Prupe.8G241400_v2.0.a1

Protein FANTASTIC FOUR 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0013161
Physical Location & Seq
Forward (+)
21137506 .. 21139618
2113 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G241400.1

Sequence Viewer

Length: 1140 bp
ATGTCGTCAACATCAAGCACTGTTTGCCATCAAGGGATGAAATCATGCCTCGAGCCTCTTGTTAGGCTCAAACTGGCTCCACCCAGGTCAAATTTTCCCTCGACCTCTTGTTGGGATTGCAAGCCTGACCCTCAAGAGACAGAAGAAATATCCCACATTGAAAAAACCATCACAACCACAAACAACAACTTGAACTTGATTGACAGCAAGGACGCTGACAAGCCTGGCTTGAGCTTCCTCCAGTCTCTCGGCAACCCGAAAAATCAGACCACAAAAACAGAGACTGAAACAGAGAAAGTCTATGTCCACCCACTTGTGAAGCGCTCTGCTTTAATGCTGAGCCCAAAAAGCTTGGAAATGTGCACTGAAAGCTTAGGCAGCGAGACCGGTAGCGAAAACGGCGGTGATGACTTTTCTCTTTTTTCGCAAATTGATGCTGACATTTCTTTTCTCTCACTTAAAAGCAGTGGAAAAATTAACCCAACATGCACTCCCACTATTACAAGTGAGAGTTCTAAAATATCGAGTGACAATAATGTTCGAGCTTCACCAAAGACATTGAAACGTAGTGTTGCTACTAGTTTTCCTCCTCCTTTAACATCCATCAGTGGCTCCAATGGTGTTCAAGTGAGGCCTCACAGAGAAGGCGGCCGGCTAGTTTTGAAAGCAGTTACTGTCAGCTCTCCTCCAACAGCCTATTTCCAAGCCGAGCGTGGTGATGGCAGGCTCAGGCTGCTTTTGTTGAAGGACCCTTCTCCGAACTGTGACATTGAAGAAGCTGGAGAGGATGAATGCGAAGAAGAATTCCCTGTGGAAGATGATCCAGCTGTTGAGGTTGAAGAAGATGAGGTTCAAAATCAAATGGAAGCTGAAAATGAAGCTTATGATTGTGAGGAAGAAAATGGCTTTGATGTTGAAACAGAGGAAATGGATTGGAAGAGTGGAAATGTGAAAACAGAGGAGATGGATGGGAATGCTGGAAATGTTGTTGAAGCAGAGGAGATGGATGGAAATAGTGGAAATGTTGCGGGTGAAAAGGGAATGGGGAAACTTCCAAGGCCAAGCAGATGCAAAGAAGGTCGGCGTGGGAACAAGAAGATGGTCATGAATTGGCCGGAGTCTTTTTGGGTCGCCACTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAF

Protein Analysis

380

Amino Acids

41.47

Weight (kDa)

4.63

Isoelectric Point (pI)

