Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0009394

Physical Location & Seq

Genomic Coordinates Reverse (-)

51484101 .. 51489256

Gene Structure 5156 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00257060.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1767 bp

ATGGCGACGCCTAATCAGGAAGCAATCGACACCTTCATCGGCATCACTGGGGCCACCTCCGCCGCCGCCGCGCGAAAGCTCGAGGAGCATGGAGGCAATCTCAATGAAGCTGTGAATGCATATTTCAGTGAAGGAGATAGAAACGCATCAGTGAATGTGCATGAGACACCTGTTCTTGATCAAGATGATTTCATGGACATAGATGATCCGGATCTAGTTGGATCCCATAGAAATCCTCTACCACTTCTAGCTGCAGCCAGAGATATCAATCCATTTTCTTATCTTGAGAACCTTGGTAGAAGTGTCTTTGAAAGTAGTACTGATATAACAAACCGTACACCATTTGTTTCTCATCCAAGAGAAGTGAGGGAAATTCCCATAGAAGTCAAGGATGGCAGTCATTCATCTGATCATTCTGAGCATGCTCCTAAAATTGATGATGTTACTGGAACAGTGGAGGCATACGGCCCAGGTGTCAGTGGAACGGTTATAGTTGATGATGACGATGATGATGTTGCAGCTGCCCCAACTGTTCGGGCAGGGCAAGGGAGCGGACCAAGAGATAACTCTTCAGGTGATGGATCTCATCACCAGACTTTTGCACCCAGTGCTCCTCGATTTGATGATCCTAGCAATGATATTGAAGAACAAATGATTCGAGCTGCTATTGAGGCTTCAAAACGGGAGGTTGAGGCAAACCACTCAAATCACCAATTTGGTGTACCAAATGAGTTTGATGATGTTGAGCCTGAGCAAAGACAGTCTCACCTAGAGGATCCTGAACTTGCACATGTAGTTTCATTCAGAGCAAGAGAAAGCATTCCGCGAGCAGGGGGAAATGTTAGACCTGCAGAGATGGGTGCTTCTAAGGAAGCTGAGGTGGAGCTGGCTAAAGTAGCAGCACCAAATGGAAGCTTGGAGGCAGGAAGCTCGTCTATCAGAGATGATACTGAAGATGTGGAGGAGCAGCCTCTTGTCAGGCACAGGTCCAGGCGCATGCCTCCTGGGTCTGTGGAGTCTTCCAAAGAATTTGGACCTAGTGAGACTAGCGCACCTTCTAGTCCTGGAGAGCAGGATATGGGTAATCATCCTAGTCATGATGGCGGTGCCTTCCCTTCTGACGAGTGGGGAGGCATGTCTTCACAGGAGCATGATGAAGCAGTGATGCTTGAGGCTGCAATGTTTGGTGGAATCCCTGAAGGGTCTGGATATCGCATTCCCTATGCGCCTCATCAATTTATGCAACCAGAGAGTCCGTATCCCCTGCCAGTACCTCGTCCCCCATCACCCTCTCTGACGGCACAGCGAATGATACGGGAACAACAGGATGATGAATATCTTGCATCACTGCAAGCTGACAGAGAAAAGGAACTGAAGGCTATTGAGGAAGCTGAAGCTCGTCGCGAAGCAGAAAGACAAGAAGAGGAAGAATCTCGGAGGAAAGTTGAGGAGGAGCAGGAATTGGAGAGACAATTAGCAGCAAAAGAAGCTACTCTCCCTCAAGAACCAGCATCAGATGATGTGAATGCTGTAACCCTTCTGGTGCGAATGCCAGATGGCAGCCGCCATGGTCGTCGATTTCTTAAGACTGATAAGTTGCAGTCTCTTTTCAACTTCATAGATATTGGCAGAAGAGTGAAACCTGGCTCTTACAGAGTGGTGAGGCCGTTCCCTAGGCGTGCTTTCAGCGATGGAGACAGTGCATTGTCATTGAATGAACTTGGCCTGACCAGCAAGCAAGAAGCTTTGTTTTTGGAGTTGATATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006810 GO:0008150 GO:0016192 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0051179 GO:0051234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UBA_4 UBX

