Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009394

Physical Location & Seq

Genomic Coordinates Forward (+)

7071672 .. 7075537

Gene Structure 3866 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G11740.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1695 bp

ATGGCGACACCGAATCAGGAAGCAATCGACACTTTCATCAGCATCACCGGCGCTTCTGACGCCGTCGCCCTTCAGAAACTCGAGGAGCATCGTGGTGATCTTAATCAAGCAGTGAATGCATATTTCAGCGAAGGAGATCGAAATGTAGTACGTGAAGCGCCGGTTAATGATGATGATGAAATGGATATAGATGATGTGATTCCGGCTCCACAATCTCCTCTCTCTATGTTCAATGCAGCTAGAACAATTGGCCGTCCTCCCTTTTCGCTTTTGGATTCGGACTTTGCTAGACGTGTATTTGATAGCGATCCTCTTATGCCACGCCCTCCGTTTGTTAGTCATCCTAGAGAGGTTAGGCAGATACCTATAGAGGTTAAGGATAGCAGTGGGCCATCTGGACGATCTAGTGATGCTCCTACTATTGAAGATGTGACAGAAACAGCTCATGTTCAGGGTCCAGTAACTACCCAAGGAACTGTTATTATTGATGAAGAGAGTGATGATGATATTCCTTTTGCACCAATGGGACGAAGTAGGCAAGACAGACCTGCTGGTTCTGTAGCCAATAATAATAATCAAGATTACAATGATATAGAAGAAGAAATGATCAGAGCTGCCATTGAGGCCTCAAAGAAAGAGGCTGAGGGATCAAGTAACCCTTTACTTGAAGAGAGGCCACTTCACATGGAAGATGATGATGACATAGCAATAGCTGTTACAATGTCATTGAAGTCAGCGGAGGAAGAAGTTTTGCGCAGTCAAGGGTATAAGGCCTCAACCTCGGAAATAGGAGCTTCTGCAGTGACTGCTGCTCAAGGACCTCAGGATACCCAGGCCCTGAACGGAAGATTGGCAGCACCTAGTTCACCATTTGATGATGACTCTGATGATGTTGATGAGCAACCTCTTGTTAGACACAGGCCAAGACGTGCAGCATCCGGATCTCTGGCTCCACCTAACGCTGATCGTTCCCGGAGTGGGAGTCCTGAAGAAGAACATGCAAGTATTAATCCAGCGGAGCGTGGCAGTGGGTTTCCTTCTGAGTGGGGAGGCATTTCATCTGAGGAACATGATGAAGCTGTCATGCTCGAGGCAGCCATGTTTGGTGGCATTCCTGAAACTGGATATAATCATCTTCCATTCTTACCTCCTCAGCCGAGGGCCCAACCACGTCCACCCTCACCTTCGCTGACAGCTCAGAGGTTGATACGGGAACAGCAGGATGATGAGTATGTTGCGTCCCTGCAAGCTGACCGAGATAAAGAAATGAAGTCCATTAGAGATGCTGAGGCACGTCAGCTAGAGGAAGAAACTGCGAGAAAGGCTTTTCTGGAGGAAGAAAAGAAAAAAGAGGAAGAAGCTCAAAGAAAACTCGAGGAGGAACAGGAGCTAGAAAGACAACTAGATGCAAAAGAAGCGTCTTTACCTAAGGAGCCTCAAGCTGATGAAGAGAATGCCATTACCCTTCTAATCCGGATGCCGGATGGAACACGTCGGGGCCGCCGGTTCCTTAAATCTGACAAACTCCAAACCCTTTTCAACTTTATAGACATTGCCAGAGTGGTGAAACCCAACACTTACAGACTGGTGAGGCCATATCCGAGGCATGCGTTTGGAGATGGGGAAAGTGAGTCGACCTTAAACGATCTTGGATTGACCAGCAAACAAGAAGCATTGTTCCTTGAGCTTATCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006810 GO:0008150 GO:0016192 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0051179 GO:0051234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UBA_4 UBX

Protein Analysis

564

Amino Acids

62.35

Weight (kDa)

4.55

Isoelectric Point (pI)

