Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0005372

Physical Location & Seq

Genomic Coordinates Forward (+)

22607099 .. 22609169

Gene Structure 2071 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G61080.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 981 bp

ATGGCGGTGGCTTCTCTTAGTATTTGCTTCTCTGCTCGGCCACATCTTCTTCTTCGCAACTTCTCTCCTCGACCCAAATTTGTTGCTATGGCTGCAATGAGTGAGGATCCAATTCGTGAATGGATTCTTACAGAAGGAAAAGCAACTCAGATAACAAAGATTGGTTCTGTTGGTGGTGGATGCATTAATCTTGCAAGTCATTATCAAACTGATGCTGGTTCTTTCTTCGTTAAAACTAACAGGAGTATTGGACCTGCCATGTTTGAGGGAGAGGCTCTTGGTCTTGAGGCTATGTATGAAACCAGAACAATCCGTGTTCCAAATCCACACAAAGCTGGGGAATTGCCAACAGGTGGATCTTATATCATCATGGAGTTTATAGATTTTGGGGGATCAAGAGGCAATCAGGCTGAATTAGGAAGGAAGCTAGCTGAGATGCATAAAGCCGGGAAAACTTCGAAAGGTTTTGGCTTTGAGGTTGACAACACTATTGGCAGTACCCCGCAGATCAATACTTGGTCTTCGGATTGGATTGAATTTTATGGTGAGAAGAGATTGGGTTACCAGCTTAAGTTAGCTAGGGATCAGTATGGTGACTCTGCTATTTATCAGAAAGGTCATACACTGATACAGAACATGGCACCTCTCTTTGAGAATGTTGTCATAGAACCGTGCTTGTTACATGGTGATCTCTGGAGCGGGAATATCGCATACGACAAGAACAACGAACCTGTCATTCTTGATCCTGCCTGTTACTATGGGCATAACGAGGCGGATTTTGGAATGTCGTGGTGCGCAGGATTTGGAGAATCTTTCTACAATGCCTATTTCAAGGTAATGCCAAAACAAGCGGGATATGAGAAGAGGAGGGATCTGTATTTGCTCTATCATTACTTGAACCATTATAACCTGTTTGGCTCGGGCTACCGATCATCTGCGATGTCAATCATCGATGATTATCTACGGATGCTCAAAGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Fructosamin_kin

Protein Analysis

326

Amino Acids

36.47

Weight (kDa)

6.51

Isoelectric Point (pI)

