AT4G02810

Protein FANTASTIC FOUR

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0013161
Physical Location & Seq
Forward (+)
1256144 .. 1257320
1177 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G02810.1

Sequence Viewer

Length: 816 bp
ATGTCCATCGTTGTTGGCCAAGCTTACCAACATCTTCCCAAGCAAGTAAGCCAAAATCCTGACGTGGGTGGATGGAGTTTCTTGCAATATTTCTCTGAGCCAAAAGGCATTGTCCAGAACAGAGAAGACGACACAAAGAAAACAGCTTATGTCTACCCGATCGAGAAGCGTTCCGTAGCTAAACTGAGCCTTGAGATGTGCACAGAGAGCCTCGGGACCGAGAATGGGAGTGATAGTGGAGACGAGATGTCGTTACTTGCGCTTGAAGCAACCAATATTTCAAAGAGTCCTCGTCTTACTACGAAACCTCAAAAAGAAACTAGCTTCATGACCCGTGAGAACAGTTTTCCTCCGCCGCTAAACTCCGTCAACGGATTCAACAATAGCCGTATGGTGAAATCGTATAAAGAAGACGGTCGTCTTGTTGTTCAAGCAATTAGGGTTTGTTCTCCACCTCGTTGCTTTGTATCTGAACGTCGTGAAGGAAGGCTTCGTCTCTGTTTATCACAGAATTCATTGAATAGCCAAGACGCAGAAGAAGAGTTTGAAGAAGAAGATGAAGATGATCAATACGATGCAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGACGAGGAGGGCATTGTGGGGAATAATGAGAACTTTGAGGGTAAAAGTGGAAATAAAAAGGTTAGCAACAGGCCAAAAAGGAGATGCAATGAAAATGGATGTGAGCCTAAAACTATGCTTAATTGGAAGCAGCAGCAATTTTGGGTGACCACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAF

Protein Analysis

271

Amino Acids

31.2

Weight (kDa)

4.4

Isoelectric Point (pI)

