Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003599

Physical Location & Seq

Genomic Coordinates Forward (+)

22009008 .. 22012804

Gene Structure 3797 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G59580.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2685 bp

ATGGAGAACCCATCAGCATCCAGAGATAATAAAGGTTTCTGTTTTCCAGATATTCCAGTAGAAGAAATGGATGGCTGGGTTAAGAATTTGATCTCTGAAGAAGATATGTTTAGCTCCTCTTCAACTTCAGAGCTTATGAATTTCGAATCTTTTGCTTCATGGTGCAACAGCCCTTCCGCTGCAGATATCTTGTTCACTCAATACGGTTTATCGACCTCTCAATCTATTATACCTTTCGGAGGCTTAGAAGGCTCATACGCTTGCGAGAAAAGACCGTTAGACTGTACTAGTGTTCCAAGGTCATTGAGCCATTCTCTTGATGAGAAGATGCTCAAAGCATTAAGTTTGTTTATGGAGTTCTCTGGAGAGGGAATTCTGGCACAGTTTTGGACTCCTATTAAGACAGGAGATCAGTACATGCTTAGTACTTGTGATCAGGCGTATCTGCTTGACTCGAGGCTATCTGGATACCGTGAAGCGTCGAGGAGATTCACTTTCTCTGCTGAAGCAAATCAATGCTCTTATCCAGGTCTTCCAGGCAGAGTCTTTATCTCTGGAGTTCCTGAGTGGACATCAAACGTTATGTATTACAAGACTGCTGAATATTTAAGGATGAAGCATGCATTAGATAACGAAGTCCGTGGTTCGATTGCAATTCCTGTCCTTGAAGCATCAGGTTCTTCTTGTTGTGCAGTTCTGGAACTTGTGACATGTAGGGAAAAACCAAACTTTGATGTGGAGATGAACTCTGTTTGCCGTGCTCTGCAGGCCGTGAACTTACAAACATCAACTATTCCTCGTCGCCAGTACCTTTCAAGTAATCAAAAAGAAGCTTTGGCTGAAATAAGAGATGTTCTCAGAGCAGTGTGCTATGCACATAGGTTGCCTTTAGCTCTAGCTTGGATTCCCTGTAGTTACTCCAAAGGAGCAAACGATGAGTTGGTAAAGGTTTATGGAAAAAACTCAAAGGAATGTTCTCTTCTTTGCATAGAAGAGACATCATGTTATGTGAATGATATGGAAATGGAAGGCTTTGTGAATGCATGTTTGGAGCATTATCTAAGAGAAGGGCAAGGAATTGTTGGCAAAGCACTCATATCAAACAAACCGTCTTTCTCATCTGATGTAAAGACATTTGATATCTGCGAGTACCCTCTTGTTCAACATGCTCGAAAGTTTGGTCTTAATGCTGCAGTTGCTACCAAACTGAGGAGCACATTCACTGGTGACAATGACTATATACTTGAGTTTTTTTTACCTGTAAGTATGAAGGGAAGCTCAGAACAACAACTTTTGCTGGACAGTCTCTCGGGCACCATGCAGAGACTATGTCGGACTCTGAAAACTGTTTCAGATGCTGAATCAATTGACGGTACAGAATTTGGATCTCGTAGTGTAGAAATGACAAATCTCCCACAGGCTACTGTATCCGTTGGAAGCTTTCATACGACATTTCTTGATACTGACGTCAACTCTACTCGAAGTACCTTTTCGAACATCTCCTCTAATAAAAGAAATGAAATGGCAGGTTCTCAAGGCACTCTTCAGCAGGAAATTAGCGGAGCAAGAAGATTAGAGAAGAAGAAAAGCAGTACAGAGAAGAATGTGAGCTTAAATGTTCTCCAACAATACTTCTCTGGGAGCTTAAAGGATGCTGCAAAAAGCCTTGGTGTTTGTCCGACTACACTAAAAAGGATATGTAGACAACACGGAATTATGAGATGGCCATCTCGAAAGATTAACAAAGTGAATAGGTCACTAAGGAAAATACAGACGGTGCTTGACTCTGTCCAGGGTGTAGAAGGAGGACTGAAGTTTGACTCGGTGACAGGGGAATTTGTAGCAGTTGGCCCTTTTATACAAGAATTTGGGACCCAAAAGAGTCTGTCTTCTCATGATGAAGATGCACTTGCAAGAAGCCAAGGTGATATGGATGAAGATGTGTCAGTAGAGCCTTTGGAAGTTAAATCTCATGATGGTGGCGGTGTCAAGTTGGAGGAGGATGTTGAAACAAACCACCAAGCGGGACCAGGATCCTTGAAGAAGCCATGGACTTGGATAAGCAAACAGTCTGGCTTGATCTATAGTGATGATACCGACATAGGAAAAAGAAGTGAAGAGGTAAACAAGGATAAAGAAGACCTTTGTGTTCGAAGGTGCTTGAGCTCTGTAGCACTTGCAGGTGATGGAATGAATACAAGAATCGAGCGAGGTAATGGAACTGTAGAACCAAACCACTCCATATCAAGTAGCATGTCGGATTCATCAAATAGCTCAGGAGCAGTTTTGCTGGGAAGTTCATCTGCTTCCTTGGAACAAAACTGGAACCAAATAAGAACTCATAACAATAGCGGTGAAAGCGGATCAAGTTCAACACTAACCGTAAAAGCCACTTACAGAGAGGACACTGTACGTTTCAAGCTTGATCCATACGTTGTTGGGTGTTCTCAGCTCTACAGAGAAGTGGCTAAGCGTTTCAAGCTGCAAGAAGGTGCCTTTCAGTTGAAATACTTGGATGATGAAGAAGAATGGGTGATGTTGGTCACAGATTCTGATCTCCATGAATGCTTCGAGATATTAAATGGTATGAGAAAACATACAGTGAAGTTTCTGGTCCGTGATATACCGAACACCGCAATGGGAAGTTCCGCAGGCAGCAATGGTTACCTCGGAACAGGCACCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PB1 RWP-RK

Protein Analysis

894

Amino Acids

98.71

Weight (kDa)

5.43

Isoelectric Point (pI)

44.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GAF_NLP	PF22922	270 - 447	2.4e-69	NLP protein GAF domain
RWP-RK	PF02042	536 - 582	4.3e-23	RWP-RK domain
PB1	PF00564	792 - 873	1.2e-18	PB1 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003599)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G43500 AT2G43500 AT2G43500 AT2G43500 AT2G43500 AT2G43500 AT2G43500 AT2G43500 AT2G43500 AT2G43500 AT2G43500 AT3G59580 AT3G59580 AT3G59580
fragaria_vesca	FvH4_1g24430 FvH4_1g24430 FvH4_1g24430
malus_domestica	MD04G1116200.v1.1 MD12G1131800.v1.1
prunus_persica	Prupe.1G200100_v2.0.a1
pyrus_communis	pycom04g10620 pycom12g12770
rosa_chinensis	RchiOBHm_Chr2g0121311
rosa_laevigata	RLG00000018617
rosa_multiflora	Rmu_sc0000079.1_g000028 Rmu_sc0000315.1_g000101
rosa_roxburghii	Rroxscaffold_2G00122460
rosa_rugosa	Rorug02G0233300 Rorug02G0233400 Rorug02G0233500
rosa_samantha	Rh2AG290100 Rh2BG301000 Rh2CG279700 Rh2DG314900
rosa_wichuraiana	Rw2G023260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2171
AatII	GACGTC	1 cut(s)	1470
Acc36I	ACCTGC	2 cut(s)	1517, 2171
AccB1I	GGYRCC	3 cut(s)	1313, 2492, 2678
AccI	GTMKAC	1 cut(s)	1702
AciI	CCGC	8 cut(s)	177, 1560, 1983, 2024, 2352, 2361, 2634, 2649
AclI	AACGTT	1 cut(s)	579
