Prupe.2G154600_v2.0.a1

Protein-ribulosamine 3-kinase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
20830484 .. 20834113
3630 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G154600.7

Sequence Viewer

Length: 993 bp
ATGTTGGTACACGTTGGGCTCTTACCGCTCTCTTCCTCTTGCTTACCTTCTCTGCCTCGCCTTCCTCGACTGTCCTCCACCAAGCACAGAACTTTTGCCATGGCGGTGGTGAGTGAGGATCCGGTTCGTGAATGGATTCTCTCAGAAGGAAATGCAACACAGATAACAAGAATTAGTCCAGTAGGAGGAGGTTGCATCAATCGTGCAAGTCATTATGACACTGATGCGGGTTCTTTCTTTGTCAAAACAAACAGGAGCATTGGGCCATCGATGTTTGAGGGAGAGGCTCTTGGTTTAGGTGCCATGTTTGAAACTGGAACAATTCGTGTCCCTAAGCCATTCAAGTTTGGGCCCCTACCTACTGGTGGTTCTTACATCATTATGGAATTTATTGAATTTGGTTCACGTAGAAGTAATCAGTCTGTGCTAGGCAGGAAGCTTGCTGAAATGCATAAAGCTGGAAAATCTGAAAAAGGTTTTGGTTTTGAAGTTAACAACACTGTAGGCAGTACTCCGCAGATAAACACTTGGTCATCAGATTGGATTCAGTTTTATGGGGAGCATAGACTGGGTTATCAGTTGCAGCTGGCACTGGACCAGTATGGTGATAGTACCATTTATGAAAAAGGACAAAGATTGGTGAAGAGTATGGGACCTTTCTTTGATAATGTAGTGATTGAGCCATGCTTGTTACATGGGGACTTATGGAGCGGAAATATCAGCTCTGACAAGAATGGCGAGCCTGTTATACTTGACCCAGCATGTTACTATGGACATAGTGAGGCAGAATTTGGAATGTCATGGTGTGCTGGTTTTGGAGGATCTTTCTACAGTTCCTATTTCGAGGTGATGCCCAAACAACCAGGGTTTGAGAAGAGGAAAGATCTTTATATGTTGTATCATTACTTGAATCACTATAACCTCTTCGGTTCGGGTTATCGTTCATCTGCAATGTCTATAATAGATGACTATCTTCGGATGTTAAAAGCTTAG

Protein Analysis

331

Amino Acids

36.74

Weight (kDa)

6.76

Isoelectric Point (pI)

