCAAAATCTATGGCAGAAGAACTGGGAATAAGTTATCTCTGGAATGATATGGCATTCATGAATGCCGCCAAGGAAGATGAGACAAGGATTCAGTTAGCTCTGGATAGCGAGGAGGCCATTGCTGGGAACGGGGACTGGGCTGTAAAGTTGGGGATCGATCTCTTCTACAGTGCCAGCCTTAGCCGCTCTCATCTTTATAGTAAGCAGATGCCATACAATTCTGTTATATACAAAGCATTTGGCCGGAGCTCTCCCGCTAGTTCGCCCACAAGAATTGATGCCTATGGGAGGAGAGGTGGCAAGCCAAAAAAGGTAGTGGCTGGGAAATGGTGTGGTAAAGTGTGGATGTCAAACCAAGTTCATTCTTTTCTAGTAAAAAGGGATCCCGAGGAAGAAGTAGAAGTAGCAGAAGATGAAGAAGAGCGGACCTTCCGTGCTTGGGCAATGCCAGATGAGGATCATGAGGTCAAATCAGAAATCACATGCAAAACTGAGAAGACGGTTAAGAAGTATGCTAGGAAGAGGAAAATGACTGCTGATACTCGAACAACCAAGAAAGCTAGATGTTTTGATAAAGAAGATGCAGTTTCAGATTATTCAGTAGATGATAACTCTCCTCAGCAGCAAAGGAGGCTTCCTAACAGCAAGCAAGCCAAACATACTGAGAGTGGCCGAACCAAGAAACCCAAGCATGTTGAGACAGAAGATGCAGTTTCAGATGATTCAATGCAAGATGATGATTCTCTTCAGCAAAATGGGAGGTTTCTTCACAGCGAGCAAGTCAAGTATATTGAGAGAAGTGACGTTTCAGATGATTCAATGGGAGTTGAATCTCATCAGCAGCATAAGAGAACTGCTAAAAGTAAGCAATTCAAACCTGTGGAAACAGATGTGGTTTCAGATGATTCGTTTGAGGGTAGTTCTCATCAGCCGCAGAGAGTCCTTAGAAGCAAGACAACTAAATGCACTGGGAGAGAAAATTTGATTTCAGAGGATGTTCACGGGTTCGGTTCTCATCAACAACGAAGGAGCATTTCTAGAAGCAAGCAGGCCAGAGCCAGATTCATTGAGAGAGAAGATACCGCTCTGGATGAAACACCGGAAGATAATTTTCAGCAGCATAAGAGGATTCTTCAAAACAAGCAAACCAAACCAGAGACCCGTGGGAAAATGAGACAAGAAACCCCTCGCCAAGTGAAACAAGGGACCGCTCCTCTTGTGAAACAAGGTACCCGCACTCCAAGAAATCAACAAACCCCTCAGCAAACAAAGAAGCAGACACCTAGGCTCCGAAATAATCAGTCTGAGCAGAACAGCTTTGATTTATATGCTGAAGAGGAGACAGAAGGTGGGCCTAGCACGCGCCTTAGAAAAAGAGCTCCTAAGCCCTCGAAAGTCCCTGGAACCAAACCAAAAGAGCAGCAACAGACTGCTAGGAAAAAGGCAAAGAATGCTTCAGCCGGGAAAGCTCAGGGTGGCCGAAATGAAACAAAATTGAAGGAAGAGGATGCAGAATTCGTATGTGATTTTGAAGGTTGTACCATGAGTTTTGCCTCAAGACATGATCTTTCCCTCCACAAAAGAAACATATGTCCAGTCAAGGGGTGTGGAAAGAAATTCTTCTCGCATAAGTATCTGGTACAGCATCGTCGTGTTCACACAGATGATCGCCCCCTTCGATGCCCTTGGAAGGGCTGCAAGATGACATTCAAGTGGGCATGGGCTCGCACTGAGCACATTAGGGTTCACACAGGTGCTCGTCCGTATGTATGCGCTGAGCCAGGGTGTGCACAGACCTTTCGATTTGTGTCAGATTTCAGCCGTCACAAGCGCAAGACCGGGCATTCGGTGAAGAAGAGTAAGAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006325 GO:0006464 GO:0006482 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008214 GO:0009653 GO:0009719 GO:0009725 GO:0009741 GO:0009791 GO:0009826 GO:0009892 