Protein Analysis

588

Amino Acids

64.41

Weight (kDa)

4.66

Isoelectric Point (pI)

55.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UBA_4	PF14555	6 - 47	1.1e-11	UBA-like domain
UBX	PF00789	508 - 586	2e-18	UBX domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009394)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G11740 AT4G11740 AT4G23040
fragaria_vesca	FvH4_5g01560
malus_domestica	MD04G1066700.v1.1 MD06G1073600.v1.1
prunus_persica	Prupe.5G091800_v2.0.a1 Prupe.5G091800_v2.0.a1
pyrus_communis	pycom04g05990 pycom06g07280
rosa_chinensis	RchiOBHm_Chr7g0199121
rosa_laevigata	RLG00000003813
rosa_multiflora	Rmu_sc0006266.1_g000051
rosa_roxburghii	Rroxscaffold_3G00257060
rosa_rugosa	Rorug07G0052800 Rorug07G0052900
rosa_samantha	Rh7AG176300 Rh7BG179800 Rh7CG185400 Rh7DG179300
rosa_wichuraiana	Rw7G015470 Rw7G015500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	856
AccB1I	GGYRCC	1 cut(s)	1106
AccBSI	CCGCTC	1 cut(s)	552
AccII	CGCG	4 cut(s)	71, 73, 826, 1404
AccIII	TCCGGA	1 cut(s)	208
AciI	CCGC	8 cut(s)	60, 63, 66, 69, 552, 824, 1104, 1564
AclWI	GGATC	8 cut(s)	200, 216, 219, 229, 589, 620, 770, 783
AcsI	RAATTY	2 cut(s)	372, 1028
AcuI	CTGAAG	5 cut(s)	555, 972, 1218, 1394, 1413
AcyI	GRCGYC	1 cut(s)	8
AdeI	CACNNNGTG	1 cut(s)	608
AfaI	GTAC	4 cut(s)	319, 337, 723, 1272
AfiI	CCNNNNNNNGG	1 cut(s)	830
AflII	CTTAAG	1 cut(s)	1583
AflIII	ACRYGT	1 cut(s)	790
AgsI	TTSAA	5 cut(s)	311, 644, 678, 1612, 1714
AjnI	CCWGG	5 cut(s)	469, 989, 1003, 1063, 1642
Alw21I	GWGCWC	1 cut(s)	613
Alw26I	GTCTC	6 cut(s)	158, 768, 1037, 1462, 1608, 1689
AlwI	GGATC	8 cut(s)	200, 216, 219, 229, 589, 620, 770, 783
Ama87I	CYCGRG	1 cut(s)	80
Aor13HI	TCCGGA	1 cut(s)	208
AoxI	GGCC	4 cut(s)	51, 466, 1664, 1723
ApoI	RAATTY	2 cut(s)	372, 1028
Asp700I	GAANNNNTTC	1 cut(s)	819
AspA2I	CCTAGG	1 cut(s)	1673
AspLEI	GCGC	4 cut(s)	73, 996, 1052, 1228
AspS9I	GGNCC	5 cut(s)	51, 467, 554, 987, 1034
AsuHPI	GGTGA	6 cut(s)	581, 587, 701, 758, 1278, 1672
AvaI	CYCGRG	1 cut(s)	80
AvaII	GGWCC	3 cut(s)	554, 987, 1034
AvrII	CCTAGG	1 cut(s)	1673
BamHI	GGATCC	2 cut(s)	221, 775
BanI	GGYRCC	1 cut(s)	1106