55.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 299
AccBSI CCGCTC 2 cut(s) 28, 711
AciI CCGC 5 cut(s) 26, 104, 227, 515, 711
AclWI GGATC 3 cut(s) 113, 126, 829
AcsI RAATTY 3 cut(s) 386, 395, 788
AfaI GTAC 3 cut(s) 9, 511, 613
AfiI CCNNNNNNNGG 2 cut(s) 185, 365
AflIII ACRYGT 1 cut(s) 10
AgsI TTSAA 5 cut(s) 311, 343, 395, 488, 910
AjnI CCWGG 1 cut(s) 862
AjuI GAANNNNNNNTTGG 2 cut(s) 462, 494
AluBI AGCT 5 cut(s) 439, 458, 586, 723, 989
AluI AGCT 5 cut(s) 439, 458, 586, 723, 989
AlwI GGATC 3 cut(s) 113, 126, 829
AoxI GGCC 2 cut(s) 263, 350
ApaI GGGCCC 1 cut(s) 354
ApeKI GCWGC 1 cut(s) 583
ApoI RAATTY 3 cut(s) 386, 395, 788
Asp700I GAANNNNTTC 1 cut(s) 135
AspS9I GGNCC 5 cut(s) 263, 350, 351, 595, 653
AsuHPI GGTGA 4 cut(s) 121, 617, 652, 859
AvaII GGWCC 2 cut(s) 595, 653
BaeGI GKGCMC 1 cut(s) 354
BamHI GGATCC 1 cut(s) 118
BanI GGYRCC 1 cut(s) 299
BanII GRGCYC 2 cut(s) 21, 354
BbvI GCAGC 1 cut(s) 595
BccI CCATC 1 cut(s) 274
BciT130I CCWGG 1 cut(s) 864
BfaI CTAG 1 cut(s) 428
BfmI CTRYAG 2 cut(s) 501, 829
BglII AGATCT 1 cut(s) 883
BisI GCNGC 1 cut(s) 584
BlsI GCNGC 1 cut(s) 585
BmcAI AGTACT 1 cut(s) 511
Bme1390I CCNGG 1 cut(s) 864
Bme18I GGWCC 2 cut(s) 595, 653
BmgT120I GGNCC 5 cut(s) 263, 350, 351, 595, 653
BmiI GGNNCC 5 cut(s) 120, 301, 352, 353, 654
BmrFI CCNGG 1 cut(s) 864
BmrI ACTGGG 1 cut(s) 578
BmsI GCATC 3 cut(s) 204, 214, 840
BmuI ACTGGG 1 cut(s) 578
Bpu10I CCTNAGC 1 cut(s) 333
Bsa29I ATCGAT 1 cut(s) 269
BsaAI YACGTR 1 cut(s) 407
BsaBI GATNNNNATC 1 cut(s) 969
BsaJI CCNNGG 2 cut(s) 99, 863
BsaWI WCCGGW 1 cut(s) 121
Bsc4I CCNNNNNNNGG 2 cut(s) 185, 365
Bse1I ACTGG 6 cut(s) 179, 319, 367, 573, 597, 598
Bse3DI GCAATG 1 cut(s) 957
Bse8I GATNNNNATC 1 cut(s) 969
BseBI CCWGG 1 cut(s) 864
BseCI ATCGAT 1 cut(s) 269
BseDI CCNNGG 2 cut(s) 99, 863
BseGI GGATG 1 cut(s) 984
BseJI GATNNNNATC 1 cut(s) 969
BseLI CCNNNNNNNGG 2 cut(s) 185, 365
BseMI GCAATG 1 cut(s) 957
BseMII CTCAG 1 cut(s) 156
BseNI ACTGG 6 cut(s) 179, 319, 367, 573, 597, 598
BseRI GAGGAG 1 cut(s) 201
BseSI GKGCMC 1 cut(s) 354
BseXI GCAGC 1 cut(s) 595
BseYI CCCAGC 1 cut(s) 757
BshFI GGCC 2 cut(s) 265, 352
BshNI GGYRCC 1 cut(s) 299
BshVI ATCGAT 1 cut(s) 269
BsiSI CCGG 1 cut(s) 122
BslFI GGGAC 3 cut(s) 314, 666, 713
BslI CCNNNNNNNGG 2 cut(s) 185, 365
BsmFI GGGAC 3 cut(s) 314, 666, 713
BsnI GGCC 2 cut(s) 265, 352
Bsp120I GGGCCC 1 cut(s) 350
Bsp1286I GDGCHC 2 cut(s) 21, 354
Bsp143I GATC 3 cut(s) 118, 821, 883
Bsp19I CCATGG 1 cut(s) 99
BspACI CCGC 5 cut(s) 26, 104, 227, 515, 711
BspANI GGCC 2 cut(s) 265, 352
BspCNI CTCAG 1 cut(s) 155
BspDI ATCGAT 1 cut(s) 269
BspLI GGNNCC 5 cut(s) 120, 301, 352, 353, 654
BspPI GGATC 3 cut(s) 113, 126, 829
BspT107I GGYRCC 1 cut(s) 299
BsrBI CCGCTC 2 cut(s) 28, 711
