Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0009394

Physical Location & Seq

Genomic Coordinates Forward (+)

15472727 .. 15478074

Gene Structure 5348 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG176300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1770 bp

ATGGCGACGCCTAATCAGGAAGCAATCGACACCTTCATCGGCATCACCGGCGCCACCGCCGCCGCCGCCGCGCGAAAGCTCGAGGAGCATGGAGGCAATCTCAATGAAGCTGTGAATGCATATTTCAGTGAAGGAGATAGAAACACATCAGTGAATGTGCATGAGACACCTGTTCTTGATCAAGATGATTTCATGGACATAGATGATCCGGATCTAGTTGGATCTCATAGAAATCCTCTACCACTTCTAGCTGCAGCCAGAGATATCAATCCATTTTCGTATCTTGAGAACCTTGGTAGAAGTGGCTTTGAAAGCAGTACTGATATAACAAACCGTACACCATTTGTTACTCATCCAAGAGAAGTGAGGGAAATCCCCATAGAGGTCAAGGATGGCAGTCATTCTGACCATGCTCCTAAAATTGATGATGTTACTGGAACAGCAGAGGCATGCGGTCCAGGTGTCAGTGGAACGGTTATAGTTGATGATGACGATGATGATGTTGCAGCTGCCCCAACTGTTTGGACAGGGCAAGGGAGCGGACCAAGAGATAACTCTTCAGGTGATGGATCTCATCACCAGACTTTTGCACCCAGTGCTCCTCGATTTGATGATCCTAGCAATGATATTGAAGAACAAATGATTCGAGCTGCTATTGAGGCTTCAAAACGGGAGGTTGAGGCAAACCACTCAAATCACCAATTTGGTGTACCAAATGAGTTTGATGATATTGAGCCTGAGCAAAGACAGTCTCACCTAGAGGATCCTGAACTTGCACATGTAGTTTCATTGTCACTGAAGACAGCAGAGCAAGAGAAAGCATTCCGCGAGCAGGGGGGAAATGTTAGACCCACAGAGATGGGTGCTTCTAAGGAAGCTGAGGTGGAGCTGGCTAAAGTAGCAGCACCAAATGGAAGCTTGGAGGCAGGAAGCTCATCTATCAGAGATGATACTGAAGATGTGGAGGAGCAACCTCTTGTCAGGCACAGGTCCAGGCGCATGCCTCCTGGGTCTGTGGAGTCTTCCAAAGAATTTGGACCTAGTGAGACTAGCACACCTTCTAGTCCTGGAGAGCAGGATATGGGTAATCATCCTAGTCATGATGGCGGTGCCTTCCCTTCTGACGAGTGGGGAGGCATGTCTTCACAGGAGCATGACGAAGCAGTGATGCTTGAGGCTGCAATGTTTGGTGGAATCCCTGAAGGGTCTGGATATCGCATTCCCTATGCACCTCATCAATTTATGCGACCAGAGAGTCCGTATCCCCTGCCAGTACCTCGTCCCCCATCACCCTCTCTGACGGCACAGCGAATGATACGGGAACAACAGGATGATGAATATCTTGCATCACTGCAAGCTGACAGAGAAAAGGAACTGAAGGCTATTGAGGAAGCTGAAGCTCGTCGCGAAGCAGAAAGACAAGAAGAGGAAGAATCTCGGAGGAAAGTTGAGGAGGAGCAGGAATTGGAGAGACAATTAGCAGCAAAAGAAGCTACTCTCCCTCAAGAACCAGCATCAGATGATGTGAATGCTGTAACCCTTCTGGTGCGAATGCCAGATGGCAGCCGCCATGGTCGTCGATTTCTTAAGACTGATAAGTTGCAGTCTCTTTTCAACTTCATAGATATTGGCAGAAGAGTGAAACCCGGCTCTTACAGAGTGGTGAGGCCGTTCCCTAGGCGTGCTTTCAGCGATGGAGACAGTGCATTGACACTGAATGAACTTGGCCTGACCAGCAAGCAAGAAGCTTTGTTTTTGGAGTTGATATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006810 GO:0008150 GO:0016192 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0051179 GO:0051234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UBA_4 UBX