62.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UBA_8	PF22566	5 - 45	4.9e-07	UBA-like domain
UBA_4	PF14555	6 - 47	3.9e-14	UBA-like domain
UBX	PF00789	483 - 562	1.4e-20	UBX domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009394)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G11740 AT4G11740 AT4G23040
fragaria_vesca	FvH4_5g01560
malus_domestica	MD04G1066700.v1.1 MD06G1073600.v1.1
prunus_persica	Prupe.5G091800_v2.0.a1 Prupe.5G091800_v2.0.a1
pyrus_communis	pycom04g05990 pycom06g07280
rosa_chinensis	RchiOBHm_Chr7g0199121
rosa_laevigata	RLG00000003813
rosa_multiflora	Rmu_sc0006266.1_g000051
rosa_roxburghii	Rroxscaffold_3G00257060
rosa_rugosa	Rorug07G0052800 Rorug07G0052900
rosa_samantha	Rh7AG176300 Rh7BG179800 Rh7CG185400 Rh7DG179300
rosa_wichuraiana	Rw7G015470 Rw7G015500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	755
Acc36I	ACCTGC	1 cut(s)	556
AccI	GTMKAC	1 cut(s)	1634
AccIII	TCCGGA	2 cut(s)	938, 1473
AciI	CCGC	3 cut(s)	737, 1016, 1501
AclWI	GGATC	3 cut(s)	302, 655, 949
AcoI	YGGCCR	1 cut(s)	250
AcuI	CTGAAG	2 cut(s)	56, 1008
AcyI	GRCGYC	1 cut(s)	60
AfaI	GTAC	1 cut(s)	150
AfiI	CCNNNNNNNGG	3 cut(s)	978, 1121, 1480
AflIII	ACRYGT	2 cut(s)	292, 1490
AgsI	TTSAA	5 cut(s)	232, 425, 668, 730, 1540
AjiI	CACGTC	5 cut(s)	293, 929, 1172, 1295, 1493
AjnI	CCWGG	1 cut(s)	831
AjuI	GAANNNNNNNTTGG	2 cut(s)	833, 865
AlwI	GGATC	3 cut(s)	302, 655, 949
AlwNI	CAGNNNCTG	2 cut(s)	806, 838
Ama87I	CYCGRG	3 cut(s)	80, 1088, 1373
Aor13HI	TCCGGA	2 cut(s)	938, 1473
ApaI	GGGCCC	1 cut(s)	1165
ApeKI	GCWGC	6 cut(s)	236, 614, 809, 854, 932, 1094
ArsI	GACNNNNNNTTYG	2 cut(s)	1403, 1435
AseI	ATTAAT	1 cut(s)	1008
AspLEI	GCGC	3 cut(s)	53, 160, 756
AspS9I	GGNCC	7 cut(s)	389, 455, 818, 835, 1161, 1162, 1498
AsuC2I	CCSGG	1 cut(s)	973
AsuHPI	GGTGA	6 cut(s)	37, 107, 858, 1173, 1576, 1600
AvaI	CYCGRG	3 cut(s)	80, 1088, 1373
AvaII	GGWCC	2 cut(s)	455, 818
AxyI	CCTNAGG	2 cut(s)	822, 1428
BaeGI	GKGCMC	1 cut(s)	1165
BanII	GRGCYC	1 cut(s)	1165
BarI	GAAGNNNNNNTAC	2 cut(s)	1407, 1439
BbvCI	CCTCAGC	3 cut(s)	642, 1152, 1287
BbvI	GCAGC	6 cut(s)	248, 601, 796, 866, 944, 1106
BccI	CCATC	3 cut(s)	400, 1478, 1613
BceAI	ACGGC	2 cut(s)	47, 237
BciT130I	CCWGG	1 cut(s)	833
BciVI	GTATCC	1 cut(s)	820
BclI	TGATCA	1 cut(s)	606