BsrDI GCAATG 1 cut(s) 957
BsrI ACTGG 6 cut(s) 179, 319, 367, 573, 597, 598
BssECI CCNNGG 2 cut(s) 99, 863
BssMI GATC 3 cut(s) 118, 821, 883
BssT1I CCWWGG 1 cut(s) 99
Bst2UI CCWGG 1 cut(s) 864
Bst4CI ACNGT 3 cut(s) 72, 502, 833
Bst6I CTCTTC 4 cut(s) 37, 638, 869, 929
BstBAI YACGTR 1 cut(s) 407
BstC8I GCNNGC 3 cut(s) 441, 588, 740
BstDEI CTNAG 3 cut(s) 142, 333, 990
BstDSI CCRYGG 1 cut(s) 99
BstF5I GGATG 1 cut(s) 984
BstKTI GATC 3 cut(s) 121, 824, 886
BstMBI GATC 3 cut(s) 118, 821, 883
BstMWI GCNNNNNNNGC 1 cut(s) 25
BstNI CCWGG 1 cut(s) 864
BstNSI RCATGY 1 cut(s) 765
BstSCI CCNGG 1 cut(s) 862
BstSFI CTRYAG 2 cut(s) 501, 829
BstSLI GKGCMC 1 cut(s) 354
BstV1I GCAGC 1 cut(s) 595
BstX2I RGATCY 3 cut(s) 118, 821, 883
BstXI CCANNNNNNTGG 1 cut(s) 106
BstYI RGATCY 3 cut(s) 118, 821, 883
Bsu15I ATCGAT 1 cut(s) 269
BsuRI GGCC 2 cut(s) 265, 352
BsuTUI ATCGAT 1 cut(s) 269
BtgI CCRYGG 1 cut(s) 99
BtsCI GGATG 1 cut(s) 984
BtsIMutI CAGTG 3 cut(s) 219, 498, 590
Cac8I GCNNGC 3 cut(s) 441, 588, 740
Cfr13I GGNCC 5 cut(s) 263, 350, 351, 595, 653
ClaI ATCGAT 1 cut(s) 269
Csp6I GTAC 3 cut(s) 8, 510, 612
CviAII CATG 6 cut(s) 100, 304, 684, 695, 762, 801
CviQI GTAC 3 cut(s) 8, 510, 612
DdeI CTNAG 3 cut(s) 142, 333, 990
DpnI GATC 3 cut(s) 120, 823, 885
DpnII GATC 3 cut(s) 118, 821, 883
Eam1104I CTCTTC 4 cut(s) 37, 638, 869, 929
EarI CTCTTC 4 cut(s) 37, 638, 869, 929
Eco130I CCWWGG 1 cut(s) 99
Eco24I GRGCYC 2 cut(s) 21, 354
Eco47I GGWCC 2 cut(s) 595, 653
EcoO109I RGGNCCY 2 cut(s) 351, 653
EcoRII CCWGG 1 cut(s) 862
EcoT14I CCWWGG 1 cut(s) 99
EcoT22I ATGCAT 1 cut(s) 453
EcoT38I GRGCYC 2 cut(s) 21, 354
ErhI CCWWGG 1 cut(s) 99
FaeI CATG 6 cut(s) 103, 307, 687, 698, 765, 804
FaqI GGGAC 3 cut(s) 314, 666, 713
FatI CATG 6 cut(s) 99, 303, 683, 694, 761, 800
FauI CCCGC 1 cut(s) 220
Fnu4HI GCNGC 1 cut(s) 584
FriOI GRGCYC 2 cut(s) 21, 354
Fsp4HI GCNGC 1 cut(s) 584
FspBI CTAG 1 cut(s) 428
GluI GCNGC 1 cut(s) 584
GsaI CCCAGC 1 cut(s) 761
HaeIII GGCC 2 cut(s) 265, 352
HapII CCGG 1 cut(s) 122
Hin1II CATG 6 cut(s) 103, 307, 687, 698, 765, 804
HincII GTYRAC 1 cut(s) 493
HindII GTYRAC 1 cut(s) 493
HindIII AAGCTT 2 cut(s) 437, 987
HinfI GANTC 3 cut(s) 136, 544, 910
HpaI GTTAAC 1 cut(s) 493
HpaII CCGG 1 cut(s) 122
HphI GGTGA 4 cut(s) 121, 617, 652, 859
Hpy166II GTNNAC 3 cut(s) 10, 404, 493
Hpy188I TCNGA 5 cut(s) 145, 469, 538, 727, 978
Hpy188III TCNNGA 1 cut(s) 128
Hpy8I GTNNAC 3 cut(s) 10, 404, 493
HpyAV CCTTC 3 cut(s) 57, 71, 140
HpyCH4III ACNGT 3 cut(s) 72, 502, 833
HpyCH4IV ACGT 2 cut(s) 12, 406
HpyCH4V TGCA 6 cut(s) 155, 195, 206, 451, 583, 950
HpyF10VI GCNNNNNNNGC 1 cut(s) 25
HpyF3I CTNAG 3 cut(s) 142, 333, 990
HpySE526I ACGT 2 cut(s) 12, 406
