RWP-RK domain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G43500 AT2G43500 AT2G43500 AT2G43500 AT2G43500 AT2G43500 AT2G43500 AT2G43500 AT2G43500 AT2G43500 AT2G43500 AT3G59580 AT3G59580 AT3G59580 |
| fragaria_vesca | FvH4_1g24430 FvH4_1g24430 FvH4_1g24430 |
| malus_domestica | MD04G1116200.v1.1 MD12G1131800.v1.1 |
| prunus_persica | Prupe.1G200100_v2.0.a1 |
| pyrus_communis | pycom04g10620 pycom12g12770 |
| rosa_chinensis | RchiOBHm_Chr2g0121311 |
| rosa_laevigata | RLG00000018617 |
| rosa_multiflora | Rmu_sc0000079.1_g000028 Rmu_sc0000315.1_g000101 |
| rosa_roxburghii | Rroxscaffold_2G00122460 |
| rosa_rugosa | Rorug02G0233300 Rorug02G0233400 Rorug02G0233500 |
| rosa_samantha | Rh2AG290100 Rh2BG301000 Rh2CG279700 Rh2DG314900 |
| rosa_wichuraiana | Rw2G023260 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 179, 211 |
| AflII | CTTAAG | 1 cut(s) | 121 |
| AgsI | TTSAA | 2 cut(s) | 11, 261 |
| AluBI | AGCT | 3 cut(s) | 14, 120, 126 |
| AluI | AGCT | 3 cut(s) | 14, 120, 126 |
| AseI | ATTAAT | 1 cut(s) | 75 |
| AsuC2I | CCSGG | 1 cut(s) | 49 |
| BccI | CCATC | 2 cut(s) | 25, 169 |
| BcnI | CCSGG | 1 cut(s) | 49 |
| BfaI | CTAG | 1 cut(s) | 59 |
| BfrI | CTTAAG | 1 cut(s) | 121 |
| Bme1390I | CCNGG | 1 cut(s) | 49 |
| BmrFI | CCNGG | 1 cut(s) | 49 |
| BmsI | GCATC | 1 cut(s) | 198 |
| BpuMI | CCSGG | 1 cut(s) | 49 |
| Bse3DI | GCAATG | 1 cut(s) | 27 |
| BseGI | GGATG | 2 cut(s) | 36, 213 |
| BseMI | GCAATG | 1 cut(s) | 27 |
| BsiSI | CCGG | 1 cut(s) | 48 |
| Bsp143I | GATC | 1 cut(s) | 55 |
| BspACI | CCGC | 2 cut(s) | 179, 211 |
| BspTI | CTTAAG | 1 cut(s) | 121 |
| BsrDI | GCAATG | 1 cut(s) | 27 |
| BssMI | GATC | 1 cut(s) | 55 |
| Bst6I | CTCTTC | 2 cut(s) | 57, 186 |
| BstAFI | CTTAAG | 1 cut(s) | 121 |
| BstC8I | GCNNGC | 2 cut(s) | 113, 213 |
| BstDEI | CTNAG | 1 cut(s) | 107 |
| BstF5I | GGATG | 2 cut(s) | 36, 213 |
| BstKTI | GATC | 1 cut(s) | 58 |
| BstMBI | GATC | 1 cut(s) | 55 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 117 |
| BstSCI | CCNGG | 1 cut(s) | 47 |
| BtsCI | GGATG | 2 cut(s) | 36, 213 |
| Cac8I | GCNNGC | 2 cut(s) | 113, 213 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 136, 171 |
| CviAII | CATG | 2 cut(s) | 216, 238 |
| CviJI | RGCY | 5 cut(s) | 14, 94, 120, 126, 227 |
| CviKI_1 | RGCY | 5 cut(s) | 14, 94, 120, 126, 227 |
| DdeI | CTNAG | 1 cut(s) | 107 |
| DpnI | GATC | 1 cut(s) | 57 |
| DpnII | GATC | 1 cut(s) | 55 |