Protein Analysis

589

Amino Acids

64.61

Weight (kDa)

4.63

Isoelectric Point (pI)

56.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UBA_4	PF14555	6 - 47	7.2e-12	UBA-like domain
UBX	PF00789	509 - 587	1.1e-18	UBX domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009394)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G11740 AT4G11740 AT4G23040
fragaria_vesca	FvH4_5g01560
malus_domestica	MD04G1066700.v1.1 MD06G1073600.v1.1
prunus_persica	Prupe.5G091800_v2.0.a1 Prupe.5G091800_v2.0.a1
pyrus_communis	pycom04g05990 pycom06g07280
rosa_chinensis	RchiOBHm_Chr7g0199121
rosa_laevigata	RLG00000003813
rosa_multiflora	Rmu_sc0006266.1_g000051
rosa_roxburghii	Rroxscaffold_3G00257060
rosa_rugosa	Rorug07G0052800 Rorug07G0052900
rosa_samantha	Rh7AG176300 Rh7BG179800 Rh7CG185400 Rh7DG179300
rosa_wichuraiana	Rw7G015470 Rw7G015500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1254
AccB1I	GGYRCC	2 cut(s)	50, 1109
AccBSI	CCGCTC	1 cut(s)	540
AccII	CGCG	4 cut(s)	71, 73, 828, 1407
AccIII	TCCGGA	1 cut(s)	208
AclWI	GGATC	7 cut(s)	200, 219, 229, 577, 608, 758, 771
AcsI	RAATTY	1 cut(s)	1031
AcuI	CTGAAG	6 cut(s)	543, 818, 975, 1221, 1397, 1416
AcyI	GRCGYC	2 cut(s)	8, 51
AdeI	CACNNNGTG	1 cut(s)	596
AfaI	GTAC	4 cut(s)	319, 337, 711, 1275
AfiI	CCNNNNNNNGG	2 cut(s)	382, 832
AflII	CTTAAG	1 cut(s)	1586
AflIII	ACRYGT	1 cut(s)	778
AgsI	TTSAA	4 cut(s)	311, 632, 666, 1615
AjnI	CCWGG	4 cut(s)	457, 992, 1006, 1066
AleI	CACNNNNGTG	1 cut(s)	149
Alw21I	GWGCWC	1 cut(s)	601
Alw26I	GTCTC	6 cut(s)	158, 756, 1040, 1465, 1611, 1692
AlwI	GGATC	7 cut(s)	200, 219, 229, 577, 608, 758, 771
Ama87I	CYCGRG	1 cut(s)	80
Aor13HI	TCCGGA	1 cut(s)	208
AoxI	GGCC	2 cut(s)	1667, 1726
ApeKI	GCWGC	9 cut(s)	251, 254, 506, 509, 650, 902, 1178, 1481, 1563
ApoI	RAATTY	1 cut(s)	1031
Asp700I	GAANNNNTTC	1 cut(s)	821
AspA2I	CCTAGG	1 cut(s)	1676
AspLEI	GCGC	3 cut(s)	53, 73, 999
AspS9I	GGNCC	4 cut(s)	455, 542, 990, 1037
AsuC2I	CCSGG	1 cut(s)	1647
AsuHPI	GGTGA	7 cut(s)	37, 569, 575, 689, 746, 1281, 1675
AvaI	CYCGRG	1 cut(s)	80
AvaII	GGWCC	4 cut(s)	455, 542, 990, 1037
AvrII	CCTAGG	1 cut(s)	1676
BamHI	GGATCC	1 cut(s)	763
BanI	GGYRCC	2 cut(s)	50, 1109
BbsI	GAAGAC	3 cut(s)	806, 1014, 1134