45.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Fructosamin_kin	PF03881	36 - 322	2.2e-105	Fructosamine kinase
APH	PF01636	57 - 278	4.1e-09	Phosphotransferase enzyme family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005372)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G61080 AT3G61080
fragaria_vesca	FvH4_7g13130 FvH4_7g13130 FvH4_7g13130 FvH4_7g13130 FvH4_7g13130
malus_domestica	MD07G1128500.v1.1
prunus_persica	Prupe.2G154600_v2.0.a1 Prupe.2G154600_v2.0.a1 Prupe.2G154600_v2.0.a1 Prupe.2G154600_v2.0.a1 Prupe.2G154600_v2.0.a1 Prupe.2G154600_v2.0.a1 Prupe.2G154600_v2.0.a1 Prupe.2G154600_v2.0.a1
pyrus_communis	pycom07g12430
rosa_chinensis	RchiOBHm_Chr1g0352261
rosa_laevigata	RLG00000028346
rosa_multiflora	Rmu_sc0011915.1_g000001
rosa_roxburghii	Rroxscaffold_4G00303060
rosa_rugosa	Rorug01G0226200 Rorug01G0226300 Rorug01G0226300
rosa_samantha	Rh1AG240600 Rh1BG211500 Rh1CG224400 Rh1DG237900
rosa_wichuraiana	Rw1G020840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	906
Acc16I	TGCGCA	1 cut(s)	796
Acc36I	ACCTGC	1 cut(s)	262
AccB1I	GGYRCC	1 cut(s)	640
AccB7I	CCANNNNNTGG	1 cut(s)	353
AccBSI	CCGCTC	1 cut(s)	699
AciI	CCGC	5 cut(s)	5, 503, 699, 773, 851
AclWI	GGATC	7 cut(s)	101, 114, 364, 400, 591, 737, 879
AcoI	YGGCCR	1 cut(s)	38
AcsI	RAATTY	2 cut(s)	77, 536
AfaI	GTAC	1 cut(s)	499
AfiI	CCNNNNNNNGG	1 cut(s)	353
AflII	CTTAAG	1 cut(s)	569
AgsI	TTSAA	3 cut(s)	536, 832, 898
AluBI	AGCT	6 cut(s)	335, 427, 431, 568, 578, 977
AluI	AGCT	6 cut(s)	335, 427, 431, 568, 578, 977
AlwI	GGATC	7 cut(s)	101, 114, 364, 400, 591, 737, 879
Ama87I	CYCGRG	1 cut(s)	919
AoxI	GGCC	1 cut(s)	38
ApeKI	GCWGC	1 cut(s)	92
ApoI	RAATTY	2 cut(s)	77, 536
AseI	ATTAAT	1 cut(s)	186
Asp700I	GAANNNNTTC	1 cut(s)	123
AspLEI	GCGC	1 cut(s)	797
AspS9I	GGNCC	1 cut(s)	251
AsuC2I	CCSGG	1 cut(s)	448
AsuHPI	GGTGA	3 cut(s)	557, 605, 698
AsuII	TTCGAA	1 cut(s)	458
AsuNHI	GCTAGC	1 cut(s)	427
AvaI	CYCGRG	1 cut(s)	919
AvaII	GGWCC	1 cut(s)	251
BamHI	GGATCC	1 cut(s)	106
BanI	GGYRCC	1 cut(s)	640
BbsI	GAAGAC	1 cut(s)	513
BbvI	GCAGC	1 cut(s)	79
BcnI	CCSGG	1 cut(s)	448
BfaI	CTAG	2 cut(s)	428, 579
BfrI	CTTAAG	1 cut(s)	569
BfuAI	ACCTGC	1 cut(s)	262
BisI	GCNGC	1 cut(s)	93
BlsI	GCNGC	1 cut(s)	94
Bme1390I	CCNGG	1 cut(s)	448
