Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0005372

Physical Location & Seq

Genomic Coordinates Forward (+)

18376343 .. 18386619

Gene Structure 10277 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1128500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 996 bp

ATGGTGGCACATGTGGGACTCATATCGCTCTTTTCTCCTTGCTTTCCTTCTCCGACTCGTCTTCCTCGTCTCCCCTCCTCCAAGCACAGACCTTTTACTACCATGGCGGCACTGAGTGATGATCCGGTTCGTGAATGGATTCTCTCAGAAGGAAATGCAACACAGATAACAAGAATTAGTCCTGTAGGGGGCGGCTGCATCAATCGTGCTAATCGTTACGACACTGATGCTGGTTCTTTCTTTGTTAAAACAAACAGGAGCATTGGGCCATCGATGTTTGAGGGAGAGGCTCTTGGTTTAGGTGCCATGTATGAAACTGGGTCAATTCGTGTCCCTAAGCCATTCAAGTTCGGGCCCCTACCTACTGGTGGGTCTTACATCATTATGGAATTTATCGAATTTGGTTCATTTAGAGGTAATCAGTCTGTTCTAGGCAGGAAGCTTGCTGAAATGCATAAAGCTGGAAAATCTGAAAAAGGTTTTGGTTTTGAAGTTGACAACACTGTAGGCAGCACTCCACAGATAAACACTTGGTCATCAGATTGGATTCAGTTCTATGGGGAGCATAGACTGGGTTATCAGTTGCAGCTGGCATTAGACCAGTACGGTGATAGTACCATATATGAAAAAGGACAAAGATTGATTAAGAGTATGGGATCGCTCTTTGATAACATAGCAATAGAGCCATGTTTGTTACATGGGGACTTATGGAGCGGAAATATCAGCGCTGATAAGAATGGCGAGCCTGTTATACTTGATCCAGCATGTTACTATGGACATAACGAGGCAGAATTTGGAATGTCGTGGTGTGCTGGCTTTGGAGGATCTTTCTACAGTTCCTATTTCGAGGTGATGCCAAAACAACCAGGATTTGATAAGAGGAAGGAGTTATATCTGTTGTATCATTACTTGAATCATTATAACCTCTTTGGTTCGGGTTATCGTTCATCTTCAATGTCTATAATAGACGATTATCTTCGGATGTTGAAAGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Fructosamin_kin

Protein Analysis

332

Amino Acids

36.85

Weight (kDa)

6.45

Isoelectric Point (pI)