AclWI	GGATC	5 cut(s)	1393, 2028, 2041, 2371, 2420
AcoI	YGGCCR	1 cut(s)	1724
AcsI	RAATTY	6 cut(s)	85, 139, 372, 1379, 1835, 1865
AcuI	CTGAAG	5 cut(s)	111, 117, 525, 1529, 1832
AcyI	GRCGYC	1 cut(s)	1467
AfaI	GTAC	9 cut(s)	286, 416, 427, 809, 1151, 1375, 1486, 1594, 2412
AfiI	CCNNNNNNNGG	3 cut(s)	239, 1209, 2023
AflIII	ACRYGT	1 cut(s)	710
AhlI	ACTAGT	1 cut(s)	287
AjnI	CCWGG	4 cut(s)	526, 535, 1791, 2029
AjuI	GAANNNNNNNTTGG	2 cut(s)	1031, 1063
Alw21I	GWGCWC	3 cut(s)	763, 1217, 2168
Alw26I	GTCTC	3 cut(s)	989, 1310, 1318
AlwI	GGATC	5 cut(s)	1393, 2028, 2041, 2371, 2420
AlwNI	CAGNNNCTG	2 cut(s)	1358, 2552
Ama87I	CYCGRG	2 cut(s)	454, 1309
AoxI	GGCC	3 cut(s)	768, 1724, 1849
ApeKI	GCWGC	5 cut(s)	179, 1190, 1655, 2482, 2655
ApoI	RAATTY	6 cut(s)	85, 139, 372, 1379, 1835, 1865
ArsI	GACNNNNNNTTYG	4 cut(s)	1094, 1126, 1165, 1197
AspS9I	GGNCC	4 cut(s)	1850, 1872, 2027, 2614
AsuHPI	GGTGA	6 cut(s)	1238, 1837, 1937, 2195, 2366, 2545
AsuII	TTCGAA	3 cut(s)	144, 1493, 2152
AvaI	CYCGRG	2 cut(s)	454, 1309
AvaII	GGWCC	3 cut(s)	1872, 2027, 2614
BaeGI	GKGCMC	1 cut(s)	1316
BaeI	ACNNNNGTAYC	2 cut(s)	1452, 1485
BalI	TGGCCA	1 cut(s)	1726
BamHI	GGATCC	1 cut(s)	2033
BanI	GGYRCC	3 cut(s)	1313, 2492, 2678
BanII	GRGCYC	1 cut(s)	2168
BarI	GAAGNNNNNNTAC	2 cut(s)	1429, 1461
BbsI	GAAGAC	3 cut(s)	524, 1881, 2145
Bbv12I	GWGCWC	3 cut(s)	763, 1217, 2168
BbvI	GCAGC	5 cut(s)	166, 1177, 1642, 2469, 2667
BccI	CCATC	6 cut(s)	19, 65, 1716, 1735, 1970, 2180
BceAI	ACGGC	2 cut(s)	741, 755
BcgI	CGANNNNNNTGC	2 cut(s)	134, 168
BciT130I	CCWGG	4 cut(s)	528, 537, 1793, 2031
BciVI	GTATCC	2 cut(s)	461, 1438
BclI	TGATCA	1 cut(s)	433
BcoDI	GTCTC	3 cut(s)	989, 1310, 1318
BcuI	ACTAGT	1 cut(s)	287
BfaI	CTAG	2 cut(s)	288, 896
BfmI	CTRYAG	8 cut(s)	180, 764, 910, 1191, 2083, 2169, 2223, 2455
BfuAI	ACCTGC	2 cut(s)	1517, 2171
BfuI	GTATCC	2 cut(s)	461, 1438
BisI	GCNGC	5 cut(s)	180, 1191, 1656, 2483, 2656
BlpI	GCTNAGC	1 cut(s)	2469
BlsI	GCNGC	5 cut(s)	181, 1192, 1657, 2484, 2657
BmcAI	AGTACT	1 cut(s)	427
Bme1390I	CCNGG	4 cut(s)	528, 537, 1793, 2031
Bme18I	GGWCC	3 cut(s)	1872, 2027, 2614
BmeT110I	CYCGRG	2 cut(s)	454, 1309
BmgT120I	GGNCC	4 cut(s)	1850, 1872, 2027, 2614
BmiI	GGNNCC	8 cut(s)	1315, 1873, 1874, 2028, 2035, 2327, 2494, 2680