Bbv12I	GWGCWC	1 cut(s)	601
BbvCI	CCTCAGC	1 cut(s)	879
BbvI	GCAGC	9 cut(s)	238, 266, 496, 518, 637, 914, 1165, 1493, 1575
BccI	CCATC	7 cut(s)	386, 560, 853, 1097, 1294, 1553, 1688
BceAI	ACGGC	2 cut(s)	1317, 1654
BciT130I	CCWGG	4 cut(s)	459, 994, 1008, 1068
BciVI	GTATCC	1 cut(s)	1272
BclI	TGATCA	1 cut(s)	178
BcnI	CCSGG	1 cut(s)	1647
BcoDI	GTCTC	6 cut(s)	158, 756, 1040, 1465, 1611, 1692
BfaI	CTAG	9 cut(s)	215, 248, 618, 758, 1041, 1050, 1062, 1095, 1677
BfmI	CTRYAG	1 cut(s)	252
BfoI	RGCGCY	1 cut(s)	54
BfrI	CTTAAG	1 cut(s)	1586
BfuI	GTATCC	1 cut(s)	1272
BlnI	CCTAGG	1 cut(s)	1676
BmcAI	AGTACT	1 cut(s)	319
Bme1390I	CCNGG	5 cut(s)	459, 994, 1008, 1068, 1647
Bme18I	GGWCC	4 cut(s)	455, 542, 990, 1037
BmeT110I	CYCGRG	1 cut(s)	80
BmgT120I	GGNCC	4 cut(s)	455, 542, 990, 1037
BmiI	GGNNCC	3 cut(s)	52, 765, 1111
BmrFI	CCNGG	5 cut(s)	459, 994, 1008, 1068, 1647
BmrI	ACTGGG	1 cut(s)	588
BmsI	GCATC	4 cut(s)	51, 1158, 1355, 1523
BmuI	ACTGGG	1 cut(s)	588
BpiI	GAAGAC	3 cut(s)	806, 1014, 1134
BplI	GAGNNNNNCTC	2 cut(s)	84, 116
BpmI	CTGGAG	1 cut(s)	1089
Bpu10I	CCTNAGC	2 cut(s)	738, 879
BpuEI	CTTGAG	3 cut(s)	305, 1193, 1488
BpuMI	CCSGG	1 cut(s)	1647
BsaBI	GATNNNNATC	3 cut(s)	210, 267, 1338
BsaHI	GRCGYC	2 cut(s)	8, 51
BsaJI	CCNNGG	4 cut(s)	292, 1007, 1570, 1676
BsaWI	WCCGGW	1 cut(s)	208
Bsc4I	CCNNNNNNNGG	2 cut(s)	382, 832
Bse118I	RCCGGY	1 cut(s)	47
Bse1I	ACTGG	3 cut(s)	439, 594, 1271
Bse3DI	GCAATG	2 cut(s)	628, 1188
Bse8I	GATNNNNATC	3 cut(s)	210, 267, 1338
BseAI	TCCGGA	1 cut(s)	208
BseBI	CCWGG	4 cut(s)	459, 994, 1008, 1068
BseDI	CCNNGG	4 cut(s)	292, 1007, 1570, 1676
BseGI	GGATG	4 cut(s)	352, 397, 1090, 1336
BseJI	GATNNNNATC	3 cut(s)	210, 267, 1338
BseLI	CCNNNNNNNGG	2 cut(s)	382, 832
BseMI	GCAATG	2 cut(s)	628, 1188
BseMII	CTCAG	2 cut(s)	729, 870
BseNI	ACTGG	3 cut(s)	439, 594, 1271
BseRI	GAGGAG	5 cut(s)	98, 591, 980, 1466, 1469
BseXI	GCAGC	9 cut(s)	238, 266, 496, 518, 637, 914, 1165, 1493, 1575
Bsh1236I	CGCG	4 cut(s)	71, 73, 828, 1407
BshFI	GGCC	2 cut(s)	1669, 1728
BshNI	GGYRCC	2 cut(s)	50, 1109
BsiHKAI	GWGCWC	1 cut(s)	601
BsiHKCI	CYCGRG	1 cut(s)	80
BsiSI	CCGG	3 cut(s)	48, 209, 1647
BslFI	GGGAC	1 cut(s)	1266
BslI	CCNNNNNNNGG	2 cut(s)	382, 832