59.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013161)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03170 AT4G02810
fragaria_vesca FvH4_2g23620
malus_domestica MD03G1265600.v1.1 MD11G1286200.v1.1
prunus_persica Prupe.8G241400_v2.0.a1
pyrus_communis pycom11g25370
rosa_chinensis RchiOBHm_Chr6g0291081
rosa_laevigata RLG00000012146
rosa_multiflora Rmu_co8364113.1_g000001 Rmu_sc0004642.1_g000010
rosa_roxburghii Rroxscaffold_7G00176390
rosa_rugosa Rorug06G0217400
rosa_samantha Rh6AG327700 Rh6BG335200 Rh6CG341400 Rh6DG328600
rosa_wichuraiana Rw6G028500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 402, 648, 1028
AclWI GGATC 1 cut(s) 815
AcoI YGGCCR 2 cut(s) 649, 1112
AcsI RAATTY 2 cut(s) 91, 803
AfeI AGCGCT 1 cut(s) 323
AfiI CCNNNNNNNGG 1 cut(s) 111
AgeI ACCGGT 1 cut(s) 386
AhlI ACTAGT 1 cut(s) 578
AjnI CCWGG 2 cut(s) 83, 223
AluBI AGCT 9 cut(s) 234, 351, 372, 545, 681, 779, 827, 869, 881
AluI AGCT 9 cut(s) 234, 351, 372, 545, 681, 779, 827, 869, 881
Alw21I GWGCWC 1 cut(s) 365
Alw26I GTCTC 4 cut(s) 131, 249, 275, 377
Alw44I GTGCAC 1 cut(s) 361
AlwI GGATC 1 cut(s) 815
AlwNI CAGNNNCTG 2 cut(s) 284, 674
Ama87I CYCGRG 1 cut(s) 50
Aor51HI AGCGCT 1 cut(s) 323
AoxI GGCC 4 cut(s) 632, 649, 1058, 1112
ApaLI GTGCAC 1 cut(s) 361
ApeKI GCWGC 2 cut(s) 378, 733
ApoI RAATTY 2 cut(s) 91, 803
AsiGI ACCGGT 1 cut(s) 386
AspLEI GCGC 1 cut(s) 324
AspS9I GGNCC 1 cut(s) 748
AsuHPI GGTGA 4 cut(s) 416, 540, 728, 1043
AvaI CYCGRG 1 cut(s) 50
AvaII GGWCC 1 cut(s) 748
BaeGI GKGCMC 1 cut(s) 365
BanII GRGCYC 1 cut(s) 344
Bbv12I GWGCWC 1 cut(s) 365
BbvI GCAGC 2 cut(s) 390, 720
BccI CCATC 9 cut(s) 36, 176, 611, 713, 958, 962, 997, 1001, 1093
BceAI ACGGC 1 cut(s) 415
BciT130I CCWGG 2 cut(s) 85, 225
BcoDI GTCTC 4 cut(s) 131, 249, 275, 377
BcuI ACTAGT 1 cut(s) 578
BfaI CTAG 2 cut(s) 579, 656
BfoI RGCGCY 1 cut(s) 325
BisI GCNGC 3 cut(s) 379, 649, 734
BlpI GCTNAGC 1 cut(s) 338
BlsI GCNGC 3 cut(s) 380, 650, 735
Bme1390I CCNGG 2 cut(s) 85, 225
Bme18I GGWCC 1 cut(s) 748
BmeT110I CYCGRG 1 cut(s) 50
BmgT120I GGNCC 1 cut(s) 748
BmiI GGNNCC 3 cut(s) 78, 613, 750
BmrFI CCNGG 2 cut(s) 85, 225
BmsI GCATC 2 cut(s) 424, 1058
BpmI CTGGAG 2 cut(s) 224, 801
Bpu10I CCTNAGC 2 cut(s) 373, 728
Bpu1102I GCTNAGC 1 cut(s) 338
BpuEI CTTGAG 2 cut(s) 117, 250
BsaI GGTCTC 1 cut(s) 377
BsaJI CCNNGG 2 cut(s) 83, 1055
BsaWI WCCGGW 1 cut(s) 386
BsaXI ACNNNNNCTCC 2 cut(s) 475, 505