BbsI	GAAGAC	2 cut(s)	1011, 1131
Bbv12I	GWGCWC	1 cut(s)	613
BbvCI	CCTCAGC	1 cut(s)	876
BccI	CCATC	7 cut(s)	386, 572, 850, 1094, 1291, 1550, 1685
BceAI	ACGGC	3 cut(s)	481, 1314, 1651
BcgI	CGANNNNNNTGC	2 cut(s)	912, 946
BciT130I	CCWGG	5 cut(s)	471, 991, 1005, 1065, 1644
BciVI	GTATCC	1 cut(s)	1269
BclI	TGATCA	2 cut(s)	178, 409
BcoDI	GTCTC	6 cut(s)	158, 768, 1037, 1462, 1608, 1689
BfaI	CTAG	9 cut(s)	215, 248, 630, 770, 1038, 1047, 1059, 1092, 1674
BfmI	CTRYAG	2 cut(s)	252, 849
BfrI	CTTAAG	1 cut(s)	1583
BfuAI	ACCTGC	1 cut(s)	856
BfuI	GTATCC	1 cut(s)	1269
BlnI	CCTAGG	1 cut(s)	1673
BmcAI	AGTACT	1 cut(s)	319
Bme1390I	CCNGG	5 cut(s)	471, 991, 1005, 1065, 1644
Bme18I	GGWCC	3 cut(s)	554, 987, 1034
BmeT110I	CYCGRG	1 cut(s)	80
BmgT120I	GGNCC	5 cut(s)	51, 467, 554, 987, 1034
BmiI	GGNNCC	4 cut(s)	52, 223, 777, 1108
BmrFI	CCNGG	5 cut(s)	471, 991, 1005, 1065, 1644
BmrI	ACTGGG	2 cut(s)	57, 600
BmsI	GCATC	5 cut(s)	51, 155, 1155, 1352, 1520
BmuI	ACTGGG	2 cut(s)	57, 600
BpiI	GAAGAC	2 cut(s)	1011, 1131
BplI	GAGNNNNNCTC	2 cut(s)	84, 116
BpmI	CTGGAG	1 cut(s)	1086
Bpu10I	CCTNAGC	2 cut(s)	750, 876
BpuEI	CTTGAG	3 cut(s)	305, 1190, 1485
BsaBI	GATNNNNATC	3 cut(s)	210, 267, 1335
BsaHI	GRCGYC	1 cut(s)	8
BsaJI	CCNNGG	5 cut(s)	292, 469, 1004, 1567, 1673
BsaWI	WCCGGW	1 cut(s)	208
Bsc4I	CCNNNNNNNGG	1 cut(s)	830
Bse1I	ACTGG	4 cut(s)	52, 451, 606, 1268
Bse3DI	GCAATG	2 cut(s)	640, 1185
Bse8I	GATNNNNATC	3 cut(s)	210, 267, 1335
BseAI	TCCGGA	1 cut(s)	208
BseBI	CCWGG	5 cut(s)	471, 991, 1005, 1065, 1644
BseDI	CCNNGG	5 cut(s)	292, 469, 1004, 1567, 1673
BseGI	GGATG	4 cut(s)	352, 397, 1087, 1333
BseJI	GATNNNNATC	3 cut(s)	210, 267, 1335
BseLI	CCNNNNNNNGG	1 cut(s)	830
BseMI	GCAATG	2 cut(s)	640, 1185
BseMII	CTCAG	3 cut(s)	408, 741, 867
BseNI	ACTGG	4 cut(s)	52, 451, 606, 1268
BseRI	GAGGAG	5 cut(s)	98, 603, 977, 1463, 1466
Bsh1236I	CGCG	4 cut(s)	71, 73, 826, 1404
BshFI	GGCC	4 cut(s)	53, 468, 1666, 1725
BshNI	GGYRCC	1 cut(s)	1106
BsiHKAI	GWGCWC	1 cut(s)	613
BsiHKCI	CYCGRG	1 cut(s)	80
BsiSI	CCGG	1 cut(s)	209
BslFI	GGGAC	1 cut(s)	1263
BslI	CCNNNNNNNGG	1 cut(s)	830