GO:0009987 GO:0010033 GO:0010228 GO:0010605 GO:0010639 GO:0014070 GO:0016043 GO:0016049 GO:0016569 GO:0016570 GO:0016577 GO:0019222 GO:0019538 GO:0022414 GO:0031056 GO:0031057 GO:0031323 GO:0031324 GO:0031399 GO:0031400 GO:0032268 GO:0032269 GO:0032501 GO:0032502 GO:0032989 GO:0033043 GO:0033044 GO:0033169 GO:0033993 GO:0035065 GO:0035067 GO:0036211 GO:0040007 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048366 GO:0048367 GO:0048519 GO:0048523 GO:0048589 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051129 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0051276 GO:0060255 GO:0060560 GO:0061458 GO:0065007 GO:0070076 GO:0070988 GO:0071704 GO:0071840 GO:0080090 GO:0099402 GO:1901564 GO:1901700 GO:1901983 GO:1901984 GO:1902275 GO:1905268 GO:2000756 GO:2000757 GO:2001251

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

JmjC JmjN zf-C2H2

Protein Analysis

1105

Amino Acids

123.76

Weight (kDa)

8.58

Isoelectric Point (pI)

60.06

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011462)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48430 AT3G48430
fragaria_vesca	FvH4_5g07090 FvH4_5g07090 FvH4_5g07090
malus_domestica	MD06G1159300.v1.1 MD14G1165600.v1.1
prunus_persica	Prupe.5G159200_v2.0.a1
pyrus_communis	pycom06g14210 pycom14g13810
rosa_chinensis	RchiOBHm_Chr7g0191461
rosa_laevigata	RLG00000004448
rosa_multiflora	Rmu_sc0002661.1_g000009
rosa_roxburghii	Rroxscaffold_157G00438400 Rroxscaffold_3G00263790
rosa_rugosa	Rorug06G0510400
rosa_samantha	Rh7AG118500 Rh7BG120500 Rh7CG123300 Rh7DG121400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	219, 397
Acc65I	GGTACC	1 cut(s)	2675
AccB1I	GGYRCC	1 cut(s)	2675
AccBSI	CCGCTC	4 cut(s)	1632, 1870, 2531, 2657
AccII	CGCG	2 cut(s)	498, 2809
AclWI	GGATC	8 cut(s)	490, 709, 737, 1114, 1607, 1823, 1836, 1911
AcoI	YGGCCR	3 cut(s)	1687, 2116, 2923
AcsI	RAATTY	7 cut(s)	505, 600, 840, 934, 2425, 2960, 3062
AcuI	CTGAAG	5 cut(s)	249, 885, 2177, 2799, 2886
AfaI	GTAC	7 cut(s)	186, 495, 1075, 1275, 2677, 2986, 3087
AfiI	CCNNNNNNNGG	8 cut(s)	773, 1070, 1569, 1734, 1885, 3047, 3136, 3137