BcnI	CCSGG	1 cut(s)	973
BfaI	CTAG	9 cut(s)	240, 288, 345, 405, 861, 1301, 1391, 1403, 1693
BfmI	CTRYAG	3 cut(s)	366, 558, 798
BfoI	RGCGCY	2 cut(s)	54, 161
BfuAI	ACCTGC	1 cut(s)	556
BfuI	GTATCC	1 cut(s)	820
BglI	GCCNNNNNGGC	1 cut(s)	623
BisI	GCNGC	7 cut(s)	237, 615, 810, 855, 933, 1095, 1501
BlsI	GCNGC	7 cut(s)	238, 616, 811, 856, 934, 1096, 1502
Bme1390I	CCNGG	2 cut(s)	833, 973
Bme18I	GGWCC	2 cut(s)	455, 818
BmeT110I	CYCGRG	3 cut(s)	80, 1088, 1373
BmgBI	CACGTC	5 cut(s)	293, 929, 1172, 1295, 1493
BmgT120I	GGNCC	7 cut(s)	389, 455, 818, 835, 1161, 1162, 1498
BmiI	GGNNCC	7 cut(s)	207, 456, 951, 1163, 1434, 1499, 1508
BmrFI	CCNGG	2 cut(s)	833, 973
BmsI	GCATC	7 cut(s)	51, 97, 400, 944, 1273, 1396, 1467
BpmI	CTGGAG	1 cut(s)	1352
Bpu10I	CCTNAGC	3 cut(s)	642, 1152, 1287
BpuEI	CTTGAG	2 cut(s)	798, 1422
BpuMI	CCSGG	1 cut(s)	973
BsaAI	YACGTR	1 cut(s)	152
BsaBI	GATNNNNATC	2 cut(s)	102, 306
BsaHI	GRCGYC	1 cut(s)	60
BsaJI	CCNNGG	5 cut(s)	469, 780, 831, 1157, 1601
BsaWI	WCCGGW	2 cut(s)	938, 1473
BsaXI	ACNNNNNCTCC	2 cut(s)	967, 997
Bsc4I	CCNNNNNNNGG	3 cut(s)	978, 1121, 1480
Bse118I	RCCGGY	3 cut(s)	47, 160, 1503
Bse1I	ACTGG	3 cut(s)	458, 1126, 1590
Bse21I	CCTNAGG	2 cut(s)	822, 1428
Bse3DI	GCAATG	1 cut(s)	1551
Bse8I	GATNNNNATC	2 cut(s)	102, 306
BseAI	TCCGGA	2 cut(s)	938, 1473
BseBI	CCWGG	1 cut(s)	833
BseDI	CCNNGG	5 cut(s)	469, 780, 831, 1157, 1601
BseGI	GGATG	5 cut(s)	340, 935, 1228, 1482, 1489
BseJI	GATNNNNATC	2 cut(s)	102, 306
BseLI	CCNNNNNNNGG	3 cut(s)	978, 1121, 1480
BseMI	GCAATG	1 cut(s)	1551
BseMII	CTCAG	7 cut(s)	633, 836, 1032, 1053, 1166, 1211, 1278
BseNI	ACTGG	3 cut(s)	458, 1126, 1590
BseRI	GAGGAG	4 cut(s)	98, 207, 1140, 1391
BseSI	GKGCMC	1 cut(s)	1165
BseXI	GCAGC	6 cut(s)	248, 601, 796, 866, 944, 1106
BsgI	GTGCAG	1 cut(s)	951
BsiHKCI	CYCGRG	3 cut(s)	80, 1088, 1373
BsiSI	CCGG	8 cut(s)	48, 161, 203, 939, 973, 1474, 1481, 1504
BslFI	GGGAC	2 cut(s)	540, 1225
BslI	CCNNNNNNNGG	3 cut(s)	978, 1121, 1480
BsmFI	GGGAC	2 cut(s)	540, 1225
BsmI	GAATGC	3 cut(s)	121, 1110, 1459
BsoBI	CYCGRG	3 cut(s)	80, 1088, 1373
Bsp120I	GGGCCC	1 cut(s)	1161
Bsp1286I	GDGCHC	1 cut(s)	1165
Bsp13I	TCCGGA	2 cut(s)	938, 1473
Bsp143I	GATC	9 cut(s)	97, 136, 307, 401, 606, 647, 941, 964, 1645
BspACI	CCGC	3 cut(s)	737, 1016, 1501