48.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Fructosamin_kin	PF03881	47 - 327	7.7e-98	Fructosamine kinase
APH	PF01636	59 - 269	1.4e-06	Phosphotransferase enzyme family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005372)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G61080 AT3G61080
fragaria_vesca	FvH4_7g13130 FvH4_7g13130 FvH4_7g13130 FvH4_7g13130 FvH4_7g13130
malus_domestica	MD07G1128500.v1.1
prunus_persica	Prupe.2G154600_v2.0.a1 Prupe.2G154600_v2.0.a1 Prupe.2G154600_v2.0.a1 Prupe.2G154600_v2.0.a1 Prupe.2G154600_v2.0.a1 Prupe.2G154600_v2.0.a1 Prupe.2G154600_v2.0.a1 Prupe.2G154600_v2.0.a1
pyrus_communis	pycom07g12430
rosa_chinensis	RchiOBHm_Chr1g0352261
rosa_laevigata	RLG00000028346
rosa_multiflora	Rmu_sc0011915.1_g000001
rosa_roxburghii	Rroxscaffold_4G00303060
rosa_rugosa	Rorug01G0226200 Rorug01G0226300 Rorug01G0226300
rosa_samantha	Rh1AG240600 Rh1BG211500 Rh1CG224400 Rh1DG237900
rosa_wichuraiana	Rw1G020840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	921
AccB1I	GGYRCC	1 cut(s)	302
AccBSI	CCGCTC	1 cut(s)	714
AciI	CCGC	3 cut(s)	107, 192, 714
AclWI	GGATC	4 cut(s)	116, 664, 752, 832
AcsI	RAATTY	3 cut(s)	389, 398, 791
AdeI	CACNNNGTG	1 cut(s)	116
AfaI	GTAC	2 cut(s)	605, 616
AfeI	AGCGCT	1 cut(s)	727
AfiI	CCNNNNNNNGG	2 cut(s)	188, 368
AflIII	ACRYGT	1 cut(s)	10
AgsI	TTSAA	5 cut(s)	346, 491, 913, 954, 988
AjnI	CCWGG	1 cut(s)	865
AjuI	GAANNNNNNNTTGG	2 cut(s)	465, 497
AluBI	AGCT	4 cut(s)	442, 461, 589, 992
AluI	AGCT	4 cut(s)	442, 461, 589, 992
Alw26I	GTCTC	1 cut(s)	74
AlwI	GGATC	4 cut(s)	116, 664, 752, 832
Aor51HI	AGCGCT	1 cut(s)	727
AoxI	GGCC	2 cut(s)	266, 353
ApaI	GGGCCC	1 cut(s)	357
ApeKI	GCWGC	3 cut(s)	195, 510, 586
ApoI	RAATTY	3 cut(s)	389, 398, 791
Asp700I	GAANNNNTTC	1 cut(s)	138
AspLEI	GCGC	1 cut(s)	728
AspS9I	GGNCC	3 cut(s)	266, 353, 354
AsuHPI	GGTGA	2 cut(s)	620, 862
BaeGI	GKGCMC	1 cut(s)	357
BanI	GGYRCC	1 cut(s)	302
BanII	GRGCYC	1 cut(s)	357
BbsI	GAAGAC	1 cut(s)	53
BbvI	GCAGC	3 cut(s)	182, 522, 598
BccI	CCATC	1 cut(s)	277
BcgI	CGANNNNNNTGC	2 cut(s)	209, 243
BciT130I	CCWGG	1 cut(s)	867
BcoDI	GTCTC	1 cut(s)	74
BfaI	CTAG	1 cut(s)	431
BfmI	CTRYAG	3 cut(s)	183, 504, 832
BfoI	RGCGCY	1 cut(s)	729
BisI	GCNGC	5 cut(s)	108, 193, 196, 511, 587