Bme18I	GGWCC	1 cut(s)	251
BmeT110I	CYCGRG	1 cut(s)	919
BmgT120I	GGNCC	1 cut(s)	251
BmiI	GGNNCC	2 cut(s)	108, 642
BmrFI	CCNGG	1 cut(s)	448
BmsI	GCATC	4 cut(s)	170, 202, 426, 957
BmtI	GCTAGC	1 cut(s)	431
BpiI	GAAGAC	1 cut(s)	513
BpmI	CTGGAG	1 cut(s)	715
Bpu14I	TTCGAA	1 cut(s)	458
BpuEI	CTTGAG	1 cut(s)	305
BpuMI	CCSGG	1 cut(s)	448
Bsa29I	ATCGAT	1 cut(s)	951
BsaBI	GATNNNNATC	2 cut(s)	944, 957
Bsc4I	CCNNNNNNNGG	1 cut(s)	353
Bse3DI	GCAATG	1 cut(s)	102
Bse8I	GATNNNNATC	2 cut(s)	944, 957
BseCI	ATCGAT	1 cut(s)	951
BseGI	GGATG	2 cut(s)	185, 972
BseJI	GATNNNNATC	2 cut(s)	944, 957
BseLI	CCNNNNNNNGG	1 cut(s)	353
BseMI	GCAATG	1 cut(s)	102
BseMII	CTCAG	2 cut(s)	161, 423
BseRI	GAGGAG	2 cut(s)	57, 880
BseXI	GCAGC	1 cut(s)	79
BseYI	CCCAGC	1 cut(s)	335
BshFI	GGCC	1 cut(s)	40
BshNI	GGYRCC	1 cut(s)	640
BshVI	ATCGAT	1 cut(s)	951
BsiHKCI	CYCGRG	1 cut(s)	919
BsiSI	CCGG	1 cut(s)	447
BslI	CCNNNNNNNGG	1 cut(s)	353
BsnI	GGCC	1 cut(s)	40
BsoBI	CYCGRG	1 cut(s)	919
Bsp119I	TTCGAA	1 cut(s)	458
Bsp143I	GATC	9 cut(s)	106, 356, 392, 507, 583, 688, 742, 871, 929
BspACI	CCGC	5 cut(s)	5, 503, 699, 773, 851
BspANI	GGCC	1 cut(s)	40
BspCNI	CTCAG	2 cut(s)	160, 424
BspDI	ATCGAT	1 cut(s)	951
BspLI	GGNNCC	2 cut(s)	108, 642
BspMI	ACCTGC	1 cut(s)	262
BspOI	GCTAGC	1 cut(s)	431
BspPI	GGATC	7 cut(s)	101, 114, 364, 400, 591, 737, 879
BspT104I	TTCGAA	1 cut(s)	458
BspT107I	GGYRCC	1 cut(s)	640
BspTI	CTTAAG	1 cut(s)	569
BsrBI	CCGCTC	1 cut(s)	699
BsrDI	GCAATG	1 cut(s)	102
BssMI	GATC	9 cut(s)	106, 356, 392, 507, 583, 688, 742, 871, 929
Bst4CI	ACNGT	1 cut(s)	672
Bst6I	CTCTTC	2 cut(s)	545, 857
BstAFI	CTTAAG	1 cut(s)	569
BstBI	TTCGAA	1 cut(s)	458
BstC8I	GCNNGC	1 cut(s)	429
BstDEI	CTNAG	3 cut(s)	17, 147, 432
BstEII	GGTNACC	1 cut(s)	560
BstF5I	GGATG	2 cut(s)	185, 972
BstHHI	GCGC	1 cut(s)	797
BstKTI	GATC	9 cut(s)	109, 359, 395, 510, 586, 691, 745, 874, 932
BstMBI	GATC	9 cut(s)	106, 356, 392, 507, 583, 688, 742, 871, 929
BstMWI	GCNNNNNNNGC	1 cut(s)	92
BstPI	GGTNACC	1 cut(s)	560
BstSCI	CCNGG	1 cut(s)	446
BstV1I	GCAGC	1 cut(s)	79
BstV2I	GAAGAC	1 cut(s)	513
BstX2I	RGATCY	3 cut(s)	106, 356, 871
BstYI	RGATCY	3 cut(s)	106, 356, 871
Bsu15I	ATCGAT	1 cut(s)	951
BsuRI	GGCC	1 cut(s)	40
BsuTUI	ATCGAT	1 cut(s)	951