AflIII	ACRYGT	2 cut(s)	292, 593
AjiI	CACGTC	1 cut(s)	814
AjnI	CCWGG	6 cut(s)	319, 330, 1306, 1430, 2845, 3226
AleI	CACNNNNGTG	1 cut(s)	3198
AloI	GAACNNNNNNTCC	2 cut(s)	1116, 1148
Alw21I	GWGCWC	5 cut(s)	1697, 2827, 3183, 3205, 3238
Alw44I	GTGCAC	1 cut(s)	3234
AlwI	GGATC	8 cut(s)	490, 709, 737, 1114, 1607, 1823, 1836, 1911
AlwNI	CAGNNNCTG	2 cut(s)	380, 577
Ama87I	CYCGRG	1 cut(s)	1832
AoxI	GGCC	7 cut(s)	499, 1560, 1687, 2116, 2496, 2798, 2923
ApaLI	GTGCAC	1 cut(s)	3234
ApoI	RAATTY	7 cut(s)	505, 600, 840, 934, 2425, 2960, 3062
ArsI	GACNNNNNNTTYG	2 cut(s)	3274, 3306
Asp700I	GAANNNNTTC	2 cut(s)	97, 3065
Asp718I	GGTACC	1 cut(s)	2675
AspA2I	CCTAGG	1 cut(s)	2729
AspLEI	GCGC	3 cut(s)	2811, 3221, 3279
AspS9I	GGNCC	3 cut(s)	1872, 2652, 2798
AsuC2I	CCSGG	3 cut(s)	728, 2908, 3286
AsuHPI	GGTGA	3 cut(s)	228, 842, 3307
AsuII	TTCGAA	1 cut(s)	509
AvaI	CYCGRG	1 cut(s)	1832
AvaII	GGWCC	2 cut(s)	1872, 2652
AvrII	CCTAGG	1 cut(s)	2729
AxyI	CCTNAGG	1 cut(s)	367
BaeGI	GKGCMC	1 cut(s)	3238
BamHI	GGATCC	1 cut(s)	1828
BanI	GGYRCC	1 cut(s)	2675
BanII	GRGCYC	4 cut(s)	1087, 1697, 2827, 3172
BbsI	GAAGAC	2 cut(s)	1326, 1949
Bbv12I	GWGCWC	5 cut(s)	1697, 2827, 3183, 3205, 3238
BbvCI	CCTCAGC	2 cut(s)	2064, 2706
BccI	CCATC	3 cut(s)	33, 377, 1154
BceAI	ACGGC	1 cut(s)	3252
BcgI	CGANNNNNNTGC	2 cut(s)	1361, 1395
BciT130I	CCWGG	6 cut(s)	321, 332, 1308, 1432, 2847, 3228
BclI	TGATCA	2 cut(s)	853, 1144
BcnI	CCSGG	3 cut(s)	728, 2908, 3286
BfmI	CTRYAG	2 cut(s)	1359, 1612
BfuAI	ACCTGC	2 cut(s)	219, 397
BlnI	CCTAGG	1 cut(s)	2729
BlpI	GCTNAGC	1 cut(s)	3222
Bme1390I	CCNGG	9 cut(s)	321, 332, 728, 1308, 1432, 2847, 2908, 3228, 3286
Bme18I	GGWCC	2 cut(s)	1872, 2652
BmeT110I	CYCGRG	1 cut(s)	1832
BmgBI	CACGTC	1 cut(s)	814
BmgT120I	GGNCC	3 cut(s)	1872, 2652, 2798
BmiI	GGNNCC	5 cut(s)	1830, 2653, 2677, 2735, 2851
BmrFI	CCNGG	9 cut(s)	321, 332, 728, 1308, 1432, 2847, 2908, 3228, 3286
BmrI	ACTGGG	3 cut(s)	1478, 1591, 2424
BmsI	GCATC	9 cut(s)	452, 1301, 1644, 1714, 2017, 2143, 2944, 3100, 3116
BmuI	ACTGGG	3 cut(s)	1478, 1591, 2424
BoxI	GACNNNNGTC	1 cut(s)	18
BpiI	GAAGAC	2 cut(s)	1326, 1949
BpmI	CTGGAG	1 cut(s)	759