Bsc4I CCNNNNNNNGG 1 cut(s) 111
Bse118I RCCGGY 2 cut(s) 386, 651
Bse1I ACTGG 2 cut(s) 78, 241
BseBI CCWGG 2 cut(s) 85, 225
BseDI CCNNGG 2 cut(s) 83, 1055
BseGI GGATG 5 cut(s) 42, 599, 793, 973, 1012
BseLI CCNNNNNNNGG 1 cut(s) 111
BseMII CTCAG 2 cut(s) 329, 742
BseNI ACTGG 2 cut(s) 78, 241
BseRI GAGGAG 4 cut(s) 579, 675, 974, 1013
BseSI GKGCMC 1 cut(s) 365
BseX3I CGGCCG 1 cut(s) 649
BseXI GCAGC 2 cut(s) 390, 720
Bsh1285I CGRYCG 1 cut(s) 652
BshFI GGCC 4 cut(s) 634, 651, 1060, 1114
BshTI ACCGGT 1 cut(s) 386
BsiEI CGRYCG 1 cut(s) 652
BsiHKAI GWGCWC 1 cut(s) 365
BsiHKCI CYCGRG 1 cut(s) 50
BsiSI CCGG 3 cut(s) 387, 652, 1115
BslI CCNNNNNNNGG 1 cut(s) 111
BsmAI GTCTC 4 cut(s) 131, 249, 275, 377
BsmI GAATGC 2 cut(s) 797, 979
BsnI GGCC 4 cut(s) 634, 651, 1060, 1114
Bso31I GGTCTC 1 cut(s) 377
BsoBI CYCGRG 1 cut(s) 50
Bsp1286I GDGCHC 2 cut(s) 344, 365
Bsp143I GATC 1 cut(s) 820
Bsp1720I GCTNAGC 1 cut(s) 338
BspACI CCGC 3 cut(s) 402, 648, 1028
BspANI GGCC 4 cut(s) 634, 651, 1060, 1114
BspCNI CTCAG 2 cut(s) 330, 741
BspHI TCATGA 1 cut(s) 1104
BspLI GGNNCC 3 cut(s) 78, 613, 750
BspPI GGATC 1 cut(s) 815
BspTNI GGTCTC 1 cut(s) 377
BsrFI RCCGGY 2 cut(s) 386, 651
BsrI ACTGG 2 cut(s) 78, 241
BssAI RCCGGY 2 cut(s) 386, 651
BssECI CCNNGG 2 cut(s) 83, 1055
BssMI GATC 1 cut(s) 820
BssT1I CCWWGG 1 cut(s) 1055
Bst2UI CCWGG 2 cut(s) 85, 225
Bst4CI ACNGT 3 cut(s) 22, 676, 764
Bst6I CTCTTC 1 cut(s) 932
BstAPI GCANNNNNTGC 1 cut(s) 24
BstC8I GCNNGC 3 cut(s) 122, 653, 725
BstDEI CTNAG 4 cut(s) 338, 373, 728, 1137
BstF5I GGATG 5 cut(s) 42, 599, 793, 973, 1012
BstH2I RGCGCY 1 cut(s) 325
BstHHI GCGC 1 cut(s) 324
BstKTI GATC 1 cut(s) 823
BstMAI GTCTC 4 cut(s) 131, 249, 275, 377
BstMBI GATC 1 cut(s) 820
BstMCI CGRYCG 1 cut(s) 652
BstMWI GCNNNNNNNGC 6 cut(s) 24, 348, 369, 378, 399, 733
BstNI CCWGG 2 cut(s) 85, 225
BstNSI RCATGY 1 cut(s) 489
BstSCI CCNGG 2 cut(s) 83, 223
BstSLI GKGCMC 1 cut(s) 365
BstV1I GCAGC 2 cut(s) 390, 720
BstZI CGGCCG 1 cut(s) 649
BsuRI GGCC 4 cut(s) 634, 651, 1060, 1114
BtsCI GGATG 5 cut(s) 42, 599, 793, 973, 1012
BtsI GCAGTG 1 cut(s) 472
BtsIMutI CAGTG 4 cut(s) 18, 363, 472, 613
Cac8I GCNNGC 3 cut(s) 122, 653, 725
CaiI CAGNNNCTG 2 cut(s) 284, 674
CciI TCATGA 1 cut(s) 1104
CfoI GCGC 1 cut(s) 324
Cfr10I RCCGGY 2 cut(s) 386, 651
Cfr13I GGNCC 1 cut(s) 748
CseI GACGC 1 cut(s) 221
CspAI ACCGGT 1 cut(s) 386
CviAII CATG 3 cut(s) 45, 486, 1105