81.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAF PF11250 115 - 168 1.6e-18 Fantastic Four meristem regulator
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013161)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03170 AT4G02810
fragaria_vesca FvH4_2g23620
malus_domestica MD03G1265600.v1.1 MD11G1286200.v1.1
prunus_persica Prupe.8G241400_v2.0.a1
pyrus_communis pycom11g25370
rosa_chinensis RchiOBHm_Chr6g0291081
rosa_laevigata RLG00000012146
rosa_multiflora Rmu_co8364113.1_g000001 Rmu_sc0004642.1_g000010
rosa_roxburghii Rroxscaffold_7G00176390
rosa_rugosa Rorug06G0217400
rosa_samantha Rh6AG327700 Rh6BG335200 Rh6CG341400 Rh6DG328600
rosa_wichuraiana Rw6G028500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 153
AciI CCGC 2 cut(s) 353, 356
AcoI YGGCCR 1 cut(s) 16
AcsI RAATTY 1 cut(s) 511
AfiI CCNNNNNNNGG 2 cut(s) 65, 225
AgsI TTSAA 6 cut(s) 266, 282, 379, 431, 520, 548
AhdI GACNNNNNGTC 1 cut(s) 247
AjiI CACGTC 1 cut(s) 64
AluBI AGCT 4 cut(s) 23, 146, 179, 324
AluI AGCT 4 cut(s) 23, 146, 179, 324
Alw21I GWGCWC 1 cut(s) 203
Alw26I GTCTC 2 cut(s) 234, 500
Alw44I GTGCAC 1 cut(s) 199
Ama87I CYCGRG 1 cut(s) 212
AoxI GGCC 2 cut(s) 16, 731
ApaLI GTGCAC 1 cut(s) 199
ApeKI GCWGC 2 cut(s) 790, 793
ApoI RAATTY 1 cut(s) 511
AspLEI GCGC 1 cut(s) 262
AspS9I GGNCC 1 cut(s) 216
AsuHPI GGTGA 1 cut(s) 406
AvaI CYCGRG 1 cut(s) 212
AvaII GGWCC 1 cut(s) 216
BaeGI GKGCMC 1 cut(s) 203
BalI TGGCCA 1 cut(s) 18
BbsI GAAGAC 2 cut(s) 132, 417
Bbv12I GWGCWC 1 cut(s) 203
BbvI GCAGC 2 cut(s) 802, 805
BccI CCATC 2 cut(s) 14, 66
BceAI ACGGC 1 cut(s) 372
BclI TGATCA 1 cut(s) 565
BcoDI GTCTC 2 cut(s) 234, 500
BfaI CTAG 1 cut(s) 321
BisI GCNGC 3 cut(s) 356, 791, 794
BlsI GCNGC 3 cut(s) 357, 792, 795
Bme18I GGWCC 1 cut(s) 216
BmeRI GACNNNNNGTC 1 cut(s) 247
BmeT110I CYCGRG 1 cut(s) 212
BmgBI CACGTC 1 cut(s) 64
BmgT120I GGNCC 1 cut(s) 216
BmiI GGNNCC 1 cut(s) 217
BmsI GCATC 2 cut(s) 565, 734
BoxI GACNNNNGTC 1 cut(s) 417
BpiI GAAGAC 2 cut(s) 132, 417
BpuEI CTTGAG 1 cut(s) 212
BsaJI CCNNGG 1 cut(s) 211
BsaXI ACNNNNNCTCC 2 cut(s) 220, 250
Bsc4I CCNNNNNNNGG 2 cut(s) 65, 225
Bse3DI GCAATG 1 cut(s) 754
BseDI CCNNGG 1 cut(s) 211
BseGI GGATG 2 cut(s) 77, 764
BseLI CCNNNNNNNGG 2 cut(s) 65, 225
BseMI GCAATG 1 cut(s) 754
BseMII CTCAG 2 cut(s) 87, 176
BseRI GAGGAG 1 cut(s) 680
BseSI GKGCMC 1 cut(s) 203
BseXI GCAGC 2 cut(s) 802, 805
Bsh1285I CGRYCG 2 cut(s) 162, 418
BshFI GGCC 2 cut(s) 18, 733