Bpu10I	CCTNAGC	5 cut(s)	1625, 2064, 2706, 2829, 2916
Bpu1102I	GCTNAGC	1 cut(s)	3222
Bpu14I	TTCGAA	1 cut(s)	509
BpuEI	CTTGAG	2 cut(s)	1370, 2986
BpuMI	CCSGG	3 cut(s)	728, 2908, 3286
Bsa29I	ATCGAT	2 cut(s)	66, 1602
BsaAI	YACGTR	2 cut(s)	293, 594
BsaBI	GATNNNNATC	1 cut(s)	1902
BsaI	GGTCTC	3 cut(s)	392, 1026, 2597
BsaWI	WCCGGW	1 cut(s)	2545
Bsc4I	CCNNNNNNNGG	8 cut(s)	773, 1070, 1569, 1734, 1885, 3047, 3136, 3137
Bse1I	ACTGG	5 cut(s)	742, 1473, 1586, 2419, 3041
Bse21I	CCTNAGG	1 cut(s)	367
Bse3DI	GCAATG	2 cut(s)	1563, 1896
Bse8I	GATNNNNATC	1 cut(s)	1902
BseBI	CCWGG	6 cut(s)	321, 332, 1308, 1432, 2847, 3228
BseCI	ATCGAT	2 cut(s)	66, 1602
BseGI	GGATG	9 cut(s)	196, 1303, 1316, 1417, 1447, 1797, 2446, 2542, 2959
BseJI	GATNNNNATC	1 cut(s)	1902
BseLI	CCNNNNNNNGG	8 cut(s)	773, 1070, 1569, 1734, 1885, 3047, 3136, 3137
BseMI	GCAATG	2 cut(s)	1563, 1896
BseNI	ACTGG	5 cut(s)	742, 1473, 1586, 2419, 3041
BseRI	GAGGAG	5 cut(s)	1571, 1750, 2052, 2649, 2798
BseSI	GKGCMC	1 cut(s)	3238
BseYI	CCCAGC	2 cut(s)	1568, 1766
Bsh1236I	CGCG	2 cut(s)	498, 2809
BshFI	GGCC	7 cut(s)	501, 1562, 1689, 2118, 2498, 2800, 2925
BshNI	GGYRCC	1 cut(s)	2675
BshVI	ATCGAT	2 cut(s)	66, 1602
BsiHKAI	GWGCWC	5 cut(s)	1697, 2827, 3183, 3205, 3238
BsiHKCI	CYCGRG	1 cut(s)	1832
BsiSI	CCGG	5 cut(s)	728, 1690, 2546, 2907, 3285
BslFI	GGGAC	4 cut(s)	1077, 1592, 2665, 2828
BslI	CCNNNNNNNGG	8 cut(s)	773, 1070, 1569, 1734, 1885, 3047, 3136, 3137
BsmFI	GGGAC	4 cut(s)	1077, 1592, 2665, 2828
BsmI	GAATGC	6 cut(s)	99, 1338, 1499, 1513, 2902, 3289
BsnI	GGCC	7 cut(s)	501, 1562, 1689, 2118, 2498, 2800, 2925
Bso31I	GGTCTC	3 cut(s)	392, 1026, 2597
BsoBI	CYCGRG	1 cut(s)	1832
Bsp119I	TTCGAA	1 cut(s)	509
Bsp1286I	GDGCHC	7 cut(s)	1087, 1697, 2827, 3172, 3183, 3205, 3238
Bsp1407I	TGTACA	1 cut(s)	184
Bsp1720I	GCTNAGC	1 cut(s)	3222
BspANI	GGCC	7 cut(s)	501, 1562, 1689, 2118, 2498, 2800, 2925
BspDI	ATCGAT	2 cut(s)	66, 1602
BspFNI	CGCG	2 cut(s)	498, 2809
BspHI	TCATGA	3 cut(s)	390, 1503, 1906
BspLI	GGNNCC	5 cut(s)	1830, 2653, 2677, 2735, 2851
BspMI	ACCTGC	2 cut(s)	219, 397
BspPI	GGATC	8 cut(s)	490, 709, 737, 1114, 1607, 1823, 1836, 1911