BsmAI	GTCTC	6 cut(s)	158, 768, 1037, 1462, 1608, 1689
BsmFI	GGGAC	1 cut(s)	1263
BsmI	GAATGC	5 cut(s)	121, 819, 1215, 1531, 1554
BsnI	GGCC	4 cut(s)	53, 468, 1666, 1725
BsoBI	CYCGRG	1 cut(s)	80
Bsp1286I	GDGCHC	1 cut(s)	613
Bsp13I	TCCGGA	1 cut(s)	208
Bsp143I	GATC	8 cut(s)	178, 205, 211, 221, 409, 581, 625, 775
Bsp19I	CCATGG	1 cut(s)	1567
Bsp68I	TCGCGA	1 cut(s)	1404
BspACI	CCGC	8 cut(s)	60, 63, 66, 69, 552, 824, 1104, 1564
BspANI	GGCC	4 cut(s)	53, 468, 1666, 1725
BspCNI	CTCAG	3 cut(s)	409, 742, 868
BspEI	TCCGGA	1 cut(s)	208
BspFNI	CGCG	4 cut(s)	71, 73, 826, 1404
BspHI	TCATGA	1 cut(s)	1096
BspLI	GGNNCC	4 cut(s)	52, 223, 777, 1108
BspMAI	CTGCAG	2 cut(s)	256, 853
BspMI	ACCTGC	1 cut(s)	856
BspPI	GGATC	8 cut(s)	200, 216, 219, 229, 589, 620, 770, 783
BspT107I	GGYRCC	1 cut(s)	1106
BspTI	CTTAAG	1 cut(s)	1583
BsrBI	CCGCTC	1 cut(s)	552
BsrDI	GCAATG	2 cut(s)	640, 1185
BsrI	ACTGG	4 cut(s)	52, 451, 606, 1268
BssECI	CCNNGG	5 cut(s)	292, 469, 1004, 1567, 1673
BssMI	GATC	8 cut(s)	178, 205, 211, 221, 409, 581, 625, 775
BssNI	GRCGYC	1 cut(s)	8
BssT1I	CCWWGG	3 cut(s)	292, 1567, 1673
Bst2UI	CCWGG	5 cut(s)	471, 991, 1005, 1065, 1644
Bst4CI	ACNGT	6 cut(s)	335, 454, 487, 532, 762, 1700
Bst6I	CTCTTC	3 cut(s)	574, 1416, 1627
BstACI	GRCGYC	1 cut(s)	8
BstAFI	CTTAAG	1 cut(s)	1583
BstAPI	GCANNNNNTGC	1 cut(s)	608
BstC8I	GCNNGC	7 cut(s)	423, 828, 888, 998, 1353, 1680, 1736
BstDEI	CTNAG	4 cut(s)	417, 750, 867, 876
BstDSI	CCRYGG	1 cut(s)	1567
BstF5I	GGATG	4 cut(s)	352, 397, 1087, 1333
BstFNI	CGCG	4 cut(s)	71, 73, 826, 1404
BstHHI	GCGC	4 cut(s)	73, 996, 1052, 1228
BstKTI	GATC	8 cut(s)	181, 208, 214, 224, 412, 584, 628, 778
BstMAI	GTCTC	6 cut(s)	158, 768, 1037, 1462, 1608, 1689
BstMBI	GATC	8 cut(s)	178, 205, 211, 221, 409, 581, 625, 775
BstMWI	GCNNNNNNNGC	9 cut(s)	59, 68, 85, 116, 608, 671, 896, 1487, 1731
BstNI	CCWGG	5 cut(s)	471, 991, 1005, 1065, 1644
BstNSI	RCATGY	4 cut(s)	425, 794, 1000, 1138
BstSCI	CCNGG	5 cut(s)	469, 989, 1003, 1063, 1642
BstSFI	CTRYAG	2 cut(s)	252, 849
BstUI	CGCG	4 cut(s)	71, 73, 826, 1404
BstV2I	GAAGAC	2 cut(s)	1011, 1131
BstX2I	RGATCY	4 cut(s)	211, 221, 581, 775