BlsI	GCNGC	5 cut(s)	109, 194, 197, 512, 588
Bme1390I	CCNGG	1 cut(s)	867
BmgT120I	GGNCC	3 cut(s)	266, 353, 354
BmiI	GGNNCC	3 cut(s)	304, 355, 356
BmrFI	CCNGG	1 cut(s)	867
BmrI	ACTGGG	2 cut(s)	327, 581
BmsI	GCATC	3 cut(s)	207, 217, 843
BmuI	ACTGGG	2 cut(s)	327, 581
BpiI	GAAGAC	1 cut(s)	53
Bpu10I	CCTNAGC	1 cut(s)	336
Bsa29I	ATCGAT	1 cut(s)	272
BsaJI	CCNNGG	1 cut(s)	102
BsaWI	WCCGGW	1 cut(s)	124
Bsc4I	CCNNNNNNNGG	2 cut(s)	188, 368
Bse1I	ACTGG	4 cut(s)	322, 370, 576, 601
BseBI	CCWGG	1 cut(s)	867
BseCI	ATCGAT	1 cut(s)	272
BseDI	CCNNGG	1 cut(s)	102
BseGI	GGATG	1 cut(s)	987
BseLI	CCNNNNNNNGG	2 cut(s)	188, 368
BseMII	CTCAG	2 cut(s)	104, 159
BseNI	ACTGG	4 cut(s)	322, 370, 576, 601
BseRI	GAGGAG	1 cut(s)	67
BseSI	GKGCMC	1 cut(s)	357
BseXI	GCAGC	3 cut(s)	182, 522, 598
BshFI	GGCC	2 cut(s)	268, 355
BshNI	GGYRCC	1 cut(s)	302
BshVI	ATCGAT	1 cut(s)	272
BsiSI	CCGG	1 cut(s)	125
BslFI	GGGAC	3 cut(s)	30, 317, 716
BslI	CCNNNNNNNGG	2 cut(s)	188, 368
BsmAI	GTCTC	1 cut(s)	74
BsmBI	CGTCTC	1 cut(s)	74
BsmFI	GGGAC	3 cut(s)	30, 317, 716
BsnI	GGCC	2 cut(s)	268, 355
Bsp120I	GGGCCC	1 cut(s)	353
Bsp1286I	GDGCHC	1 cut(s)	357
Bsp143I	GATC	4 cut(s)	121, 656, 757, 824
Bsp19I	CCATGG	1 cut(s)	102
BspACI	CCGC	3 cut(s)	107, 192, 714
BspANI	GGCC	2 cut(s)	268, 355
BspCNI	CTCAG	2 cut(s)	105, 158
BspDI	ATCGAT	1 cut(s)	272
BspLI	GGNNCC	3 cut(s)	304, 355, 356
BspPI	GGATC	4 cut(s)	116, 664, 752, 832
BspT107I	GGYRCC	1 cut(s)	302
BsrBI	CCGCTC	1 cut(s)	714
BsrI	ACTGG	4 cut(s)	322, 370, 576, 601
BssECI	CCNNGG	1 cut(s)	102
BssMI	GATC	4 cut(s)	121, 656, 757, 824
BssT1I	CCWWGG	1 cut(s)	102
Bst2UI	CCWGG	1 cut(s)	867
Bst4CI	ACNGT	3 cut(s)	505, 608, 836
BstC8I	GCNNGC	4 cut(s)	444, 591, 743, 814
BstDEI	CTNAG	4 cut(s)	113, 145, 336, 993
BstDSI	CCRYGG	1 cut(s)	102
BstF5I	GGATG	1 cut(s)	987
BstH2I	RGCGCY	1 cut(s)	729
BstHHI	GCGC	1 cut(s)	728
BstKTI	GATC	4 cut(s)	124, 659, 760, 827
BstMAI	GTCTC	1 cut(s)	74
BstMBI	GATC	4 cut(s)	121, 656, 757, 824
BstNI	CCWGG	1 cut(s)	867
BstNSI	RCATGY	2 cut(s)	14, 768
BstSCI	CCNGG	1 cut(s)	865
BstSFI	CTRYAG	3 cut(s)	183, 504, 832
BstSLI	GKGCMC	1 cut(s)	357
BstV1I	GCAGC	3 cut(s)	182, 522, 598
BstV2I	GAAGAC	1 cut(s)	53
BstX2I	RGATCY	1 cut(s)	824
BstYI	RGATCY	1 cut(s)	824
Bsu15I	ATCGAT	1 cut(s)	272