BspQI	GCTCTTC	1 cut(s)	1860
BspT104I	TTCGAA	1 cut(s)	509
BspT107I	GGYRCC	1 cut(s)	2675
BspTNI	GGTCTC	3 cut(s)	392, 1026, 2597
BsrBI	CCGCTC	4 cut(s)	1632, 1870, 2531, 2657
BsrDI	GCAATG	2 cut(s)	1563, 1896
BsrGI	TGTACA	1 cut(s)	184
BsrI	ACTGG	5 cut(s)	742, 1473, 1586, 2419, 3041
BssT1I	CCWWGG	4 cut(s)	1052, 1515, 2729, 3131
Bst2UI	CCWGG	6 cut(s)	321, 332, 1308, 1432, 2847, 3228
Bst4CI	ACNGT	7 cut(s)	306, 344, 530, 579, 1091, 1616, 1948
Bst6I	CTCTTC	9 cut(s)	506, 1330, 1613, 1860, 1961, 2196, 2775, 2943, 3296
BstAPI	GCANNNNNTGC	1 cut(s)	2897
BstAUI	TGTACA	1 cut(s)	184
BstBAI	YACGTR	2 cut(s)	293, 594
BstBI	TTCGAA	1 cut(s)	509
BstDSI	CCRYGG	2 cut(s)	119, 2608
BstEII	GGTNACC	1 cut(s)	234
BstENI	CCTNNNNNAGG	2 cut(s)	771, 1732
BstF5I	GGATG	9 cut(s)	196, 1303, 1316, 1417, 1447, 1797, 2446, 2542, 2959
BstFNI	CGCG	2 cut(s)	498, 2809
BstHHI	GCGC	3 cut(s)	2811, 3221, 3279
BstMWI	GCNNNNNNNGC	7 cut(s)	620, 1247, 1629, 2077, 2806, 2897, 2912
BstNI	CCWGG	6 cut(s)	321, 332, 1308, 1432, 2847, 3228
BstNSI	RCATGY	4 cut(s)	1340, 1358, 1932, 2141
BstPAI	GACNNNNGTC	1 cut(s)	18
BstPI	GGTNACC	1 cut(s)	234
BstSCI	CCNGG	9 cut(s)	319, 330, 726, 1306, 1430, 2845, 2906, 3226, 3284
BstSFI	CTRYAG	2 cut(s)	1359, 1612
BstSLI	GKGCMC	1 cut(s)	3238
BstUI	CGCG	2 cut(s)	498, 2809
BstV2I	GAAGAC	2 cut(s)	1326, 1949
BstX2I	RGATCY	5 cut(s)	482, 701, 742, 1106, 1828
BstYI	RGATCY	5 cut(s)	482, 701, 742, 1106, 1828
Bsu15I	ATCGAT	2 cut(s)	66, 1602
Bsu36I	CCTNAGG	1 cut(s)	367
BsuRI	GGCC	7 cut(s)	501, 1562, 1689, 2118, 2498, 2800, 2925
BsuTUI	ATCGAT	2 cut(s)	66, 1602
BtgI	CCRYGG	2 cut(s)	119, 2608
BtrI	CACGTC	1 cut(s)	814
BtsCI	GGATG	9 cut(s)	196, 1303, 1316, 1417, 1447, 1797, 2446, 2542, 2959
BtsIMutI	CAGTG	4 cut(s)	432, 1621, 2412, 3174
BveI	ACCTGC	2 cut(s)	219, 397
CaiI	CAGNNNCTG	2 cut(s)	380, 577
CciI	TCATGA	3 cut(s)	390, 1503, 1906
CfoI	GCGC	3 cut(s)	2811, 3221, 3279
Cfr13I	GGNCC	3 cut(s)	1872, 2652, 2798
ClaI	ATCGAT	2 cut(s)	66, 1602
CseI	GACGC	1 cut(s)	8
Csp6I	GTAC	7 cut(s)	185, 494, 1074, 1274, 2676, 2985, 3086
CspCI	CAANNNNNGTGG	4 cut(s)	1702, 1737, 3034, 3069