BsmAI	GTCTC	6 cut(s)	158, 756, 1040, 1465, 1611, 1692
BsmFI	GGGAC	1 cut(s)	1266
BsmI	GAATGC	5 cut(s)	121, 821, 1218, 1534, 1557
BsnI	GGCC	2 cut(s)	1669, 1728
BsoBI	CYCGRG	1 cut(s)	80
Bsp1286I	GDGCHC	1 cut(s)	601
Bsp13I	TCCGGA	1 cut(s)	208
Bsp143I	GATC	7 cut(s)	178, 205, 211, 221, 569, 613, 763
Bsp19I	CCATGG	1 cut(s)	1570
Bsp68I	TCGCGA	1 cut(s)	1407
BspANI	GGCC	2 cut(s)	1669, 1728
BspCNI	CTCAG	2 cut(s)	730, 871
BspEI	TCCGGA	1 cut(s)	208
BspFNI	CGCG	4 cut(s)	71, 73, 828, 1407
BspHI	TCATGA	1 cut(s)	1099
BspLI	GGNNCC	3 cut(s)	52, 765, 1111
BspMAI	CTGCAG	1 cut(s)	256
BspPI	GGATC	7 cut(s)	200, 219, 229, 577, 608, 758, 771
BspT107I	GGYRCC	2 cut(s)	50, 1109
BspTI	CTTAAG	1 cut(s)	1586
BsrBI	CCGCTC	1 cut(s)	540
BsrDI	GCAATG	2 cut(s)	628, 1188
BsrFI	RCCGGY	1 cut(s)	47
BsrI	ACTGG	3 cut(s)	439, 594, 1271
BssAI	RCCGGY	1 cut(s)	47
BssECI	CCNNGG	4 cut(s)	292, 1007, 1570, 1676
BssMI	GATC	7 cut(s)	178, 205, 211, 221, 569, 613, 763
BssNI	GRCGYC	2 cut(s)	8, 51
BssT1I	CCWWGG	3 cut(s)	292, 1570, 1676
Bst2UI	CCWGG	4 cut(s)	459, 994, 1008, 1068
Bst4CI	ACNGT	5 cut(s)	335, 475, 520, 750, 1703
Bst6I	CTCTTC	3 cut(s)	562, 1419, 1630
BstACI	GRCGYC	2 cut(s)	8, 51
BstAFI	CTTAAG	1 cut(s)	1586
BstAPI	GCANNNNNTGC	1 cut(s)	596
BstC8I	GCNNGC	7 cut(s)	451, 830, 891, 1001, 1356, 1683, 1739
BstDEI	CTNAG	3 cut(s)	738, 870, 879
BstDSI	CCRYGG	1 cut(s)	1570
BstF5I	GGATG	4 cut(s)	352, 397, 1090, 1336
BstFNI	CGCG	4 cut(s)	71, 73, 828, 1407
BstH2I	RGCGCY	1 cut(s)	54
BstHHI	GCGC	3 cut(s)	53, 73, 999
BstKTI	GATC	7 cut(s)	181, 208, 214, 224, 572, 616, 766
BstMAI	GTCTC	6 cut(s)	158, 756, 1040, 1465, 1611, 1692
BstMBI	GATC	7 cut(s)	178, 205, 211, 221, 569, 613, 763
BstNI	CCWGG	4 cut(s)	459, 994, 1008, 1068
BstNSI	RCATGY	4 cut(s)	453, 782, 1003, 1141
BstSCI	CCNGG	5 cut(s)	457, 992, 1006, 1066, 1645
BstSFI	CTRYAG	1 cut(s)	252
BstUI	CGCG	4 cut(s)	71, 73, 828, 1407
BstV1I	GCAGC	9 cut(s)	238, 266, 496, 518, 637, 914, 1165, 1493, 1575
BstV2I	GAAGAC	3 cut(s)	806, 1014, 1134
BstX2I	RGATCY	4 cut(s)	211, 221, 569, 763
BstXI	CCANNNNNNTGG	2 cut(s)	522, 859
BstYI	RGATCY	4 cut(s)	211, 221, 569, 763
BsuI	GTATCC	1 cut(s)	1272
BsuRI	GGCC	2 cut(s)	1669, 1728