BmrFI	CCNGG	4 cut(s)	528, 537, 1793, 2031
BmsI	GCATC	6 cut(s)	26, 318, 680, 1345, 1642, 1894
BpiI	GAAGAC	3 cut(s)	524, 1881, 2145
BplI	GAGNNNNNCTC	6 cut(s)	298, 330, 731, 763, 840, 872
BpmI	CTGGAG	2 cut(s)	384, 576
Bpu10I	CCTNAGC	1 cut(s)	2275
Bpu1102I	GCTNAGC	1 cut(s)	2469
Bpu14I	TTCGAA	3 cut(s)	144, 1493, 2152
BpuEI	CTTGAG	3 cut(s)	1265, 1518, 2182
BsaBI	GATNNNNATC	2 cut(s)	1726, 2553
BsaHI	GRCGYC	1 cut(s)	1467
BsaJI	CCNNGG	8 cut(s)	296, 640, 1666, 1792, 1921, 2048, 2310, 2668
Bsc4I	CCNNNNNNNGG	3 cut(s)	239, 1209, 2023
Bse1I	ACTGG	4 cut(s)	56, 805, 1228, 2327
Bse3DI	GCAATG	2 cut(s)	2643, 2665
Bse8I	GATNNNNATC	2 cut(s)	1726, 2553
BseBI	CCWGG	4 cut(s)	528, 537, 1793, 2031
BseDI	CCNNGG	8 cut(s)	296, 640, 1666, 1792, 1921, 2048, 2310, 2668
BseGI	GGATG	7 cut(s)	17, 76, 618, 1657, 1939, 2008, 2521
BseJI	GATNNNNATC	2 cut(s)	1726, 2553
BseLI	CCNNNNNNNGG	3 cut(s)	239, 1209, 2023
BseMI	GCAATG	2 cut(s)	2643, 2665
BseMII	CTCAG	6 cut(s)	555, 871, 1199, 1293, 2289, 2462
BseNI	ACTGG	4 cut(s)	56, 805, 1228, 2327
BseRI	GAGGAG	5 cut(s)	106, 499, 1225, 1492, 2012
BseSI	GKGCMC	1 cut(s)	1316
BseXI	GCAGC	5 cut(s)	166, 1177, 1642, 2469, 2667
BseYI	CCCAGC	2 cut(s)	75, 2290
BsgI	GTGCAG	1 cut(s)	711
BshFI	GGCC	3 cut(s)	770, 1726, 1851
BshNI	GGYRCC	3 cut(s)	1313, 2492, 2678
BsiHKAI	GWGCWC	3 cut(s)	763, 1217, 2168
BsiHKCI	CYCGRG	2 cut(s)	454, 1309
BslFI	GGGAC	2 cut(s)	1885, 2040
BslI	CCNNNNNNNGG	3 cut(s)	239, 1209, 2023
BsmAI	GTCTC	3 cut(s)	989, 1310, 1318
BsmFI	GGGAC	2 cut(s)	1885, 2040
BsmI	GAATGC	2 cut(s)	1045, 2570
BsnI	GGCC	3 cut(s)	770, 1726, 1851
BsoBI	CYCGRG	2 cut(s)	454, 1309
Bsp119I	TTCGAA	3 cut(s)	144, 1493, 2152
Bsp1286I	GDGCHC	4 cut(s)	763, 1217, 1316, 2168
Bsp143I	GATC	9 cut(s)	90, 409, 433, 1385, 2033, 2079, 2363, 2425, 2554
Bsp1720I	GCTNAGC	1 cut(s)	2469
Bsp19I	CCATGG	1 cut(s)	2048
BspACI	CCGC	8 cut(s)	177, 1560, 1983, 2024, 2352, 2361, 2634, 2649
BspANI	GGCC	3 cut(s)	770, 1726, 1851
BspCNI	CTCAG	6 cut(s)	556, 870, 1200, 1292, 2288, 2461
BspHI	TCATGA	2 cut(s)	1894, 1972
BspLI	GGNNCC	8 cut(s)	1315, 1873, 1874, 2028, 2035, 2327, 2494, 2680
BspMAI	CTGCAG	3 cut(s)	184, 768, 1195
BspMI	ACCTGC	2 cut(s)	1517, 2171