CviQI	GTAC	7 cut(s)	185, 494, 1074, 1274, 2676, 2985, 3086
EaeI	YGGCCR	3 cut(s)	1687, 2116, 2923
Eam1104I	CTCTTC	9 cut(s)	506, 1330, 1613, 1860, 1961, 2196, 2775, 2943, 3296
EarI	CTCTTC	9 cut(s)	506, 1330, 1613, 1860, 1961, 2196, 2775, 2943, 3296
Ecl136II	GAGCTC	2 cut(s)	1695, 2825
Eco130I	CCWWGG	4 cut(s)	1052, 1515, 2729, 3131
Eco24I	GRGCYC	4 cut(s)	1087, 1697, 2827, 3172
Eco31I	GGTCTC	3 cut(s)	392, 1026, 2597
Eco32I	GATATC	1 cut(s)	656
Eco47I	GGWCC	2 cut(s)	1872, 2652
Eco53kI	GAGCTC	2 cut(s)	1695, 2825
Eco57I	CTGAAG	5 cut(s)	249, 885, 2177, 2799, 2886
Eco81I	CCTNAGG	1 cut(s)	367
Eco88I	CYCGRG	1 cut(s)	1832
Eco91I	GGTNACC	1 cut(s)	234
EcoICRI	GAGCTC	2 cut(s)	1695, 2825
EcoNI	CCTNNNNNAGG	2 cut(s)	771, 1732
EcoO65I	GGTNACC	1 cut(s)	234
EcoRI	GAATTC	2 cut(s)	505, 2960
EcoRII	CCWGG	6 cut(s)	319, 330, 1306, 1430, 2845, 3226
EcoRV	GATATC	1 cut(s)	656
EcoT14I	CCWWGG	4 cut(s)	1052, 1515, 2729, 3131
EcoT22I	ATGCAT	1 cut(s)	1338
EcoT38I	GRGCYC	4 cut(s)	1087, 1697, 2827, 3172
ErhI	CCWWGG	4 cut(s)	1052, 1515, 2729, 3131
FalI	AAGNNNNNCTT	4 cut(s)	82, 114, 3050, 3082
FaqI	GGGAC	4 cut(s)	1077, 1592, 2665, 2828
FauI	CCCGC	2 cut(s)	1708, 2687
FauNDI	CATATG	1 cut(s)	3035
FbaI	TGATCA	2 cut(s)	853, 1144
FokI	GGATG	9 cut(s)	203, 1290, 1323, 1404, 1454, 1804, 2453, 2549, 2966
FriOI	GRGCYC	4 cut(s)	1087, 1697, 2827, 3172
GlaI	GCGC	3 cut(s)	2810, 3220, 3278
GsaI	CCCAGC	2 cut(s)	1572, 1770
GsuI	CTGGAG	1 cut(s)	759
HaeIII	GGCC	7 cut(s)	501, 1562, 1689, 2118, 2498, 2800, 2925
HapII	CCGG	5 cut(s)	728, 1690, 2546, 2907, 3285
HgaI	GACGC	1 cut(s)	8
HhaI	GCGC	3 cut(s)	2811, 3221, 3279
Hin6I	GCGC	3 cut(s)	2809, 3219, 3277
HinP1I	GCGC	3 cut(s)	2809, 3219, 3277
HpaII	CCGG	5 cut(s)	728, 1690, 2546, 2907, 3285
HphI	GGTGA	3 cut(s)	228, 842, 3307
Hpy166II	GTNNAC	7 cut(s)	302, 316, 338, 2446, 3103, 3193, 3236
Hpy8I	GTNNAC	7 cut(s)	302, 316, 338, 2446, 3103, 3193, 3236
Hpy99I	CGWCG	3 cut(s)	17, 1319, 3099
HpyCH4III	ACNGT	7 cut(s)	306, 344, 530, 579, 1091, 1616, 1948
HpyCH4IV	ACGT	4 cut(s)	292, 593, 813, 2250
HpyF10VI	GCNNNNNNNGC	7 cut(s)	620, 1247, 1629, 2077, 2806, 2897, 2912
HpySE526I	ACGT	4 cut(s)	292, 593, 813, 2250