BtgZI	GCGATG	1 cut(s)	953
BtsCI	GGATG	2 cut(s)	185, 972
BtsIMutI	CAGTG	1 cut(s)	623
BveI	ACCTGC	1 cut(s)	262
Cac8I	GCNNGC	1 cut(s)	429
CfoI	GCGC	1 cut(s)	797
Cfr13I	GGNCC	1 cut(s)	251
ClaI	ATCGAT	1 cut(s)	951
Csp6I	GTAC	1 cut(s)	498
CviAII	CATG	4 cut(s)	259, 370, 637, 683
CviQI	GTAC	1 cut(s)	498
DdeI	CTNAG	3 cut(s)	17, 147, 432
DpnI	GATC	9 cut(s)	108, 358, 394, 509, 585, 690, 744, 873, 931
DpnII	GATC	9 cut(s)	106, 356, 392, 507, 583, 688, 742, 871, 929
EaeI	YGGCCR	1 cut(s)	38
Eam1104I	CTCTTC	2 cut(s)	545, 857
EarI	CTCTTC	2 cut(s)	545, 857
EciI	GGCGGA	1 cut(s)	788
Eco47I	GGWCC	1 cut(s)	251
Eco88I	CYCGRG	1 cut(s)	919
Eco91I	GGTNACC	1 cut(s)	560
EcoO65I	GGTNACC	1 cut(s)	560
EcoT22I	ATGCAT	2 cut(s)	185, 441
FaeI	CATG	4 cut(s)	262, 373, 640, 686
FatI	CATG	4 cut(s)	258, 369, 636, 682
FauI	CCCGC	3 cut(s)	510, 692, 844
Fnu4HI	GCNGC	1 cut(s)	93
FokI	GGATG	1 cut(s)	192
Fsp4HI	GCNGC	1 cut(s)	93
FspBI	CTAG	2 cut(s)	428, 579
FspI	TGCGCA	1 cut(s)	796
GlaI	GCGC	1 cut(s)	796
GluI	GCNGC	1 cut(s)	93
GsaI	CCCAGC	1 cut(s)	339
GsuI	CTGGAG	1 cut(s)	715
HaeIII	GGCC	1 cut(s)	40
HapII	CCGG	1 cut(s)	447
HhaI	GCGC	1 cut(s)	797
Hin1II	CATG	4 cut(s)	262, 373, 640, 686
Hin6I	GCGC	1 cut(s)	795
HinP1I	GCGC	1 cut(s)	795
HincII	GTYRAC	1 cut(s)	481
HindII	GTYRAC	1 cut(s)	481
HindIII	AAGCTT	1 cut(s)	975
HinfI	GANTC	3 cut(s)	124, 596, 809
HpaII	CCGG	1 cut(s)	447
HphI	GGTGA	3 cut(s)	557, 605, 698
Hpy166II	GTNNAC	1 cut(s)	481
Hpy188I	TCNGA	3 cut(s)	150, 526, 612
Hpy188III	TCNNGA	5 cut(s)	116, 284, 396, 694, 740
Hpy8I	GTNNAC	1 cut(s)	481
HpyAV	CCTTC	2 cut(s)	128, 414
HpyCH4III	ACNGT	1 cut(s)	672
HpyCH4V	TGCA	4 cut(s)	95, 183, 194, 439
HpyF10VI	GCNNNNNNNGC	1 cut(s)	92
HpyF3I	CTNAG	3 cut(s)	17, 147, 432
Hsp92II	CATG	4 cut(s)	262, 373, 640, 686
HspAI	GCGC	1 cut(s)	795
Kzo9I	GATC	9 cut(s)	106, 356, 392, 507, 583, 688, 742, 871, 929
LmnI	GCTCC	1 cut(s)	696
Lsp1109I	GCAGC	1 cut(s)	79
LweI	GCATC	4 cut(s)	170, 202, 426, 957
MaeI	CTAG	2 cut(s)	428, 579
MaeIII	GTNAC	4 cut(s)	560, 593, 678, 752
MalI	GATC	9 cut(s)	108, 358, 394, 509, 585, 690, 744, 873, 931
MbiI	CCGCTC	1 cut(s)	699
MboI	GATC	9 cut(s)	106, 356, 392, 507, 583, 688, 742, 871, 929
MboII	GAAGA	7 cut(s)	38, 41, 44, 217, 513, 562, 874
MflI	RGATCY	3 cut(s)	106, 356, 871