| Eam1104I | CTCTTC | 2 cut(s) | 57, 186 |
| EarI | CTCTTC | 2 cut(s) | 57, 186 |
| EciI | GGCGGA | 1 cut(s) | 194 |
| FaeI | CATG | 2 cut(s) | 219, 241 |
| FaiI | YATR | 7 cut(s) | 18, 39, 100, 129, 217, 239, 253 |
| FatI | CATG | 2 cut(s) | 215, 237 |
| FauI | CCCGC | 1 cut(s) | 204 |
| FokI | GGATG | 2 cut(s) | 43, 220 |
| FspBI | CTAG | 1 cut(s) | 59 |
| HapII | CCGG | 1 cut(s) | 48 |
| Hin1II | CATG | 2 cut(s) | 219, 241 |
| HindIII | AAGCTT | 2 cut(s) | 12, 118 |
| HinfI | GANTC | 1 cut(s) | 139 |
| HpaII | CCGG | 1 cut(s) | 48 |
| Hpy188I | TCNGA | 3 cut(s) | 138, 144, 290 |
| Hpy188III | TCNNGA | 1 cut(s) | 59 |
| HpyCH4V | TGCA | 1 cut(s) | 20 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 117 |
| HpyF3I | CTNAG | 1 cut(s) | 107 |
| Hsp92II | CATG | 2 cut(s) | 219, 241 |
| Kzo9I | GATC | 1 cut(s) | 55 |
| LpnPI | CCDG | 3 cut(s) | 12, 61, 138 |
| LweI | GCATC | 1 cut(s) | 198 |
| MaeI | CTAG | 1 cut(s) | 59 |
| MalI | GATC | 1 cut(s) | 57 |
| MboI | GATC | 1 cut(s) | 55 |
| MboII | GAAGA | 4 cut(s) | 74, 95, 200, 203 |
| MluCI | AATT | 1 cut(s) | 265 |
| MmeI | TCCRAC | 1 cut(s) | 48 |
| MnlI | CCTC | 1 cut(s) | 105 |
| MseI | TTAA | 2 cut(s) | 75, 122 |
| MslI | CAYNNNNRTG | 1 cut(s) | 173 |
| MspCI | CTTAAG | 1 cut(s) | 121 |
| MspI | CCGG | 1 cut(s) | 48 |
| MspR9I | CCNGG | 1 cut(s) | 49 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 117 |
| NciI | CCSGG | 1 cut(s) | 49 |
| NdeII | GATC | 1 cut(s) | 55 |
| NlaIII | CATG | 2 cut(s) | 219, 241 |
| PfeI | GAWTC | 1 cut(s) | 139 |
| PfoI | TCCNGGA | 1 cut(s) | 47 |
| PshBI | ATTAAT | 1 cut(s) | 75 |
| RseI | CAYNNNNRTG | 1 cut(s) | 173 |
| SaqAI | TTAA | 2 cut(s) | 75, 122 |
| Sau3AI | GATC | 1 cut(s) | 55 |
| ScrFI | CCNGG | 1 cut(s) | 49 |
| SetI | ASST | 4 cut(s) | 16, 122, 128, 157 |
| SfaNI | GCATC | 1 cut(s) | 198 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 173 |
| SmlI | CTYRAG | 1 cut(s) | 121 |
| SmoI | CTYRAG | 1 cut(s) | 121 |
| Sse9I | AATT | 1 cut(s) | 265 |
| SsiI | CCGC | 2 cut(s) | 179, 211 |
| SspMI | CTAG | 1 cut(s) | 59 |
| StyD4I | CCNGG | 1 cut(s) | 47 |
| TasI | AATT | 1 cut(s) | 265 |
| TfiI | GAWTC | 1 cut(s) | 139 |
| Tru1I | TTAA | 2 cut(s) | 75, 122 |
| Tru9I | TTAA | 2 cut(s) | 75, 122 |
| TspDTI | ATGAA | 3 cut(s) | 212, 254, 261 |
| Vha464I | CTTAAG | 1 cut(s) | 121 |
| VspI | ATTAAT | 1 cut(s) | 75 |
| XbaI | TCTAGA | 1 cut(s) | 58 |
| XspI | CTAG | 1 cut(s) | 59 |