BspPI	GGATC	5 cut(s)	1393, 2028, 2041, 2371, 2420
BspT104I	TTCGAA	3 cut(s)	144, 1493, 2152
BspT107I	GGYRCC	3 cut(s)	1313, 2492, 2678
BsrDI	GCAATG	2 cut(s)	2643, 2665
BsrI	ACTGG	4 cut(s)	56, 805, 1228, 2327
BssECI	CCNNGG	8 cut(s)	296, 640, 1666, 1792, 1921, 2048, 2310, 2668
BssMI	GATC	9 cut(s)	90, 409, 433, 1385, 2033, 2079, 2363, 2425, 2554
BssNI	GRCGYC	1 cut(s)	1467
BssT1I	CCWWGG	5 cut(s)	296, 1666, 1921, 2048, 2310
Bst2UI	CCWGG	4 cut(s)	528, 537, 1793, 2031
Bst6I	CTCTTC	5 cut(s)	124, 984, 987, 1548, 2112
BstACI	GRCGYC	1 cut(s)	1467
BstBI	TTCGAA	3 cut(s)	144, 1493, 2152
BstC8I	GCNNGC	4 cut(s)	262, 621, 768, 2653
BstDSI	CCRYGG	2 cut(s)	640, 2048
BstEII	GGTNACC	1 cut(s)	2663
BstENI	CCTNNNNNAGG	1 cut(s)	237
BstF5I	GGATG	7 cut(s)	17, 76, 618, 1657, 1939, 2008, 2521
BstKTI	GATC	9 cut(s)	93, 412, 436, 1388, 2036, 2082, 2366, 2428, 2557
BstMAI	GTCTC	3 cut(s)	989, 1310, 1318
BstMBI	GATC	9 cut(s)	90, 409, 433, 1385, 2033, 2079, 2363, 2425, 2554
BstMWI	GCNNNNNNNGC	5 cut(s)	249, 767, 1196, 2358, 2479
BstNI	CCWGG	4 cut(s)	528, 537, 1793, 2031
BstNSI	RCATGY	6 cut(s)	421, 623, 714, 1047, 1169, 2257
BstPI	GGTNACC	1 cut(s)	2663
BstSCI	CCNGG	4 cut(s)	526, 535, 1791, 2029
BstSFI	CTRYAG	8 cut(s)	180, 764, 910, 1191, 2083, 2169, 2223, 2455
BstSLI	GKGCMC	1 cut(s)	1316
BstV1I	GCAGC	5 cut(s)	166, 1177, 1642, 2469, 2667
BstV2I	GAAGAC	3 cut(s)	524, 1881, 2145
BstX2I	RGATCY	2 cut(s)	1385, 2033
BstXI	CCANNNNNNTGG	1 cut(s)	2055
BstYI	RGATCY	2 cut(s)	1385, 2033
BsuI	GTATCC	2 cut(s)	461, 1438
BsuRI	GGCC	3 cut(s)	770, 1726, 1851
BtgI	CCRYGG	2 cut(s)	640, 2048
BtsCI	GGATG	7 cut(s)	17, 76, 618, 1657, 1939, 2008, 2521
BtsI	GCAGTG	1 cut(s)	870
BtsIMutI	CAGTG	4 cut(s)	870, 1221, 2406, 2607
BveI	ACCTGC	2 cut(s)	1517, 2171
Cac8I	GCNNGC	4 cut(s)	262, 621, 768, 2653
CaiI	CAGNNNCTG	2 cut(s)	1358, 2552
CciI	TCATGA	2 cut(s)	1894, 1972
Cfr13I	GGNCC	4 cut(s)	1850, 1872, 2027, 2614
CseI	GACGC	1 cut(s)	468
Csp6I	GTAC	9 cut(s)	285, 415, 426, 808, 1150, 1374, 1485, 1593, 2411
CviQI	GTAC	9 cut(s)	285, 415, 426, 808, 1150, 1374, 1485, 1593, 2411
DpnI	GATC	9 cut(s)	92, 411, 435, 1387, 2035, 2081, 2365, 2427, 2556
DpnII	GATC	9 cut(s)	90, 409, 433, 1385, 2033, 2079, 2363, 2425, 2554