MluCI	AATT	5 cut(s)	77, 111, 341, 413, 536
MlyI	GAGTC	1 cut(s)	590
Mph1103I	ATGCAT	2 cut(s)	185, 441
MroXI	GAANNNNTTC	1 cut(s)	123
MseI	TTAA	4 cut(s)	186, 231, 570, 979
MspCI	CTTAAG	1 cut(s)	569
MspI	CCGG	1 cut(s)	447
MspR9I	CCNGG	1 cut(s)	448
MwoI	GCNNNNNNNGC	1 cut(s)	92
NciI	CCSGG	1 cut(s)	448
NdeII	GATC	9 cut(s)	106, 356, 392, 507, 583, 688, 742, 871, 929
NheI	GCTAGC	1 cut(s)	427
NlaIII	CATG	4 cut(s)	262, 373, 640, 686
NlaIV	GGNNCC	2 cut(s)	108, 642
NmeAIII	GCCGAG	1 cut(s)	16
NmuCI	GTSAC	1 cut(s)	593
NsbI	TGCGCA	1 cut(s)	796
NsiI	ATGCAT	2 cut(s)	185, 441
NspV	TTCGAA	1 cut(s)	458
PdmI	GAANNNNTTC	1 cut(s)	123
PfeI	GAWTC	2 cut(s)	124, 809
PflMI	CCANNNNNTGG	1 cut(s)	353
PkrI	GCNGC	1 cut(s)	94
PleI	GAGTC	1 cut(s)	590
PpsI	GAGTC	1 cut(s)	590
PshBI	ATTAAT	1 cut(s)	186
PsiI	TTATAA	1 cut(s)	906
PspEI	GGTNACC	1 cut(s)	560
PspFI	CCCAGC	1 cut(s)	335
PspN4I	GGNNCC	2 cut(s)	108, 642
PspPI	GGNCC	1 cut(s)	251
PsuI	RGATCY	3 cut(s)	106, 356, 871
RsaI	GTAC	1 cut(s)	499
RsaNI	GTAC	1 cut(s)	498
SaqAI	TTAA	4 cut(s)	186, 231, 570, 979
SatI	GCNGC	1 cut(s)	93
Sau3AI	GATC	9 cut(s)	106, 356, 392, 507, 583, 688, 742, 871, 929
Sau96I	GGNCC	1 cut(s)	251
SchI	GAGTC	1 cut(s)	590
ScrFI	CCNGG	1 cut(s)	448
SfaNI	GCATC	4 cut(s)	170, 202, 426, 957
SfuI	TTCGAA	1 cut(s)	458
SinI	GGWCC	1 cut(s)	251
SmlI	CTYRAG	2 cut(s)	284, 569
SmoI	CTYRAG	2 cut(s)	284, 569
Sse9I	AATT	5 cut(s)	77, 111, 341, 413, 536
SsiI	CCGC	5 cut(s)	5, 503, 699, 773, 851
SspMI	CTAG	2 cut(s)	428, 579
StyD4I	CCNGG	1 cut(s)	446
TaaI	ACNGT	1 cut(s)	672
TaqI	TCGA	3 cut(s)	70, 458, 951
TasI	AATT	5 cut(s)	77, 111, 341, 413, 536
TfiI	GAWTC	2 cut(s)	124, 809
Tru1I	TTAA	4 cut(s)	186, 231, 570, 979
Tru9I	TTAA	4 cut(s)	186, 231, 570, 979
TscAI	CASTG	1 cut(s)	630
TseFI	GTSAC	1 cut(s)	593
TseI	GCWGC	1 cut(s)	92
Tsp45I	GTSAC	1 cut(s)	593
TspDTI	ATGAA	1 cut(s)	312
TspGWI	ACGGA	2 cut(s)	302, 979
TspRI	CASTG	1 cut(s)	630
Van91I	CCANNNNNTGG	1 cut(s)	353
Vha464I	CTTAAG	1 cut(s)	569
VpaK11BI	GGWCC	1 cut(s)	251
VspI	ATTAAT	1 cut(s)	186
XapI	RAATTY	2 cut(s)	77, 536
XcmI	CCANNNNNNNNNTGG	1 cut(s)	117
XmnI	GAANNNNTTC	1 cut(s)	123
XspI	CTAG	2 cut(s)	428, 579
Zsp2I	ATGCAT	2 cut(s)	185, 441

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.