BstYI	RGATCY	4 cut(s)	211, 221, 581, 775
BsuI	GTATCC	1 cut(s)	1269
BsuRI	GGCC	4 cut(s)	53, 468, 1666, 1725
BtgI	CCRYGG	1 cut(s)	1567
BtgZI	GCGATG	1 cut(s)	1704
BtsCI	GGATG	4 cut(s)	352, 397, 1087, 1333
BtsI	GCAGTG	2 cut(s)	1167, 1346
BtsIMutI	CAGTG	9 cut(s)	45, 133, 156, 459, 484, 613, 1167, 1346, 1705
BtuMI	TCGCGA	1 cut(s)	1404
BveI	ACCTGC	1 cut(s)	856
Cac8I	GCNNGC	7 cut(s)	423, 828, 888, 998, 1353, 1680, 1736
CciI	TCATGA	1 cut(s)	1096
CfoI	GCGC	4 cut(s)	73, 996, 1052, 1228
Cfr13I	GGNCC	5 cut(s)	51, 467, 554, 987, 1034
CseI	GACGC	1 cut(s)	16
Csp6I	GTAC	4 cut(s)	318, 336, 722, 1271
CviQI	GTAC	4 cut(s)	318, 336, 722, 1271
DdeI	CTNAG	4 cut(s)	417, 750, 867, 876
DpnI	GATC	8 cut(s)	180, 207, 213, 223, 411, 583, 627, 777
DpnII	GATC	8 cut(s)	178, 205, 211, 221, 409, 581, 625, 775
DraIII	CACNNNGTG	1 cut(s)	608
Eam1104I	CTCTTC	3 cut(s)	574, 1416, 1627
EarI	CTCTTC	3 cut(s)	574, 1416, 1627
EciI	GGCGGA	1 cut(s)	49
Eco130I	CCWWGG	3 cut(s)	292, 1567, 1673
Eco32I	GATATC	2 cut(s)	265, 1211
Eco47I	GGWCC	3 cut(s)	554, 987, 1034
Eco57I	CTGAAG	5 cut(s)	555, 972, 1218, 1394, 1413
Eco88I	CYCGRG	1 cut(s)	80
EcoRII	CCWGG	5 cut(s)	469, 989, 1003, 1063, 1642
EcoRV	GATATC	2 cut(s)	265, 1211
EcoT14I	CCWWGG	3 cut(s)	292, 1567, 1673
EcoT22I	ATGCAT	1 cut(s)	121
ErhI	CCWWGG	3 cut(s)	292, 1567, 1673
FaqI	GGGAC	1 cut(s)	1263
FbaI	TGATCA	2 cut(s)	178, 409
FokI	GGATG	4 cut(s)	339, 404, 1074, 1340
FspBI	CTAG	9 cut(s)	215, 248, 630, 770, 1038, 1047, 1059, 1092, 1674
GlaI	GCGC	4 cut(s)	72, 995, 1051, 1227
GsuI	CTGGAG	1 cut(s)	1086
HaeIII	GGCC	4 cut(s)	53, 468, 1666, 1725
HapII	CCGG	1 cut(s)	209
HgaI	GACGC	1 cut(s)	16
HhaI	GCGC	4 cut(s)	73, 996, 1052, 1228
Hin1I	GRCGYC	1 cut(s)	8
Hin6I	GCGC	4 cut(s)	71, 994, 1050, 1226
HinP1I	GCGC	4 cut(s)	71, 994, 1050, 1226
HindIII	AAGCTT	2 cut(s)	913, 1743
HinfI	GANTC	5 cut(s)	655, 1016, 1191, 1252, 1430
HpaII	CCGG	1 cut(s)	209
HphI	GGTGA	6 cut(s)	581, 587, 701, 758, 1278, 1672
Hpy166II	GTNNAC	2 cut(s)	338, 722
Hpy188I	TCNGA	8 cut(s)	409, 418, 806, 941, 1120, 1296, 1437, 1516
Hpy8I	GTNNAC	2 cut(s)	338, 722
Hpy99I	CGWCG	3 cut(s)	10, 1404, 1578