EaeI	YGGCCR	1 cut(s)	1724
Eam1104I	CTCTTC	5 cut(s)	124, 984, 987, 1548, 2112
EarI	CTCTTC	5 cut(s)	124, 984, 987, 1548, 2112
Ecl136II	GAGCTC	1 cut(s)	2166
Eco130I	CCWWGG	5 cut(s)	296, 1666, 1921, 2048, 2310
Eco24I	GRGCYC	1 cut(s)	2168
Eco32I	GATATC	2 cut(s)	187, 1141
Eco47I	GGWCC	3 cut(s)	1872, 2027, 2614
Eco53kI	GAGCTC	1 cut(s)	2166
Eco57I	CTGAAG	5 cut(s)	111, 117, 525, 1529, 1832
Eco88I	CYCGRG	2 cut(s)	454, 1309
Eco91I	GGTNACC	1 cut(s)	2663
EcoICRI	GAGCTC	1 cut(s)	2166
EcoNI	CCTNNNNNAGG	1 cut(s)	237
EcoO109I	RGGNCCY	1 cut(s)	1872
EcoO65I	GGTNACC	1 cut(s)	2663
EcoRI	GAATTC	1 cut(s)	372
EcoRII	CCWGG	4 cut(s)	526, 535, 1791, 2029
EcoRV	GATATC	2 cut(s)	187, 1141
EcoT14I	CCWWGG	5 cut(s)	296, 1666, 1921, 2048, 2310
EcoT22I	ATGCAT	2 cut(s)	625, 1045
EcoT38I	GRGCYC	1 cut(s)	2168
ErhI	CCWWGG	5 cut(s)	296, 1666, 1921, 2048, 2310
FalI	AAGNNNNNCTT	6 cut(s)	1527, 1559, 1893, 1925, 2127, 2159
FaqI	GGGAC	2 cut(s)	1885, 2040
FauI	CCCGC	1 cut(s)	2017
FbaI	TGATCA	1 cut(s)	433
FblI	GTMKAC	1 cut(s)	1702
Fnu4HI	GCNGC	5 cut(s)	180, 1191, 1656, 2483, 2656
FokI	GGATG	7 cut(s)	4, 83, 625, 1664, 1946, 2015, 2528
FriOI	GRGCYC	1 cut(s)	2168
Fsp4HI	GCNGC	5 cut(s)	180, 1191, 1656, 2483, 2656
FspBI	CTAG	2 cut(s)	288, 896
GluI	GCNGC	5 cut(s)	180, 1191, 1656, 2483, 2656
GsaI	CCCAGC	2 cut(s)	79, 2294
GsuI	CTGGAG	2 cut(s)	384, 576
HaeIII	GGCC	3 cut(s)	770, 1726, 1851
HgaI	GACGC	1 cut(s)	468
Hin1I	GRCGYC	1 cut(s)	1467
HincII	GTYRAC	1 cut(s)	1471
HindII	GTYRAC	1 cut(s)	1471
HindIII	AAGCTT	3 cut(s)	831, 1438, 2420
HphI	GGTGA	6 cut(s)	1238, 1837, 1937, 2195, 2366, 2545
Hpy166II	GTNNAC	6 cut(s)	195, 570, 775, 1471, 1703, 2125
Hpy8I	GTNNAC	6 cut(s)	195, 570, 775, 1471, 1703, 2125
Hpy99I	CGWCG	2 cut(s)	484, 804
HpyAV	CCTTC	8 cut(s)	183, 242, 1022, 1061, 1264, 1796, 2148, 2483
HpyCH4IV	ACGT	4 cut(s)	579, 1467, 2413, 2433
HpyF10VI	GCNNNNNNNGC	5 cut(s)	249, 767, 1196, 2358, 2479
HpySE526I	ACGT	4 cut(s)	579, 1467, 2413, 2433
Hsp92I	GRCGYC	1 cut(s)	1467
KflI	GGGWCCC	1 cut(s)	1872
Ksp22I	TGATCA	1 cut(s)	433
Kzo9I	GATC	9 cut(s)	90, 409, 433, 1385, 2033, 2079, 2363, 2425, 2554
LmnI	GCTCC	7 cut(s)	119, 926, 1051, 1212, 1562, 1641, 2279
Lsp1109I	GCAGC	5 cut(s)	166, 1177, 1642, 2469, 2667
