Transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G40740 AT2G40740 AT2G40740 AT3G56390 |
| fragaria_vesca | FvH4_7g26020 |
| malus_domestica | MD01G1168500.v1.1 MD07G1234600.v1.1 |
| prunus_persica | Prupe.2G264900_v2.0.a1 |
| pyrus_communis | pycom01g18150 pycom07g21220 |
| rosa_chinensis | RchiOBHm_Chr1g0372431 |
| rosa_laevigata | RLG00000026899 |
| rosa_multiflora | Rmu_sc0001755.1_g000002 |
| rosa_roxburghii | Rroxscaffold_4G00284930 |
| rosa_rugosa | Rorug01G0371800 |
| rosa_samantha | Rh1AG380300 Rh1BG343900 Rh1CG357300 Rh1DG375100 |
| rosa_wichuraiana | Rw1G033440 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 141 |
| AccBSI | CCGCTC | 1 cut(s) | 148 |
| AciI | CCGC | 1 cut(s) | 148 |
| AcyI | GRCGYC | 1 cut(s) | 138 |
| AfaI | GTAC | 1 cut(s) | 191 |
| AgeI | ACCGGT | 1 cut(s) | 208 |
| AgsI | TTSAA | 1 cut(s) | 31 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 44, 76 |
| AluBI | AGCT | 2 cut(s) | 55, 114 |
| AluI | AGCT | 2 cut(s) | 55, 114 |
| Alw26I | GTCTC | 1 cut(s) | 129 |
| AseI | ATTAAT | 1 cut(s) | 14 |
| AsiGI | ACCGGT | 1 cut(s) | 208 |
| AsuHPI | GGTGA | 1 cut(s) | 75 |
| BcoDI | GTCTC | 1 cut(s) | 129 |
| BfaI | CTAG | 1 cut(s) | 164 |
| BisI | GCNGC | 1 cut(s) | 149 |
| BlsI | GCNGC | 1 cut(s) | 150 |
| BmiI | GGNNCC | 1 cut(s) | 207 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 163, 195 |
| BpuEI | CTTGAG | 1 cut(s) | 77 |
| BsaHI | GRCGYC | 1 cut(s) | 138 |
| BsaWI | WCCGGW | 2 cut(s) | 202, 208 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 44, 74 |
| Bse118I | RCCGGY | 1 cut(s) | 208 |
| BseRI | GAGGAG | 1 cut(s) | 20 |
| BshTI | ACCGGT | 1 cut(s) | 208 |
| BsiSI | CCGG | 2 cut(s) | 203, 209 |
| BsmAI | GTCTC | 1 cut(s) | 129 |
| BsmBI | CGTCTC | 1 cut(s) | 129 |
| BspACI | CCGC | 1 cut(s) | 148 |
| BspLI | GGNNCC | 1 cut(s) | 207 |
| BsrBI | CCGCTC | 1 cut(s) | 148 |
| BsrFI | RCCGGY | 1 cut(s) | 208 |
| BssAI | RCCGGY | 1 cut(s) | 208 |
| BssNI | GRCGYC | 1 cut(s) | 138 |
| Bst4CI | ACNGT | 1 cut(s) | 189 |
| BstACI | GRCGYC | 1 cut(s) | 138 |
| BstDEI | CTNAG | 1 cut(s) | 110 |
| BstMAI | GTCTC | 1 cut(s) | 129 |
| Cfr10I | RCCGGY | 1 cut(s) | 208 |
| Csp6I | GTAC | 1 cut(s) | 190 |
| CspAI | ACCGGT | 1 cut(s) | 208 |
| CviJI | RGCY | 4 cut(s) | 55, 114, 151, 196 |
| CviKI_1 | RGCY | 4 cut(s) | 55, 114, 151, 196 |
| CviQI | GTAC | 1 cut(s) | 190 |
| DdeI | CTNAG | 1 cut(s) | 110 |
| Eco32I | GATATC | 1 cut(s) | 120 |