BtgI	CCRYGG	1 cut(s)	1570
BtgZI	GCGATG	1 cut(s)	1707
BtsCI	GGATG	4 cut(s)	352, 397, 1090, 1336
BtsI	GCAGTG	2 cut(s)	1170, 1349
BtsIMutI	CAGTG	9 cut(s)	133, 156, 472, 601, 794, 1170, 1349, 1708, 1712
BtuMI	TCGCGA	1 cut(s)	1407
Cac8I	GCNNGC	7 cut(s)	451, 830, 891, 1001, 1356, 1683, 1739
CciI	TCATGA	1 cut(s)	1099
CfoI	GCGC	3 cut(s)	53, 73, 999
Cfr10I	RCCGGY	1 cut(s)	47
Cfr13I	GGNCC	4 cut(s)	455, 542, 990, 1037
CseI	GACGC	1 cut(s)	16
Csp6I	GTAC	4 cut(s)	318, 336, 710, 1274
CviQI	GTAC	4 cut(s)	318, 336, 710, 1274
DdeI	CTNAG	3 cut(s)	738, 870, 879
DinI	GGCGCC	1 cut(s)	52
DpnI	GATC	7 cut(s)	180, 207, 213, 223, 571, 615, 765
DpnII	GATC	7 cut(s)	178, 205, 211, 221, 569, 613, 763
DraIII	CACNNNGTG	1 cut(s)	596
DrdI	GACNNNNNNGTC	1 cut(s)	1254
DseDI	GACNNNNNNGTC	1 cut(s)	1254
Eam1104I	CTCTTC	3 cut(s)	562, 1419, 1630
EarI	CTCTTC	3 cut(s)	562, 1419, 1630
Eco130I	CCWWGG	3 cut(s)	292, 1570, 1676
Eco32I	GATATC	2 cut(s)	265, 1214
Eco47I	GGWCC	4 cut(s)	455, 542, 990, 1037
Eco57I	CTGAAG	6 cut(s)	543, 818, 975, 1221, 1397, 1416
Eco88I	CYCGRG	1 cut(s)	80
EcoRII	CCWGG	4 cut(s)	457, 992, 1006, 1066
EcoRV	GATATC	2 cut(s)	265, 1214
EcoT14I	CCWWGG	3 cut(s)	292, 1570, 1676
EcoT22I	ATGCAT	1 cut(s)	121
EgeI	GGCGCC	1 cut(s)	52
EheI	GGCGCC	1 cut(s)	52
ErhI	CCWWGG	3 cut(s)	292, 1570, 1676
FaqI	GGGAC	1 cut(s)	1266
FbaI	TGATCA	1 cut(s)	178
FokI	GGATG	4 cut(s)	339, 404, 1077, 1343
FspBI	CTAG	9 cut(s)	215, 248, 618, 758, 1041, 1050, 1062, 1095, 1677
GlaI	GCGC	3 cut(s)	52, 72, 998
GsuI	CTGGAG	1 cut(s)	1089
HaeII	RGCGCY	1 cut(s)	54
HaeIII	GGCC	2 cut(s)	1669, 1728
HapII	CCGG	3 cut(s)	48, 209, 1647
HgaI	GACGC	1 cut(s)	16
HhaI	GCGC	3 cut(s)	53, 73, 999
Hin1I	GRCGYC	2 cut(s)	8, 51
Hin6I	GCGC	3 cut(s)	51, 71, 997
HinP1I	GCGC	3 cut(s)	51, 71, 997
HindIII	AAGCTT	2 cut(s)	916, 1746
HinfI	GANTC	5 cut(s)	643, 1019, 1194, 1255, 1433
HpaII	CCGG	3 cut(s)	48, 209, 1647
HphI	GGTGA	7 cut(s)	37, 569, 575, 689, 746, 1281, 1675
Hpy166II	GTNNAC	2 cut(s)	338, 710
Hpy188I	TCNGA	6 cut(s)	406, 944, 1123, 1299, 1440, 1519
Hpy8I	GTNNAC	2 cut(s)	338, 710
Hpy99I	CGWCG	3 cut(s)	10, 1407, 1581
HpyAV	CCTTC	8 cut(s)	43, 125, 1068, 1123, 1128, 1196, 1372, 1550
HpyCH4III	ACNGT	5 cut(s)	335, 475, 520, 750, 1703