BspCNI	CTCAG	7 cut(s)	634, 835, 1033, 1054, 1165, 1210, 1279
BspEI	TCCGGA	2 cut(s)	938, 1473
BspLI	GGNNCC	7 cut(s)	207, 456, 951, 1163, 1434, 1499, 1508
BspMAI	CTGCAG	1 cut(s)	802
BspMI	ACCTGC	1 cut(s)	556
BspPI	GGATC	3 cut(s)	302, 655, 949
BsrDI	GCAATG	1 cut(s)	1551
BsrFI	RCCGGY	3 cut(s)	47, 160, 1503
BsrI	ACTGG	3 cut(s)	458, 1126, 1590
BssAI	RCCGGY	3 cut(s)	47, 160, 1503
BssECI	CCNNGG	5 cut(s)	469, 780, 831, 1157, 1601
BssMI	GATC	9 cut(s)	97, 136, 307, 401, 606, 647, 941, 964, 1645
BssNI	GRCGYC	1 cut(s)	60
BssT1I	CCWWGG	1 cut(s)	469
Bst2UI	CCWGG	1 cut(s)	833
Bst4CI	ACNGT	1 cut(s)	478
Bst6I	CTCTTC	3 cut(s)	486, 663, 1443
BstACI	GRCGYC	1 cut(s)	60
BstAPI	GCANNNNNTGC	2 cut(s)	116, 806
BstBAI	YACGTR	1 cut(s)	152
BstC8I	GCNNGC	2 cut(s)	1248, 1608
BstDEI	CTNAG	8 cut(s)	642, 822, 1041, 1062, 1152, 1197, 1287, 1428
BstF5I	GGATG	5 cut(s)	340, 935, 1228, 1482, 1489
BstH2I	RGCGCY	2 cut(s)	54, 161
BstHHI	GCGC	3 cut(s)	53, 160, 756
BstKTI	GATC	9 cut(s)	100, 139, 310, 404, 609, 650, 944, 967, 1648
BstMBI	GATC	9 cut(s)	97, 136, 307, 401, 606, 647, 941, 964, 1645
BstMWI	GCNNNNNNNGC	7 cut(s)	48, 59, 116, 623, 806, 1322, 1415
BstNI	CCWGG	1 cut(s)	833
BstNSI	RCATGY	2 cut(s)	1001, 1610
BstSCI	CCNGG	2 cut(s)	831, 971
BstSFI	CTRYAG	3 cut(s)	366, 558, 798
BstSLI	GKGCMC	1 cut(s)	1165
BstV1I	GCAGC	6 cut(s)	248, 601, 796, 866, 944, 1106
BstX2I	RGATCY	1 cut(s)	941
BstYI	RGATCY	1 cut(s)	941
Bsu36I	CCTNAGG	2 cut(s)	822, 1428
BsuI	GTATCC	1 cut(s)	820
BtrI	CACGTC	5 cut(s)	293, 929, 1172, 1295, 1493
BtsCI	GGATG	5 cut(s)	340, 935, 1228, 1482, 1489
BtsI	GCAGTG	4 cut(s)	117, 391, 807, 1033
BtsIMutI	CAGTG	4 cut(s)	117, 391, 807, 1033
BveI	ACCTGC	1 cut(s)	556
Cac8I	GCNNGC	2 cut(s)	1248, 1608
CaiI	CAGNNNCTG	2 cut(s)	806, 838
CfoI	GCGC	3 cut(s)	53, 160, 756
Cfr10I	RCCGGY	3 cut(s)	47, 160, 1503
Cfr13I	GGNCC	7 cut(s)	389, 455, 818, 835, 1161, 1162, 1498
CseI	GACGC	3 cut(s)	68, 1227, 1407
Csp6I	GTAC	1 cut(s)	149
CviAII	CATG	7 cut(s)	446, 685, 998, 1070, 1084, 1099, 1607
CviQI	GTAC	1 cut(s)	149
DdeI	CTNAG	8 cut(s)	642, 822, 1041, 1062, 1152, 1197, 1287, 1428
DpnI	GATC	9 cut(s)	99, 138, 309, 403, 608, 649, 943, 966, 1647
DpnII	GATC	9 cut(s)	97, 136, 307, 401, 606, 647, 941, 964, 1645
EaeI	YGGCCR	1 cut(s)	250