HpyAV	CCTTC	8 cut(s)	43, 125, 1065, 1120, 1125, 1193, 1369, 1547
HpyCH4III	ACNGT	6 cut(s)	335, 454, 487, 532, 762, 1700
HpyF10VI	GCNNNNNNNGC	9 cut(s)	59, 68, 85, 116, 608, 671, 896, 1487, 1731
HpyF3I	CTNAG	4 cut(s)	417, 750, 867, 876
Hsp92I	GRCGYC	1 cut(s)	8
HspAI	GCGC	4 cut(s)	71, 994, 1050, 1226
Kpn2I	TCCGGA	1 cut(s)	208
Ksp22I	TGATCA	2 cut(s)	178, 409
Kzo9I	GATC	8 cut(s)	178, 205, 211, 221, 409, 581, 625, 775
LmnI	GCTCC	8 cut(s)	85, 430, 549, 616, 883, 964, 1147, 1453
LweI	GCATC	5 cut(s)	51, 155, 1155, 1352, 1520
MaeI	CTAG	9 cut(s)	215, 248, 630, 770, 1038, 1047, 1059, 1092, 1674
MaeIII	GTNAC	2 cut(s)	442, 1531
MalI	GATC	8 cut(s)	180, 207, 213, 223, 411, 583, 627, 777
MbiI	CCGCTC	1 cut(s)	552
MboI	GATC	8 cut(s)	178, 205, 211, 221, 409, 581, 625, 775
MboII	GAAGA	8 cut(s)	561, 656, 965, 1011, 1131, 1433, 1439, 1644
MflI	RGATCY	4 cut(s)	211, 221, 581, 775
MhlI	GDGCHC	1 cut(s)	613
MluCI	AATT	7 cut(s)	372, 432, 713, 1028, 1235, 1460, 1472
MlyI	GAGTC	2 cut(s)	1025, 1261
MmeI	TCCRAC	1 cut(s)	199
Mph1103I	ATGCAT	1 cut(s)	121
MroI	TCCGGA	1 cut(s)	208
MroXI	GAANNNNTTC	1 cut(s)	819
MseI	TTAA	1 cut(s)	1584
MspA1I	CMGCKG	1 cut(s)	521
MspCI	CTTAAG	1 cut(s)	1583
MspI	CCGG	1 cut(s)	209
MspR9I	CCNGG	5 cut(s)	471, 991, 1005, 1065, 1644
Mva1269I	GAATGC	5 cut(s)	121, 819, 1215, 1531, 1554
MvaI	CCWGG	5 cut(s)	471, 991, 1005, 1065, 1644
MvnI	CGCG	4 cut(s)	71, 73, 826, 1404
MwoI	GCNNNNNNNGC	9 cut(s)	59, 68, 85, 116, 608, 671, 896, 1487, 1731
NcoI	CCATGG	1 cut(s)	1567
NdeII	GATC	8 cut(s)	178, 205, 211, 221, 409, 581, 625, 775
NlaIV	GGNNCC	4 cut(s)	52, 223, 777, 1108
NruI	TCGCGA	1 cut(s)	1404
NsiI	ATGCAT	1 cut(s)	121
NspI	RCATGY	4 cut(s)	425, 794, 1000, 1138
PaeI	GCATGC	2 cut(s)	425, 1000
PaeR7I	CTCGAG	1 cut(s)	80
PagI	TCATGA	1 cut(s)	1096
PciI	ACATGT	1 cut(s)	790
PctI	GAATGC	5 cut(s)	121, 819, 1215, 1531, 1554
PdmI	GAANNNNTTC	1 cut(s)	819
PfeI	GAWTC	3 cut(s)	655, 1191, 1430
PfoI	TCCNGGA	1 cut(s)	1063
PleI	GAGTC	2 cut(s)	1024, 1260
PpsI	GAGTC	2 cut(s)	1024, 1260
PscI	ACATGT	1 cut(s)	790
Psp6I	CCWGG	5 cut(s)	469, 989, 1003, 1063, 1642
PspGI	CCWGG	5 cut(s)	469, 989, 1003, 1063, 1642