BsiEI CGRYCG 2 cut(s) 162, 418
BsiHKAI GWGCWC 1 cut(s) 203
BsiHKCI CYCGRG 1 cut(s) 212
BslFI GGGAC 1 cut(s) 229
BslI CCNNNNNNNGG 2 cut(s) 65, 225
BsmAI GTCTC 2 cut(s) 234, 500
BsmBI CGTCTC 2 cut(s) 234, 500
BsmFI GGGAC 1 cut(s) 229
BsnI GGCC 2 cut(s) 18, 733
BsoBI CYCGRG 1 cut(s) 212
Bsp1286I GDGCHC 1 cut(s) 203
Bsp143I GATC 2 cut(s) 159, 565
BspACI CCGC 2 cut(s) 353, 356
BspANI GGCC 2 cut(s) 18, 733
BspCNI CTCAG 2 cut(s) 88, 177
BspHI TCATGA 1 cut(s) 327
BspLI GGNNCC 1 cut(s) 217
BsrDI GCAATG 1 cut(s) 754
BssECI CCNNGG 1 cut(s) 211
BssMI GATC 2 cut(s) 159, 565
Bst4CI ACNGT 2 cut(s) 344, 416
Bst6I CTCTTC 2 cut(s) 534, 651
BstDEI CTNAG 2 cut(s) 96, 185
BstEII GGTNACC 1 cut(s) 805
BstF5I GGATG 2 cut(s) 77, 764
BstHHI GCGC 1 cut(s) 262
BstKTI GATC 2 cut(s) 162, 568
BstMAI GTCTC 2 cut(s) 234, 500
BstMBI GATC 2 cut(s) 159, 565
BstMCI CGRYCG 2 cut(s) 162, 418
BstMWI GCNNNNNNNGC 2 cut(s) 207, 266
BstPAI GACNNNNGTC 1 cut(s) 417
BstPI GGTNACC 1 cut(s) 805
BstSLI GKGCMC 1 cut(s) 203
BstV1I GCAGC 2 cut(s) 802, 805
BstV2I GAAGAC 2 cut(s) 132, 417
BsuRI GGCC 2 cut(s) 18, 733
BtrI CACGTC 1 cut(s) 64
BtsCI GGATG 2 cut(s) 77, 764
CciI TCATGA 1 cut(s) 327
CfoI GCGC 1 cut(s) 262
Cfr13I GGNCC 1 cut(s) 216
CseI GACGC 1 cut(s) 539
CviAII CATG 1 cut(s) 328
DdeI CTNAG 2 cut(s) 96, 185
DpnI GATC 2 cut(s) 161, 567
DpnII GATC 2 cut(s) 159, 565
DriI GACNNNNNGTC 1 cut(s) 247
EaeI YGGCCR 1 cut(s) 16
Eam1104I CTCTTC 2 cut(s) 534, 651
Eam1105I GACNNNNNGTC 1 cut(s) 247
EarI CTCTTC 2 cut(s) 534, 651
EciI GGCGGA 1 cut(s) 342
Eco47I GGWCC 1 cut(s) 216
Eco88I CYCGRG 1 cut(s) 212
Eco91I GGTNACC 1 cut(s) 805
EcoO65I GGTNACC 1 cut(s) 805
EcoRI GAATTC 1 cut(s) 511
Esp3I CGTCTC 2 cut(s) 234, 500
FaeI CATG 1 cut(s) 331
FaiI YATR 5 cut(s) 150, 329, 392, 405, 776
FalI AAGNNNNNCTT 2 cut(s) 474, 506
FaqI GGGAC 1 cut(s) 229
FatI CATG 1 cut(s) 327
FbaI TGATCA 1 cut(s) 565
FblI GTMKAC 1 cut(s) 153
Fnu4HI GCNGC 3 cut(s) 356, 791, 794
FokI GGATG 2 cut(s) 84, 771
Fsp4HI GCNGC 3 cut(s) 356, 791, 794
FspBI CTAG 1 cut(s) 321
GlaI GCGC 1 cut(s) 261
GluI GCNGC 3 cut(s) 356, 791, 794
HaeIII GGCC 2 cut(s) 18, 733
HgaI GACGC 1 cut(s) 539
HhaI GCGC 1 cut(s) 262
Hin1II CATG 1 cut(s) 331
Hin6I GCGC 1 cut(s) 260
HinP1I GCGC 1 cut(s) 260
HincII GTYRAC 1 cut(s) 370
HindII GTYRAC 1 cut(s) 370
HindIII AAGCTT 1 cut(s) 21
HinfI GANTC 2 cut(s) 286, 375
HphI GGTGA 1 cut(s) 406
Hpy166II GTNNAC 3 cut(s) 154, 201, 370
Hpy188I TCNGA 2 cut(s) 97, 472