BsuRI	GGCC	2 cut(s)	268, 355
BsuTUI	ATCGAT	1 cut(s)	272
BtgI	CCRYGG	1 cut(s)	102
BtsCI	GGATG	1 cut(s)	987
BtsIMutI	CAGTG	3 cut(s)	110, 222, 501
Cac8I	GCNNGC	4 cut(s)	444, 591, 743, 814
CfoI	GCGC	1 cut(s)	728
Cfr13I	GGNCC	3 cut(s)	266, 353, 354
ClaI	ATCGAT	1 cut(s)	272
Csp6I	GTAC	2 cut(s)	604, 615
CviAII	CATG	6 cut(s)	11, 103, 307, 687, 698, 765
CviQI	GTAC	2 cut(s)	604, 615
DdeI	CTNAG	4 cut(s)	113, 145, 336, 993
DpnI	GATC	4 cut(s)	123, 658, 759, 826
DpnII	GATC	4 cut(s)	121, 656, 757, 824
DraIII	CACNNNGTG	1 cut(s)	116
Eco130I	CCWWGG	1 cut(s)	102
Eco24I	GRGCYC	1 cut(s)	357
Eco47III	AGCGCT	1 cut(s)	727
EcoO109I	RGGNCCY	1 cut(s)	354
EcoRII	CCWGG	1 cut(s)	865
EcoT14I	CCWWGG	1 cut(s)	102
EcoT22I	ATGCAT	1 cut(s)	456
EcoT38I	GRGCYC	1 cut(s)	357
ErhI	CCWWGG	1 cut(s)	102
Esp3I	CGTCTC	1 cut(s)	74
FaeI	CATG	6 cut(s)	14, 106, 310, 690, 701, 768
FaqI	GGGAC	3 cut(s)	30, 317, 716
FatI	CATG	6 cut(s)	10, 102, 306, 686, 697, 764
Fnu4HI	GCNGC	5 cut(s)	108, 193, 196, 511, 587
FriOI	GRGCYC	1 cut(s)	357
Fsp4HI	GCNGC	5 cut(s)	108, 193, 196, 511, 587
FspBI	CTAG	1 cut(s)	431
GlaI	GCGC	1 cut(s)	727
GluI	GCNGC	5 cut(s)	108, 193, 196, 511, 587
HaeII	RGCGCY	1 cut(s)	729
HaeIII	GGCC	2 cut(s)	268, 355
HapII	CCGG	1 cut(s)	125
HhaI	GCGC	1 cut(s)	728
Hin1II	CATG	6 cut(s)	14, 106, 310, 690, 701, 768
Hin6I	GCGC	1 cut(s)	726
HinP1I	GCGC	1 cut(s)	726
HincII	GTYRAC	1 cut(s)	496
HindII	GTYRAC	1 cut(s)	496
HindIII	AAGCTT	2 cut(s)	440, 990
HinfI	GANTC	5 cut(s)	18, 55, 139, 547, 913
HpaII	CCGG	1 cut(s)	125
HphI	GGTGA	2 cut(s)	620, 862
Hpy166II	GTNNAC	1 cut(s)	496
Hpy188I	TCNGA	5 cut(s)	54, 148, 472, 541, 981
Hpy188III	TCNNGA	1 cut(s)	131
Hpy8I	GTNNAC	1 cut(s)	496
HpyAV	CCTTC	3 cut(s)	57, 143, 877
HpyCH4III	ACNGT	3 cut(s)	505, 608, 836
HpyCH4V	TGCA	4 cut(s)	158, 198, 454, 586
HpyF3I	CTNAG	4 cut(s)	113, 145, 336, 993
Hsp92II	CATG	6 cut(s)	14, 106, 310, 690, 701, 768
HspAI	GCGC	1 cut(s)	726
Kzo9I	GATC	4 cut(s)	121, 656, 757, 824
LmnI	GCTCC	3 cut(s)	258, 562, 711
Lsp1109I	GCAGC	3 cut(s)	182, 522, 598
LweI	GCATC	3 cut(s)	207, 217, 843
MaeI	CTAG	1 cut(s)	431
MaeIII	GTNAC	3 cut(s)	215, 693, 767
MalI	GATC	4 cut(s)	123, 658, 759, 826
MbiI	CCGCTC	1 cut(s)	714
MboI	GATC	4 cut(s)	121, 656, 757, 824