PspN4I	GGNNCC	4 cut(s)	52, 223, 777, 1108
PspPI	GGNCC	5 cut(s)	51, 467, 554, 987, 1034
PspXI	VCTCGAGB	1 cut(s)	80
PstI	CTGCAG	2 cut(s)	256, 853
PsuI	RGATCY	4 cut(s)	211, 221, 581, 775
PvuII	CAGCTG	1 cut(s)	521
RruI	TCGCGA	1 cut(s)	1404
RsaI	GTAC	4 cut(s)	319, 337, 723, 1272
RsaNI	GTAC	4 cut(s)	318, 336, 722, 1271
SaqAI	TTAA	1 cut(s)	1584
Sau3AI	GATC	8 cut(s)	178, 205, 211, 221, 409, 581, 625, 775
Sau96I	GGNCC	5 cut(s)	51, 467, 554, 987, 1034
ScaI	AGTACT	1 cut(s)	319
SchI	GAGTC	2 cut(s)	1025, 1261
ScrFI	CCNGG	5 cut(s)	471, 991, 1005, 1065, 1644
SduI	GDGCHC	1 cut(s)	613
SfaNI	GCATC	5 cut(s)	51, 155, 1155, 1352, 1520
SfcI	CTRYAG	2 cut(s)	252, 849
Sfr274I	CTCGAG	1 cut(s)	80
SinI	GGWCC	3 cut(s)	554, 987, 1034
SlaI	CTCGAG	1 cut(s)	80
SmlI	CTYRAG	5 cut(s)	80, 284, 1169, 1500, 1583
SmoI	CTYRAG	5 cut(s)	80, 284, 1169, 1500, 1583
SphI	GCATGC	2 cut(s)	425, 1000
Sse9I	AATT	7 cut(s)	372, 432, 713, 1028, 1235, 1460, 1472
SsiI	CCGC	8 cut(s)	60, 63, 66, 69, 552, 824, 1104, 1564
SspMI	CTAG	9 cut(s)	215, 248, 630, 770, 1038, 1047, 1059, 1092, 1674
StyD4I	CCNGG	5 cut(s)	469, 989, 1003, 1063, 1642
StyI	CCWWGG	3 cut(s)	292, 1567, 1673
TaaI	ACNGT	6 cut(s)	335, 454, 487, 532, 762, 1700
TaqI	TCGA	5 cut(s)	27, 81, 616, 658, 1576
TasI	AATT	7 cut(s)	372, 432, 713, 1028, 1235, 1460, 1472
TatI	WGTACW	1 cut(s)	317
TauI	GCSGC	4 cut(s)	65, 68, 71, 1566
TfiI	GAWTC	3 cut(s)	655, 1191, 1430
Tru1I	TTAA	1 cut(s)	1584
Tru9I	TTAA	1 cut(s)	1584
TscAI	CASTG	9 cut(s)	52, 133, 156, 459, 484, 613, 1167, 1353, 1705
TspDTI	ATGAA	9 cut(s)	25, 120, 181, 393, 789, 1170, 1347, 1606, 1731
TspGWI	ACGGA	1 cut(s)	1245
TspRI	CASTG	9 cut(s)	52, 133, 156, 459, 484, 613, 1167, 1353, 1705
Vha464I	CTTAAG	1 cut(s)	1583
VpaK11BI	GGWCC	3 cut(s)	554, 987, 1034
XapI	RAATTY	2 cut(s)	372, 1028
XceI	RCATGY	4 cut(s)	425, 794, 1000, 1138
XhoI	CTCGAG	1 cut(s)	80
XmaJI	CCTAGG	1 cut(s)	1673
XmnI	GAANNNNTTC	1 cut(s)	819
XspI	CTAG	9 cut(s)	215, 248, 630, 770, 1038, 1047, 1059, 1092, 1674
ZrmI	AGTACT	1 cut(s)	319
Zsp2I	ATGCAT	1 cut(s)	121

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.