Hpy188III TCNNGA 6 cut(s) 59, 115, 163, 214, 328, 479
Hpy8I GTNNAC 3 cut(s) 154, 201, 370
Hpy99I CGWCG 1 cut(s) 480
HpyAV CCTTC 2 cut(s) 476, 480
HpyCH4III ACNGT 2 cut(s) 344, 416
HpyCH4IV ACGT 2 cut(s) 63, 475
HpyCH4V TGCA 4 cut(s) 85, 201, 578, 747
HpyF10VI GCNNNNNNNGC 2 cut(s) 207, 266
HpyF3I CTNAG 2 cut(s) 96, 185
HpySE526I ACGT 2 cut(s) 63, 475
Hsp92II CATG 1 cut(s) 331
HspAI GCGC 1 cut(s) 260
Ksp22I TGATCA 1 cut(s) 565
Kzo9I GATC 2 cut(s) 159, 565
LpnPI CCDG 3 cut(s) 72, 128, 715
Lsp1109I GCAGC 2 cut(s) 802, 805
LweI GCATC 2 cut(s) 565, 734
MaeI CTAG 1 cut(s) 321
MaeII ACGT 2 cut(s) 63, 475
MaeIII GTNAC 2 cut(s) 252, 805
MalI GATC 2 cut(s) 161, 567
MboI GATC 2 cut(s) 159, 565
MhlI GDGCHC 1 cut(s) 203
MlsI TGGCCA 1 cut(s) 18
MluCI AATT 4 cut(s) 435, 511, 781, 797
MluNI TGGCCA 1 cut(s) 18
MlyI GAGTC 1 cut(s) 295
Mox20I TGGCCA 1 cut(s) 18
MscI TGGCCA 1 cut(s) 18
MseI TTAA 2 cut(s) 780, 814
Msp20I TGGCCA 1 cut(s) 18
MwoI GCNNNNNNNGC 2 cut(s) 207, 266
NdeII GATC 2 cut(s) 159, 565
NlaIII CATG 1 cut(s) 331
NlaIV GGNNCC 1 cut(s) 217
NmuCI GTSAC 1 cut(s) 805
PagI TCATGA 1 cut(s) 327
PfeI GAWTC 1 cut(s) 375
PkrI GCNGC 3 cut(s) 357, 792, 795
Ple19I CGATCG 1 cut(s) 162
PleI GAGTC 1 cut(s) 294
PpsI GAGTC 1 cut(s) 294
PshAI GACNNNNGTC 1 cut(s) 417
PspEI GGTNACC 1 cut(s) 805
PspN4I GGNNCC 1 cut(s) 217
PspPI GGNCC 1 cut(s) 216
PvuI CGATCG 1 cut(s) 162
SaqAI TTAA 2 cut(s) 780, 814
SatI GCNGC 3 cut(s) 356, 791, 794
Sau3AI GATC 2 cut(s) 159, 565
Sau96I GGNCC 1 cut(s) 216
SchI GAGTC 1 cut(s) 295
SduI GDGCHC 1 cut(s) 203
SetI ASST 9 cut(s) 25, 66, 148, 181, 310, 326, 457, 478, 723
SfaNI GCATC 2 cut(s) 565, 734
SinI GGWCC 1 cut(s) 216
SmlI CTYRAG 1 cut(s) 191
SmoI CTYRAG 1 cut(s) 191
Sse9I AATT 4 cut(s) 435, 511, 781, 797
SsiI CCGC 2 cut(s) 353, 356
SspI AATATT 2 cut(s) 89, 277
SspMI CTAG 1 cut(s) 321
TaaI ACNGT 2 cut(s) 344, 416
TaiI ACGT 2 cut(s) 66, 478
TaqI TCGA 1 cut(s) 162
TaqII GACCGA 1 cut(s) 233
TasI AATT 4 cut(s) 435, 511, 781, 797
TauI GCSGC 1 cut(s) 358
TfiI GAWTC 1 cut(s) 375
Tru1I TTAA 2 cut(s) 780, 814
Tru9I TTAA 2 cut(s) 780, 814
TseFI GTSAC 1 cut(s) 805
TseI GCWGC 2 cut(s) 790, 793
Tsp45I GTSAC 1 cut(s) 805
TspDTI ATGAA 4 cut(s) 316, 504, 573, 765
TspGWI ACGGA 3 cut(s) 163, 355, 387
VneI GTGCAC 1 cut(s) 199
VpaK11BI GGWCC 1 cut(s) 216
XapI RAATTY 1 cut(s) 511
XmiI GTMKAC 1 cut(s) 153
XspI CTAG 1 cut(s) 321
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.