| EcoRV | GATATC | 1 cut(s) | 120 |
| Esp3I | CGTCTC | 1 cut(s) | 129 |
| FaiI | YATR | 1 cut(s) | 227 |
| Fnu4HI | GCNGC | 1 cut(s) | 149 |
| Fsp4HI | GCNGC | 1 cut(s) | 149 |
| FspBI | CTAG | 1 cut(s) | 164 |
| GluI | GCNGC | 1 cut(s) | 149 |
| HapII | CCGG | 2 cut(s) | 203, 209 |
| Hin1I | GRCGYC | 1 cut(s) | 138 |
| HincII | GTYRAC | 1 cut(s) | 142 |
| HindII | GTYRAC | 1 cut(s) | 142 |
| HinfI | GANTC | 3 cut(s) | 36, 80, 89 |
| HpaII | CCGG | 2 cut(s) | 203, 209 |
| HphI | GGTGA | 1 cut(s) | 75 |
| Hpy166II | GTNNAC | 1 cut(s) | 142 |
| Hpy188I | TCNGA | 2 cut(s) | 94, 134 |
| Hpy8I | GTNNAC | 1 cut(s) | 142 |
| HpyCH4III | ACNGT | 1 cut(s) | 189 |
| HpyCH4IV | ACGT | 1 cut(s) | 138 |
| HpyF3I | CTNAG | 1 cut(s) | 110 |
| HpySE526I | ACGT | 1 cut(s) | 138 |
| Hsp92I | GRCGYC | 1 cut(s) | 138 |
| LmnI | GCTCC | 1 cut(s) | 52 |
| LpnPI | CCDG | 6 cut(s) | 29, 99, 206, 210, 216, 222 |
| MaeI | CTAG | 1 cut(s) | 164 |
| MaeII | ACGT | 1 cut(s) | 138 |
| MaeIII | GTNAC | 2 cut(s) | 81, 183 |
| MbiI | CCGCTC | 1 cut(s) | 148 |
| MluCI | AATT | 1 cut(s) | 232 |
| MlyI | GAGTC | 1 cut(s) | 89 |
| MmeI | TCCRAC | 1 cut(s) | 201 |
| MnlI | CCTC | 1 cut(s) | 165 |
| MseI | TTAA | 2 cut(s) | 14, 215 |
| MspI | CCGG | 2 cut(s) | 203, 209 |
| NlaIV | GGNNCC | 1 cut(s) | 207 |
| NmuCI | GTSAC | 2 cut(s) | 81, 183 |
| PfeI | GAWTC | 2 cut(s) | 36, 89 |
| PinAI | ACCGGT | 1 cut(s) | 208 |
| PkrI | GCNGC | 1 cut(s) | 150 |
| PleI | GAGTC | 1 cut(s) | 88 |
| PpsI | GAGTC | 1 cut(s) | 88 |
| PshBI | ATTAAT | 1 cut(s) | 14 |
| PspN4I | GGNNCC | 1 cut(s) | 207 |
| RsaI | GTAC | 1 cut(s) | 191 |
| RsaNI | GTAC | 1 cut(s) | 190 |
| SaqAI | TTAA | 2 cut(s) | 14, 215 |
| SatI | GCNGC | 1 cut(s) | 149 |
| SchI | GAGTC | 1 cut(s) | 89 |
| SetI | ASST | 3 cut(s) | 57, 116, 141 |
| SmlI | CTYRAG | 1 cut(s) | 56 |
| SmoI | CTYRAG | 1 cut(s) | 56 |
| Sse9I | AATT | 1 cut(s) | 232 |
| SsiI | CCGC | 1 cut(s) | 148 |
| SspMI | CTAG | 1 cut(s) | 164 |
| TaaI | ACNGT | 1 cut(s) | 189 |
| TaiI | ACGT | 1 cut(s) | 141 |
| TaqI | TCGA | 2 cut(s) | 101, 116 |
| TasI | AATT | 1 cut(s) | 232 |
| TauI | GCSGC | 1 cut(s) | 151 |
| TfiI | GAWTC | 2 cut(s) | 36, 89 |
| Tru1I | TTAA | 2 cut(s) | 14, 215 |
| Tru9I | TTAA | 2 cut(s) | 14, 215 |
| TseFI | GTSAC | 2 cut(s) | 81, 183 |
| Tsp45I | GTSAC | 2 cut(s) | 81, 183 |
| TspGWI | ACGGA | 1 cut(s) | 48 |
| VspI | ATTAAT | 1 cut(s) | 14 |
| XspI | CTAG | 1 cut(s) | 164 |
| ZraI | GACGTC | 1 cut(s) | 139 |