LweI	GCATC	6 cut(s)	26, 318, 680, 1345, 1642, 1894
MaeI	CTAG	2 cut(s)	288, 896
MaeII	ACGT	4 cut(s)	579, 1467, 2413, 2433
MaeIII	GTNAC	7 cut(s)	706, 914, 1226, 1755, 1825, 2542, 2663
MalI	GATC	9 cut(s)	92, 411, 435, 1387, 2035, 2081, 2365, 2427, 2556
MboI	GATC	9 cut(s)	90, 409, 433, 1385, 2033, 2079, 2363, 2425, 2554
MfeI	CAATTG	1 cut(s)	1365
MflI	RGATCY	2 cut(s)	1385, 2033
MhlI	GDGCHC	4 cut(s)	763, 1217, 1316, 2168
MlsI	TGGCCA	1 cut(s)	1726
MluNI	TGGCCA	1 cut(s)	1726
MlyI	GAGTC	7 cut(s)	385, 446, 552, 1330, 1778, 1814, 1891
MmeI	TCCRAC	6 cut(s)	1313, 1414, 1648, 1703, 1974, 2238
Mox20I	TGGCCA	1 cut(s)	1726
Mph1103I	ATGCAT	2 cut(s)	625, 1045
MscI	TGGCCA	1 cut(s)	1726
MslI	CAYNNNNRTG	2 cut(s)	1977, 2636
Msp20I	TGGCCA	1 cut(s)	1726
MspA1I	CMGCKG	1 cut(s)	179
MspR9I	CCNGG	4 cut(s)	528, 537, 1793, 2031
MunI	CAATTG	1 cut(s)	1365
Mva1269I	GAATGC	2 cut(s)	1045, 2570
MvaI	CCWGG	4 cut(s)	528, 537, 1793, 2031
MwoI	GCNNNNNNNGC	5 cut(s)	249, 767, 1196, 2358, 2479
NcoI	CCATGG	1 cut(s)	2048
NdeII	GATC	9 cut(s)	90, 409, 433, 1385, 2033, 2079, 2363, 2425, 2554
NlaIV	GGNNCC	8 cut(s)	1315, 1873, 1874, 2028, 2035, 2327, 2494, 2680
NmuCI	GTSAC	5 cut(s)	706, 1226, 1755, 1825, 2542
NsiI	ATGCAT	2 cut(s)	625, 1045
NspI	RCATGY	6 cut(s)	421, 623, 714, 1047, 1169, 2257
NspV	TTCGAA	3 cut(s)	144, 1493, 2152
PaeI	GCATGC	1 cut(s)	623
PaeR7I	CTCGAG	1 cut(s)	454
PagI	TCATGA	2 cut(s)	1894, 1972
PaqCI	CACCTGC	1 cut(s)	2171
PciI	ACATGT	1 cut(s)	710
PctI	GAATGC	2 cut(s)	1045, 2570
PfeI	GAWTC	7 cut(s)	146, 489, 904, 1361, 2202, 2261, 2549
PflFI	GACNNNGTC	2 cut(s)	1329, 1787
PkrI	GCNGC	5 cut(s)	181, 1192, 1657, 2484, 2657
PleI	GAGTC	7 cut(s)	385, 446, 551, 1330, 1778, 1814, 1890
PpsI	GAGTC	7 cut(s)	385, 446, 551, 1330, 1778, 1814, 1890
PpuMI	RGGWCCY	1 cut(s)	1872
PscI	ACATGT	1 cut(s)	710
Psp124BI	GAGCTC	1 cut(s)	2168
Psp1406I	AACGTT	1 cut(s)	579
Psp5II	RGGWCCY	1 cut(s)	1872
Psp6I	CCWGG	4 cut(s)	526, 535, 1791, 2029
PspEI	GGTNACC	1 cut(s)	2663
PspFI	CCCAGC	2 cut(s)	75, 2290
PspGI	CCWGG	4 cut(s)	526, 535, 1791, 2029
PspN4I	GGNNCC	8 cut(s)	1315, 1873, 1874, 2028, 2035, 2327, 2494, 2680
PspPI	GGNCC	4 cut(s)	1850, 1872, 2027, 2614
PspPPI	RGGWCCY	1 cut(s)	1872
PspXI	VCTCGAGB	1 cut(s)	454