HpyF3I	CTNAG	3 cut(s)	738, 870, 879
Hsp92I	GRCGYC	2 cut(s)	8, 51
HspAI	GCGC	3 cut(s)	51, 71, 997
KasI	GGCGCC	1 cut(s)	50
Kpn2I	TCCGGA	1 cut(s)	208
Ksp22I	TGATCA	1 cut(s)	178
Kzo9I	GATC	7 cut(s)	178, 205, 211, 221, 569, 613, 763
LmnI	GCTCC	8 cut(s)	85, 418, 537, 604, 886, 967, 1150, 1456
Lsp1109I	GCAGC	9 cut(s)	238, 266, 496, 518, 637, 914, 1165, 1493, 1575
LweI	GCATC	4 cut(s)	51, 1158, 1355, 1523
MaeI	CTAG	9 cut(s)	215, 248, 618, 758, 1041, 1050, 1062, 1095, 1677
MaeIII	GTNAC	4 cut(s)	346, 430, 792, 1534
MalI	GATC	7 cut(s)	180, 207, 213, 223, 571, 615, 765
MbiI	CCGCTC	1 cut(s)	540
MboI	GATC	7 cut(s)	178, 205, 211, 221, 569, 613, 763
MboII	GAAGA	9 cut(s)	549, 644, 811, 968, 1014, 1134, 1436, 1442, 1647
MflI	RGATCY	4 cut(s)	211, 221, 569, 763
MhlI	GDGCHC	1 cut(s)	601
MluCI	AATT	6 cut(s)	420, 701, 1031, 1238, 1463, 1475
Mly113I	GGCGCC	1 cut(s)	51
MlyI	GAGTC	2 cut(s)	1028, 1264
MmeI	TCCRAC	1 cut(s)	199
Mph1103I	ATGCAT	1 cut(s)	121
MroI	TCCGGA	1 cut(s)	208
MroXI	GAANNNNTTC	1 cut(s)	821
MseI	TTAA	1 cut(s)	1587
MslI	CAYNNNNRTG	2 cut(s)	149, 857
MspA1I	CMGCKG	1 cut(s)	509
MspCI	CTTAAG	1 cut(s)	1586
MspI	CCGG	3 cut(s)	48, 209, 1647
MspR9I	CCNGG	5 cut(s)	459, 994, 1008, 1068, 1647
Mva1269I	GAATGC	5 cut(s)	121, 821, 1218, 1534, 1557
MvaI	CCWGG	4 cut(s)	459, 994, 1008, 1068
MvnI	CGCG	4 cut(s)	71, 73, 828, 1407
NarI	GGCGCC	1 cut(s)	51
NciI	CCSGG	1 cut(s)	1647
NcoI	CCATGG	1 cut(s)	1570
NdeII	GATC	7 cut(s)	178, 205, 211, 221, 569, 613, 763
NlaIV	GGNNCC	3 cut(s)	52, 765, 1111
NmuCI	GTSAC	1 cut(s)	792
NruI	TCGCGA	1 cut(s)	1407
NsiI	ATGCAT	1 cut(s)	121
NspI	RCATGY	4 cut(s)	453, 782, 1003, 1141
OliI	CACNNNNGTG	1 cut(s)	149
PaeI	GCATGC	2 cut(s)	453, 1003
PaeR7I	CTCGAG	1 cut(s)	80
PagI	TCATGA	1 cut(s)	1099
PciI	ACATGT	1 cut(s)	778
PctI	GAATGC	5 cut(s)	121, 821, 1218, 1534, 1557
PdmI	GAANNNNTTC	1 cut(s)	821
PfeI	GAWTC	3 cut(s)	643, 1194, 1433
PfoI	TCCNGGA	1 cut(s)	1066
PleI	GAGTC	2 cut(s)	1027, 1263
PluTI	GGCGCC	1 cut(s)	54
PpsI	GAGTC	2 cut(s)	1027, 1263
PscI	ACATGT	1 cut(s)	778
Psp6I	CCWGG	4 cut(s)	457, 992, 1006, 1066
PspGI	CCWGG	4 cut(s)	457, 992, 1006, 1066
PspN4I	GGNNCC	3 cut(s)	52, 765, 1111
PspPI	GGNCC	4 cut(s)	455, 542, 990, 1037