HspAI	GCGC	3 cut(s)	2809, 3219, 3277
KpnI	GGTACC	1 cut(s)	2679
Ksp22I	TGATCA	2 cut(s)	853, 1144
LguI	GCTCTTC	1 cut(s)	1860
LmnI	GCTCC	7 cut(s)	769, 1413, 1692, 2475, 2662, 2739, 2830
LweI	GCATC	9 cut(s)	452, 1301, 1644, 1714, 2017, 2143, 2944, 3100, 3116
MaeII	ACGT	4 cut(s)	292, 593, 813, 2250
MaeIII	GTNAC	5 cut(s)	234, 589, 1098, 2246, 3269
MbiI	CCGCTC	4 cut(s)	1632, 1870, 2531, 2657
MfeI	CAATTG	2 cut(s)	240, 1386
MflI	RGATCY	5 cut(s)	482, 701, 742, 1106, 1828
MhlI	GDGCHC	7 cut(s)	1087, 1697, 2827, 3172, 3183, 3205, 3238
MlyI	GAGTC	3 cut(s)	938, 1316, 2394
MmeI	TCCRAC	1 cut(s)	679
Mph1103I	ATGCAT	1 cut(s)	1338
MroXI	GAANNNNTTC	2 cut(s)	97, 3065
MseI	TTAA	5 cut(s)	171, 216, 411, 476, 1950
MslI	CAYNNNNRTG	4 cut(s)	3096, 3108, 3157, 3198
MspI	CCGG	5 cut(s)	728, 1690, 2546, 2907, 3285
MspR9I	CCNGG	9 cut(s)	321, 332, 728, 1308, 1432, 2847, 2908, 3228, 3286
MunI	CAATTG	2 cut(s)	240, 1386
Mva1269I	GAATGC	6 cut(s)	99, 1338, 1499, 1513, 2902, 3289
MvaI	CCWGG	6 cut(s)	321, 332, 1308, 1432, 2847, 3228
MvnI	CGCG	2 cut(s)	498, 2809
MwoI	GCNNNNNNNGC	7 cut(s)	620, 1247, 1629, 2077, 2806, 2897, 2912
NciI	CCSGG	3 cut(s)	728, 2908, 3286
NdeI	CATATG	1 cut(s)	3035
NlaIV	GGNNCC	5 cut(s)	1830, 2653, 2677, 2735, 2851
NmeAIII	GCCGAG	1 cut(s)	915
NmuCI	GTSAC	4 cut(s)	234, 1098, 2246, 3269
NsiI	ATGCAT	1 cut(s)	1338
NspI	RCATGY	4 cut(s)	1340, 1358, 1932, 2141
NspV	TTCGAA	1 cut(s)	509
OliI	CACNNNNGTG	1 cut(s)	3198
PaeI	GCATGC	1 cut(s)	1358
PagI	TCATGA	3 cut(s)	390, 1503, 1906
PasI	CCCWGGG	1 cut(s)	331
PciSI	GCTCTTC	1 cut(s)	1860
PcsI	WCGNNNNNNNCGW	2 cut(s)	127, 3121
PctI	GAATGC	6 cut(s)	99, 1338, 1499, 1513, 2902, 3289
PdmI	GAANNNNTTC	2 cut(s)	97, 3065
PfeI	GAWTC	8 cut(s)	1534, 2168, 2186, 2261, 2276, 2351, 2508, 2575
PfoI	TCCNGGA	1 cut(s)	1306
PleI	GAGTC	3 cut(s)	938, 1316, 2393
PpsI	GAGTC	3 cut(s)	938, 1316, 2393
Ppu21I	YACGTR	2 cut(s)	293, 594
PshAI	GACNNNNGTC	1 cut(s)	18
Psp124BI	GAGCTC	2 cut(s)	1697, 2827
Psp6I	CCWGG	6 cut(s)	319, 330, 1306, 1430, 2845, 3226
PspEI	GGTNACC	1 cut(s)	234
PspFI	CCCAGC	2 cut(s)	1568, 1766
PspGI	CCWGG	6 cut(s)	319, 330, 1306, 1430, 2845, 3226