DdeI CTNAG 4 cut(s) 338, 373, 728, 1137
DpnI GATC 1 cut(s) 822
DpnII GATC 1 cut(s) 820
EaeI YGGCCR 2 cut(s) 649, 1112
EagI CGGCCG 1 cut(s) 649
Eam1104I CTCTTC 1 cut(s) 932
EarI CTCTTC 1 cut(s) 932
EclXI CGGCCG 1 cut(s) 649
Eco130I CCWWGG 1 cut(s) 1055
Eco147I AGGCCT 1 cut(s) 634
Eco24I GRGCYC 1 cut(s) 344
Eco31I GGTCTC 1 cut(s) 377
Eco47I GGWCC 1 cut(s) 748
Eco47III AGCGCT 1 cut(s) 323
Eco52I CGGCCG 1 cut(s) 649
Eco88I CYCGRG 1 cut(s) 50
EcoO109I RGGNCCY 1 cut(s) 748
EcoRI GAATTC 1 cut(s) 803
EcoRII CCWGG 2 cut(s) 83, 223
EcoT14I CCWWGG 1 cut(s) 1055
EcoT38I GRGCYC 1 cut(s) 344
ErhI CCWWGG 1 cut(s) 1055
FaeI CATG 3 cut(s) 48, 489, 1108
FaiI YATR 5 cut(s) 46, 303, 487, 885, 1106
FalI AAGNNNNNCTT 2 cut(s) 212, 244
FatI CATG 3 cut(s) 44, 485, 1104
FauI CCCGC 1 cut(s) 1021
Fnu4HI GCNGC 3 cut(s) 379, 649, 734
FokI GGATG 5 cut(s) 49, 586, 800, 980, 1019
FriOI GRGCYC 1 cut(s) 344
Fsp4HI GCNGC 3 cut(s) 379, 649, 734
FspBI CTAG 2 cut(s) 579, 656
GlaI GCGC 1 cut(s) 323
GluI GCNGC 3 cut(s) 379, 649, 734
GsuI CTGGAG 2 cut(s) 224, 801
HaeII RGCGCY 1 cut(s) 325
HaeIII GGCC 4 cut(s) 634, 651, 1060, 1114
HapII CCGG 3 cut(s) 387, 652, 1115
HgaI GACGC 1 cut(s) 221
HhaI GCGC 1 cut(s) 324
Hin1II CATG 3 cut(s) 48, 489, 1108
Hin6I GCGC 1 cut(s) 322
HinP1I GCGC 1 cut(s) 322
HincII GTYRAC 1 cut(s) 9
HindII GTYRAC 1 cut(s) 9
HindIII AAGCTT 3 cut(s) 349, 370, 879
HinfI GANTC 1 cut(s) 1118
HpaII CCGG 3 cut(s) 387, 652, 1115
HphI GGTGA 4 cut(s) 416, 540, 728, 1043
Hpy166II GTNNAC 3 cut(s) 9, 307, 363
Hpy188I TCNGA 2 cut(s) 267, 759
Hpy188III TCNNGA 2 cut(s) 134, 1105
Hpy8I GTNNAC 3 cut(s) 9, 307, 363
HpyAV CCTTC 4 cut(s) 638, 739, 762, 1070
HpyCH4III ACNGT 3 cut(s) 22, 676, 764
HpyCH4IV ACGT 1 cut(s) 565
HpyCH4V TGCA 4 cut(s) 120, 363, 489, 1071
HpyF10VI GCNNNNNNNGC 6 cut(s) 24, 348, 369, 378, 399, 733
HpyF3I CTNAG 4 cut(s) 338, 373, 728, 1137
HpySE526I ACGT 1 cut(s) 565
Hsp92II CATG 3 cut(s) 48, 489, 1108
HspAI GCGC 1 cut(s) 322
KroI GCCGGC 1 cut(s) 651
KroNI GCCGGC 1 cut(s) 653
Kzo9I GATC 1 cut(s) 820
LmnI GCTCC 2 cut(s) 82, 617
Lsp1109I GCAGC 2 cut(s) 390, 720
LweI GCATC 2 cut(s) 424, 1058
MaeI CTAG 2 cut(s) 579, 656
MaeII ACGT 1 cut(s) 565
MaeIII GTNAC 3 cut(s) 527, 670, 764
MalI GATC 1 cut(s) 822
MboI GATC 1 cut(s) 820
MhlI GDGCHC 2 cut(s) 344, 365
MluCI AATT 5 cut(s) 91, 429, 474, 803, 1108
MlyI GAGTC 1 cut(s) 1127
MmeI TCCRAC 1 cut(s) 713