Eam1104I	CTCTTC	3 cut(s)	486, 663, 1443
EarI	CTCTTC	3 cut(s)	486, 663, 1443
Eco130I	CCWWGG	1 cut(s)	469
Eco147I	AGGCCT	2 cut(s)	626, 773
Eco24I	GRGCYC	1 cut(s)	1165
Eco47I	GGWCC	2 cut(s)	455, 818
Eco57I	CTGAAG	2 cut(s)	56, 1008
Eco81I	CCTNAGG	2 cut(s)	822, 1428
Eco88I	CYCGRG	3 cut(s)	80, 1088, 1373
EcoO109I	RGGNCCY	3 cut(s)	818, 835, 1161
EcoRII	CCWGG	1 cut(s)	831
EcoT14I	CCWWGG	1 cut(s)	469
EcoT22I	ATGCAT	1 cut(s)	121
EcoT38I	GRGCYC	1 cut(s)	1165
ErhI	CCWWGG	1 cut(s)	469
FaeI	CATG	7 cut(s)	449, 688, 1001, 1073, 1087, 1102, 1610
FalI	AAGNNNNNCTT	2 cut(s)	643, 675
FaqI	GGGAC	2 cut(s)	540, 1225
FatI	CATG	7 cut(s)	445, 684, 997, 1069, 1083, 1098, 1606
FbaI	TGATCA	1 cut(s)	606
FblI	GTMKAC	1 cut(s)	1634
Fnu4HI	GCNGC	7 cut(s)	237, 615, 810, 855, 933, 1095, 1501
FokI	GGATG	5 cut(s)	327, 922, 1235, 1489, 1496
FriOI	GRGCYC	1 cut(s)	1165
Fsp4HI	GCNGC	7 cut(s)	237, 615, 810, 855, 933, 1095, 1501
FspBI	CTAG	9 cut(s)	240, 288, 345, 405, 861, 1301, 1391, 1403, 1693
FspI	TGCGCA	1 cut(s)	755
GlaI	GCGC	3 cut(s)	52, 159, 755
GluI	GCNGC	7 cut(s)	237, 615, 810, 855, 933, 1095, 1501
GsuI	CTGGAG	1 cut(s)	1352
HaeII	RGCGCY	2 cut(s)	54, 161
HapII	CCGG	8 cut(s)	48, 161, 203, 939, 973, 1474, 1481, 1504
HgaI	GACGC	3 cut(s)	68, 1227, 1407
HhaI	GCGC	3 cut(s)	53, 160, 756
Hin1I	GRCGYC	1 cut(s)	60
Hin1II	CATG	7 cut(s)	449, 688, 1001, 1073, 1087, 1102, 1610
Hin6I	GCGC	3 cut(s)	51, 158, 754
HinP1I	GCGC	3 cut(s)	51, 158, 754
HincII	GTYRAC	1 cut(s)	1635
HindII	GTYRAC	1 cut(s)	1635
HinfI	GANTC	6 cut(s)	13, 199, 275, 881, 982, 1631
HpaII	CCGG	8 cut(s)	48, 161, 203, 939, 973, 1474, 1481, 1504
HphI	GGTGA	6 cut(s)	37, 107, 858, 1173, 1576, 1600
Hpy166II	GTNNAC	3 cut(s)	866, 1175, 1635
Hpy188III	TCNNGA	9 cut(s)	17, 396, 578, 824, 939, 986, 1115, 1331, 1474
Hpy8I	GTNNAC	3 cut(s)	866, 1175, 1635
Hpy99I	CGWCG	2 cut(s)	68, 1497
HpyAV	CCTTC	5 cut(s)	80, 125, 1047, 1194, 1475
HpyCH4III	ACNGT	1 cut(s)	478
HpyCH4IV	ACGT	6 cut(s)	151, 292, 928, 1171, 1294, 1492
HpyCH4V	TGCA	8 cut(s)	119, 236, 518, 800, 932, 1001, 1246, 1409
HpyF10VI	GCNNNNNNNGC	7 cut(s)	48, 59, 116, 623, 806, 1322, 1415
HpyF3I	CTNAG	8 cut(s)	642, 822, 1041, 1062, 1152, 1197, 1287, 1428
HpySE526I	ACGT	6 cut(s)	151, 292, 928, 1171, 1294, 1492