PspXI	VCTCGAGB	1 cut(s)	80
PstI	CTGCAG	1 cut(s)	256
PsuI	RGATCY	4 cut(s)	211, 221, 569, 763
PvuII	CAGCTG	1 cut(s)	509
RruI	TCGCGA	1 cut(s)	1407
RsaI	GTAC	4 cut(s)	319, 337, 711, 1275
RsaNI	GTAC	4 cut(s)	318, 336, 710, 1274
RseI	CAYNNNNRTG	2 cut(s)	149, 857
SaqAI	TTAA	1 cut(s)	1587
Sau3AI	GATC	7 cut(s)	178, 205, 211, 221, 569, 613, 763
Sau96I	GGNCC	4 cut(s)	455, 542, 990, 1037
ScaI	AGTACT	1 cut(s)	319
SchI	GAGTC	2 cut(s)	1028, 1264
ScrFI	CCNGG	5 cut(s)	459, 994, 1008, 1068, 1647
SduI	GDGCHC	1 cut(s)	601
SfaNI	GCATC	4 cut(s)	51, 1158, 1355, 1523
SfcI	CTRYAG	1 cut(s)	252
SfoI	GGCGCC	1 cut(s)	52
Sfr274I	CTCGAG	1 cut(s)	80
SgrAI	CRCCGGYG	1 cut(s)	47
SinI	GGWCC	4 cut(s)	455, 542, 990, 1037
SlaI	CTCGAG	1 cut(s)	80
SmiMI	CAYNNNNRTG	2 cut(s)	149, 857
SmlI	CTYRAG	5 cut(s)	80, 284, 1172, 1503, 1586
SmoI	CTYRAG	5 cut(s)	80, 284, 1172, 1503, 1586
SphI	GCATGC	2 cut(s)	453, 1003
Sse9I	AATT	6 cut(s)	420, 701, 1031, 1238, 1463, 1475
SspDI	GGCGCC	1 cut(s)	50
SspMI	CTAG	9 cut(s)	215, 248, 618, 758, 1041, 1050, 1062, 1095, 1677
StyD4I	CCNGG	5 cut(s)	457, 992, 1006, 1066, 1645
StyI	CCWWGG	3 cut(s)	292, 1570, 1676
TaaI	ACNGT	5 cut(s)	335, 475, 520, 750, 1703
TaqI	TCGA	5 cut(s)	27, 81, 604, 646, 1579
TasI	AATT	6 cut(s)	420, 701, 1031, 1238, 1463, 1475
TatI	WGTACW	1 cut(s)	317
TauI	GCSGC	5 cut(s)	62, 65, 68, 71, 1569
TfiI	GAWTC	3 cut(s)	643, 1194, 1433
Tru1I	TTAA	1 cut(s)	1587
Tru9I	TTAA	1 cut(s)	1587
TscAI	CASTG	9 cut(s)	133, 156, 472, 601, 801, 1170, 1356, 1708, 1719
TseFI	GTSAC	1 cut(s)	792
TseI	GCWGC	9 cut(s)	251, 254, 506, 509, 650, 902, 1178, 1481, 1563
Tsp45I	GTSAC	1 cut(s)	792
TspDTI	ATGAA	7 cut(s)	25, 120, 181, 777, 1350, 1609, 1734
TspGWI	ACGGA	1 cut(s)	1248
TspRI	CASTG	9 cut(s)	133, 156, 472, 601, 801, 1170, 1356, 1708, 1719
Vha464I	CTTAAG	1 cut(s)	1586
VpaK11BI	GGWCC	4 cut(s)	455, 542, 990, 1037
XapI	RAATTY	1 cut(s)	1031
XceI	RCATGY	4 cut(s)	453, 782, 1003, 1141
XhoI	CTCGAG	1 cut(s)	80
XmaJI	CCTAGG	1 cut(s)	1676
XmnI	GAANNNNTTC	1 cut(s)	821
XspI	CTAG	9 cut(s)	215, 248, 618, 758, 1041, 1050, 1062, 1095, 1677
ZrmI	AGTACT	1 cut(s)	319
Zsp2I	ATGCAT	1 cut(s)	121

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.