PspN4I	GGNNCC	5 cut(s)	1830, 2653, 2677, 2735, 2851
PspPI	GGNCC	3 cut(s)	1872, 2652, 2798
PstNI	CAGNNNCTG	2 cut(s)	380, 577
PsuI	RGATCY	5 cut(s)	482, 701, 742, 1106, 1828
RsaI	GTAC	7 cut(s)	186, 495, 1075, 1275, 2677, 2986, 3087
RsaNI	GTAC	7 cut(s)	185, 494, 1074, 1274, 2676, 2985, 3086
RseI	CAYNNNNRTG	4 cut(s)	3096, 3108, 3157, 3198
SacI	GAGCTC	2 cut(s)	1697, 2827
SapI	GCTCTTC	1 cut(s)	1860
SaqAI	TTAA	5 cut(s)	171, 216, 411, 476, 1950
Sau96I	GGNCC	3 cut(s)	1872, 2652, 2798
SchI	GAGTC	3 cut(s)	938, 1316, 2394
ScrFI	CCNGG	9 cut(s)	321, 332, 728, 1308, 1432, 2847, 2908, 3228, 3286
SduI	GDGCHC	7 cut(s)	1087, 1697, 2827, 3172, 3183, 3205, 3238
SfaNI	GCATC	9 cut(s)	452, 1301, 1644, 1714, 2017, 2143, 2944, 3100, 3116
SfcI	CTRYAG	2 cut(s)	1359, 1612
SfuI	TTCGAA	1 cut(s)	509
SinI	GGWCC	2 cut(s)	1872, 2652
SmiMI	CAYNNNNRTG	4 cut(s)	3096, 3108, 3157, 3198
SmlI	CTYRAG	2 cut(s)	1349, 3001
SmoI	CTYRAG	2 cut(s)	1349, 3001
SphI	GCATGC	1 cut(s)	1358
SstI	GAGCTC	2 cut(s)	1697, 2827
StyD4I	CCNGG	9 cut(s)	319, 330, 726, 1306, 1430, 2845, 2906, 3226, 3284
StyI	CCWWGG	4 cut(s)	1052, 1515, 2729, 3131
TaaI	ACNGT	7 cut(s)	306, 344, 530, 579, 1091, 1616, 1948
TaiI	ACGT	4 cut(s)	295, 596, 816, 2253
TaqI	TCGA	9 cut(s)	12, 66, 130, 509, 1602, 1990, 2837, 3124, 3247
TatI	WGTACW	1 cut(s)	184
TauI	GCSGC	4 cut(s)	501, 1514, 1632, 2380
TfiI	GAWTC	8 cut(s)	1534, 2168, 2186, 2261, 2276, 2351, 2508, 2575
Tru1I	TTAA	5 cut(s)	171, 216, 411, 476, 1950
Tru9I	TTAA	5 cut(s)	171, 216, 411, 476, 1950
TscAI	CASTG	4 cut(s)	432, 1621, 2419, 3181
TseFI	GTSAC	4 cut(s)	234, 1098, 2246, 3269
Tsp45I	GTSAC	4 cut(s)	234, 1098, 2246, 3269
TspGWI	ACGGA	3 cut(s)	136, 1868, 3198
TspRI	CASTG	4 cut(s)	432, 1621, 2419, 3181
VneI	GTGCAC	1 cut(s)	3234
VpaK11BI	GGWCC	2 cut(s)	1872, 2652
XagI	CCTNNNNNAGG	2 cut(s)	771, 1732
XapI	RAATTY	7 cut(s)	505, 600, 840, 934, 2425, 2960, 3062
XbaI	TCTAGA	2 cut(s)	1328, 2483
XceI	RCATGY	4 cut(s)	1340, 1358, 1932, 2141
XmaJI	CCTAGG	1 cut(s)	2729
XmnI	GAANNNNTTC	2 cut(s)	97, 3065
Zsp2I	ATGCAT	1 cut(s)	1338

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.