Hsp92I	GRCGYC	1 cut(s)	60
Hsp92II	CATG	7 cut(s)	449, 688, 1001, 1073, 1087, 1102, 1610
HspAI	GCGC	3 cut(s)	51, 158, 754
Kpn2I	TCCGGA	2 cut(s)	938, 1473
Ksp22I	TGATCA	1 cut(s)	606
Kzo9I	GATC	9 cut(s)	97, 136, 307, 401, 606, 647, 941, 964, 1645
LmnI	GCTCC	8 cut(s)	85, 211, 418, 791, 955, 1018, 1387, 1432
Lsp1109I	GCAGC	6 cut(s)	248, 601, 796, 866, 944, 1106
LweI	GCATC	7 cut(s)	51, 97, 400, 944, 1273, 1396, 1467
MaeI	CTAG	9 cut(s)	240, 288, 345, 405, 861, 1301, 1391, 1403, 1693
MaeII	ACGT	6 cut(s)	151, 292, 928, 1171, 1294, 1492
MaeIII	GTNAC	5 cut(s)	430, 460, 653, 715, 802
MalI	GATC	9 cut(s)	99, 138, 309, 403, 608, 649, 943, 966, 1647
MboI	GATC	9 cut(s)	97, 136, 307, 401, 606, 647, 941, 964, 1645
MfeI	CAATTG	1 cut(s)	246
MflI	RGATCY	1 cut(s)	941
MhlI	GDGCHC	1 cut(s)	1165
MluCI	AATT	1 cut(s)	246
MlyI	GAGTC	3 cut(s)	875, 991, 1640
Mph1103I	ATGCAT	1 cut(s)	121
MroI	TCCGGA	2 cut(s)	938, 1473
MseI	TTAA	6 cut(s)	102, 165, 375, 1008, 1512, 1640
MslI	CAYNNNNRTG	1 cut(s)	93
MspA1I	CMGCKG	2 cut(s)	737, 1016
MspI	CCGG	8 cut(s)	48, 161, 203, 939, 973, 1474, 1481, 1504
MspR9I	CCNGG	2 cut(s)	833, 973
MunI	CAATTG	1 cut(s)	246
Mva1269I	GAATGC	3 cut(s)	121, 1110, 1459
MvaI	CCWGG	1 cut(s)	833
MwoI	GCNNNNNNNGC	7 cut(s)	48, 59, 116, 623, 806, 1322, 1415
NciI	CCSGG	1 cut(s)	973
NdeII	GATC	9 cut(s)	97, 136, 307, 401, 606, 647, 941, 964, 1645
NlaIII	CATG	7 cut(s)	449, 688, 1001, 1073, 1087, 1102, 1610
NlaIV	GGNNCC	7 cut(s)	207, 456, 951, 1163, 1434, 1499, 1508
NmeAIII	GCCGAG	1 cut(s)	1182
NmuCI	GTSAC	2 cut(s)	430, 802
NsbI	TGCGCA	1 cut(s)	755
NsiI	ATGCAT	1 cut(s)	121
NspI	RCATGY	2 cut(s)	1001, 1610
PaeI	GCATGC	1 cut(s)	1610
PaeR7I	CTCGAG	3 cut(s)	80, 1088, 1373
PceI	AGGCCT	2 cut(s)	626, 773
PctI	GAATGC	3 cut(s)	121, 1110, 1459
PfeI	GAWTC	3 cut(s)	13, 199, 275
PflFI	GACNNNGTC	1 cut(s)	62
PfoI	TCCNGGA	1 cut(s)	971
PkrI	GCNGC	7 cut(s)	238, 616, 811, 856, 934, 1096, 1502
PleI	GAGTC	3 cut(s)	875, 990, 1639
PpsI	GAGTC	3 cut(s)	875, 990, 1639
Ppu21I	YACGTR	1 cut(s)	152
PpuMI	RGGWCCY	1 cut(s)	818
PshBI	ATTAAT	1 cut(s)	1008
Psp5II	RGGWCCY	1 cut(s)	818
Psp6I	CCWGG	1 cut(s)	831
PspGI	CCWGG	1 cut(s)	831
PspN4I	GGNNCC	7 cut(s)	207, 456, 951, 1163, 1434, 1499, 1508
PspOMI	GGGCCC	1 cut(s)	1161