Hsp92II CATG 6 cut(s) 103, 307, 687, 698, 765, 804
KspAI GTTAAC 1 cut(s) 493
Kzo9I GATC 3 cut(s) 118, 821, 883
LmnI GCTCC 3 cut(s) 255, 559, 708
Lsp1109I GCAGC 1 cut(s) 595
LweI GCATC 3 cut(s) 204, 214, 840
MaeI CTAG 1 cut(s) 428
MaeII ACGT 2 cut(s) 12, 406
MaeIII GTNAC 2 cut(s) 690, 764
MalI GATC 3 cut(s) 120, 823, 885
MbiI CCGCTC 2 cut(s) 28, 711
MboI GATC 3 cut(s) 118, 821, 883
MboII GAAGA 5 cut(s) 24, 655, 886, 916, 965
MflI RGATCY 3 cut(s) 118, 821, 883
MhlI GDGCHC 2 cut(s) 21, 354
MluCI AATT 5 cut(s) 171, 321, 386, 395, 788
Mph1103I ATGCAT 1 cut(s) 453
MroXI GAANNNNTTC 1 cut(s) 135
MseI TTAA 2 cut(s) 492, 983
MslI CAYNNNNRTG 2 cut(s) 104, 380
MspA1I CMGCKG 1 cut(s) 586
MspI CCGG 1 cut(s) 122
MspR9I CCNGG 1 cut(s) 864
MvaI CCWGG 1 cut(s) 864
MwoI GCNNNNNNNGC 1 cut(s) 25
NcoI CCATGG 1 cut(s) 99
NdeII GATC 3 cut(s) 118, 821, 883
NlaIII CATG 6 cut(s) 103, 307, 687, 698, 765, 804
NlaIV GGNNCC 5 cut(s) 120, 301, 352, 353, 654
NsiI ATGCAT 1 cut(s) 453
NspI RCATGY 1 cut(s) 765
PcsI WCGNNNNNNNCGW 1 cut(s) 64
PdmI GAANNNNTTC 1 cut(s) 135
PfeI GAWTC 3 cut(s) 136, 544, 910
PkrI GCNGC 1 cut(s) 585
Ppu21I YACGTR 1 cut(s) 407
PpuMI RGGWCCY 1 cut(s) 653
Psp5II RGGWCCY 1 cut(s) 653
Psp6I CCWGG 1 cut(s) 862
PspFI CCCAGC 1 cut(s) 757
PspGI CCWGG 1 cut(s) 862
PspN4I GGNNCC 5 cut(s) 120, 301, 352, 353, 654
PspOMI GGGCCC 1 cut(s) 350
PspPI GGNCC 5 cut(s) 263, 350, 351, 595, 653
PspPPI RGGWCCY 1 cut(s) 653
PsuI RGATCY 3 cut(s) 118, 821, 883
PvuII CAGCTG 1 cut(s) 586
RsaI GTAC 3 cut(s) 9, 511, 613
RsaNI GTAC 3 cut(s) 8, 510, 612
RseI CAYNNNNRTG 2 cut(s) 104, 380
SaqAI TTAA 2 cut(s) 492, 983
SatI GCNGC 1 cut(s) 584
Sau3AI GATC 3 cut(s) 118, 821, 883
Sau96I GGNCC 5 cut(s) 263, 350, 351, 595, 653
ScaI AGTACT 1 cut(s) 511
ScrFI CCNGG 1 cut(s) 864
SduI GDGCHC 2 cut(s) 21, 354
SfaNI GCATC 3 cut(s) 204, 214, 840
SfcI CTRYAG 2 cut(s) 501, 829
SinI GGWCC 2 cut(s) 595, 653
SmiMI CAYNNNNRTG 2 cut(s) 104, 380
Sse9I AATT 5 cut(s) 171, 321, 386, 395, 788
SsiI CCGC 5 cut(s) 26, 104, 227, 515, 711
SspMI CTAG 1 cut(s) 428
StyD4I CCNGG 1 cut(s) 862
StyI CCWWGG 1 cut(s) 99
TaaI ACNGT 3 cut(s) 72, 502, 833
TaiI ACGT 2 cut(s) 15, 409
TaqI TCGA 3 cut(s) 67, 269, 843
TasI AATT 5 cut(s) 171, 321, 386, 395, 788
TatI WGTACW 1 cut(s) 509
TfiI GAWTC 3 cut(s) 136, 544, 910
Tru1I TTAA 2 cut(s) 492, 983
Tru9I TTAA 2 cut(s) 492, 983
TscAI CASTG 3 cut(s) 226, 505, 597
TseI GCWGC 1 cut(s) 583
TspDTI ATGAA 2 cut(s) 636, 933
TspRI CASTG 3 cut(s) 226, 505, 597
VpaK11BI GGWCC 2 cut(s) 595, 653
XapI RAATTY 3 cut(s) 386, 395, 788
XceI RCATGY 1 cut(s) 765
XmnI GAANNNNTTC 1 cut(s) 135
XspI CTAG 1 cut(s) 428
ZrmI AGTACT 1 cut(s) 511
Zsp2I ATGCAT 1 cut(s) 453
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.