PstI	CTGCAG	3 cut(s)	184, 768, 1195
PstNI	CAGNNNCTG	2 cut(s)	1358, 2552
PsuI	RGATCY	2 cut(s)	1385, 2033
PsyI	GACNNNGTC	2 cut(s)	1329, 1787
RsaI	GTAC	9 cut(s)	286, 416, 427, 809, 1151, 1375, 1486, 1594, 2412
RsaNI	GTAC	9 cut(s)	285, 415, 426, 808, 1150, 1374, 1485, 1593, 2411
RseI	CAYNNNNRTG	2 cut(s)	1977, 2636
SacI	GAGCTC	1 cut(s)	2168
SatI	GCNGC	5 cut(s)	180, 1191, 1656, 2483, 2656
Sau3AI	GATC	9 cut(s)	90, 409, 433, 1385, 2033, 2079, 2363, 2425, 2554
Sau96I	GGNCC	4 cut(s)	1850, 1872, 2027, 2614
ScaI	AGTACT	1 cut(s)	427
SchI	GAGTC	7 cut(s)	385, 446, 552, 1330, 1778, 1814, 1891
ScrFI	CCNGG	4 cut(s)	528, 537, 1793, 2031
SduI	GDGCHC	4 cut(s)	763, 1217, 1316, 2168
SfaNI	GCATC	6 cut(s)	26, 318, 680, 1345, 1642, 1894
SfcI	CTRYAG	8 cut(s)	180, 764, 910, 1191, 2083, 2169, 2223, 2455
Sfr274I	CTCGAG	1 cut(s)	454
SfuI	TTCGAA	3 cut(s)	144, 1493, 2152
SinI	GGWCC	3 cut(s)	1872, 2027, 2614
SlaI	CTCGAG	1 cut(s)	454
SmiMI	CAYNNNNRTG	2 cut(s)	1977, 2636
SmlI	CTYRAG	4 cut(s)	454, 1244, 1533, 2161
SmoI	CTYRAG	4 cut(s)	454, 1244, 1533, 2161
SpeI	ACTAGT	1 cut(s)	287
SphI	GCATGC	1 cut(s)	623
SsiI	CCGC	8 cut(s)	177, 1560, 1983, 2024, 2352, 2361, 2634, 2649
SspI	AATATT	1 cut(s)	605
SspMI	CTAG	2 cut(s)	288, 896
SstI	GAGCTC	1 cut(s)	2168
StyD4I	CCNGG	4 cut(s)	526, 535, 1791, 2029
StyI	CCWWGG	5 cut(s)	296, 1666, 1921, 2048, 2310
TaiI	ACGT	4 cut(s)	582, 1470, 2416, 2436
TatI	WGTACW	4 cut(s)	284, 414, 425, 1592
TfiI	GAWTC	7 cut(s)	146, 489, 904, 1361, 2202, 2261, 2549
TscAI	CASTG	4 cut(s)	870, 1228, 2413, 2607
TseFI	GTSAC	5 cut(s)	706, 1226, 1755, 1825, 2542
TseI	GCWGC	5 cut(s)	179, 1190, 1655, 2482, 2655
Tsp45I	GTSAC	5 cut(s)	706, 1226, 1755, 1825, 2542
TspGWI	ACGGA	4 cut(s)	629, 1420, 1725, 2606
TspRI	CASTG	4 cut(s)	870, 1228, 2413, 2607
Tth111I	GACNNNGTC	2 cut(s)	1329, 1787
VpaK11BI	GGWCC	3 cut(s)	1872, 2027, 2614
XagI	CCTNNNNNAGG	1 cut(s)	237
XapI	RAATTY	6 cut(s)	85, 139, 372, 1379, 1835, 1865
XceI	RCATGY	6 cut(s)	421, 623, 714, 1047, 1169, 2257
XhoI	CTCGAG	1 cut(s)	454
XmiI	GTMKAC	1 cut(s)	1702
XspI	CTAG	2 cut(s)	288, 896
ZraI	GACGTC	1 cut(s)	1468
ZrmI	AGTACT	1 cut(s)	427
Zsp2I	ATGCAT	2 cut(s)	625, 1045

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.