MroNI GCCGGC 1 cut(s) 651
MseI TTAA 4 cut(s) 332, 459, 477, 596
MspA1I CMGCKG 1 cut(s) 827
MspI CCGG 3 cut(s) 387, 652, 1115
MspR9I CCNGG 2 cut(s) 85, 225
Mva1269I GAATGC 2 cut(s) 797, 979
MvaI CCWGG 2 cut(s) 85, 225
MwoI GCNNNNNNNGC 6 cut(s) 24, 348, 369, 378, 399, 733
NaeI GCCGGC 1 cut(s) 653
NdeII GATC 1 cut(s) 820
NgoMIV GCCGGC 1 cut(s) 651
NlaIII CATG 3 cut(s) 48, 489, 1108
NlaIV GGNNCC 3 cut(s) 78, 613, 750
NmeAIII GCCGAG 2 cut(s) 228, 733
NmuCI GTSAC 2 cut(s) 527, 764
NspI RCATGY 1 cut(s) 489
PaeR7I CTCGAG 1 cut(s) 50
PagI TCATGA 1 cut(s) 1104
PceI AGGCCT 1 cut(s) 634
PctI GAATGC 2 cut(s) 797, 979
PdiI GCCGGC 1 cut(s) 653
PinAI ACCGGT 1 cut(s) 386
PkrI GCNGC 3 cut(s) 380, 650, 735
PleI GAGTC 1 cut(s) 1126
PpsI GAGTC 1 cut(s) 1126
PpuMI RGGWCCY 1 cut(s) 748
Psp5II RGGWCCY 1 cut(s) 748
Psp6I CCWGG 2 cut(s) 83, 223
PspGI CCWGG 2 cut(s) 83, 223
PspN4I GGNNCC 3 cut(s) 78, 613, 750
PspPI GGNCC 1 cut(s) 748
PspPPI RGGWCCY 1 cut(s) 748
PspXI VCTCGAGB 1 cut(s) 50
PstNI CAGNNNCTG 2 cut(s) 284, 674
PvuII CAGCTG 1 cut(s) 827
SaqAI TTAA 4 cut(s) 332, 459, 477, 596
SatI GCNGC 3 cut(s) 379, 649, 734
Sau3AI GATC 1 cut(s) 820
Sau96I GGNCC 1 cut(s) 748
SchI GAGTC 1 cut(s) 1127
ScrFI CCNGG 2 cut(s) 85, 225
SduI GDGCHC 2 cut(s) 344, 365
SfaNI GCATC 2 cut(s) 424, 1058
Sfr274I CTCGAG 1 cut(s) 50
SinI GGWCC 1 cut(s) 748
SlaI CTCGAG 1 cut(s) 50
SmlI CTYRAG 3 cut(s) 50, 132, 229
SmoI CTYRAG 3 cut(s) 50, 132, 229
SpeI ACTAGT 1 cut(s) 578
Sse9I AATT 5 cut(s) 91, 429, 474, 803, 1108
SseBI AGGCCT 1 cut(s) 634
SsiI CCGC 3 cut(s) 402, 648, 1028
SspMI CTAG 2 cut(s) 579, 656
StuI AGGCCT 1 cut(s) 634
StyD4I CCNGG 2 cut(s) 83, 223
StyI CCWWGG 1 cut(s) 1055
TaaI ACNGT 3 cut(s) 22, 676, 764
TaiI ACGT 1 cut(s) 568
TaqI TCGA 4 cut(s) 51, 101, 524, 541
TasI AATT 5 cut(s) 91, 429, 474, 803, 1108
TauI GCSGC 1 cut(s) 651
Tru1I TTAA 4 cut(s) 332, 459, 477, 596
Tru9I TTAA 4 cut(s) 332, 459, 477, 596
TscAI CASTG 4 cut(s) 25, 370, 472, 613
TseFI GTSAC 2 cut(s) 527, 764
TseI GCWGC 2 cut(s) 378, 733
Tsp45I GTSAC 2 cut(s) 527, 764
TspDTI ATGAA 4 cut(s) 53, 804, 891, 1121
TspRI CASTG 4 cut(s) 25, 370, 472, 613
VneI GTGCAC 1 cut(s) 361
VpaK11BI GGWCC 1 cut(s) 748
XapI RAATTY 2 cut(s) 91, 803
XceI RCATGY 1 cut(s) 489
XcmI CCANNNNNNNNNTGG 1 cut(s) 710
XhoI CTCGAG 1 cut(s) 50
XspI CTAG 2 cut(s) 579, 656
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.