MboII	GAAGA	3 cut(s)	53, 942, 968
MflI	RGATCY	1 cut(s)	824
MhlI	GDGCHC	1 cut(s)	357
MluCI	AATT	5 cut(s)	174, 324, 389, 398, 791
MlyI	GAGTC	2 cut(s)	12, 49
MmeI	TCCRAC	1 cut(s)	77
Mph1103I	ATGCAT	1 cut(s)	456
MroXI	GAANNNNTTC	1 cut(s)	138
MseI	TTAA	2 cut(s)	246, 645
MslI	CAYNNNNRTG	1 cut(s)	383
MspA1I	CMGCKG	1 cut(s)	589
MspI	CCGG	1 cut(s)	125
MspR9I	CCNGG	1 cut(s)	867
MvaI	CCWGG	1 cut(s)	867
NcoI	CCATGG	1 cut(s)	102
NdeII	GATC	4 cut(s)	121, 656, 757, 824
NlaIII	CATG	6 cut(s)	14, 106, 310, 690, 701, 768
NlaIV	GGNNCC	3 cut(s)	304, 355, 356
NsiI	ATGCAT	1 cut(s)	456
NspI	RCATGY	2 cut(s)	14, 768
PciI	ACATGT	1 cut(s)	10
PcsI	WCGNNNNNNNCGW	2 cut(s)	64, 211
PdmI	GAANNNNTTC	1 cut(s)	138
PfeI	GAWTC	3 cut(s)	139, 547, 913
PkrI	GCNGC	5 cut(s)	109, 194, 197, 512, 588
PleI	GAGTC	2 cut(s)	12, 49
PpsI	GAGTC	2 cut(s)	12, 49
PscI	ACATGT	1 cut(s)	10
PsiI	TTATAA	1 cut(s)	921
Psp6I	CCWGG	1 cut(s)	865
PspGI	CCWGG	1 cut(s)	865
PspN4I	GGNNCC	3 cut(s)	304, 355, 356
PspOMI	GGGCCC	1 cut(s)	353
PspPI	GGNCC	3 cut(s)	266, 353, 354
PsuI	RGATCY	1 cut(s)	824
PvuII	CAGCTG	1 cut(s)	589
RsaI	GTAC	2 cut(s)	605, 616
RsaNI	GTAC	2 cut(s)	604, 615
RseI	CAYNNNNRTG	1 cut(s)	383
SaqAI	TTAA	2 cut(s)	246, 645
SatI	GCNGC	5 cut(s)	108, 193, 196, 511, 587
Sau3AI	GATC	4 cut(s)	121, 656, 757, 824
Sau96I	GGNCC	3 cut(s)	266, 353, 354
SchI	GAGTC	2 cut(s)	12, 49
ScrFI	CCNGG	1 cut(s)	867
SduI	GDGCHC	1 cut(s)	357
SfaNI	GCATC	3 cut(s)	207, 217, 843
SfcI	CTRYAG	3 cut(s)	183, 504, 832
SmiMI	CAYNNNNRTG	1 cut(s)	383
Sse9I	AATT	5 cut(s)	174, 324, 389, 398, 791
SsiI	CCGC	3 cut(s)	107, 192, 714
SspMI	CTAG	1 cut(s)	431
StyD4I	CCNGG	1 cut(s)	865
StyI	CCWWGG	1 cut(s)	102
TaaI	ACNGT	3 cut(s)	505, 608, 836
TaqI	TCGA	3 cut(s)	272, 396, 846
TasI	AATT	5 cut(s)	174, 324, 389, 398, 791
TauI	GCSGC	2 cut(s)	110, 195
TfiI	GAWTC	3 cut(s)	139, 547, 913
Tru1I	TTAA	2 cut(s)	246, 645
Tru9I	TTAA	2 cut(s)	246, 645
TscAI	CASTG	3 cut(s)	117, 229, 508
TseI	GCWGC	3 cut(s)	195, 510, 586
TspDTI	ATGAA	4 cut(s)	327, 396, 639, 936
TspRI	CASTG	3 cut(s)	117, 229, 508
XapI	RAATTY	3 cut(s)	389, 398, 791
XceI	RCATGY	2 cut(s)	14, 768
XmnI	GAANNNNTTC	1 cut(s)	138
XspI	CTAG	1 cut(s)	431
Zsp2I	ATGCAT	1 cut(s)	456

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.