PspPI	GGNCC	7 cut(s)	389, 455, 818, 835, 1161, 1162, 1498
PspPPI	RGGWCCY	1 cut(s)	818
PspXI	VCTCGAGB	3 cut(s)	80, 1088, 1373
PstI	CTGCAG	1 cut(s)	802
PstNI	CAGNNNCTG	2 cut(s)	806, 838
PsuI	RGATCY	1 cut(s)	941
PsyI	GACNNNGTC	1 cut(s)	62
RsaI	GTAC	1 cut(s)	150
RsaNI	GTAC	1 cut(s)	149
RseI	CAYNNNNRTG	1 cut(s)	93
SalI	GTCGAC	1 cut(s)	1633
SaqAI	TTAA	6 cut(s)	102, 165, 375, 1008, 1512, 1640
SatI	GCNGC	7 cut(s)	237, 615, 810, 855, 933, 1095, 1501
Sau3AI	GATC	9 cut(s)	97, 136, 307, 401, 606, 647, 941, 964, 1645
Sau96I	GGNCC	7 cut(s)	389, 455, 818, 835, 1161, 1162, 1498
SchI	GAGTC	3 cut(s)	875, 991, 1640
ScrFI	CCNGG	2 cut(s)	833, 973
SduI	GDGCHC	1 cut(s)	1165
SfaNI	GCATC	7 cut(s)	51, 97, 400, 944, 1273, 1396, 1467
SfcI	CTRYAG	3 cut(s)	366, 558, 798
Sfr274I	CTCGAG	3 cut(s)	80, 1088, 1373
SgrAI	CRCCGGYG	1 cut(s)	47
SinI	GGWCC	2 cut(s)	455, 818
SlaI	CTCGAG	3 cut(s)	80, 1088, 1373
SmiMI	CAYNNNNRTG	1 cut(s)	93
SmlI	CTYRAG	6 cut(s)	80, 813, 1088, 1373, 1437, 1682
SmoI	CTYRAG	6 cut(s)	80, 813, 1088, 1373, 1437, 1682
SphI	GCATGC	1 cut(s)	1610
Sse9I	AATT	1 cut(s)	246
SseBI	AGGCCT	2 cut(s)	626, 773
SsiI	CCGC	3 cut(s)	737, 1016, 1501
SspMI	CTAG	9 cut(s)	240, 288, 345, 405, 861, 1301, 1391, 1403, 1693
StuI	AGGCCT	2 cut(s)	626, 773
StyD4I	CCNGG	2 cut(s)	831, 971
StyI	CCWWGG	1 cut(s)	469
TaaI	ACNGT	1 cut(s)	478
TaiI	ACGT	6 cut(s)	154, 295, 931, 1174, 1297, 1495
TaqI	TCGA	6 cut(s)	27, 81, 139, 1089, 1374, 1634
TaqII	GACCGA	1 cut(s)	1269
TasI	AATT	1 cut(s)	246
TauI	GCSGC	1 cut(s)	1503
TfiI	GAWTC	3 cut(s)	13, 199, 275
Tru1I	TTAA	6 cut(s)	102, 165, 375, 1008, 1512, 1640
Tru9I	TTAA	6 cut(s)	102, 165, 375, 1008, 1512, 1640
TscAI	CASTG	4 cut(s)	117, 391, 807, 1033
TseFI	GTSAC	2 cut(s)	430, 802
TseI	GCWGC	6 cut(s)	236, 614, 809, 854, 932, 1094
Tsp45I	GTSAC	2 cut(s)	430, 802
TspDTI	ATGAA	7 cut(s)	25, 192, 504, 1047, 1089, 1283, 1461
TspGWI	ACGGA	2 cut(s)	318, 858
TspRI	CASTG	4 cut(s)	117, 391, 807, 1033
Tth111I	GACNNNGTC	1 cut(s)	62
VpaK11BI	GGWCC	2 cut(s)	455, 818
VspI	ATTAAT	1 cut(s)	1008
XceI	RCATGY	2 cut(s)	1001, 1610
XhoI	CTCGAG	3 cut(s)	80, 1088, 1373
XmiI	GTMKAC	1 cut(s)	1634
XspI	CTAG	9 cut(s)	240, 288, 345, 405, 861, 1301, 1391, 1403, 1693
Zsp2I	ATGCAT	1 cut(s)	121

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.